View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17488_low_18 (Length: 245)
Name: NF17488_low_18
Description: NF17488
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17488_low_18 |
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Alignment Details
Target: chr5 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 19558998 - 19559122
Alignment:
| Q |
3 |
actgaaccaggctacttcaaaagatgacactaaagaatatttatcagaaatgatatttttgacaacacaaatgttgccatgacaccatataatgacaatg |
102 |
Q |
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| T |
19558998 |
actgaaccaggctacttcaaaagatgacactaaagaatatttatcagaaatgatatttttgacaacacaaatgttgccatgacaccatataatgacaatg |
19559097 |
T |
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| Q |
103 |
ttgtgggtttttctattgaactttc |
127 |
Q |
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| T |
19559098 |
ttgtgggtttttctattgaactttc |
19559122 |
T |
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