View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17490_high_1 (Length: 380)

Name: NF17490_high_1
Description: NF17490
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17490_high_1
NF17490_high_1
[»] chr6 (46 HSPs)
chr6 (16-354)||(19704825-19705163)
chr6 (16-354)||(2629141-2629477)
chr6 (55-354)||(18317753-18318051)
chr6 (16-354)||(12195771-12196102)
chr6 (16-354)||(30034859-30035194)
chr6 (18-354)||(26932820-26933156)
chr6 (16-354)||(30966925-30967259)
chr6 (155-354)||(5275727-5275926)
chr6 (65-354)||(17011781-17012059)
chr6 (24-348)||(17852275-17852592)
chr6 (47-354)||(22858238-22858534)
chr6 (90-354)||(20526548-20526800)
chr6 (190-276)||(30445318-30445404)
chr6 (16-100)||(28241577-28241655)
chr6 (16-94)||(14459021-14459093)
chr6 (16-96)||(20915612-20915688)
chr6 (16-100)||(1230505-1230583)
chr6 (16-96)||(14507431-14507505)
chr6 (16-100)||(26064961-26065044)
chr6 (16-100)||(26084930-26085013)
chr6 (16-121)||(15532937-15533036)
chr6 (18-96)||(15541398-15541470)
chr6 (16-96)||(8995463-8995537)
chr6 (16-96)||(9019910-9019984)
chr6 (16-96)||(11983285-11983359)
chr6 (16-96)||(19227664-19227738)
chr6 (16-96)||(4816487-4816575)
chr6 (190-276)||(30443111-30443195)
chr6 (16-96)||(1072133-1072207)
chr6 (16-96)||(24338704-24338778)
chr6 (16-96)||(32447572-32447646)
chr6 (18-96)||(13057178-13057250)
chr6 (16-55)||(25477293-25477332)
chr6 (16-96)||(15530378-15530452)
chr6 (16-55)||(3390398-3390437)
chr6 (16-96)||(3632194-3632268)
chr6 (47-96)||(26066309-26066358)
chr6 (47-96)||(26068580-26068629)
chr6 (47-96)||(29754977-29755026)
chr6 (23-55)||(15719673-15719705)
chr6 (16-55)||(3630120-3630159)
chr6 (299-342)||(12158532-12158575)
chr6 (16-54)||(3233987-3234025)
chr6 (18-55)||(13039773-13039810)
chr6 (16-55)||(22490658-22490698)
chr6 (301-346)||(30443022-30443069)
[»] chr5 (68 HSPs)
chr5 (16-380)||(27912195-27912559)
chr5 (16-380)||(18468674-18469034)
chr5 (16-354)||(25803709-25804048)
chr5 (16-360)||(27910131-27910473)
chr5 (24-356)||(18511476-18511802)
chr5 (24-380)||(18509582-18509931)
chr5 (16-336)||(10586549-10586865)
chr5 (16-354)||(15551927-15552268)
chr5 (47-354)||(3373322-3373628)
chr5 (16-380)||(26098507-26098865)
chr5 (16-354)||(26097423-26097756)
chr5 (16-276)||(18466453-18466707)
chr5 (30-354)||(18596328-18596656)
chr5 (173-354)||(21288531-21288713)
chr5 (71-276)||(15143262-15143461)
chr5 (204-349)||(17415748-17415893)
chr5 (16-100)||(4410002-4410084)
chr5 (16-223)||(40221340-40221545)
chr5 (24-144)||(6661446-6661560)
chr5 (252-354)||(6661929-6662031)
chr5 (16-100)||(6747249-6747329)
chr5 (16-100)||(10529355-10529433)
chr5 (16-96)||(25921729-25921803)
chr5 (16-96)||(31542684-31542758)
chr5 (16-100)||(39854429-39854506)
chr5 (24-145)||(41585970-41586086)
chr5 (16-96)||(1189865-1189944)
chr5 (16-96)||(2818592-2818666)
chr5 (16-96)||(20507718-20507792)
chr5 (16-96)||(31545029-31545103)
chr5 (16-96)||(38882054-38882129)
chr5 (16-96)||(21684707-21684791)
chr5 (16-96)||(2174868-2174942)
chr5 (16-96)||(4236578-4236652)
chr5 (16-96)||(31179627-31179701)
chr5 (297-354)||(40221284-40221341)
chr5 (16-91)||(16776112-16776181)
chr5 (302-354)||(18466413-18466465)
chr5 (16-100)||(6745006-6745092)
chr5 (16-59)||(34477310-34477353)
chr5 (16-59)||(34479675-34479718)
chr5 (24-96)||(12556187-12556253)
chr5 (302-351)||(15143225-15143274)
chr5 (16-96)||(16092456-16092534)
chr5 (16-96)||(17072832-17072906)
chr5 (16-96)||(20042999-20043073)
chr5 (16-96)||(25904052-25904126)
chr5 (24-96)||(36402592-36402658)
chr5 (16-55)||(31472869-31472908)
chr5 (54-96)||(15354770-15354812)
chr5 (54-96)||(15357046-15357088)
chr5 (16-96)||(10474579-10474653)
chr5 (56-96)||(23665087-23665127)
chr5 (56-96)||(23667362-23667402)
chr5 (56-96)||(23793460-23793500)
chr5 (16-55)||(695873-695912)
chr5 (16-55)||(6756478-6756517)
chr5 (16-55)||(34530922-34530961)
chr5 (17-95)||(37706037-37706109)
chr5 (16-55)||(39398249-39398287)
chr5 (190-232)||(6661594-6661636)
chr5 (23-89)||(4897674-4897742)
chr5 (88-145)||(5778979-5779036)
chr5 (297-346)||(5779168-5779217)
chr5 (63-96)||(38960339-38960372)
chr5 (64-96)||(10757213-10757245)
chr5 (56-96)||(23742055-23742095)
chr5 (203-276)||(32520241-32520316)
[»] scaffold0511 (1 HSPs)
scaffold0511 (16-354)||(1737-2074)
[»] chr7 (78 HSPs)
chr7 (16-354)||(7094678-7095013)
chr7 (24-380)||(7092439-7092792)
chr7 (16-378)||(7470278-7470643)
chr7 (16-380)||(7349529-7349891)
chr7 (16-354)||(3035417-3035754)
chr7 (31-380)||(20299131-20299476)
chr7 (16-354)||(1849667-1850014)
chr7 (16-380)||(28487225-28487586)
chr7 (16-351)||(20625739-20626071)
chr7 (16-351)||(20629630-20629962)
chr7 (16-351)||(20642049-20642381)
chr7 (16-354)||(7472236-7472572)
chr7 (16-354)||(7351908-7352244)
chr7 (16-380)||(31156167-31156524)
chr7 (31-354)||(11756927-11757246)
chr7 (47-354)||(1606173-1606478)
chr7 (16-354)||(28485263-28485599)
chr7 (16-354)||(38393685-38394019)
chr7 (16-354)||(18345239-18345574)
chr7 (47-380)||(38395962-38396294)
chr7 (16-348)||(24258166-24258496)
chr7 (16-354)||(37412384-37412714)
chr7 (24-354)||(42331263-42331591)
chr7 (24-354)||(21989855-21990175)
chr7 (85-354)||(21470614-21470881)
chr7 (16-284)||(13099732-13099993)
chr7 (156-354)||(47865330-47865528)
chr7 (24-276)||(43253780-43254035)
chr7 (16-252)||(20297163-20297395)
chr7 (27-354)||(3676999-3677301)
chr7 (208-354)||(443328-443474)
chr7 (190-353)||(40281824-40281989)
chr7 (16-100)||(48457604-48457686)
chr7 (16-96)||(44523-44597)
chr7 (16-145)||(443504-443628)
chr7 (16-96)||(1049551-1049625)
chr7 (16-90)||(3878540-3878610)
chr7 (16-96)||(27306485-27306559)
chr7 (16-100)||(40946279-40946361)
chr7 (16-96)||(35588-35662)
chr7 (16-96)||(9680773-9680852)
chr7 (190-276)||(12310442-12310528)
chr7 (16-96)||(18567572-18567646)
chr7 (16-96)||(31435303-31435377)
chr7 (77-145)||(40281688-40281756)
chr7 (16-96)||(40836998-40837072)
chr7 (27-96)||(22392432-22392495)
chr7 (297-346)||(20297108-20297157)
chr7 (16-96)||(25542490-25542563)
chr7 (24-121)||(7188476-7188568)
chr7 (16-55)||(11355252-11355291)
chr7 (16-55)||(20137365-20137404)
chr7 (16-55)||(21678060-21678099)
chr7 (16-55)||(21680021-21680060)
chr7 (16-55)||(26804563-26804602)
chr7 (32-96)||(9679013-9679076)
chr7 (87-145)||(10691025-10691083)
chr7 (16-96)||(22251798-22251872)
chr7 (298-346)||(10690684-10690732)
chr7 (16-59)||(1047180-1047223)
chr7 (229-276)||(12484976-12485023)
chr7 (229-276)||(12506407-12506454)
chr7 (16-55)||(22828889-22828928)
chr7 (16-59)||(38396306-38396349)
chr7 (16-55)||(44724573-44724612)
chr7 (302-348)||(43254023-43254069)
chr7 (181-262)||(10690773-10690854)
chr7 (56-96)||(22108120-22108160)
chr7 (56-96)||(22137131-22137171)
chr7 (23-55)||(24465543-24465575)
chr7 (56-96)||(40549880-40549920)
chr7 (56-96)||(40552158-40552198)
chr7 (24-55)||(4296199-4296230)
chr7 (229-276)||(12657600-12657647)
chr7 (16-55)||(21592399-21592438)
chr7 (16-51)||(24748592-24748627)
chr7 (63-96)||(9027401-9027434)
chr7 (64-96)||(2935312-2935344)
[»] chr8 (48 HSPs)
chr8 (16-354)||(608472-608813)
chr8 (16-354)||(43529873-43530207)
chr8 (16-354)||(28283475-28283811)
chr8 (16-351)||(15808967-15809298)
chr8 (16-354)||(3873752-3874089)
chr8 (24-380)||(41384469-41384815)
chr8 (24-354)||(41382421-41382744)
chr8 (198-354)||(32339096-32339252)
chr8 (16-205)||(181434-181616)
chr8 (16-145)||(24873437-24873567)
chr8 (16-145)||(32339260-32339388)
chr8 (239-354)||(3265635-3265750)
chr8 (16-100)||(22684912-22685000)
chr8 (16-96)||(14807756-14807830)
chr8 (16-96)||(12517280-12517356)
chr8 (16-96)||(3886174-3886248)
chr8 (16-96)||(4424023-4424097)
chr8 (16-96)||(15072715-15072789)
chr8 (16-96)||(18810713-18810787)
chr8 (16-96)||(27826991-27827065)
chr8 (16-96)||(27829302-27829376)
chr8 (16-96)||(44720848-44720922)
chr8 (16-115)||(14419447-14419541)
chr8 (16-96)||(18812898-18812972)
chr8 (16-96)||(26775206-26775280)
chr8 (190-276)||(11701364-11701447)
chr8 (9-96)||(35872627-35872708)
chr8 (16-96)||(13858740-13858814)
chr8 (16-96)||(14477281-14477355)
chr8 (16-96)||(33541644-33541718)
chr8 (16-55)||(5622994-5623033)
chr8 (202-273)||(13986214-13986285)
chr8 (16-55)||(25952561-25952600)
chr8 (16-55)||(27107153-27107192)
chr8 (16-55)||(37214466-37214505)
chr8 (16-59)||(43082009-43082052)
chr8 (16-54)||(36865579-36865617)
chr8 (16-55)||(1225206-1225245)
chr8 (16-55)||(15068021-15068060)
chr8 (300-346)||(13986328-13986374)
chr8 (302-346)||(11701435-11701479)
chr8 (16-55)||(5372434-5372472)
chr8 (24-55)||(27911055-27911086)
chr8 (24-55)||(27957474-27957505)
chr8 (16-55)||(30480759-30480798)
chr8 (16-59)||(43079639-43079681)
chr8 (297-346)||(30679208-30679256)
chr8 (23-55)||(21480554-21480586)
[»] chr1 (85 HSPs)
chr1 (16-380)||(31735779-31736139)
chr1 (16-354)||(47905958-47906293)
chr1 (16-354)||(15295092-15295437)
chr1 (16-354)||(9463502-9463838)
chr1 (16-354)||(24325349-24325686)
chr1 (16-354)||(39931764-39932096)
chr1 (16-354)||(9459675-9460011)
chr1 (16-324)||(21948445-21948751)
chr1 (16-380)||(27337196-27337556)
chr1 (16-354)||(27339388-27339728)
chr1 (16-354)||(17324894-17325225)
chr1 (16-354)||(48664854-48665200)
chr1 (24-354)||(28998519-28998842)
chr1 (24-354)||(29004235-29004558)
chr1 (24-351)||(2949497-2949810)
chr1 (171-354)||(6115532-6115716)
chr1 (166-354)||(45693834-45694022)
chr1 (164-354)||(4131690-4131880)
chr1 (17-234)||(2510583-2510801)
chr1 (47-244)||(46432011-46432207)
chr1 (168-380)||(6997190-6997395)
chr1 (158-318)||(6996067-6996221)
chr1 (65-222)||(26520419-26520580)
chr1 (241-354)||(46432521-46432634)
chr1 (203-354)||(16561133-16561284)
chr1 (190-276)||(11693580-11693666)
chr1 (74-217)||(6115395-6115541)
chr1 (190-276)||(13785662-13785748)
chr1 (16-96)||(47177307-47177385)
chr1 (16-96)||(47179658-47179736)
chr1 (73-273)||(14352759-14352946)
chr1 (16-96)||(28842442-28842518)
chr1 (16-94)||(20302410-20302482)
chr1 (16-100)||(2617461-2617539)
chr1 (16-96)||(51749988-51750062)
chr1 (23-146)||(16561367-16561490)
chr1 (16-102)||(25127808-25127895)
chr1 (16-96)||(28840627-28840703)
chr1 (16-89)||(6822971-6823038)
chr1 (16-96)||(12302763-12302842)
chr1 (16-96)||(13215030-13215104)
chr1 (16-96)||(13761786-13761860)
chr1 (16-96)||(41646869-41646943)
chr1 (16-126)||(6995958-6996063)
chr1 (97-273)||(10115572-10115738)
chr1 (16-89)||(6823840-6823908)
chr1 (16-96)||(15823495-15823569)
chr1 (16-96)||(16231550-16231624)
chr1 (16-96)||(28207324-28207398)
chr1 (16-96)||(38925736-38925810)
chr1 (16-96)||(51752314-51752388)
chr1 (24-95)||(10400094-10400159)
chr1 (226-276)||(32260833-32260883)
chr1 (16-96)||(16226116-16226190)
chr1 (16-96)||(20291406-20291480)
chr1 (297-346)||(32260746-32260795)
chr1 (16-96)||(47451597-47451671)
chr1 (16-95)||(18307059-18307132)
chr1 (16-91)||(25248772-25248841)
chr1 (16-94)||(17186386-17186458)
chr1 (16-55)||(17318877-17318916)
chr1 (16-55)||(31423132-31423171)
chr1 (18-100)||(39462464-39462540)
chr1 (237-283)||(13112047-13112093)
chr1 (16-54)||(16428638-16428676)
chr1 (16-96)||(25251533-25251607)
chr1 (16-55)||(18839571-18839610)
chr1 (24-95)||(26613503-26613571)
chr1 (16-55)||(31425277-31425316)
chr1 (27-96)||(49495468-49495531)
chr1 (16-57)||(4131637-4131678)
chr1 (16-96)||(11457733-11457807)
chr1 (22-55)||(50079085-50079118)
chr1 (23-55)||(6115344-6115376)
chr1 (77-141)||(32260950-32261014)
chr1 (299-346)||(11693706-11693753)
chr1 (98-129)||(13785580-13785611)
chr1 (16-55)||(31489899-31489938)
chr1 (16-47)||(46431965-46431996)
chr1 (297-346)||(13785786-13785835)
chr1 (63-96)||(23783500-23783533)
chr1 (16-52)||(6756514-6756550)
chr1 (306-346)||(10115466-10115506)
chr1 (72-100)||(13449856-13449884)
chr1 (16-48)||(16432396-16432428)
[»] chr3 (83 HSPs)
chr3 (16-354)||(746424-746760)
chr3 (16-380)||(457926-458287)
chr3 (16-354)||(4104149-4104481)
chr3 (16-354)||(25533109-25533445)
chr3 (16-354)||(455575-455910)
chr3 (16-380)||(42991929-42992289)
chr3 (16-354)||(10621784-10622125)
chr3 (26-380)||(53915760-53916106)
chr3 (16-354)||(51943044-51943374)
chr3 (24-354)||(41848806-41849147)
chr3 (32-354)||(1313084-1313397)
chr3 (24-354)||(27635889-27636210)
chr3 (16-354)||(42989954-42990307)
chr3 (24-351)||(53917926-53918245)
chr3 (16-146)||(6561689-6561813)
chr3 (16-100)||(4308535-4308613)
chr3 (16-100)||(27101435-27101517)
chr3 (16-100)||(9604861-9604944)
chr3 (16-96)||(6063700-6063776)
chr3 (18-96)||(10084645-10084721)
chr3 (16-96)||(11170333-11170407)
chr3 (16-100)||(51727260-51727338)
chr3 (18-96)||(10191565-10191641)
chr3 (16-96)||(38889968-38890043)
chr3 (16-93)||(11163082-11163153)
chr3 (16-96)||(3859457-3859531)
chr3 (16-96)||(5522869-5522943)
chr3 (16-100)||(35918203-35918281)
chr3 (16-100)||(43226011-43226089)
chr3 (16-100)||(50493924-50494002)
chr3 (190-273)||(11066346-11066429)
chr3 (19-96)||(1321370-1321441)
chr3 (297-354)||(6561615-6561672)
chr3 (16-100)||(24979632-24979710)
chr3 (16-96)||(26720477-26720551)
chr3 (16-100)||(43228216-43228294)
chr3 (16-96)||(6066050-6066125)
chr3 (201-273)||(54287487-54287559)
chr3 (70-145)||(11072825-11072900)
chr3 (18-96)||(22114561-22114633)
chr3 (16-90)||(18099424-18099493)
chr3 (206-271)||(53974011-53974077)
chr3 (16-96)||(5191582-5191656)
chr3 (22-96)||(6719357-6719439)
chr3 (16-96)||(15780789-15780863)
chr3 (16-96)||(35777350-35777424)
chr3 (16-96)||(45882868-45882942)
chr3 (16-96)||(18097154-18097229)
chr3 (16-59)||(30005801-30005844)
chr3 (206-276)||(11072731-11072801)
chr3 (16-96)||(47149149-47149228)
chr3 (16-96)||(1626937-1627011)
chr3 (16-96)||(10958577-10958651)
chr3 (16-100)||(32219020-32219098)
chr3 (16-96)||(10956281-10956355)
chr3 (46-100)||(27101540-27101592)
chr3 (16-55)||(28102256-28102295)
chr3 (16-55)||(28137549-28137588)
chr3 (16-59)||(38210330-38210373)
chr3 (63-100)||(25690651-25690688)
chr3 (47-100)||(29956589-29956642)
chr3 (47-100)||(30005744-30005797)
chr3 (16-96)||(32264293-32264371)
chr3 (16-96)||(47701849-47701923)
chr3 (297-346)||(53974148-53974197)
chr3 (23-59)||(29956646-29956682)
chr3 (16-55)||(28100295-28100334)
chr3 (16-55)||(43423717-43423756)
chr3 (16-55)||(51675009-51675048)
chr3 (61-100)||(53896489-53896528)
chr3 (71-145)||(11066469-11066543)
chr3 (300-346)||(11072644-11072690)
chr3 (16-96)||(28761682-28761756)
chr3 (16-96)||(43421669-43421743)
chr3 (23-121)||(1618916-1619012)
chr3 (16-55)||(3314648-3314687)
chr3 (229-276)||(5535882-5535929)
chr3 (16-55)||(5927018-5927057)
chr3 (16-55)||(6231413-6231452)
chr3 (23-96)||(3306728-3306795)
chr3 (16-54)||(53468709-53468747)
chr3 (78-116)||(53973898-53973936)
chr3 (65-121)||(53597144-53597201)
[»] chr4 (87 HSPs)
chr4 (16-378)||(22132646-22133009)
chr4 (16-380)||(14787687-14788045)
chr4 (16-354)||(17662490-17662824)
chr4 (16-354)||(24347961-24348295)
chr4 (16-354)||(22134871-22135217)
chr4 (16-354)||(44600094-44600426)
chr4 (24-380)||(5100719-5101066)
chr4 (24-354)||(56030191-56030513)
chr4 (73-340)||(30136331-30136596)
chr4 (24-249)||(19322547-19322766)
chr4 (16-225)||(53405001-53405207)
chr4 (206-354)||(47211158-47211306)
chr4 (71-354)||(10112628-10112899)
chr4 (115-354)||(38890478-38890699)
chr4 (16-181)||(47210996-47211160)
chr4 (71-354)||(9022062-9022335)
chr4 (16-145)||(18709419-18709551)
chr4 (202-354)||(9863501-9863650)
chr4 (16-100)||(8631675-8631757)
chr4 (16-96)||(38409202-38409282)
chr4 (73-276)||(54928982-54929180)
chr4 (16-96)||(5637721-5637799)
chr4 (16-96)||(5198423-5198497)
chr4 (16-100)||(6764838-6764916)
chr4 (16-96)||(24888799-24888873)
chr4 (16-100)||(40637073-40637151)
chr4 (16-96)||(7941322-7941398)
chr4 (16-96)||(9148254-9148330)
chr4 (197-276)||(10979676-10979755)
chr4 (16-96)||(11006493-11006571)
chr4 (16-96)||(11434958-11435032)
chr4 (16-96)||(11008822-11008900)
chr4 (16-96)||(36919841-36919917)
chr4 (16-96)||(37089627-37089704)
chr4 (297-354)||(14789512-14789569)
chr4 (16-96)||(22044646-22044720)
chr4 (16-96)||(22802990-22803064)
chr4 (16-96)||(47274730-47274804)
chr4 (16-100)||(47868400-47868478)
chr4 (16-96)||(48486322-48486396)
chr4 (16-96)||(51015249-51015323)
chr4 (16-100)||(2485128-2485207)
chr4 (16-96)||(619703-619777)
chr4 (16-96)||(9174402-9174476)
chr4 (16-96)||(9176730-9176804)
chr4 (16-96)||(16934399-16934473)
chr4 (16-96)||(18847156-18847230)
chr4 (16-96)||(22046941-22047015)
chr4 (24-96)||(22801126-22801192)
chr4 (16-96)||(40091671-40091745)
chr4 (9-96)||(24446828-24446909)
chr4 (16-93)||(36921750-36921822)
chr4 (255-354)||(19322410-19322510)
chr4 (190-346)||(38209098-38209259)
chr4 (16-100)||(14633319-14633396)
chr4 (16-96)||(16932045-16932119)
chr4 (16-95)||(16453313-16453386)
chr4 (16-96)||(31849855-31849929)
chr4 (214-273)||(29609838-29609897)
chr4 (16-55)||(37313322-37313361)
chr4 (16-54)||(2891356-2891394)
chr4 (32-96)||(13543957-13544020)
chr4 (16-96)||(24878992-24879066)
chr4 (16-96)||(36378295-36378369)
chr4 (16-100)||(52942702-52942781)
chr4 (16-96)||(3824826-3824903)
chr4 (16-55)||(3937465-3937504)
chr4 (225-276)||(5516701-5516752)
chr4 (16-59)||(22780629-22780672)
chr4 (16-59)||(22782994-22783037)
chr4 (16-55)||(33415743-33415782)
chr4 (16-55)||(38928434-38928473)
chr4 (23-96)||(25357640-25357713)
chr4 (24-96)||(19095885-19095951)
chr4 (16-96)||(38270242-38270316)
chr4 (71-107)||(9863700-9863736)
chr4 (86-145)||(29609767-29609823)
chr4 (16-55)||(12396101-12396140)
chr4 (16-55)||(12401063-12401102)
chr4 (237-276)||(14647175-14647214)
chr4 (307-342)||(29609948-29609983)
chr4 (74-141)||(32274204-32274271)
chr4 (71-129)||(38208986-38209044)
chr4 (297-346)||(54929220-54929267)
chr4 (24-57)||(16455323-16455356)
chr4 (300-340)||(5516793-5516833)
chr4 (16-44)||(18409603-18409631)
[»] scaffold0005 (4 HSPs)
scaffold0005 (16-380)||(51685-52043)
scaffold0005 (297-354)||(50161-50218)
scaffold0005 (16-100)||(183896-183973)
scaffold0005 (237-276)||(170076-170115)
[»] chr2 (53 HSPs)
chr2 (16-380)||(35215842-35216208)
chr2 (16-354)||(23452493-23452827)
chr2 (16-354)||(42452451-42452782)
chr2 (16-354)||(35218219-35218563)
chr2 (16-354)||(42923765-42924092)
chr2 (71-354)||(27583631-27583905)
chr2 (190-346)||(28568584-28568740)
chr2 (80-276)||(15693669-15693858)
chr2 (16-100)||(5377685-5377767)
chr2 (226-354)||(27136367-27136503)
chr2 (16-96)||(24162468-24162542)
chr2 (261-349)||(34575608-34575696)
chr2 (190-275)||(7502638-7502723)
chr2 (16-96)||(13910300-13910374)
chr2 (16-96)||(19504601-19504675)
chr2 (16-96)||(40032314-40032388)
chr2 (205-276)||(39286971-39287042)
chr2 (23-100)||(45280248-45280319)
chr2 (16-96)||(27104724-27104798)
chr2 (16-96)||(42064440-42064514)
chr2 (16-96)||(21520949-21521025)
chr2 (197-276)||(41304806-41304884)
chr2 (16-101)||(19502267-19502346)
chr2 (155-251)||(34575528-34575617)
chr2 (198-276)||(41303457-41303535)
chr2 (16-96)||(6264401-6264475)
chr2 (78-145)||(41304696-41304763)
chr2 (16-96)||(22163203-22163277)
chr2 (16-96)||(22287592-22287666)
chr2 (16-96)||(22407665-22407739)
chr2 (297-346)||(28568346-28568395)
chr2 (16-96)||(31733021-31733095)
chr2 (16-56)||(38020161-38020201)
chr2 (16-55)||(19007600-19007639)
chr2 (16-96)||(43623824-43623898)
chr2 (16-55)||(28196597-28196636)
chr2 (300-346)||(15693583-15693629)
chr2 (23-96)||(37963190-37963257)
chr2 (71-141)||(41303341-41303411)
chr2 (22-55)||(17849077-17849110)
chr2 (23-55)||(22874102-22874134)
chr2 (16-55)||(11739816-11739855)
chr2 (16-55)||(34979835-34979874)
chr2 (16-55)||(38020103-38020142)
chr2 (74-145)||(7502762-7502835)
chr2 (23-96)||(18800565-18800632)
chr2 (297-346)||(41303573-41303623)
chr2 (47-96)||(20589586-20589635)
chr2 (63-96)||(36559072-36559105)
chr2 (63-96)||(36561349-36561382)
chr2 (47-96)||(40699235-40699284)
chr2 (22-59)||(45239238-45239275)
chr2 (63-96)||(45332389-45332422)
[»] scaffold0154 (1 HSPs)
scaffold0154 (24-354)||(11737-12059)
[»] scaffold0031 (1 HSPs)
scaffold0031 (16-354)||(78885-79217)
[»] scaffold0133 (2 HSPs)
scaffold0133 (208-361)||(4541-4694)
scaffold0133 (65-146)||(4722-4803)
[»] scaffold0468 (2 HSPs)
scaffold0468 (241-354)||(2070-2183)
scaffold0468 (24-213)||(1895-2080)
[»] scaffold1674 (1 HSPs)
scaffold1674 (262-380)||(1-119)
[»] scaffold0025 (2 HSPs)
scaffold0025 (16-93)||(69547-69622)
scaffold0025 (16-96)||(73279-73357)
[»] scaffold0038 (1 HSPs)
scaffold0038 (16-100)||(41739-41817)
[»] scaffold0552 (1 HSPs)
scaffold0552 (16-100)||(1087-1165)
[»] scaffold0250 (1 HSPs)
scaffold0250 (16-96)||(2838-2912)
[»] scaffold0472 (1 HSPs)
scaffold0472 (16-96)||(6157-6231)
[»] scaffold0339 (1 HSPs)
scaffold0339 (16-96)||(3955-4029)
[»] scaffold0131 (2 HSPs)
scaffold0131 (16-96)||(14977-15051)
scaffold0131 (16-89)||(14638-14707)
[»] scaffold0068 (1 HSPs)
scaffold0068 (16-96)||(29119-29203)
[»] scaffold0267 (1 HSPs)
scaffold0267 (16-87)||(1-73)
[»] scaffold0008 (2 HSPs)
scaffold0008 (203-273)||(57836-57905)
scaffold0008 (73-146)||(57740-57813)
[»] scaffold0004 (1 HSPs)
scaffold0004 (16-55)||(79852-79891)
[»] scaffold0533 (1 HSPs)
scaffold0533 (205-252)||(1971-2018)
[»] scaffold0474 (1 HSPs)
scaffold0474 (297-346)||(10443-10492)
[»] scaffold0140 (2 HSPs)
scaffold0140 (63-96)||(22168-22201)
scaffold0140 (63-96)||(24443-24476)


Alignment Details
Target: chr6 (Bit Score: 282; Significance: 1e-158; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 16 - 354
Target Start/End: Original strand, 19704825 - 19705163
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaatataactcataaatt 115  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19704825 tgttgcctttctaaacccttgtttcagccccctccatctctctctcaaagtttgctctgatacaaggtctatatttatagtgaaatataactcataaatt 19704924  T
Q  116 tggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgc 215  Q
    |||||||||||||||||| ||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19704925 tggaacgaatatcacacttaagatacgtttcttttttttctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgc 19705024  T
Q  216 atcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaa 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||    
T  19705025 atcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgaaacaaatcttttatatttttagcaa 19705124  T
Q  316 caatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19705125 caatattcttcttccatcaaattttgagtcatactacaa 19705163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 16 - 354
Target Start/End: Original strand, 2629141 - 2629477
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||    |||||||||||||||||||||||| ||| ||||||| ||||||    
T  2629141 tgttgcctttctaaacccttgtttcagcccc-tctatctctctctcaaagtttaacatgatacaaggtctatatttatagtaaaagtataactaataaat 2629239  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| ||||  |||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2629240 ttggaacaaatactacactgaagatacgttt--ttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 2629337  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  2629338 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 2629437  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2629438 acaatattcttcttccatcaaattttgagtcatactacaa 2629477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 55 - 354
Target Start/End: Complemental strand, 18318051 - 18317753
Alignment:
Q  55 ctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnn 153  Q
    ||||| ||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||            
T  18318051 ctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtataactcataaatttggaacgaataccacactgaagatacgttt--tttttt 18317954  T
Q  154 nctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttat 253  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18317953 tctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcttccttcatacgatacaaaaatatatttat 18317854  T
Q  254 tgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactaca 353  Q
    ||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18317853 tgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccttcaaattttgagtcatactaca 18317754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 16 - 354
Target Start/End: Original strand, 12195771 - 12196102
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    |||||| |||||||||||||||||||||||||||||||||      |||||||||| |||||||||||||||||||||||| ||| ||||||||||||||    
T  12195771 tgttgcttttctaaacccttgtttcagccccctctatctc------aaagtttgctttgatacaaggtctatatttatagtaaaagtataactcataaat 12195864  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||| |||||||||||| |||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12195865 ttggaacaaataccacactgaagattcgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 12195962  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||       ||||||||||||||||||    
T  12195963 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagca 12196062  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||| | |||||||| ||||||||||||||||||    
T  12196063 acaatattctccatccatcaatttttgagtcatactacaa 12196102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 16 - 354
Target Start/End: Original strand, 30034859 - 30035194
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    |||||||||||||||||||||||| ||| ||||||||||||||   |||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  30034859 tgttgcctttctaaacccttgttttagctccctctatctctctt--aaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 30034956  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| ||||||||| |||||||||||||         |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  30034957 ttggaacaaatatcacattgaagatacgttt--ttattttctccttcagtgaaagaatatctgcatcaaaaatataatattccctttcaaaatatatttg 30035054  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||       ||||||||||||||||||    
T  30035055 cattaaatcgttcttcatacgatacaaaaatatatttattgtctataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagca 30035154  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  30035155 acaatattctccatccatcaaattttgagtcatactacaa 30035194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 18 - 354
Target Start/End: Original strand, 26932820 - 26933156
Alignment:
Q  18 ttgcctttctaaacccttgtttcagccccctctatctctctcgc--aaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    |||| ||||||| ||||||||||| ||||||||||||||||| |  |||||||||| ||| |||||||||||||||||||||||| |||||| |||||||    
T  26932820 ttgcttttctaagcccttgtttcaaccccctctatctctctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtataacccataaat 26932919  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||| |||||||||||| |||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26932920 ttggaacaaataccacactgaagattcgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 26933016  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||| ||||       ||||||||||||||||||    
T  26933017 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataataatattttcagcacaatatatatttgaaacaaatcttttatatttttagca 26933116  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||| | |||||||| ||||||||||||||||||    
T  26933117 acaatattctccatccatcaatttttgagtcatactacaa 26933156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 30967259 - 30966925
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  |||||||   || |||||||||||||||||||||| ||| ||||||||||||||    
T  30967259 tgttgtctttctaaacccttgtttcagccccctctatctctctc--aaagtttagcct-atacaaggtctatatttatagtaaaagtataactcataaat 30967163  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||| |||||||||||| |||||         |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  30967162 ttggaacaaataccacactgaagattcgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattcgctttcaaaatatatttg 30967065  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  30967064 cattaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaataaatcttttatatttttagca 30966965  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||| | |||||||||||| ||||||||||||||    
T  30966964 acaatattctccatccatcaaatttggagtcatactacaa 30966925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 155 - 354
Target Start/End: Original strand, 5275727 - 5275926
Alignment:
Q  155 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 254  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5275727 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttatt 5275826  T
Q  255 gtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  5275827 gtccataaatatattttcagcacaaaatatatttgaaataaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 5275926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 65 - 354
Target Start/End: Complemental strand, 17012059 - 17011781
Alignment:
Q  65 gtttgctctgatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagt 164  Q
    |||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||          |  ||||||    
T  17012059 gtttactccgatacaaggtctatatttatagagaaatataactcataaatttggaacgaacatcactctgaagatacgttttt--------tttttcagt 17011968  T
Q  165 gaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaat 264  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  17011967 gaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccatcatacggtacaaaaatatatttattgtccataaat 17011868  T
Q  265 atattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    ||||||||  |||||||||   ||         |||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||    
T  17011867 atattttctacacaaaata---tttaaaacaaacttttatatttttagcaataatattcttcatccatcaaattttaagtcatactacaa 17011781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 24 - 348
Target Start/End: Complemental strand, 17852592 - 17852275
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacg 122  Q
    ||||||||||||||||||||||||||||||||      || |||| ||||||| ||| ||||||||||||||| ||| ||||||||||||||||||||||    
T  17852592 ttctaaacccttgtttcagccccctctatctc------aaggtttactctgattcaaagtctatatttatagtaaaagtataactcataaatttggaacg 17852499  T
Q  123 aatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaat 222  Q
    |||| ||||| |||||||| |||         ||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17852498 aataccacac-gaagatacttttttttttcttctctttcagtgaaataatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 17852400  T
Q  223 cgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca--acaata 320  Q
     || ||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||  ||||       ||||||||||||||||||  ||||||    
T  17852399 agttcttcataaggtacaaaaatatatttattgtccataaatatattttcagcataaaata--tttgaaacaaatcttttatatttttagcaacacaata 17852302  T
Q  321 ttcttcttccatcaaattttgagtcata 348  Q
    |||| | | |||||||||||||||||||    
T  17852301 ttctccat-catcaaattttgagtcata 17852275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 47 - 354
Target Start/End: Original strand, 22858238 - 22858534
Alignment:
Q  47 ctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgtttc 146  Q
    ||||||||||||| ||||  ||  ||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||  ||||||||||||||    
T  22858238 ctctatctctctcacaaa--ttcatctgatacaaggtttatatttatagagaaatataactcataaatttggaacgtatatcacgttgaagatacgtttc 22858335  T
Q  147 nnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaata 246  Q
            |||||||| ||||||||||||||||| ||||        ||||||||||||||||||||||||| |||| || |||||||| ||||||||||    
T  22858336 ttttttt-ctccttcaatgaaagaatatttgcatcaaaa--------ttccctttcaaaatatatttgcatctaatcttctttcatacggtacaaaaata 22858426  T
Q  247 tatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 346  Q
    |||||||||||||||||||||||||||||||||| ||| |||        |||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  22858427 tatttattgtccataaatatattttcagcacaaagtatatttaaaacaaatcttttatatttttattaacaatattcttcatccatcaaattttgagtca 22858526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 90 - 354
Target Start/End: Complemental strand, 20526800 - 20526548
Alignment:
Q  90 ttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatat 189  Q
    |||||| |||||||||||  |||||||||||||||||||||| ||||||| ||||||        || |  ||| ||||||||| |||||| |||         
T  20526800 ttatagagaaatataacttgtaaatttggaacgaatatcacattgaagatgcgtttctttttttccttcc-cagggaaagaatacttgcatcaaa----- 20526707  T
Q  190 aatattccctttcaaaa-tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatcttt 288  Q
      ||||| ||||||||| ||||||||||||||||| ||||||||||| ||||||||||||| ||     ||||||||||||||||||| ||||||| |||    
T  20526706 --tattctctttcaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatgta-----cataaatatattttcagcataaaatatattt 20526614  T
Q  289 gnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |       ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  20526613 gaaacaaatcttttatatttttagcaacaatattcttcacccatcaaattttgagtcatactacaa 20526548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 190 - 276
Target Start/End: Complemental strand, 30445404 - 30445318
Alignment:
Q  190 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 276  Q
    |||||||| ||| ||||||||||||||||||||| ||||||||| | |||||||||||||||||||| |||||||||||||||||||    
T  30445404 aatattcctttttaaaatatatttgcatcaaatcttccttcatatggtacaaaaatatatttattgttcataaatatattttcagca 30445318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 28241577 - 28241655
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||||    
T  28241577 tgttgcctttctaaacccttgtttcagccccctctatctct------aagtttgctctgatacaaggtctatatttatagtgaaa 28241655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 14459021 - 14459093
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttata 94  Q
    |||||||||||||||||||| ||||||||||||||||||      ||||||||||||||||||||||||||||||||||    
T  14459021 tgttgcctttctaaacccttatttcagccccctctatct------caaagtttgctctgatacaaggtctatatttata 14459093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 20915612 - 20915688
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||   || || || |||||||||||||||||||||||||    
T  20915612 tgttgcctttctaaacccttgtttcagccccctctatctctctc---aatttagc-ctgatacaaggtctatatttatagt 20915688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 1230505 - 1230583
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    |||||||||||||||||||||||||| ||| |||||||||      |||||||||| ||||||||||||||||||||||||||||    
T  1230505 tgttgcctttctaaacccttgtttcaaccctctctatctc------aaagtttgctatgatacaaggtctatatttatagtgaaa 1230583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 14507431 - 14507505
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||| ||||||||||||||      ||||||||||||| ||||||||||||||||||||||    
T  14507431 tgttgcctttctaaacccttgttttagccccctctatct------caaagtttgctctaatacaaggtctatatttatagt 14507505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 26065044 - 26064961
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||    | || ||||||||||||||||||||||||||||    
T  26065044 tgttgccattctaaacccttgtttcagccccctctatctctctc-caagaaatactgtgatacaaggtctatatttatagtgaaa 26064961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 26085013 - 26084930
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||    | || ||||||||||||||||||||||||||||    
T  26085013 tgttgccattctaaacccttgtttcagccccctctatctctctc-caagaaatactgtgatacaaggtctatatttatagtgaaa 26084930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 15532937 - 15533036
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    |||| ||||||||||||||||||||||||||||||||||      ||||||||  |||||||||||||||||||||||||| ||| ||||||| | ||||    
T  15532937 tgttacctttctaaacccttgtttcagccccctctatct------caaagtttagtctgatacaaggtctatatttatagtaaaagtataactta-aaat 15533029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 15541398 - 15541470
Alignment:
Q  18 ttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||      ||||||||  ||||||||||||||||||||||||||    
T  15541398 ttgcctttctaaacccttgtttcagccccctctatct------caaagtttagtctgatacaaggtctatatttatagt 15541470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 8995537 - 8995463
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||| |||||||||||||||||      ||||| |||||||||||| ||||||||||||||    
T  8995537 tgttgcctttctaaacccttgttttagccccctctatctctc------agtttactctgatacaagatctatatttatagt 8995463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 9019984 - 9019910
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||| |||||||||||||||||      ||||| |||||||||||| ||||||||||||||    
T  9019984 tgttgcctttctaaacccttgttttagccccctctatctctc------agtttactctgatacaagatctatatttatagt 9019910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 11983285 - 11983359
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||| || ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  11983285 tgttgcctttctaagcctttgtttcagccccctctatctcc------aagtttgctctgatacaaggtctatatttatagt 11983359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 19227664 - 19227738
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||| |||||||| |||||      ||||||||||||||||||||| ||||||||||||||    
T  19227664 tgttgcctttctaaacccttgtttgagccccctttatct------caaagtttgctctgatacaagatctatatttatagt 19227738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 4816487 - 4816575
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc--------aaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||||||| |        |||||||   |||||||||||||||||||||||||    
T  4816487 tgttgcctttctaaacccttgtttcagccccctctatctctctctctctctctcaaagtttagcctgatacaaggtctatatttatagt 4816575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 190 - 276
Target Start/End: Complemental strand, 30443195 - 30443111
Alignment:
Q  190 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 276  Q
    |||||| | ||| |||||| |||||||||||||| ||||| ||||| |||||| |||||||  ||||||||||||||||||||||||    
T  30443195 aatatttcttttaaaaatacatttgcatcaaatcttcctttatacggtacaaacatatatt--ttgtccataaatatattttcagca 30443111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 1072133 - 1072207
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||| || |||||||      |||||||| ||||||||||| |||||||||||||||    
T  1072133 tgttgcctttctaaacccttgtttcagctccttctatct------caaagtttactctgatacaatgtctatatttatagt 1072207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 24338704 - 24338778
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      ||| |||| | ||||||||| |||||||||||||||    
T  24338704 tgttgcctttctaaacccttgtttcagccccctctatct------caaggtttacactgatacaatgtctatatttatagt 24338778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 32447572 - 32447646
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      ||| |||| ||||||||||| | |||||||||||||    
T  32447572 tgttgcctttctaaacccttgtttcagccccctctatct------caaggtttactctgatacaaagcctatatttatagt 32447646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 13057250 - 13057178
Alignment:
Q  18 ttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||      ||| |||| | ||||||||| |||||||||||||||    
T  13057250 ttgcctttctaaacccttgtttcagccccctctatct------caaggtttacactgatacaatgtctatatttatagt 13057178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 25477332 - 25477293
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25477332 tgttgcctttctaaacccttgtttcagccccctctatctc 25477293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 15530378 - 15530452
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||| |||||| |||||| |||||||||||||||||| |      ||||| |||||||||||||||||||||||||||    
T  15530378 tgttgccattctaagcccttgcttcagccccctctatctccc------agtttactctgatacaaggtctatatttatagt 15530452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 3390437 - 3390398
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  3390437 tgttgcctttctaaacccttgtttcagccccgtctatctc 3390398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 3632194 - 3632268
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||| | ||||||||||      ||| |||| | ||||||||| |||||||||||||||    
T  3632194 tgttgcctttctaaacccttgtttcaactccctctatct------caaggtttacactgatacaatgtctatatttatagt 3632268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 26066309 - 26066358
Alignment:
Q  47 ctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||  || ||||||||||| ||||||||||||||||||||||||    
T  26066309 ctctatctcaatctcaaagtttgctttgatacaaggtctatatttatagt 26066358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 26068580 - 26068629
Alignment:
Q  47 ctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||  || ||||||||||| ||||||||||||||||||||||||    
T  26068580 ctctatctcaatctcaaagtttgctttgatacaaggtctatatttatagt 26068629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 29754977 - 29755026
Alignment:
Q  47 ctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||| |||||||| || |||||||| ||||||||||||||||||||||||    
T  29754977 ctctctctctctctcagagtttgctttgatacaaggtctatatttatagt 29755026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 15719705 - 15719673
Alignment:
Q  23 tttctaaacccttgtttcagccccctctatctc 55  Q
    |||||||||||||||||||||||||||||||||    
T  15719705 tttctaaacccttgtttcagccccctctatctc 15719673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 3630120 - 3630159
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  3630120 tgttgcctttctaaaccgatgtttcagccccctctatctc 3630159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 299 - 342
Target Start/End: Complemental strand, 12158575 - 12158532
Alignment:
Q  299 ttttatatttttagcaacaatattcttcttccatcaaattttga 342  Q
    ||||||||||||||||||||| |||||| | |||||||||||||    
T  12158575 ttttatatttttagcaacaatcttcttcattcatcaaattttga 12158532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 3233987 - 3234025
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatct 54  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  3233987 tgttgtctttctaaatccttgtttcagccccctctatct 3234025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 13039810 - 13039773
Alignment:
Q  18 ttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  13039810 ttgcctttctaaacccttgtttcagcctcctatatctc 13039773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 22490698 - 22490658
Alignment:
Q  16 tgttgcctttctaaa-cccttgtttcagccccctctatctc 55  Q
    ||||||||||| ||| |||||||||||||||||||||||||    
T  22490698 tgttgcctttcaaaaacccttgtttcagccccctctatctc 22490658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 346
Target Start/End: Complemental strand, 30443069 - 30443022
Alignment:
Q  301 ttatatttttagcaacaatattcttcttccatc--aaattttgagtca 346  Q
    ||||||||||| |||||||||||||| ||||||  |||||||||||||    
T  30443069 ttatatttttaacaacaatattcttcatccatcataaattttgagtca 30443022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 241; Significance: 1e-133; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 16 - 380
Target Start/End: Complemental strand, 27912559 - 27912195
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  27912559 tgttgcctttctaaacccttgtttcagcaccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 27912460  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||||||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27912459 ttggaacaaatatcacactgaagatacgttt-ttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 27912361  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  27912360 catcaaatcgtttttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 27912261  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 380  Q
    |||||||||| | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  27912260 acaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattag 27912195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 16 - 380
Target Start/End: Complemental strand, 18469034 - 18468674
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||    |||||||||||||||||||||||| ||| ||||||||||||||    
T  18469034 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttatcatgatacaaggtctatatttatagtaaaagtataactcataaat 18468937  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||| |||||||||||||| |||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18468936 ttggaacaaataccacactgaagatactttt---tattttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 18468840  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  18468839 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 18468740  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 380  Q
    | |||||||| | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  18468739 aaaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattag 18468674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 25804048 - 25803709
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc----aaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcat 110  Q
    ||||||| |||||||||||||||| ||||||||||||||||||| |    ||| || || ||||||||||||||||||||||||| ||| ||||||||||    
T  25804048 tgttgccattctaaacccttgtttgagccccctctatctctctctctctcaaatttagc-ctgatacaaggtctatatttatagtaaaagtataactcat 25803950  T
Q  111 aaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatata 210  Q
    ||||||||||| ||||| |||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25803949 aaatttggaacaaatattacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatata 25803853  T
Q  211 tttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattttt 310  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||    
T  25803852 tttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttt 25803753  T
Q  311 agcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||||||| | |||||||||||||||||||||||||||    
T  25803752 agcaacaatattctccatccatcaaattttgagtcatactacaa 25803709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 16 - 360
Target Start/End: Complemental strand, 27910473 - 27910131
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    |||||||||| |||||| |||||||||||||| ||||||||||| ||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  27910473 tgttgcctttttaaacc-ttgtttcagcccccgctatctctctctcaaagtttaacctgatacaaggtctatatttatagtaaaagtataactcataaat 27910375  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||| |||||||||||||| |||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27910374 ttggaacaaataccacactgaagatactttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 27910277  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  27910276 catcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 27910177  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaaaattct 360  Q
    | |||||||| | ||||||||||||||||||||||||||| |||||    
T  27910176 ataatattctccatccatcaaattttgagtcatactacaacattct 27910131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 24 - 356
Target Start/End: Original strand, 18511476 - 18511802
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaa-atataactcataaatttggaacg 122  Q
    ||||||||||||||||||||||||||||||||||    |||||||  |||||||||||||||||||||||| | || |||||||||||||||||||||||    
T  18511476 ttctaaacccttgtttcagccccctctatctctc----aaagtttagtctgatacaaggtctatatttatattaaacatataactcataaatttggaacg 18511571  T
Q  123 aatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaat 222  Q
    |||| |||||| |||||||||||         |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  18511572 aataccacactaaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatatttcctttcaaaatatatttgcatcaaat 18511668  T
Q  223 cgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatatt 322  Q
    ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |       ||||||||||||||||||||||||||    
T  18511669 cgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatattcgaaacaaatcttttatatttttagcaacaatatt 18511768  T
Q  323 cttcttccatcaaattttgagtcatactacaaaa 356  Q
    |||| |||||||||||||||||||||||||||||    
T  18511769 cttcatccatcaaattttgagtcatactacaaaa 18511802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 24 - 380
Target Start/End: Original strand, 18509582 - 18509931
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaa-atataactcataaatttggaacg 122  Q
    ||||||||||||||||||||||| ||||||||||    |||||||  |||||||||||||||||||||||||| || ||||||||||||||||||| | |    
T  18509582 ttctaaacccttgtttcagcccc-tctatctctc----aaagtttagtctgatacaaggtctatatttatagtaaacatataactcataaatttgggatg 18509676  T
Q  123 aatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaat 222  Q
    |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18509677 aataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 18509773  T
Q  223 cgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatatt 322  Q
    | | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |       ||||||||||||||||||||||||||    
T  18509774 cattcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatattcgaaataaatcttttatatttttagcaacaatatt 18509873  T
Q  323 cttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 380  Q
    || | ||||||||||||||||||||||||||  |||||| |||||||||  |||||||    
T  18509874 ctccatccatcaaattttgagtcatactacaccattctccaccttgactttaaattag 18509931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 16 - 336
Target Start/End: Complemental strand, 10586865 - 10586549
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||  |||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  10586865 tgttgccattctaaacccttgtttcagcccc-tctatctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 10586769  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10586768 ttggaacaaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 10586671  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  10586670 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 10586571  T
Q  315 acaatattcttcttccatcaaa 336  Q
    |||||||||  | |||||||||    
T  10586570 acaatattccccatccatcaaa 10586549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 15552268 - 15551927
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc----aaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcat 110  Q
    |||||| |||||||||||||||||||| |||||||||||||||| |    |||||||   ||||||||||||||||||||||||| ||| ||||||||||    
T  15552268 tgttgcttttctaaacccttgtttcagtcccctctatctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcat 15552169  T
Q  111 aaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatata 210  Q
    ||||||||||| |||| ||| ||||||||||||||         |||||||||||||||||||||||||| |||||| | ||||||||||||||||||||    
T  15552168 aaatttggaacaaataccacgctgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatgtcatattccctttcaaaatata 15552071  T
Q  211 tttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattttt 310  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||       ||||||||||||||    
T  15552070 tttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatcttcagcacaatatatatttgaaacaaatcttttatattttt 15551971  T
Q  311 agcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||||||| | |||||||||||||||||||||||||||    
T  15551970 agcaacaatattctccatccatcaaattttgagtcatactacaa 15551927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 47 - 354
Target Start/End: Original strand, 3373322 - 3373628
Alignment:
Q  47 ctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacgaatatcacactgaagatacgttt 145  Q
    |||||||||  || ||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||| |||| ||||||||||||||||||    
T  3373322 ctctatctcaatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgttt 3373421  T
Q  146 cnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaat 245  Q
             |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3373422 --tttttttctccttcagtgaaaaaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaat 3373519  T
Q  246 atatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtc 345  Q
    |||||||||||||||||||||||||||||||||| |||| ||||       |||||||||||||||||||||||||||| | ||||||||||| ||||||    
T  3373520 atatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattctgagtc 3373619  T
Q  346 atactacaa 354  Q
    |||||||||    
T  3373620 atactacaa 3373628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 16 - 380
Target Start/End: Original strand, 26098507 - 26098865
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||| |||||||||||| |||||||||||||||||||       | |||| ||||||| ||||||||||||||||||| ||| |||||||||||||     
T  26098507 tgttgccattctaaacccttatttcagccccctctatctcc------aggtttactctgattcaaggtctatatttatagtaaaagtataactcataaaa 26098600  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    |||||||||||| |||| |||||||||||||         |||||||| ||||||||| |||| || |||||||||||||||||||||||||||||||||    
T  26098601 ttggaacgaataccacattgaagatacgttt-ttttatttctccttcaatgaaagaatttttgtatcaaaaatataatattccctttcaaaatatatttg 26098699  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  26098700 catcaaatcgttctttatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 26098799  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 380  Q
    | |||||||| | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  26098800 ataatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattag 26098865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 26097756 - 26097423
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||| ||||||||| || |||||||||||||||||||      ||||||| ||||||| ||||||||||||||||||| ||| ||||||||||||||    
T  26097756 tgttgccattctaaacctttatttcagccccctctatctc------aaagtttactctgattcaaggtctatatttatagtaaaagtataactcataaat 26097663  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctt--tcaaaatatatt 212  Q
    |||||||||||| |||||||||||||| |||         |||||||||||||||||||||||||| |||||||||| ||| ||||  ||||||||||||    
T  26097662 ttggaacgaataccacactgaagatacattt--ttttttcctccttcagtgaaagaatatttgcatcaaaaatataacatttccttcttcaaaatatatt 26097565  T
Q  213 tgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttag 312  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||       | ||||||||||||||    
T  26097564 tgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagtacaaaatatatttgaaacaaattttttatatttttag 26097465  T
Q  313 caacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||||| | |||||||||||||||||||||||||||    
T  26097464 caacaatattctccatccatcaaattttgagtcatactacaa 26097423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 16 - 276
Target Start/End: Complemental strand, 18466707 - 18466453
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  18466707 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaaatataactcataaat 18466610  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||| |||||||||||||| |||         |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18466609 ttggaacaaataccacactgaagatactttt-----ttttctcctttagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 18466515  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 276  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18466514 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatttttagca 18466453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 30 - 354
Target Start/End: Complemental strand, 18596656 - 18596328
Alignment:
Q  30 acccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacgaatatc 128  Q
    |||||||||||||||||||||||| |      || |||| ||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| |    
T  18596656 acccttgtttcagccccctctatccc------aaggtttactctgattcaaggtctatatttatagtaaaagtataactcataaatttggaacgaatacc 18596563  T
Q  129 acactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtcct 228  Q
    |||||||||||||||||         |||||||||||| |||||||||| || ||||||||||||||| |||||||||||||||||||||||||||| ||    
T  18596562 acactgaagatacgttt--tttttttctccttcagtgatagaatatttgtatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttct 18596465  T
Q  229 tcatacgatacaaaaatatat-----------ttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaaca 317  Q
    | ||||| |||||||||||||           |||||||||||||||||||||||| |||||||||| ||||       |||||||||||||||||||||    
T  18596464 ttatacggtacaaaaatatatttatggtatatttattgtccataaatatattttcaacacaaaatatatttgaaacaaatcttttatatttttagcaaca 18596365  T
Q  318 atattcttcttccatcaaattttgagtcatactacaa 354  Q
    ||||||| | ||||||||||||||||||||| |||||    
T  18596364 atattctccatccatcaaattttgagtcatagtacaa 18596328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 173 - 354
Target Start/End: Complemental strand, 21288713 - 21288531
Alignment:
Q  173 atttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgata-caaaaatatatttattgtccataaatatatttt 271  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || | |||||||||||||||||||||||||||||||    
T  21288713 atttgcatcaaaaatataatattccctttcaaaatatatttgcataaaatcgttcttcatacggtaccgaaaatatatttattgtccataaatatatttt 21288614  T
Q  272 cagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    ||||||||||||| |||        |||||| ||||||||||||||||||||| | ||||||||||||||||| |||||||||    
T  21288613 cagcacaaaatatattttaaacaaatcttttttatttttagcaacaatattctccatccatcaaattttgagttatactacaa 21288531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 71 - 276
Target Start/End: Complemental strand, 15143461 - 15143262
Alignment:
Q  71 tctgatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnc-tccttcagtgaaag 169  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||| |||||||||||||||        | | ||||||||||||    
T  15143461 tctgatacaaggtctatatttatagagaaatataactcataaatttgtaacggatatcacgctgaagatacgtttcttttttccccttcttcagtgaaag 15143362  T
Q  170 aatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatatt 269  Q
    ||||||||||| |||       |||||||||||||||||||||||||||||||| ||||||||| | ||||||||| |||||||||||||||||||||||    
T  15143361 aatatttgcatcaaa-------tattccctttcaaaatatatttgcatcaaatcttccttcatatggtacaaaaatgtatttattgtccataaatatatt 15143269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 204 - 349
Target Start/End: Original strand, 17415748 - 17415893
Alignment:
Q  204 aaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntctttta 303  Q
    |||||||||||||||||||  ||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||    
T  17415748 aaatatatttgcatcaaattttccttcatacagtacaaaaatatatttattgtccataaatatattttcagcaaaaaatatatttgaaacaaatctttta 17415847  T
Q  304 tatttttagcaacaatattcttcttccatcaaattttgagtcatac 349  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  17415848 tatttttagcaacaatattcttcatccatcaaattttgagtcatac 17415893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 4410084 - 4410002
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  4410084 tgttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttgctctgatacaaggtctatatttatagtgaaa 4410002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 16 - 223
Target Start/End: Complemental strand, 40221545 - 40221340
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaatataactcataaatt 115  Q
    ||||||| ||||||||||||||||||||||||||||||||      || |||| ||||||  ||| ||||||||||||||| |||  |||||||||||||    
T  40221545 tgttgccattctaaacccttgtttcagccccctctatctc------aaggtttactctgagtcaatgtctatatttatagtaaaag-taactcataaatt 40221453  T
Q  116 tggaacgaatatcacactgaagatacgtttcnnnnnnnn-----ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatata 210  Q
    | ||||| ||||||||||||||||||||||              ||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  40221452 tagaacggatatcacactgaagatacgttttttgttttttccttctcctgcagtgaaagaatatttgcatcaaaaatataatattccttttcaaaatata 40221353  T
Q  211 tttgcatcaaatc 223  Q
    |||| | ||||||    
T  40221352 tttgaaacaaatc 40221340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 6661446 - 6661560
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaatataactcataaatttggaacga 123  Q
    |||||||||||||||||| ||| |||||||||      || |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||     
T  6661446 ttctaaacccttgtttcaaccctctctatctc------aaggtttactctgatacaaggtctatatttatagtgaaatataactcataaatttgaaacgg 6661539  T
Q  124 atatcacactgaagatacgtt 144  Q
    |||| ||||||||||| ||||    
T  6661540 atataacactgaagatgcgtt 6661560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 252 - 354
Target Start/End: Original strand, 6661929 - 6662031
Alignment:
Q  252 attgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatacta 351  Q
    |||||||||||||||||||||| |||||||||| ||||       | |||||||||||||||||||||||||||| |||||||| |||| ||||||||||    
T  6661929 attgtccataaatatattttcaacacaaaatatatttgaaacaaatattttatatttttagcaacaatattcttcatccatcaagttttaagtcatacta 6662028  T
Q  352 caa 354  Q
    |||    
T  6662029 caa 6662031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 6747329 - 6747249
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    |||||| |||||||||||||||||||||||||||||||||| || |    |||||||||||||||||||||||||||||||||||    
T  6747329 tgttgcttttctaaacccttgtttcagccccctctatctctttctc----tttgctctgatacaaggtctatatttatagtgaaa 6747249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 10529355 - 10529433
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    |||||||||||||||||||||||||| ||| |||||||||      |||||||||||||||||||||||||||||||||||||||    
T  10529355 tgttgcctttctaaacccttgtttcaacccactctatctc------aaagtttgctctgatacaaggtctatatttatagtgaaa 10529433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 25921729 - 25921803
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||| |||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||    
T  25921729 tgttgtctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatatttatagt 25921803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 31542758 - 31542684
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||| ||||||||||||||||||||||||    
T  31542758 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctttgatacaaggtctatatttatagt 31542684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 39854506 - 39854429
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    ||||||||||||||||||||||||||||||| ||||||||      |||||||||||||||||||||||||||||||||||||||    
T  39854506 tgttgcctttctaaacccttgtttcagcccc-tctatctc------aaagtttgctctgatacaaggtctatatttatagtgaaa 39854429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 24 - 145
Target Start/End: Original strand, 41585970 - 41586086
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacg 122  Q
    ||||||||||||||||||||||||| ||||||      || |||| |||||||||||   ||||||||||||| ||| ||||||||||| ||||||||||    
T  41585970 ttctaaacccttgtttcagccccctttatctc------aaggtttactctgatacaaaacctatatttatagtaaaagtataactcatagatttggaacg 41586063  T
Q  123 aatatcacactgaagatacgttt 145  Q
    |||| || |||||||||||||||    
T  41586064 aataccagactgaagatacgttt 41586086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 1189865 - 1189944
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgc-tctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||| ||||||||||||||||||||||||||  ||| |||| | ||||||||||||||||||||||||||    
T  1189865 tgttgcctttctaaactcttgtttcagccccctctatctctct--caaggtttacatctgatacaaggtctatatttatagt 1189944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 2818592 - 2818666
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||| ||||||||||||||||||||||||||||||||||      |||||||| |||||||||||||||||||||||||||    
T  2818592 tgttacctttctaaacccttgtttcagccccctctatct------caaagtttactctgatacaaggtctatatttatagt 2818666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 20507718 - 20507792
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      |||||||| |||||||||||| ||||||||||||||    
T  20507718 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttactctgatacaagatctatatttatagt 20507792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 31545103 - 31545029
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||||||||||||||||||||||||||| |||||      ||||||||||| ||||||||||||||||||||||||    
T  31545103 tgttgcctttctaaacccttgtttcagccccctttatct------caaagtttgctttgatacaaggtctatatttatagt 31545029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 38882129 - 38882054
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||||||||||||||||||||||||||     |||| || | ||||||||||||||||||||||||||||||||||    
T  38882129 tgttgcctttctaaacccttgtttcagccccc-----ctctatctccaagtttgctctgatacaaggtctatatttatagt 38882054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 21684707 - 21684791
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc----aaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |    |||||||   |||||||||||||||||||||||||    
T  21684707 tgttgcctttttaaacccttgtttcagccccctctatctctctctctctcaaagtttagcctgatacaaggtctatatttatagt 21684791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 2174942 - 2174868
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      | |||||||||||||||||||| || ||||||||||    
T  2174942 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggcctgtatttatagt 2174868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 4236652 - 4236578
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||| |||||||||||||||| ||||||       ||||||||||||||||||||||||||||||||||    
T  4236652 tgttgcctttctaaactcttgtttcagccccctttatctcc------aagtttgctctgatacaaggtctatatttatagt 4236578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 31179627 - 31179701
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||| ||||||||||      ||||||||||| |||||||| |||||||||||||||    
T  31179627 tgttgcctttctaaacccttgtttcagctccctctatct------caaagtttgctttgatacaatgtctatatttatagt 31179701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 297 - 354
Target Start/End: Complemental strand, 40221341 - 40221284
Alignment:
Q  297 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||||||||||||||||||||||| || || |||||||||||||||||||||    
T  40221341 tcttttatatttttagcaacaatattcttcatcaattaaattttgagtcatactacaa 40221284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 16776181 - 16776112
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattt 91  Q
    |||||||||| ||||||||||||||||||||||||||||      |||||||||||| ||||||||||||||||||    
T  16776181 tgttgcctttgtaaacccttgtttcagccccctctatct------caaagtttgctcagatacaaggtctatattt 16776112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 302 - 354
Target Start/End: Complemental strand, 18466465 - 18466413
Alignment:
Q  302 tatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  18466465 tatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 18466413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 6745092 - 6745006
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagt--ttgctctgatacaaggtctatatttatagtgaaa 100  Q
    |||||| ||||||||| |||||||||||||||| |||||||||| |    |  ||||||||||||||||||||||||||||||||||    
T  6745092 tgttgcttttctaaacacttgtttcagccccctttatctctctctctctctctttgctctgatacaaggtctatatttatagtgaaa 6745006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 34477310 - 34477353
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctc 59  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  34477310 tgttgcctttctaaacccttgtttcagccccctctatctctctc 34477353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 34479675 - 34479718
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctc 59  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  34479675 tgttgcctttctaaacccttgtttcagccccctctatctctctc 34479718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 12556187 - 12556253
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||| |||||||||||||||||||      ||||||| |||||||||||||||||||||||||||    
T  12556187 ttctaaacccttatttcagccccctctatctc------aaagtttactctgatacaaggtctatatttatagt 12556253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 302 - 351
Target Start/End: Complemental strand, 15143274 - 15143225
Alignment:
Q  302 tatatttttagcaacaatattcttcttccatcaaattttgagtcatacta 351  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  15143274 tatatttttagcaacaatattctccatccatcaaattttgagtcatacta 15143225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 16092456 - 16092534
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgc-tctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||| ||||||||||||||| |   |||||| | |||||||||| |||||||||| ||||    
T  16092456 tgttgcctttctaaacccttgtttcaaccccctctatctctcac---aagtttacatctgatacaaagtctatatttctagt 16092534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 17072906 - 17072832
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||| |||||||||||||||||||||||||||||||||      ||| |||| | ||||||||| |||||||||||||||    
T  17072906 tgttgtctttctaaacccttgtttcagccccctctatct------caaggtttacactgatacaatgtctatatttatagt 17072832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 20043073 - 20042999
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||| ||||||||||||||||||||||      ||| ||||||| |||||||| | |||||||||||||    
T  20043073 tgttgcctttctaaacacttgtttcagccccctctatct------caaggtttgctatgatacaaagcctatatttatagt 20042999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 25904126 - 25904052
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||| |||||||||||||||||||||||||||||||||      ||| |||| | ||||||||| |||||||||||||||    
T  25904126 tgttgtctttctaaacccttgtttcagccccctctatct------caaggtttacactgatacaatgtctatatttatagt 25904052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 36402592 - 36402658
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||      ||| |||| |||||||| ||||||||||||||||||    
T  36402592 ttctaaacccttgtttcagccccctctatct------caacgtttactctgatataaggtctatatttatagt 36402658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 31472869 - 31472908
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  31472869 tgttgcctttctaaacccttgttttagccccctctatctc 31472908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 15354770 - 15354812
Alignment:
Q  54 tctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||| ||||||||||| ||||||||||||||||||||||||    
T  15354770 tctctcccaaagtttgctttgatacaaggtctatatttatagt 15354812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 15357046 - 15357088
Alignment:
Q  54 tctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||| ||||||||||| ||||||||||||||||||||||||    
T  15357046 tctctcccaaagtttgctttgatacaaggtctatatttatagt 15357088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 10474579 - 10474653
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||||||||| ||||||||||||||||||||| |      ||| |||| | ||||||||| |||||||||||||||    
T  10474579 tgttgcctttctaaatccttgtttcagccccctctattt------caaggtttacactgatacaatgtctatatttatagt 10474653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 96
Target Start/End: Complemental strand, 23665127 - 23665087
Alignment:
Q  56 tctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  23665127 tctctcaaagtttgctttgatacaaggtctatatttatagt 23665087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 96
Target Start/End: Complemental strand, 23667402 - 23667362
Alignment:
Q  56 tctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  23667402 tctctcaaagtttgctttgatacaaggtctatatttatagt 23667362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 23793460 - 23793500
Alignment:
Q  56 tctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  23793460 tctctcaaagtttgctttgatacaaggtctatatttatagt 23793500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 695912 - 695873
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  695912 tgttgcctttctaaacccttgtttcatccccctttatctc 695873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 6756517 - 6756478
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||| |||||||||| |||||||||||    
T  6756517 tgttgcctttctaaaccattgtttcagctccctctatctc 6756478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 34530922 - 34530961
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  34530922 tgttgcatttctaaacacttgtttcagccccctctatctc 34530961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 37706037 - 37706109
Alignment:
Q  17 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatag 95  Q
    |||||||||||||||| || ||||||||||||||||||      ||| |||| | ||||||||| ||||||||||||||    
T  37706037 gttgcctttctaaacctttatttcagccccctctatct------caaggtttacactgatacaatgtctatatttatag 37706109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 39398249 - 39398287
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  39398249 tgttgcctttctaaacccttgtttcag-cccctctatctc 39398287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 6661594 - 6661636
Alignment:
Q  190 aatattccctttcaaaatatatttgcatcaaatcgtccttcat 232  Q
    |||||||||||||||||||||||| | ||||||| ||||||||    
T  6661594 aatattccctttcaaaatatatttacttcaaatcttccttcat 6661636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 4897742 - 4897674
Alignment:
Q  23 tttctaaacccttgtttcag--ccccctctatctctctcgcaaagtttgctctgatacaaggtctatat 89  Q
    ||||||||||||||||||||  | | |||| |||||||| ||| |||| ||||||| ||||||||||||    
T  4897742 tttctaaacccttgtttcagctctctctctctctctctctcaaggtttactctgatgcaaggtctatat 4897674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 5778979 - 5779036
Alignment:
Q  88 atttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgttt 145  Q
    |||||||| ||||||||| ||||||||||  |||| |||||||  |||||||||||||    
T  5778979 atttatagagaaatataattcataaatttaaaacggatatcacgttgaagatacgttt 5779036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 346
Target Start/End: Original strand, 5779168 - 5779217
Alignment:
Q  297 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 346  Q
    ||||||||||||||||||| ||| |||||| || |||||||||| |||||    
T  5779168 tcttttatatttttagcaataatcttcttcatctatcaaattttaagtca 5779217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 96
Target Start/End: Original strand, 38960339 - 38960372
Alignment:
Q  63 aagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||| ||||||||||||||||||||||||    
T  38960339 aagtttgctttgatacaaggtctatatttatagt 38960372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 96
Target Start/End: Complemental strand, 10757245 - 10757213
Alignment:
Q  64 agtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||| ||||||||||||||||||||||||    
T  10757245 agtttgctttgatacaaggtctatatttatagt 10757213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 23742055 - 23742095
Alignment:
Q  56 tctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||| ||||||||||| ||| ||||||||||||||||||||    
T  23742055 tctctcaaagtttgctttgacacaaggtctatatttatagt 23742095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 276
Target Start/End: Complemental strand, 32520316 - 32520241
Alignment:
Q  203 aaaatatatttgcatcaaatcgtccttcatacgatacaaaaatata--tttattgtccataaatatattttcagca 276  Q
    ||||||| ||||||||||||  | |||| |||| ||||||||||||  |||| | | |||||||||||||||||||    
T  32520316 aaaatatgtttgcatcaaatttttcttcgtacggtacaaaaatatatttttactctacataaatatattttcagca 32520241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 2074 - 1737
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||| ||| |||||||||||||||||||||||| ||||||| ||||||    
T  2074 tgttgcctttctaaacccttgtttcagccccctatatctttctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtataacttataaat 1975  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    |||||||||||| ||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1974 ttggaacgaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 1877  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  1876 catcaaatcttccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 1777  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  1776 acaatattcttcttccttcaaattttgagtcatactacaa 1737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 78)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 16 - 354
Target Start/End: Original strand, 7094678 - 7095013
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaa-atataactcataaat 114  Q
    ||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| | || |||||||||||||||    
T  7094678 tgttgccattctaaacccttgtttcagccccctctatctctctc--aaagtttgctctgatacaaggtctatatttataataaacatataactcataaat 7094775  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    |||||||||||| ||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7094776 ttggaacgaataccacactgaagatacgttt--ttttttcctccttcagtgaaagaatatttgcataaaaaatataatatttcctttcaaaatatatttg 7094873  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  7094874 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 7094973  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  7094974 acaatattctccatccatcaaattttgagtcatactacaa 7095013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 24 - 380
Target Start/End: Original strand, 7092439 - 7092792
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaa-atataactcataaatttggaacg 122  Q
    |||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  7092439 ttctaaacccttgtttcagccccctccatctctctc--aaagtttgctctgatacaaggtctatatttatagtaaacatataactcataaatttggaacg 7092536  T
Q  123 aatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaat 222  Q
    |||| ||||||||||||||  ||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7092537 aataccacactgaagatacaatt--ttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 7092634  T
Q  223 cgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatatt 322  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||       ||||||||||||||||||||||||||    
T  7092635 cgttcttcatacgatacaaaaatatatttattgtccataaatatatcttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatatt 7092734  T
Q  323 cttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 380  Q
    || | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  7092735 ctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattag 7092792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 16 - 378
Target Start/End: Original strand, 7470278 - 7470643
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaa-atataactcataaat 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||  |||||||||||||||||||||||||| || |||||||||||||||    
T  7470278 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagtctgatacaaggtctatatttatagtaaacatataactcataaat 7470375  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnn----ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatata 210  Q
    |||||||||||| ||||||||||||||||||             |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  7470376 ttggaacgaataccacactgaagatacgtttttttttttcttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatata 7470475  T
Q  211 tttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattttt 310  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       | ||||||||||||    
T  7470476 tttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatgttttatattttt 7470575  T
Q  311 agcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaatt 378  Q
    ||||| |||||||| | ||||||||||||||||||||||||||| |||||| |||||||||| |||||    
T  7470576 agcaataatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaatt 7470643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 16 - 380
Target Start/End: Original strand, 7349529 - 7349891
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  7349529 tgttgcctttctaaacccctgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 7349628  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||||||||||||||||||||||         ||| |||||||||||||||||||| | ||||||||||||||| |||||||||||||||||    
T  7349629 ttggaacaaatatcacactgaagatacgttt---ttttttctcattcagtgaaagaatatttgcctcaaaaatataatattctctttcaaaatatatttg 7349725  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||       ||||||||||||||||||    
T  7349726 catcaaatcgttcttcatgcgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagca 7349825  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 380  Q
    |||||||||| | |||||||| |||||||||||||||||| |||||| |||||||||| |||||||    
T  7349826 acaatattctccatccatcaatttttgagtcatactacaacattctccaccttgactctaaattag 7349891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 3035754 - 3035417
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  3035754 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 3035657  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||| || |||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3035656 ttggaacaaataccatactgaagatacgttttttttctttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 3035557  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  3035556 catcaaatcattcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 3035457  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  3035456 acaatattctccatccatcaaattttgagtcatactacaa 3035417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 31 - 380
Target Start/End: Complemental strand, 20299476 - 20299131
Alignment:
Q  31 cccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacgaatatca 129  Q
    |||||||||||||||||||||||||||||  |||||||   ||||||||||||||||||||||||| ||| |||||||||||||| |||||| |||| ||    
T  20299476 cccttgtttcagccccctctatctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaatatggaacaaatacca 20299379  T
Q  130 cactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtcctt 229  Q
    ||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  20299378 cactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttctt 20299282  T
Q  230 catacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttc 329  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | ||    
T  20299281 catacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaataaatcttttatatttttagcaacaatattctccatc 20299182  T
Q  330 catcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 380  Q
    ||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  20299181 catcaaattttgagtcatactacaacattctccaccttgactctaaattag 20299131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 1850014 - 1849667
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc----------aaagtttgctctgatacaaggtctatatttatagtgaaa-tata 104  Q
    |||||||||||||||||||||||||||||||||||||||||||| |          |||||||||| ||| |||||||||||||||||||| ||| ||||    
T  1850014 tgttgcctttctaaacccttgtttcagccccctctatctctctctctctctctctcaaagtttgctatgaaacaaggtctatatttatagtaaaagtata 1849915  T
Q  105 actcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaa 204  Q
    ||||||||||||||||| |||| |||||||||||| |||||         |||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  1849914 actcataaatttggaacaaataccacactgaagattcgttt--tttttttctccttcagtgaaagaatatctgcatcaaaaatataatattccctttcaa 1849817  T
Q  205 aatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttat 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||    
T  1849816 aatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttat 1849717  T
Q  305 atttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1849716 atttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 1849667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 16 - 380
Target Start/End: Complemental strand, 28487586 - 28487225
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    |||| |||||||||||||||||||||||||||||||||||||||  |||||||   |||||||| |||||||||||||||  ||| ||||||||||||||    
T  28487586 tgttacctttctaaacccttgtttcagccccctctatctctctc--aaagtttagcctgatacatggtctatatttataggaaaagtataactcataaat 28487489  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    || |||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28487488 ttagaacaaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 28487391  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  28487390 catcaaatcattcttcatacgatacaaaattatatttattgtccataaatatattttcagcacaaaatatatttgaagcaaatcttttatatttttagca 28487291  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 380  Q
    |||||||||| | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  28487290 acaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattag 28487225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 16 - 351
Target Start/End: Complemental strand, 20626071 - 20625739
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaa-atataactcataaat 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||  ||||||| |||||||||||||||| | || |||||||||||||||    
T  20626071 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagtctgatagaaggtctatatttataataaacatataactcataaat 20625974  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    |||||||||||| ||||||||||||||||||         |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  20625973 ttggaacgaataccacactgaagatacgttt--ttttttgctccttcagtgaaaaaatatttgcatcaaaaatataatattccctttcaaaatatatttg 20625876  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
     |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  20625875 tatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 20625776  T
Q  315 acaatattcttcttccatcaaattttgagtcatacta 351  Q
    |||||||||| | ||||||||||||||||||||||||    
T  20625775 acaatattctccatccatcaaattttgagtcatacta 20625739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 16 - 351
Target Start/End: Complemental strand, 20629962 - 20629630
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaa-atataactcataaat 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||  ||||||| |||||||||||||||| | || |||||||||||||||    
T  20629962 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagtctgatagaaggtctatatttataataaacatataactcataaat 20629865  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    |||||||||||| ||||||||||||||||||         |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  20629864 ttggaacgaataccacactgaagatacgttt--ttttttgctccttcagtgaaaaaatatttgcatcaaaaatataatattccctttcaaaatatatttg 20629767  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
     |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  20629766 tatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 20629667  T
Q  315 acaatattcttcttccatcaaattttgagtcatacta 351  Q
    |||||||||| | ||||||||||||||||||||||||    
T  20629666 acaatattctccatccatcaaattttgagtcatacta 20629630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 16 - 351
Target Start/End: Complemental strand, 20642381 - 20642049
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaa-atataactcataaat 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||  ||||||| |||||||||||||||| | || |||||||||||||||    
T  20642381 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagtctgatagaaggtctatatttataataaacatataactcataaat 20642284  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    |||||||||||| ||||||||||||||||||         |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  20642283 ttggaacgaataccacactgaagatacgttt--ttttttgctccttcagtgaaaaaatatttgcatcaaaaatataatattccctttcaaaatatatttg 20642186  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
     |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  20642185 tatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 20642086  T
Q  315 acaatattcttcttccatcaaattttgagtcatacta 351  Q
    |||||||||| | ||||||||||||||||||||||||    
T  20642085 acaatattctccatccatcaaattttgagtcatacta 20642049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 16 - 354
Target Start/End: Original strand, 7472236 - 7472572
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaa-atataactcataaat 114  Q
    |||||| |||||||||||||||||||||||||||||||||||||  |||||||  |||||||||||||||||||||||||| || |||||||||||||||    
T  7472236 tgttgcttttctaaacccttgtttcagccccctctatctctctc--aaagtttagtctgatacaaggtctatatttatagtaaacatataactcataaat 7472333  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||| ||||||||||||||||||         |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7472334 ttggaacaaataccacactgaagatacgttt-ttttttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 7472432  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  7472433 catcaaatcgttcttcatatgatacaataatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 7472532  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  7472533 acaatattctccatccatcaaattttgagtcatactacaa 7472572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 16 - 354
Target Start/End: Original strand, 7351908 - 7352244
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||   |||||||||||| |||||||||||| ||| ||||||||||||||    
T  7351908 tgttgcctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtttatatttatagtaaaagtataactcataaat 7352007  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||||||||||||||||||||||         ||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  7352008 ttggaacaaatatcacactgaagatacgttt---ttttttctcattcagtgaaagaatatttgcctcaaaaatataatattccctttcaaaatatatttg 7352104  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||       ||||||||||||||||||    
T  7352105 catcaaatcgttcttcatgcgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagca 7352204  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||| | |||||||| ||||||||||||||||||    
T  7352205 acaatattctccatccatcaatttttgagtcatactacaa 7352244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 16 - 380
Target Start/End: Original strand, 31156167 - 31156524
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||||||||||||||||||||||||||||||||||||      |||||||||  ||||||||| |||||||||||||| ||| |||| |||||||||    
T  31156167 tgttgcctttctaaacccttgtttcagccccctctatctc------aaagtttgccttgatacaagctctatatttatagtaaaagtatagctcataaat 31156260  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||| |||||||||||| |||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31156261 ttggaacaaataccacactgaagattcgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 31156358  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||       ||||||||||||||||||    
T  31156359 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagca 31156458  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 380  Q
    |||||||||| | |||||||| |||||||||||||||||| |||||| |||||||||| |||||||    
T  31156459 acaatattctccatccatcaatttttgagtcatactacaacattctccaccttgactctaaattag 31156524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 31 - 354
Target Start/End: Complemental strand, 11757246 - 11756927
Alignment:
Q  31 cccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacgaatatca 129  Q
    |||||||||||||||||||||||||||||  |||||||   ||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||| ||    
T  11757246 cccttgtttcagccccctctatctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaatacca 11757149  T
Q  130 cactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtcctt 229  Q
    ||||||||||||||||         |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||    
T  11757148 cactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatagttctt 11757052  T
Q  230 catacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttc 329  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | ||    
T  11757051 catacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatc 11756952  T
Q  330 catcaaattttgagtcatactacaa 354  Q
    |||||||||||||||||||||||||    
T  11756951 catcaaattttgagtcatactacaa 11756927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 47 - 354
Target Start/End: Complemental strand, 1606478 - 1606173
Alignment:
Q  47 ctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacgaatatcacactgaagatacgttt 145  Q
    |||||||||| || ||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||| |||| |||||||||||| |||||    
T  1606478 ctctatctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagattcgttt 1606379  T
Q  146 cnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaat 245  Q
             |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  1606378 ---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaat 1606282  T
Q  246 atatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtc 345  Q
    |||||||||||||||||||||||||||||||||| |||| ||||       |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1606281 atatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtc 1606182  T
Q  346 atactacaa 354  Q
    |||||||||    
T  1606181 atactacaa 1606173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 28485599 - 28485263
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    |||||||||||||||||||||||||| |||| ||||||||||||  |||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  28485599 tgttgcctttctaaacccttgtttcaaccccttctatctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 28485502  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||| |||||||||||||||| |         ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28485501 ttggaacaaataccacactgaagatacgtgt-tttttttcctccttcggtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 28485403  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       | ||||||||||||||||    
T  28485402 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatattttatatttttagca 28485303  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||||| ||||||||||||||| |||||||||||    
T  28485302 acaatattcttcatccatcaaattttgaatcatactacaa 28485263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 38394019 - 38393685
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  38394019 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 38393922  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||| |||||||||||||||||          | |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  38393921 ttggaacaaataccacactgaagatacgtt---attttttcaccttcagtgaaagaatatttgcatcaaaaatataacattccctttcaaaatatatttg 38393825  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||       |||| |||||||||||||    
T  38393824 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaataaattttcagcacaaaatatatttgaaacaaatcttatatatttttagca 38393725  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||| | |||||||||||| || |||||||||||    
T  38393724 acaatattctccatccatcaaatttagaatcatactacaa 38393685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 18345574 - 18345239
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    |||||||||||||||||||||||||| ||||||||||||| |||  ||||||    ||||||||||||||||||||||||| ||| ||||||||||||||    
T  18345574 tgttgcctttctaaacccttgtttcaaccccctctatctccctc--aaagttcagcctgatacaaggtctatatttatagtaaaagtataactcataaat 18345477  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  18345476 ttggaacaaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccatttcaaaatatatttg 18345379  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||| ||||       ||||||||||||||||||    
T  18345378 catcaaatcgttcttcatacggtacaaaaatatatttattgtcaataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagca 18345279  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  18345278 acaatattctccatccatcaaattttgagtcatactacaa 18345239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 47 - 380
Target Start/End: Complemental strand, 38396294 - 38395962
Alignment:
Q  47 ctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacgaatatcacactgaagatacgttt 145  Q
    |||| |||||||| |||| |||   ||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||| ||||| ||||||||||||    
T  38396294 ctctctctctctctcaaaatttagcctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacaccgaagatacgttt 38396195  T
Q  146 cnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaat 245  Q
             |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38396194 --tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaat 38396097  T
Q  246 atatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtc 345  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||| |||||    
T  38396096 atatttattgtacataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttggagtc 38395997  T
Q  346 atactacaaaattctcaaccttgactccaaattag 380  Q
    ||||||||| |||||| |||||||||| |||||||    
T  38395996 atactacaacattctccaccttgactctaaattag 38395962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 16 - 348
Target Start/End: Complemental strand, 24258496 - 24258166
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaatataactcataaatt 115  Q
    ||||||||||||||||||||||||||||||||||||||||      || |||| |||||||||||   |||||||||||| |||||||||||||||||||    
T  24258496 tgttgcctttctaaacccttgtttcagccccctctatctc------aatgtttactctgatacaaaacctatatttatagagaaatataactcataaatt 24258403  T
Q  116 tggaacgaatatcacac--tgaagatacgtttcnnnnnnnn---ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatata 210  Q
    |||||||||||||||||  ||||||||| ||||           |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  24258402 tggaacgaatatcacacactgaagatacatttctttatttttttctccttcagtgaaagaatatttacatcaaaaatataatattccctttcaaaatata 24258303  T
Q  211 tttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattttt 310  Q
    |||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||    
T  24258302 tttgcatcaa-tcgtccttcatactgtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttt 24258204  T
Q  311 agcaacaatattcttcttccatcaaattttgagtcata 348  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24258203 agcaacaatattcttcttccatcaaattttgagtcata 24258166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 16 - 354
Target Start/End: Original strand, 37412384 - 37412714
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||| ||||||||||||||||||||||||| ||||||       | |||| ||||||| ||||||||||||||||||| ||| ||||||||||||||    
T  37412384 tgttgccattctaaacccttgtttcagccccctatatctcc------aggtttactctgattcaaggtctatatttatagtaaaaatataactcataaat 37412477  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    |||||||||||| ||||||||||||||||||         ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  37412478 ttggaacgaataacacactgaagatacgttt---ttttttctccttcagtggaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 37412574  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||| | ||||||||| |||| || |||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  37412575 catcaaatcattcttcatacgttacataattatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 37412674  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  37412675 acaatattctccatccatcaaattttgagtcatactacaa 37412714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 24 - 354
Target Start/End: Original strand, 42331263 - 42331591
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacg 122  Q
    ||||||||||||||||||||||||||||||||      |||||||  |||||||||| ||||||||||||||| ||| ||||||||||||||||||||||    
T  42331263 ttctaaacccttgtttcagccccctctatctc------aaagtttagtctgatacaaagtctatatttatagtaaaagtataactcataaatttggaacg 42331356  T
Q  123 aatatcacactgaagatacgtttcnnnnnnnn---ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatca 219  Q
    |||| |||||| |||||||||||            |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42331357 aataccacactaaagatacgtttttttttttctttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatca 42331456  T
Q  220 aatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaat 319  Q
    |||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  42331457 aatcgttcttcatacggtacaaaaatatacttattgtccataaatatattttcagcacaaaatatatttaaaacaaatcttttatatttttagcaacaat 42331556  T
Q  320 attcttcttccatcaaattttgagtcatactacaa 354  Q
    ||||||| | ||||||||||| |||||||||||||    
T  42331557 attcttcattcatcaaattttaagtcatactacaa 42331591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 24 - 354
Target Start/End: Complemental strand, 21990175 - 21989855
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaat-ataactcataaatttggaacg 122  Q
    ||||||||||||||||||||||| ||||||||       | |||| ||||||| ||||||||||||||||||| |||| |||||||||||||||||||||    
T  21990175 ttctaaacccttgtttcagcccc-tctatctcc------aggtttactctgattcaaggtctatatttatagtaaaattataactcataaatttggaacg 21990083  T
Q  123 aatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaat 222  Q
    |||| ||||| ||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21990082 aataccacacagaagatacgttt--ttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 21989985  T
Q  223 cgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatatt 322  Q
    ||| ||||||||| |||||||||||||||||||||||||||||||||||||  ||| ||||| ||||       ||||||||||||||||||||||||||    
T  21989984 cgttcttcatacggtacaaaaatatatttattgtccataaatatattttca--acacaatatatttgaaacaaatcttttatatttttagcaacaatatt 21989887  T
Q  323 cttcttccatcaaattttgagtcatactacaa 354  Q
    || | |||||||||||||| ||||||||||||    
T  21989886 ctccatccatcaaattttgggtcatactacaa 21989855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 85 - 354
Target Start/End: Original strand, 21470614 - 21470881
Alignment:
Q  85 tatatttatagtgaaa-tataactcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaa 183  Q
    |||||||||||| ||| ||||||||||||||||||||| |||| ||||| ||||||||||||         |||||||||||||||||||||||||| ||    
T  21470614 tatatttatagtaaaagtataactcataaatttggaacaaataccacaccgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaa 21470710  T
Q  184 aaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaata 283  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21470711 aaatataatattccctttcaaaatatattcgcatcaaatcgttcttcatacgatataaaaatatatttattgtccataaatatattttcagcacaaaata 21470810  T
Q  284 tctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    | ||||       |||||||||||||||||||||||||||| | |||||||||||| |||||| |||||||    
T  21470811 tatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttggagtcaaactacaa 21470881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 16 - 284
Target Start/End: Original strand, 13099732 - 13099993
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||| |||||||||||||||||| |||||||||||||      || |||| || |||| ||||||||||||||||||| ||| ||||||||||||||    
T  13099732 tgttgccattctaaacccttgtttcaaccccctctatctc------aaggtttactttgattcaaggtctatatttatagtaaaagtataactcataaat 13099825  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    |||||||||||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13099826 ttggaacgaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 13099923  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatat 284  Q
     |||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  13099924 tatcaaatcgttcttcatacggtacgaaaatatatttattgtccataaatatattttcagcacaaaatat 13099993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 156 - 354
Target Start/End: Complemental strand, 47865528 - 47865330
Alignment:
Q  156 tccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattg 255  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  47865528 tccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattg 47865429  T
Q  256 tccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    ||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||    
T  47865428 tccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttggagtcatactacaa 47865330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 24 - 276
Target Start/End: Original strand, 43253780 - 43254035
Alignment:
Q  24 ttctaaacccttgtttcagccccct--ctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaa 120  Q
    ||||||| |||||||||||||| ||  || |||||||| ||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  43253780 ttctaaaaccttgtttcagccctctttctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaatttggaa 43253879  T
Q  121 cgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaa 220  Q
    | |||| ||||| |||||||| ||          |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  43253880 caaataccacaccgaagatactttcttattttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaa 43253979  T
Q  221 atcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 276  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  43253980 atcgttcttcatacgatacaaaaatatatttattgtccataaatatatttttagca 43254035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 16 - 252
Target Start/End: Complemental strand, 20297395 - 20297163
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||| ||||||||||||||||||||||||||||||||||||  |||||||   ||||||||||||| |||||| |||| ||| |||||||| |||||    
T  20297395 tgttgccattctaaacccttgtttcagccccctctatctctctc--aaagtttagcctgatacaaggtccatatttttagtaaaagtataactcgtaaat 20297298  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||| ||||||||||||||||||         ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20297297 ttggaacaaataccacactgaagatacgttt---ttttttctccttcggtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 20297201  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatattta 252  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  20297200 catcaaatcgttcttcatacgatacaaaaatatattta 20297163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 27 - 354
Target Start/End: Complemental strand, 3677301 - 3676999
Alignment:
Q  27 taaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaat-ataactcataaatttggaacgaat 125  Q
    |||||||||||||||||||| ||||||||       |||||| ||||||| |||| |||||||||||||| |||  ||||||||||||||||||||||||    
T  3677301 taaacccttgtttcagcccc-tctatctcc------aagtttactctgattcaagatctatatttatagtaaaaacataactcataaatttggaacgaat 3677209  T
Q  126 atcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgt 225  Q
    ||||||||||||||||||||         |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3677208 atcacactgaagatacgttttttttttctctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgt 3677109  T
Q  226 ccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattctt 325  Q
     ||||||||| |||||||||||                   |||||||||||||||||| ||||       ||||||||||||||||||||||||||||     
T  3677108 tcttcatacggtacaaaaatat-------------------attttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctc 3677028  T
Q  326 cttccatcaaattttgagtcatactacaa 354  Q
    | || ||||||||||||||||||||||||    
T  3677027 catctatcaaattttgagtcatactacaa 3676999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 208 - 354
Target Start/End: Complemental strand, 443474 - 443328
Alignment:
Q  208 atatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatt 307  Q
    ||||||||||||||| || ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||    
T  443474 atatttgcatcaaattgttcttcagacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatt 443375  T
Q  308 tttagcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||    
T  443374 tttagcaacaatattctccatccatcaaattttgagtcatactacaa 443328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 190 - 353
Target Start/End: Original strand, 40281824 - 40281989
Alignment:
Q  190 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttg 289  Q
    |||||||| ||| |||||||||  | |||||||  || |||||||| |||||||||||||||||| |||||||||||||||||| |||||||||| ||||    
T  40281824 aatattccttttaaaaatatatccgtatcaaatattctttcatacggtacaaaaatatatttattttccataaatatattttcaacacaaaatatatttg 40281923  T
Q  290 nnnnnnntcttttatatttttagcaacaa--tattcttcttccatcaaattttgagtcatactaca 353  Q
           | ||||||||||||||||||||  | |||||| ||||||||||||||||||||||||||    
T  40281924 aaacaaatattttatatttttagcaacaaattcttcttcatccatcaaattttgagtcatactaca 40281989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 48457686 - 48457604
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||    
T  48457686 tgttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttagcctgatacaaggtctatatttatagtgaaa 48457604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 44597 - 44523
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||    
T  44597 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatatttatagt 44523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 443628 - 443504
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||| ||||||||| |||||| ||| |||||||||||      || |||| ||||||| ||| ||||||||||||||| ||| ||||||||||||||    
T  443628 tgttgccattctaaaccattgttttagctccctctatctc------aaggtttactctgattcaaagtctatatttatagtaaaagtataactcataaat 443535  T
Q  115 ttggaacgaatatcacactgaagatacgttt 145  Q
    |||||||||||  ||||||||||||||||||    
T  443534 ttggaacgaattccacactgaagatacgttt 443504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 1049551 - 1049625
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||||| ||||||||||||||||||||||    
T  1049551 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctaatacaaggtctatatttatagt 1049625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 3878610 - 3878540
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 90  Q
    ||||| |||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||    
T  3878610 tgttgtctttctaaacccttgtttcagccccctctatctct----caaagtttgctctgatacaaggtctatatt 3878540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 27306485 - 27306559
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      |||||||| |||||||||||||||||||||||||||    
T  27306485 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttactctgatacaaggtctatatttatagt 27306559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 40946361 - 40946279
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    ||||||||||||||||||||||||||||||||||| || ||||  ||||||||||| ||| ||||||| ||||||||||||||||    
T  40946361 tgttgcctttctaaacccttgtttcagccccctctgtccctct--caaagtttgctatgaaacaaggtttatatttatagtgaaa 40946279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 35662 - 35588
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||| |||||| |||||||||||||||||||||||||||      |||||||||||||||||||||||||||||||||||    
T  35662 tgttgtctttctgaacccttgtttcagccccctctatctc------aaagtttgctctgatacaaggtctatatttatagt 35588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 9680852 - 9680773
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgc-tctgatacaaggtctatatttatagt 96  Q
    ||||||| |||||||||||||||||| ||||||||||||||||  ||| |||| | ||||||||||||||||||||||||||    
T  9680852 tgttgcccttctaaacccttgtttcaaccccctctatctctct--caaggtttacatctgatacaaggtctatatttatagt 9680773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 190 - 276
Target Start/End: Original strand, 12310442 - 12310528
Alignment:
Q  190 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 276  Q
    |||||||| ||| ||||||||||| ||||||||| ||||||||||| |||||||||||||| | ||||| ||| |||| ||||||||    
T  12310442 aatattccttttaaaaatatatttacatcaaatcttccttcatacggtacaaaaatatattaactgtccttaagtataatttcagca 12310528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 18567646 - 18567572
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||||||||||||||||||||||||| |||||||      |||||||| |||||||||||| ||||||||||||||    
T  18567646 tgttgcctttctaaacccttgtttcagccccttctatct------caaagtttactctgatacaagatctatatttatagt 18567572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 31435303 - 31435377
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||||||||||||||||||||||||| |||||||      |||||||| |||||||||||| ||||||||||||||    
T  31435303 tgttgcctttctaaacccttgtttcagccccttctatct------caaagtttactctgatacaagatctatatttatagt 31435377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 145
Target Start/End: Original strand, 40281688 - 40281756
Alignment:
Q  77 acaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgttt 145  Q
    ||||||| ||||||||||  |||||||||||||||||||||||||  ||||||| ||||||||||||||    
T  40281688 acaaggtttatatttataaagaaatataactcataaatttggaacagatatcacgctgaagatacgttt 40281756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 40836998 - 40837072
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||| ||||||||||||| |||||     |||| |||||||||||||||||||||||||||||||    
T  40836998 tgttgcctttctaaacccttctttcagccccctcaatctc-----caaa-tttgctctgatacaaggtctatatttatagt 40837072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 22392495 - 22392432
Alignment:
Q  27 taaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||      ||||||| |||||||||||||||||||||||||||    
T  22392495 taaacccttgtttcagccccctctatctc------aaagtttactctgatacaaggtctatatttatagt 22392432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 297 - 346
Target Start/End: Complemental strand, 20297157 - 20297108
Alignment:
Q  297 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 346  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||    
T  20297157 tcttttatatttttagcaacaatattctccatccatcaaattttgagtca 20297108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 25542563 - 25542490
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||| |||||||||||| ||||||||||||| ||||||||      |||||||||||||||||||||||||||||||||||    
T  25542563 tgttacctttctaaacctttgtttcagcccc-tctatctc------aaagtttgctctgatacaaggtctatatttatagt 25542490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 7188568 - 7188476
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaac 121  Q
    |||||||||||||||||||||||||||||||      ||| |||| ||||||||||| ||||||||||||||| ||| |||  |||||||| |||||||    
T  7188568 ttctaaacccttgtttcagccccctctatct------caaggtttactctgatacaaagtctatatttatagtaaaagtatccctcataaaattggaac 7188476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 11355291 - 11355252
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11355291 tgttgcctttctaaacccttgtttcagccccctctatctc 11355252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 20137365 - 20137404
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  20137365 tgttgcctttctaaacccttgtttcagccccctctatctc 20137404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 21678099 - 21678060
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  21678099 tgttgcctttctaaacccttgtttcagccccctctatctc 21678060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 21680060 - 21680021
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  21680060 tgttgcctttctaaacccttgtttcagccccctctatctc 21680021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 26804602 - 26804563
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26804602 tgttgcctttctaaacccttgtttcagccccctctatctc 26804563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 9679076 - 9679013
Alignment:
Q  32 ccttgtttcagccccctctatctctctcgcaaagtttgc-tctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||  |||||||| | ||||||||||| ||||||||||||||    
T  9679076 ccttgtttcagccccctctatctctct--caaagtttacatctgatacaagatctatatttatagt 9679013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 87 - 145
Target Start/End: Complemental strand, 10691083 - 10691025
Alignment:
Q  87 tatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgttt 145  Q
    ||||||||| |||||||||||||| ||||||||||  ||||||||| ||||||||||||    
T  10691083 tatttatagagaaatataactcatgaatttggaacagatatcacaccgaagatacgttt 10691025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 22251798 - 22251872
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||| |||||||||||| |||||||||      |||||||| ||||||| |||||| ||||||||||||    
T  22251798 tgttgcctttctaaactcttgtttcagcctcctctatct------caaagtttactctgattcaaggtttatatttatagt 22251872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 298 - 346
Target Start/End: Complemental strand, 10690732 - 10690684
Alignment:
Q  298 cttttatatttttagcaacaatattcttcttccatcaaattttgagtca 346  Q
    |||||||||||||||||||||| |||| | |||||||||||||||||||    
T  10690732 cttttatatttttagcaacaatcttctccctccatcaaattttgagtca 10690684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 1047180 - 1047223
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctc 59  Q
    |||||| ||||||||||| |||||||||||||||||||||||||    
T  1047180 tgttgcttttctaaacccctgtttcagccccctctatctctctc 1047223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 276
Target Start/End: Original strand, 12484976 - 12485023
Alignment:
Q  229 tcatacgatacaaaaatatatttattgtccataaatatattttcagca 276  Q
    |||||||||||||||||||||||  | |||||||||||||||||||||    
T  12484976 tcatacgatacaaaaatatatttgctatccataaatatattttcagca 12485023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 276
Target Start/End: Original strand, 12506407 - 12506454
Alignment:
Q  229 tcatacgatacaaaaatatatttattgtccataaatatattttcagca 276  Q
    |||||||||||||||||||||||  | |||||||||||||||||||||    
T  12506407 tcatacgatacaaaaatatatttgctatccataaatatattttcagca 12506454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 22828889 - 22828928
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  22828889 tgttgcctttctaaactcttgtttcagccccctctatctc 22828928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 38396349 - 38396306
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctc 59  Q
    ||||||||||||||||||||||||||||||||||  ||||||||    
T  38396349 tgttgcctttctaaacccttgtttcagccccctccctctctctc 38396306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 44724612 - 44724573
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  44724612 tgttgcctttctaaacccttgtttcagccccctatatctc 44724573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 43254023 - 43254069
Alignment:
Q  302 tatatttttagcaacaatattcttcttccatcaaattttgagtcata 348  Q
    ||||||||||||||||||||||| | |||||||||||||||| ||||    
T  43254023 tatatttttagcaacaatattctccatccatcaaattttgagacata 43254069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 10690854 - 10690773
Alignment:
Q  181 aaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataa 262  Q
    |||| ||| |||||||| ||| ||||||||||||||||||||  ||  ||| | | |||||||||||||||||||| |||||    
T  10690854 aaaatataaaatattccttttaaaaatatatttgcatcaaatattctgtcacatggtacaaaaatatatttattgtacataa 10690773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 96
Target Start/End: Complemental strand, 22108160 - 22108120
Alignment:
Q  56 tctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  22108160 tctctcaaagtttgctttgatacaaggtctatatttatagt 22108120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 96
Target Start/End: Complemental strand, 22137171 - 22137131
Alignment:
Q  56 tctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  22137171 tctctcaaagtttgctttgatacaaggtctatatttatagt 22137131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 24465575 - 24465543
Alignment:
Q  23 tttctaaacccttgtttcagccccctctatctc 55  Q
    |||||||||||||||||||||||||||||||||    
T  24465575 tttctaaacccttgtttcagccccctctatctc 24465543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 96
Target Start/End: Complemental strand, 40549920 - 40549880
Alignment:
Q  56 tctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  40549920 tctctcaaagtttgctttgatacaaggtctatatttatagt 40549880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 96
Target Start/End: Complemental strand, 40552198 - 40552158
Alignment:
Q  56 tctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  40552198 tctctcaaagtttgctttgatacaaggtctatatttatagt 40552158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 55
Target Start/End: Original strand, 4296199 - 4296230
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||||||||||||||||||    
T  4296199 ttctaaacccttgtttcagccccctctatctc 4296230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 276
Target Start/End: Original strand, 12657600 - 12657647
Alignment:
Q  229 tcatacgatacaaaaatatatttattgtccataaatatattttcagca 276  Q
    |||||||||||||||||||||||  | ||||| |||||||||||||||    
T  12657600 tcatacgatacaaaaatatatttgctatccatgaatatattttcagca 12657647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 21592399 - 21592438
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    |||||| |||||||||| ||||||||||||||||||||||    
T  21592399 tgttgcatttctaaacctttgtttcagccccctctatctc 21592438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 24748627 - 24748592
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctcta 51  Q
    ||||| ||||||||||||||||||||||||||||||    
T  24748627 tgttgtctttctaaacccttgtttcagccccctcta 24748592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 96
Target Start/End: Original strand, 9027401 - 9027434
Alignment:
Q  63 aagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||| ||||||||||||||||||||||||    
T  9027401 aagtttgctttgatacaaggtctatatttatagt 9027434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 96
Target Start/End: Complemental strand, 2935344 - 2935312
Alignment:
Q  64 agtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||| ||||||||||||||||||||||||    
T  2935344 agtttgctttgatacaaggtctatatttatagt 2935312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 230; Significance: 1e-127; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 608813 - 608472
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc--aaagtttgctctgatacaaggtctatatttatagtgaaatataactcataaa 113  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |  |||||||||| ||||| |||||||||||||| ||||||||||||||||||||    
T  608813 tgttgcatttctaaacccttgtttcagccccctctatctctctctctcaaagtttgctatgatataaggtctatatttacagtgaaatataactcataaa 608714  T
Q  114 tttggaacgaatatcacactgaagatacgtt-tcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatt 212  Q
    |||||||| |||||||||| ||||||||||| |         |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  608713 tttggaacaaatatcacaccgaagatacgttcttttttttttctccttcagtgaaagaatatttgcataaaatatataatattctctttcaaaatatatt 608614  T
Q  213 tgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttag 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||    
T  608613 tgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttag 608514  T
Q  313 caacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  608513 caacaatattcttcttccatcaaattttgagtgatactacaa 608472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 43530207 - 43529873
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    |||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  43530207 tgttgcttttctaaacccttgtttcagccccctctatctctctc--aaagtttgctctgatacaaggtctatatttatagtaaaagtataactcataaat 43530110  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||  |||| |||||||||||||| |||         ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43530109 ttggaataaataccacactgaagatactttt---ttttttctccttcagtgaaagaatattagcataaaaaatataatattccctttcaaaatatatttg 43530013  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  43530012 catcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 43529913  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  43529912 acaatattctccatccatcaaattttgagtcatactacaa 43529873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 16 - 354
Target Start/End: Original strand, 28283475 - 28283811
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  28283475 tgttgccattctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 28283574  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| ||||| |||||||||||||||||         |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  28283575 ttggaacaaatattacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattcactttcaaaatatatttg 28283671  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  28283672 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 28283771  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    | |||||||| | |||||||||||||||||||||||||||    
T  28283772 aaaatattctccatccatcaaattttgagtcatactacaa 28283811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 16 - 351
Target Start/End: Complemental strand, 15809298 - 15808967
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||||||||||||||||||||||||||||| ||||||||||  |||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  15809298 tgttgcctttctaaacccttgtttcagccccctttatctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 15809201  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  15809200 ttggaacaaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 15809104  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||       ||||||||||||||||||    
T  15809103 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcaacacaaaatatatttgaaacaaatcttttatatttttagca 15809004  T
Q  315 acaatattcttcttccatcaaattttgagtcatacta 351  Q
    |||||||||| | ||||||||||||||||||||||||    
T  15809003 acaatattctccatccatcaaattttgagtcatacta 15808967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 3874089 - 3873752
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||| |||||||||||||||||||||||||| |||||||||||  |||||||   ||||||||| ||||||||||||||| ||| ||||||||||||||    
T  3874089 tgttgtctttctaaacccttgtttcagcccccgctatctctctc--aaagtttagcctgatacaaagtctatatttatagtaaaagtataactcataaat 3873992  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||| ||||| ||||||| ||||         |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  3873991 ttggaacaaataccacaccgaagatatgttt-ttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttg 3873893  T
Q  215 catcaaatcg-tccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagc 313  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||||||||    
T  3873892 catcaaatcgtttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagc 3873793  T
Q  314 aacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    ||||||||||| | |||||||||||||||||||||||||||    
T  3873792 aacaatattctccatccatcaaattttgagtcatactacaa 3873752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 24 - 380
Target Start/End: Complemental strand, 41384815 - 41384469
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacg 122  Q
    ||||||||||||||||||||||| ||||||||      ||  ||| || |||| ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  41384815 ttctaaacccttgtttcagcccc-tctatctc------aatttttactttgattcaaggtctatatttatagtaaaagtataactcataaatttggaacg 41384723  T
Q  123 aatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaat 222  Q
    |||| ||||||||||||||||||          ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  41384722 aataccacactgaagatacgtttttttttt---tccttcaatgaaagaatatttgcataaaaa-tataatattccctttcaaaatatatttgcatcaaat 41384627  T
Q  223 cgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatatt 322  Q
    ||| ||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| || |       ||||||||||||||||||||||||||    
T  41384626 cgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagtataaaatatattcgaaacaaatcttttatatttttagcaacaatatt 41384527  T
Q  323 cttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 380  Q
    || | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  41384526 ctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattag 41384469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 24 - 354
Target Start/End: Complemental strand, 41382744 - 41382421
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacg 122  Q
    |||||||||||||||| |||||| ||||||||      || |||| ||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  41382744 ttctaaacccttgttttagccccatctatctc------aaggtttactctgattcaaggtctatatttatagtaaaagtataactcataaatttggaacg 41382651  T
Q  123 aatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaat 222  Q
    |||| ||||||||||||||||||         ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  41382650 aataccacactgaagatacgttt--tttttttctcattcagtgaaagaatatttgcataaaaaatataatatttcctttcaaaatatatttgcatcaaat 41382553  T
Q  223 cgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatatt 322  Q
    |||  |||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| || |       ||||||||||||||| ||||||||||    
T  41382552 cgttgttcatacggtacaaaaatatatttattgtccataaatatattttcagtataaaatatattcgaaacaaatcttttatatttttaacaacaatatt 41382453  T
Q  323 cttcttccatcaaattttgagtcatactacaa 354  Q
    || | |||||||||||||||||||||||||||    
T  41382452 ctccatccatcaaattttgagtcatactacaa 41382421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 198 - 354
Target Start/End: Complemental strand, 32339252 - 32339096
Alignment:
Q  198 ctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnnt 297  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       |    
T  32339252 ctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaat 32339153  T
Q  298 cttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  32339152 cttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 32339096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 16 - 205
Target Start/End: Complemental strand, 181616 - 181434
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||| |||||| |||||||||||||||||||||||||      |||||||  |||||||||| ||||||||||||||| ||| ||||||||||||||    
T  181616 tgttgccattctaagcccttgtttcagccccctctatctc------aaagtttagtctgatacaaagtctatatttatagtaaaagtataactcataaat 181523  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaa 205  Q
    |||||||||||| ||||||||||||||||||         |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  181522 ttggaacgaataccacactgaagatacgttt--ttttcttctcctttagtgaaagaatatttgcatcaaaaatataatattccctttcaaa 181434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 24873437 - 24873567
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  24873437 tgttgcctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 24873536  T
Q  115 ttggaacgaatatcacactgaagatacgttt 145  Q
    ||||||| ||||  |||||||||||||||||    
T  24873537 ttggaacaaatacaacactgaagatacgttt 24873567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 32339388 - 32339260
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  32339388 tgttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 32339291  T
Q  115 ttggaacgaatatcacactgaagatacgttt 145  Q
    ||||||| |||| ||||||||||||||||||    
T  32339290 ttggaacaaataccacactgaagatacgttt 32339260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 239 - 354
Target Start/End: Original strand, 3265635 - 3265750
Alignment:
Q  239 caaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaatt 338  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||    
T  3265635 caaacatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatt 3265734  T
Q  339 ttgagtcatactacaa 354  Q
    ||||||||||||||||    
T  3265735 ttgagtcatactacaa 3265750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 22684912 - 22685000
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc----aaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    ||||| ||||||||||||||||||||||| |||||||||||||| |    |||||||||||||||||||||||||||||||||||||||    
T  22684912 tgttgtctttctaaacccttgtttcagcctcctctatctctctctctctcaaagtttgctctgatacaaggtctatatttatagtgaaa 22685000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 14807830 - 14807756
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||    
T  14807830 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatatttatagt 14807756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 12517280 - 12517356
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||| ||||| ||||||    
T  12517280 tgttgcctttctaaacccttgtttcagccccctctatctct----caaagtttgctctgatacaaggtatatatatatagt 12517356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 3886174 - 3886248
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||| |||||||||||||||    
T  3886174 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaagtctatatttatagt 3886248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 4424097 - 4424023
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||||||||| |||||||||||||||||||||||      ||||||||||||||||||||||||| ||||||||||    
T  4424097 tgttgcctttctaaatccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctgtatttatagt 4424023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 15072789 - 15072715
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||  ||||||||||||||||||||||||||    
T  15072789 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttagtctgatacaaggtctatatttatagt 15072715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 18810787 - 18810713
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      | ||||||||||||||||||| ||||||||||||||    
T  18810787 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaagatctatatttatagt 18810713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 27827065 - 27826991
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      | |||||||||||||||||||| |||||||||||||    
T  27827065 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggcctatatttatagt 27826991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 27829376 - 27829302
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      | |||||||||||||||||||| |||||||||||||    
T  27829376 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggcctatatttatagt 27829302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 44720922 - 44720848
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||| ||||| ||||||||||||||||||    
T  44720922 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctttgatataaggtctatatttatagt 44720848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 14419447 - 14419541
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    |||||||||||||||||||||||||||||||||||||||      ||| |||| | ||||||||| ||||||||||||||| ||| ||| ||||||||||    
T  14419447 tgttgcctttctaaacccttgtttcagccccctctatct------caaggtttacactgatacaatgtctatatttatagtaaaagtatcactcataaat 14419540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 18812972 - 18812898
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||||||||||||||||||||||| |||||||||      | ||||||||||||||||||| ||||||||||||||    
T  18812972 tgttgcctttctaaacccttgtttcagcctcctctatct------ccaagtttgctctgatacaagatctatatttatagt 18812898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 26775280 - 26775206
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      ||| |||||||||||||||| | |||||||||||||    
T  26775280 tgttgcctttctaaacccttgtttcagccccctctatct------caaggtttgctctgatacaaagcctatatttatagt 26775206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 276
Target Start/End: Original strand, 11701364 - 11701447
Alignment:
Q  190 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 276  Q
    |||||||||||| ||||||||||| |||||| || |||   ||||| |||||||||||||||| || ||||||||||||||||||||    
T  11701364 aatattccctttaaaaatatatttacatcaattcttcc---atacggtacaaaaatatatttactgaccataaatatattttcagca 11701447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 35872627 - 35872708
Alignment:
Q  9 ccctagctgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||| |||||||||||||||||||||||||||||||||||||||      ||| |||| | ||||||||| |||||||||||||||    
T  35872627 ccctagttgttgcctttctaaacccttgtttcagccccctctatct------caaggtttacactgatacaatgtctatatttatagt 35872708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 13858740 - 13858814
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||| ||||||||||||      ||| |||| ||||||||||| |||||||||||||||    
T  13858740 tgttgcctttctaaacccttgtttcatccccctctatct------caaggtttactctgatacaaagtctatatttatagt 13858814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 14477355 - 14477281
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||| ||||||||||||      ||| |||||||||||||||| | |||||||||||||    
T  14477355 tgttgcctttctaaacccttgtttcaaccccctctatct------caaggtttgctctgatacaaagcctatatttatagt 14477281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 33541644 - 33541718
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      ||| |||| | ||||||||| |||||||||||||||    
T  33541644 tgttgcctttctaaacccttgtttcagccccctctatct------caatgtttacactgatacaatgtctatatttatagt 33541718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 5622994 - 5623033
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5622994 tgttgcctttctaaacccttgtttcagccccctctatctc 5623033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 273
Target Start/End: Original strand, 13986214 - 13986285
Alignment:
Q  202 caaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttca 273  Q
    |||||||||||||||||||||| || ||||| || ||||||||| |||| | | ||||||||||||||||||    
T  13986214 caaaatatatttgcatcaaatcttctttcatgcggtacaaaaatttattaactatccataaatatattttca 13986285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 25952600 - 25952561
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25952600 tgttgcctttctaaacccttgtttcagccccctctatctc 25952561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 27107153 - 27107192
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  27107153 tgttgcctttctaaacccttgtttcagccccctctatctc 27107192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 37214466 - 37214505
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37214466 tgttgcctttctaaacccttgtttcagccccctctatctc 37214505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 43082052 - 43082009
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctc 59  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  43082052 tgttgcttttctaaacccttgtttcagccccctctatctctctc 43082009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 36865617 - 36865579
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatct 54  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36865617 tgttgcctttctaaacccttgtttcagccccctctatct 36865579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 1225245 - 1225206
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  1225245 tgttgtctttctaaacccttgtttcagccccctctatctc 1225206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 15068060 - 15068021
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  15068060 tgttgcctttctaaacccttgtttcagccccttctatctc 15068021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 346
Target Start/End: Original strand, 13986328 - 13986374
Alignment:
Q  300 tttatatttttagcaacaatattcttcttccatcaaattttgagtca 346  Q
    |||||||||||||||||||| |||||| ||||| |||||||||||||    
T  13986328 tttatatttttagcaacaatcttcttcatccataaaattttgagtca 13986374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 346
Target Start/End: Original strand, 11701435 - 11701479
Alignment:
Q  302 tatatttttagcaacaatattcttcttccatcaaattttgagtca 346  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||    
T  11701435 tatattttcagcaacaatcttcttcgtccatcaaattttgagtca 11701479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 5372434 - 5372472
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  5372434 tgttgcctttctaaacccttgtttcag-cccctctatctc 5372472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 55
Target Start/End: Complemental strand, 27911086 - 27911055
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||||||||||||||||||    
T  27911086 ttctaaacccttgtttcagccccctctatctc 27911055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 55
Target Start/End: Complemental strand, 27957505 - 27957474
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||||||||||||||||||    
T  27957505 ttctaaacccttgtttcagccccctctatctc 27957474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 30480759 - 30480798
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    |||||||||||||||||||||||||| |||| ||||||||    
T  30480759 tgttgcctttctaaacccttgtttcaaccccttctatctc 30480798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 43079681 - 43079639
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctc 59  Q
    |||||| ||||||||||||||||||||||||| |||||||||||    
T  43079681 tgttgcttttctaaacccttgtttcagccccc-ctatctctctc 43079639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 346
Target Start/End: Original strand, 30679208 - 30679256
Alignment:
Q  297 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 346  Q
    |||||| |||||||| ||||| |||||||| |||||||||||||||||||    
T  30679208 tcttttttatttttaccaaca-tattcttcatccatcaaattttgagtca 30679256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 21480586 - 21480554
Alignment:
Q  23 tttctaaacccttgtttcagccccctctatctc 55  Q
    |||||||||||||||||||||||| ||||||||    
T  21480586 tttctaaacccttgtttcagccccatctatctc 21480554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 230; Significance: 1e-127; HSPs: 85)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 16 - 380
Target Start/End: Original strand, 31735779 - 31736139
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    |||||||||||||||||||||||| |||||||||||||||  ||  |||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  31735779 tgttgcctttctaaacccttgttttagccccctctatctcattc--aaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 31735876  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31735877 ttggaacaaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 31735973  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  31735974 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 31736073  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 380  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  31736074 acaatattctccttccatcaaattttgagtcatactacaacattctccaccttgactctaaattag 31736139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 47906293 - 47905958
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  47906293 tgttgccattctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 47906194  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||| |||||||||||||| |||         |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  47906193 ttggaacaaataccacactgaagatactttt----tttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 47906098  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  47906097 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 47905998  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  47905997 acaatattctccatccatcaaattttgagtcatactacaa 47905958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 16 - 354
Target Start/End: Original strand, 15295092 - 15295437
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc--------aaagtttgctctgatacaaggtctatatttatagtgaa-atataac 106  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |        ||||||||||||||||||||||||||||||||||| || |||||||    
T  15295092 tgttgcctttctaaacccttgtttcagccctctctatctctctctctctctctcaaagtttgctctgatacaaggtctatatttatagtaaacatataac 15295191  T
Q  107 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 206  Q
    ||||||||| |||||||||| |||||||||||||| |||         |||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  15295192 tcataaattaggaacgaataccacactgaagatacattt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattcgctttcaaaa 15295289  T
Q  207 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 306  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  15295290 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 15295389  T
Q  307 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15295390 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 15295437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 16 - 354
Target Start/End: Original strand, 9463502 - 9463838
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  9463502 tgttgcctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 9463601  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||| |||| |||||||||||||         |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9463602 ttggaacaaataccacaatgaagatacgttt---ttttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 9463698  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||| |||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  9463699 cattaaattgttcttcatacgatataaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 9463798  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  9463799 acaatattctccatccatcaaattttgagtcatactacaa 9463838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 24325686 - 24325349
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc--aaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataa 112  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  24325686 tgttgcctttctaa-cccttgtttcagccccctctatctctctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagtataactcataa 24325588  T
Q  113 atttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatt 212  Q
    ||||||||| |||| |||||| ||||||| |||         |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  24325587 atttggaacaaataccacactaaagatacattt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattcactttcaaaatatatt 24325491  T
Q  213 tgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttag 312  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||       ||||||||||||||||    
T  24325490 tgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttag 24325391  T
Q  313 caacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||||| | |||||||||||||||||||||||||||    
T  24325390 caacaatattctccatccatcaaattttgagtcatactacaa 24325349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 39932096 - 39931764
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaa-atataactcataaat 114  Q
    ||||||||||||||||||||||||||||||||||||||||||    |||||||  ||| |||||||||||||||||||||| || |||||||||||||||    
T  39932096 tgttgcctttctaaacccttgtttcagccccctctatctctc----aaagttttgtctcatacaaggtctatatttatagtaaacatataactcataaat 39932001  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||||||||  |||||||||||||||||         |||||||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  39932000 ttggaacgaatactacactgaagatacgttt---ttttttctccttcaataaaagaatatttgcatcaaaagtataatattccctttcaaaatatatttg 39931904  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  39931903 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 39931804  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  39931803 acaatattctccatccatcaaattttgagtcatactacaa 39931764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 16 - 354
Target Start/End: Original strand, 9459675 - 9460011
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  9459675 tgttgactttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 9459774  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||| |||| |||||||||||||         |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9459775 ttggaacaaataccacaatgaagatacgttt---ttttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 9459871  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||| |||| || ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  9459872 cattaaattgttcttcatacggtataaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 9459971  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  9459972 acaatattctccatccatcaaattttgagtcatactacaa 9460011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 16 - 324
Target Start/End: Original strand, 21948445 - 21948751
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaa-atataactcataaat 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||  | |||||||||||||||||||||||| || |||||||||||||||    
T  21948445 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagtatgatacaaggtctatatttatagtaaacatataactcataaat 21948542  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    |||||||||||| ||||||||||||||||||         ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  21948543 ttggaacgaataccacactgaagatacgttt-tttttttcctccttctgtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 21948641  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  21948642 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 21948741  T
Q  315 acaatattct 324  Q
    ||||||||||    
T  21948742 acaatattct 21948751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 16 - 380
Target Start/End: Original strand, 27337196 - 27337556
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||   || |||||||||||||||||||||| ||| |||||| |||||||    
T  27337196 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagcctaatacaaggtctatatttatagtaaaagtataacgcataaat 27337293  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||| ||||  ||||||||||||          ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27337294 ttggaacaaataccacatcgaagatacgtttttttttt---tccttcagttaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 27337390  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||| |||||||||||||    
T  27337391 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttatatatttttagca 27337490  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 380  Q
    |||||||||  | |||||||||||| |||||||||||||| |||||| |||||||||| |||||||    
T  27337491 acaatattccccatccatcaaatttggagtcatactacaacattctccaccttgactctaaattag 27337556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 16 - 354
Target Start/End: Original strand, 27339388 - 27339728
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    |||||||||||||| |||||||||||||||||||||||||||||  |||||||   || |||||||||||||||||||||| ||| ||||||||||||||    
T  27339388 tgttgcctttctaagcccttgtttcagccccctctatctctctc--aaagtttagcctaatacaaggtctatatttatagtaaaagtataactcataaat 27339485  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||| ||||||||||||||||| |         ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27339486 ttggaacaaataccacactgaagatacgtt-cttttttttttccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 27339584  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataa----atatattttcagcacaaaatatctttgnnnnnnntcttttatattttt 310  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||| ||||       ||||||||||||||    
T  27339585 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatatattttcagcacaaaatatatttgaaacaaatcttttatattttt 27339684  T
Q  311 agcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||||||| | ||| |||||||| ||||||||||||||    
T  27339685 agcaacaatattctccatccgtcaaatttggagtcatactacaa 27339728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 16 - 354
Target Start/End: Original strand, 17324894 - 17325225
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||| |||||||||||||||| |||||||| |||||   ||   | |||| ||||| | ||||||||||||||||||| ||| ||||||||||||||    
T  17324894 tgttgccattctaaacccttgttttagccccctgtatct---tc---aggtttactctggttcaaggtctatatttatagtaaaagtataactcataaat 17324987  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    |||||||||||||||| ||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17324988 ttggaacgaatatcaccctgaagatacgttt--tttttttctccttcagtgaaagaatatttgcataaaaaatataatattcccttgcaaaatatatttg 17325085  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    |||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||| | |||||||| ||||       ||||||||||||||||||    
T  17325086 catcaaatcgtttttcatacggtacaaaaatatatttattgtccataaatatattttcaactcaaaatatatttgaaacaaatcttttatatttttagca 17325185  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  17325186 acaatattctccatccatcaaattttgagtcatactacaa 17325225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 48665200 - 48664854
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    |||||||||||||||||||||||||| |||||||   |||| ||  || |||| ||||||| ||||||||||||||||||| ||| ||||||||||||||    
T  48665200 tgttgcctttctaaacccttgtttcaaccccctccccctctatcttaaggtttactctgattcaaggtctatatttatagtaaaagtataactcataaat 48665101  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctc-------cttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaat 207  Q
    ||||||| ||||  |||||||||||||||||          |        ||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  48665100 ttggaacaaatactacactgaagatacgttttttttttttttttttctttcttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaat 48665001  T
Q  208 atatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatt 307  Q
    |||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||    
T  48665000 atatgtgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatt 48664901  T
Q  308 tttagcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||    
T  48664900 tttagcaacaatattctccatccatcaaattttgagtcatactacaa 48664854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 24 - 354
Target Start/End: Original strand, 28998519 - 28998842
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacg 122  Q
    ||||||||||||||||||||| ||||||||||      ||||||| ||||||| ||| ||||||||||||||| ||| ||||||||||||||||||||||    
T  28998519 ttctaaacccttgtttcagcctcctctatctc------aaagtttactctgattcaaagtctatatttatagtaaaagtataactcataaatttggaacg 28998612  T
Q  123 aatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaat 222  Q
    |||| |||||| || ||||| ||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28998613 aataccacactaaatatacggtt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 28998710  T
Q  223 cgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatatt 322  Q
      | |||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||        ||||||||| ||||||||||||||||    
T  28998711 atttcttcgtacggtacaaaaatgtatttattgtccataaatatattttcagcacaaaatatattttaaacaaatcttttatagttttagcaacaatatt 28998810  T
Q  323 cttcttccatcaaattttgagtcatactacaa 354  Q
    || | |||||||||||||||||||||||||||    
T  28998811 ctccatccatcaaattttgagtcatactacaa 28998842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 24 - 354
Target Start/End: Original strand, 29004235 - 29004558
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacg 122  Q
    ||||||||||||||||||||| ||||||||||      ||||||| ||||||| ||| ||||||||||||||| ||| ||||||||||||||||||||||    
T  29004235 ttctaaacccttgtttcagcctcctctatctc------aaagtttactctgattcaaagtctatatttatagtaaaagtataactcataaatttggaacg 29004328  T
Q  123 aatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaat 222  Q
    |||| |||||| || ||||| ||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  29004329 aataccacactaaatatacggtt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 29004426  T
Q  223 cgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatatt 322  Q
      | |||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||        ||||||||| ||||||||||||||||    
T  29004427 atttcttcgtacggtacaaaaatgtatttattgtccataaatatattttcagcacaaaatatattttaaacaaatcttttatagttttagcaacaatatt 29004526  T
Q  323 cttcttccatcaaattttgagtcatactacaa 354  Q
    || | |||||||||||||||||||||||||||    
T  29004527 ctccatccatcaaattttgagtcatactacaa 29004558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 24 - 351
Target Start/End: Original strand, 2949497 - 2949810
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacg 122  Q
    ||||||||||||||||||||||||||||||||      || |||| ||| ||| |||  ||||||||||| || ||| ||||||||||||||||||||||    
T  2949497 ttctaaacccttgtttcagccccctctatctc------aaggttttctcggattcaatatctatatttattgtaaaagtataactcataaatttggaacg 2949590  T
Q  123 aatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaat 222  Q
    |||| ||      ||||||||||         ||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  2949591 aatacca------agatacgttt--tttttttctc-ttcagtgaaagaatatttgtatcaaaaatataatattccctttcaaaatatatttgcatcaaat 2949681  T
Q  223 cgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatatt 322  Q
    | | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||||||||||    
T  2949682 cattcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatatt 2949781  T
Q  323 cttcttccatcaaattttgagtcatacta 351  Q
    |||| ||||| ||||||||||||||||||    
T  2949782 cttcatccatgaaattttgagtcatacta 2949810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 171 - 354
Target Start/End: Original strand, 6115532 - 6115716
Alignment:
Q  171 atatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattt 270  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6115532 atatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtcattcatacgatacaaaaatatatttattgtccataaatatattt 6115631  T
Q  271 tcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaa-ttttgagtcatactacaa 354  Q
    |||||||||||||| ||||       |||||||||||||||||||||||||||| | ||||||||| ||||||||||| ||||||    
T  6115632 tcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttttgagtcatcctacaa 6115716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 166 - 354
Target Start/End: Original strand, 45693834 - 45694022
Alignment:
Q  166 aaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaata 265  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  45693834 aaagaatatttgcataaaaaatatattattctctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaata 45693933  T
Q  266 tattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||| |||||||||||| ||||       |||||||||||||||||||||||||||| | ||||||||||||||| ||||| |||||    
T  45693934 tatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgaatcatagtacaa 45694022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 164 - 354
Target Start/End: Original strand, 4131690 - 4131880
Alignment:
Q  164 tgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatattta-ttgtccataa 262  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||    
T  4131690 tgaaagaatatttgcatcaaaa-tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttatttgtccataa 4131788  T
Q  263 atatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||| |||| |||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  4131789 atatatgttcaacacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 4131880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 17 - 234
Target Start/End: Original strand, 2510583 - 2510801
Alignment:
Q  17 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatt 115  Q
    ||||||||| ||||||||||||||||||||||||||||||||  ||||||||   ||||||||||||||||||||||||| ||| |||||||||||||||    
T  2510583 gttgcctttataaacccttgtttcagccccctctatctctct--caaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaatt 2510680  T
Q  116 tggaacgaatatcacactgaagatacg--tttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatattt 213  Q
    |||||| |||| ||||||||| |||||  |||         |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  2510681 tggaacaaataccacactgaaaatacgttttttttctttccctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatattt 2510780  T
Q  214 gcatcaaatcgtccttcatac 234  Q
    |||||||||||| ||||||||    
T  2510781 gcatcaaatcgttcttcatac 2510801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 47 - 244
Target Start/End: Original strand, 46432011 - 46432207
Alignment:
Q  47 ctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacgaatatcacactgaagatacgttt 145  Q
    |||| |||||||| ||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||| |||| |||||||||||||    
T  46432011 ctctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacagtgaagatacgttt 46432110  T
Q  146 cnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaa 244  Q
             |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  46432111 --tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaa 46432207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 168 - 380
Target Start/End: Complemental strand, 6997395 - 6997190
Alignment:
Q  168 agaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatata 267  Q
    ||||||||||||| ||||||||||||||| |||||||      ||||||||||||||| ||||||||| || ||||||||||||||||||||||| ||||    
T  6997395 agaatatttgcatcaaaaatataatattctctttcaa------tttgcatcaaatcgttcttcatacggtataaaaatatatttattgtccataa-tata 6997303  T
Q  268 ttttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaacctt 367  Q
    |||| |||||||||||| ||||       ||||||||||||||||||| |||||||| | |||||||||||||||||||||||| || |||||| |||||    
T  6997302 tttttagcacaaaatatatttgaaacaaatcttttatatttttagcaataatattctccatccatcaaattttgagtcatactataacattctccacctt 6997203  T
Q  368 gactccaaattag 380  Q
    ||||| |||||||    
T  6997202 gactctaaattag 6997190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 158 - 318
Target Start/End: Complemental strand, 6996221 - 6996067
Alignment:
Q  158 cttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtc 257  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||      ||| ||||||||||| ||||||||| ||||||||||||| |||||||    
T  6996221 cttcagtgaaagaatatttgcaacaaaaatataatattccctttcaa------tttacatcaaatcgttcttcatacggtacaaaaatatatgtattgtc 6996128  T
Q  258 cataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaa 318  Q
    ||||||||||||||||||||||||||| ||||       ||||||||||||||||||||||    
T  6996127 cataaatatattttcagcacaaaatatatttgaaacaagtcttttatatttttagcaacaa 6996067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 65 - 222
Target Start/End: Original strand, 26520419 - 26520580
Alignment:
Q  65 gtttgctctgatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgtttc----nnnnnnnnctcctt 160  Q
    |||| ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||            || |||    
T  26520419 gtttactctgatacaaagtctatatttatagagaaatataacttataaatttggaacgaatatcacactgaagatacatttcttttgtttttttcttctt 26520518  T
Q  161 cagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaat 222  Q
    | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26520519 cggtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 26520580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 241 - 354
Target Start/End: Original strand, 46432521 - 46432634
Alignment:
Q  241 aaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaatttt 340  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||||    
T  46432521 aaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttt 46432620  T
Q  341 gagtcatactacaa 354  Q
    ||||||||||||||    
T  46432621 gagtcatactacaa 46432634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 203 - 354
Target Start/End: Complemental strand, 16561284 - 16561133
Alignment:
Q  203 aaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntctttt 302  Q
    ||||||||||||  ||||||  ||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||| ||||       | ||||    
T  16561284 aaaatatatttgtttcaaatattccttcatacggtacaaaaagatatttattgtcaataaatatattttcagcacaaaatatatttgaaacaaatatttt 16561185  T
Q  303 atatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||| ||||    
T  16561184 atatttttagcaacaatattcttcatccaacaaattttgaatcatacaacaa 16561133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 276
Target Start/End: Original strand, 11693580 - 11693666
Alignment:
Q  190 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 276  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11693580 aatattccctttaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatttattgtccataaatatattttcagca 11693666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 74 - 217
Target Start/End: Original strand, 6115395 - 6115541
Alignment:
Q  74 gatacaaggtctatatttatagtgaaatataac--tcataaatttggaacgaatatcacactgaa---gatacgtttcnnnnnnnnctccttcagtgaaa 168  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||| |    |||||||||         |||||||| |||||    
T  6115395 gatacaaggtctatatttatagagaaatataacgctcataaatttggaacgaatatcacactaatagtgatacgttt--tttttttctccttcaatgaaa 6115492  T
Q  169 gaatatttgcataaaaaatataatattccctttcaaaatatatttgcat 217  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6115493 gaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 6115541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 190 - 276
Target Start/End: Original strand, 13785662 - 13785748
Alignment:
Q  190 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 276  Q
    |||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||| | || ||||||||||||||||||    
T  13785662 aatattccttttaaaaatatatttgcatcaaatcttccttcatacgatacaaaaatatatttactatctataaatatattttcagca 13785748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 47177385 - 47177307
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||| ||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||    
T  47177385 tgttgcttttctaaacccttgtttcagccccctctatctctct--caaagtttgctttgatacaaggtctatatttatagt 47177307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 47179736 - 47179658
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||| ||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||    
T  47179736 tgttgcttttctaaacccttgtttcagccccctctatctctct--caaagtttgctttgatacaaggtctatatttatagt 47179658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 73 - 273
Target Start/End: Complemental strand, 14352946 - 14352759
Alignment:
Q  73 tgatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtg-aaagaa 171  Q
    ||||||| | ||| ||||||||| |||||||||||| |||||||||||| |||||||| ||||||||||||||          |||||||  | |||  |    
T  14352946 tgatacatgatctgtatttatagagaaatataactcgtaaatttggaacaaatatcacgctgaagatacgttt-------tcttccttcaacgcaaaata 14352854  T
Q  172 tatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatatttt 271  Q
    ||||||||| |       |||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||| | | ||||||||||||||    
T  14352853 tatttgcatca-------aatattccctttaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatttactattcataaatatatttt 14352761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 28842518 - 28842442
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||| ||||||||||||    
T  28842518 tgttgcctttctaaacccttgtttcagccccctctatctct----caaagtttgctctgatacaaggtttatatttatagt 28842442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 20302482 - 20302410
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttata 94  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||    
T  20302482 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatatttata 20302410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 2617539 - 2617461
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    ||||| ||||||||||||||||||||||| ||||||||||      |||||||||||||||||||||||||||||||||||||||    
T  2617539 tgttgtctttctaaacccttgtttcagcctcctctatctc------aaagtttgctctgatacaaggtctatatttatagtgaaa 2617461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 51750062 - 51749988
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      | ||||||||||||||||||||||||||||||||||    
T  51750062 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggtctatatttatagt 51749988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 146
Target Start/End: Complemental strand, 16561490 - 16561367
Alignment:
Q  23 tttctaaacccttgttt-cagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaatataactcataaatttggaac 121  Q
    ||||||| ||||||||| ||||| | |||| ||||||| ||| ||||  ||||||| ||||| ||||||||||| ||||||||||||||||||||| |||    
T  16561490 tttctaatcccttgttttcagcctc-tctacctctctctcaaggtttcatctgatataaggtttatatttatagagaaatataactcataaatttgaaac 16561392  T
Q  122 gaatatcacactgaagatacgtttc 146  Q
    | ||||||| ||||||||| |||||    
T  16561391 ggatatcacgctgaagataagtttc 16561367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 25127895 - 25127808
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgc-tctgatacaaggtctatatttatagtgaaata 102  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| |||| | ||| ||||||||| ||||||||||| ||||||    
T  25127895 tgttgcctttctaaacccttgtttcaggcccctctatctctctctcaaggtttacatctaatacaaggtttatatttatagagaaata 25127808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 28840703 - 28840627
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||| ||||||||||||||||||||| |||||| ||||||||    |||||||||||||||||||||||||||||||||||    
T  28840703 tgtttcctttctaaacccttgtttcatccccctgtatctctc----aaagtttgctctgatacaaggtctatatttatagt 28840627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 6823038 - 6822971
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatat 89  Q
    |||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||||||||||    
T  6823038 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatat 6822971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 12302763 - 12302842
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgc-tctgatacaaggtctatatttatagt 96  Q
    |||||| ||||||||||||||||||||||||||||||||||||  ||| |||| | ||||||||||||||||||||||||||    
T  12302763 tgttgcatttctaaacccttgtttcagccccctctatctctct--caaggtttacatctgatacaaggtctatatttatagt 12302842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 13215104 - 13215030
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      |||| ||| |||||||||||||||||||||||||||    
T  13215104 tgttgcctttctaaacccttgtttcagccccctctatct------caaaatttactctgatacaaggtctatatttatagt 13215030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 13761860 - 13761786
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||| ||||||||      | ||||||||||||||||||||||||||||||||||    
T  13761860 tgttgcctttctaaacccttgtttcagccctctctatct------ccaagtttgctctgatacaaggtctatatttatagt 13761786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 41646943 - 41646869
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||| ||||||||||||||||||      |||||||| |||||||||||||||||||||||||||    
T  41646943 tgttgcctttctaaacccttatttcagccccctctatct------caaagtttactctgatacaaggtctatatttatagt 41646869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 6995958 - 6996063
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||||||||||||| ||||||| ||||||||||||||      ||  ||| ||||||| ||||||||||||||||| | ||| ||||||||||||||    
T  6995958 tgttgcctttctaaaccgttgtttcggccccctctatctc------aagatttactctgattcaaggtctatatttataataaaagtataactcataaat 6996051  T
Q  115 ttggaacgaata 126  Q
    ||||||||||||    
T  6996052 ttggaacgaata 6996063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 97 - 273
Target Start/End: Complemental strand, 10115738 - 10115572
Alignment:
Q  97 gaaatataactcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtg-aaagaatatttgcataaaaaatataatatt 195  Q
    |||||||||||||||||||||||||| ||||||| ||||||||| ||||         ||| ||||||| ||| ||||||||||| |||       ||||    
T  10115738 gaaatataactcataaatttggaacggatatcacgctgaagatatgttt--ttttttcctcattcagtgcaaaaaatatttgcatcaaa-------tatt 10115648  T
Q  196 ccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttca 273  Q
    || ||| ||||||||||||||||||||  |||||||||||  | ||||  ||||||||||||||||||||||||||||    
T  10115647 ccgtttaaaaatatatttgcatcaaatattccttcatacgggataaaa--atatttattgtccataaatatattttca 10115572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 6823908 - 6823840
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatat 89  Q
    ||||||||||||||||||||||||||||||||     |||| || |||||||||||||||||||||||||||||    
T  6823908 tgttgcctttctaaacccttgtttcagccccc-----ctctatctcaaagtttgctctgatacaaggtctatat 6823840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 15823569 - 15823495
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||||||||||||||||||||||||||| |||||||      |||||| || ||||||||||||||||||||||||    
T  15823569 tgttgcctttctaaacccttgtttcagccccctttatctct------aagtttactttgatacaaggtctatatttatagt 15823495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 16231624 - 16231550
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||| |||||| ||||||||||||||||||||||||||      |||||||||| ||||||||||||||||||||||||    
T  16231624 tgttgcttttctagacccttgtttcagccccctctatctc------aaagtttgctttgatacaaggtctatatttatagt 16231550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 28207324 - 28207398
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||| |||||||||||||||||||||||||||||||||      ||||||||  ||||||||||||||||||||||||||    
T  28207324 tgttgtctttctaaacccttgtttcagccccctctatct------caaagtttagtctgatacaaggtctatatttatagt 28207398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 38925736 - 38925810
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||| ||| ||||||||||||||||||||||      |||||||| |||||||||||||||||||||||||||    
T  38925736 tgttgcctttctgaactcttgtttcagccccctctatct------caaagtttactctgatacaaggtctatatttatagt 38925810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 51752388 - 51752314
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||| ||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  51752388 tgttacctttctaaactcttgtttcagccccctctatctcc------aagtttgctctgatacaaggtctatatttatagt 51752314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 10400094 - 10400159
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatag 95  Q
    |||||||||||||||||||||||||||||||| |      ||||||||||||||||||||||||||||||||    
T  10400094 ttctaaacccttgtttcagccccctctatctccc------agtttgctctgatacaaggtctatatttatag 10400159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 276
Target Start/End: Complemental strand, 32260883 - 32260833
Alignment:
Q  226 ccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 276  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  32260883 ccttcatacggtacaaaaatatatttattgttcataaatatattttcagca 32260833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 16226190 - 16226116
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||| ||||||||||||||||| || ||||||||||||      |||||||||| ||||||||||||||||||||||||    
T  16226190 tgttgcttttctaaacccttgttttagacccctctatctc------aaagtttgctttgatacaaggtctatatttatagt 16226116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 20291480 - 20291406
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||| | ||||||||||      |||| |||||||| ||||||||||||||||||||||    
T  20291480 tgttgcctttctaaacccttgtttcatctccctctatct------caaaatttgctctaatacaaggtctatatttatagt 20291406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 297 - 346
Target Start/End: Complemental strand, 32260795 - 32260746
Alignment:
Q  297 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 346  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  32260795 tcttttatatttttagcaacaatcttcttcatccatcaaattttgagtca 32260746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 47451671 - 47451597
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||| ||| |||||||||||| |||||||||||||||      ||||||| |||||||||||||||||||||||||||    
T  47451671 tgttgccattccaaacccttgtttaagccccctctatctc------aaagtttactctgatacaaggtctatatttatagt 47451597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 18307132 - 18307059
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatag 95  Q
    |||||||||||||||||||||||||||||||||||||||      ||| |||| | ||||||||| ||||||||||||||    
T  18307132 tgttgcctttctaaacccttgtttcagccccctctatct------caaggtttacactgatacaatgtctatatttatag 18307059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 25248772 - 25248841
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattt 91  Q
    |||||||||||||||||||||||||||||||||||||||      ||| |||| ||||||||||| ||||||||||    
T  25248772 tgttgcctttctaaacccttgtttcagccccctctatct------caaggtttactctgatacaaagtctatattt 25248841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 17186386 - 17186458
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttata 94  Q
    |||||||||||||||||||| ||||||||||||||||||      ||| ||||||||||||||||  ||||||||||||    
T  17186386 tgttgcctttctaaacccttatttcagccccctctatct------caaggtttgctctgatacaaaatctatatttata 17186458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 17318916 - 17318877
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17318916 tgttgcctttctaaacccttgtttcagccccctctatctc 17318877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 31423132 - 31423171
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  31423132 tgttgcctttctaaacccttgtttcagccccctctatctc 31423171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 39462540 - 39462464
Alignment:
Q  18 ttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    |||| |||||||||| |||||||||||  |||||||||      ||||||| |||||||||||||||||||||||||||||||    
T  39462540 ttgcatttctaaacctttgtttcagccttctctatctc------aaagtttactctgatacaaggtctatatttatagtgaaa 39462464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 237 - 283
Target Start/End: Original strand, 13112047 - 13112093
Alignment:
Q  237 tacaaaaatatatttattgtccataaatatattttcagcacaaaata 283  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||    
T  13112047 tacaaaaatatatttattgtccatgaatatattttcagcataaaata 13112093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 16428676 - 16428638
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatct 54  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16428676 tgttgcctttctaaacccttgtttcagccccctctatct 16428638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 25251533 - 25251607
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||| ||||||||||| |||||||||||||||||||||      ||| |||| ||||||||||| |||||||||||||||    
T  25251533 tgttgtctttctaaacctttgtttcagccccctctatct------caaggtttactctgatacaaagtctatatttatagt 25251607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 18839610 - 18839571
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  18839610 tgttgcctatctaaacccttgtttcagccccctctatctc 18839571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 26613503 - 26613571
Alignment:
Q  24 ttctaaacccttgttt-cagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatag 95  Q
    |||||||||||||||| ||||||||||||||||||    || ||||  |||||||||||||||||||||||||    
T  26613503 ttctaaacccttgttttcagccccctctatctctc----aaggtttcatctgatacaaggtctatatttatag 26613571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 31425277 - 31425316
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  31425277 tgttgcctttctaaacccttgtttcagccccctttatctc 31425316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 49495468 - 49495531
Alignment:
Q  27 taaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||||||||||||||||||||||      ||| |||| ||||||||||| |||||||||||||||    
T  49495468 taaacccttgtttcagccccctctatct------caaggtttactctgatacaaagtctatatttatagt 49495531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 4131637 - 4131678
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctc 57  Q
    ||||||| ||||||| ||||||||||||||||||||||||||    
T  4131637 tgttgccattctaaatccttgtttcagccccctctatctctc 4131678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 11457733 - 11457807
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||| ||||||||||| |||||||||||||||||||||      ||| |||| | ||||||||| |||||||||||||||    
T  11457733 tgttgtctttctaaaccattgtttcagccccctctatct------caaggtttacactgatacaatgtctatatttatagt 11457807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 50079085 - 50079118
Alignment:
Q  22 ctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||||||||||||||||||||    
T  50079085 ctttctaaacccttgtttcagccccctctatctc 50079118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 6115344 - 6115376
Alignment:
Q  23 tttctaaacccttgtttcagccccctctatctc 55  Q
    |||||||||||||||||||||||||||||||||    
T  6115344 tttctaaacccttgtttcagccccctctatctc 6115376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 141
Target Start/End: Complemental strand, 32261014 - 32260950
Alignment:
Q  77 acaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatac 141  Q
    ||||| ||||||||||||| |||||||||||| |||||||| |||| || ||||| |||| ||||    
T  32261014 acaagatctatatttatagagaaatataactcgtaaatttgaaacggatgtcacattgaatatac 32260950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 299 - 346
Target Start/End: Original strand, 11693706 - 11693753
Alignment:
Q  299 ttttatatttttagcaacaatattcttcttccatcaaattttgagtca 346  Q
    ||||||| ||||||||| ||| |||||| |||||||||||||||||||    
T  11693706 ttttataattttagcaataatcttcttcatccatcaaattttgagtca 11693753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 129
Target Start/End: Original strand, 13785580 - 13785611
Alignment:
Q  98 aaatataactcataaatttggaacgaatatca 129  Q
    ||||||||||||||||||||||||||||||||    
T  13785580 aaatataactcataaatttggaacgaatatca 13785611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 31489938 - 31489899
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    |||| ||||||||||||||||||||| |||||||||||||    
T  31489938 tgttacctttctaaacccttgtttcaaccccctctatctc 31489899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 47
Target Start/End: Original strand, 46431965 - 46431996
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccc 47  Q
    ||||||||||||||||||||||||||||||||    
T  46431965 tgttgcctttctaaacccttgtttcagccccc 46431996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 346
Target Start/End: Original strand, 13785786 - 13785835
Alignment:
Q  297 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 346  Q
    ||||| ||||||||||| |||||||||| | |||||||| ||||||||||    
T  13785786 tctttcatatttttagcgacaatattctccatccatcaatttttgagtca 13785835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 23783533 - 23783500
Alignment:
Q  63 aagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||| ||||||||||||||||||||||||    
T  23783533 aagtttgctttgatacaaggtctatatttatagt 23783500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 6756550 - 6756514
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctat 52  Q
    |||||||||||||| |||||||||||| |||||||||    
T  6756550 tgttgcctttctaagcccttgtttcagtcccctctat 6756514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 346
Target Start/End: Complemental strand, 10115506 - 10115466
Alignment:
Q  306 tttttagcaacaatattcttcttccatcaaattttgagtca 346  Q
    ||||| ||||||||||||||  |||||||||||||||||||    
T  10115506 ttttttgcaacaatattcttaatccatcaaattttgagtca 10115466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 100
Target Start/End: Original strand, 13449856 - 13449884
Alignment:
Q  72 ctgatacaaggtctatatttatagtgaaa 100  Q
    |||||||||||||||||||||||||||||    
T  13449856 ctgatacaaggtctatatttatagtgaaa 13449884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 16432428 - 16432396
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccct 48  Q
    ||||||||||||||||||||||||| |||||||    
T  16432428 tgttgcctttctaaacccttgtttctgccccct 16432396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 227; Significance: 1e-125; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 746760 - 746424
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  746760 tgttgcttttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 746661  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  746660 ttggaacaaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 746564  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  746563 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 746464  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  746463 acaatattctccatccatcaaattttgagtcatactacaa 746424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 16 - 380
Target Start/End: Complemental strand, 458287 - 457926
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||  || ||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  458287 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaggtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 458190  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  458189 ttggaacaaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 458092  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  458091 catcaaatcgttcttcatacgatacaaaaatatatttattgtccacaaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 457992  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 380  Q
    |||||||||  | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  457991 acaatattccccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattag 457926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 16 - 354
Target Start/End: Original strand, 4104149 - 4104481
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  4104149 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 4104246  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||| ||||||||   |||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4104247 ttggaacaaataccacactga---tacgttt--tttttttctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 4104341  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||       ||||||||||||||||||    
T  4104342 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcataaagtatatttgaaacaaatcttttatatttttagca 4104441  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  4104442 acaatattcttcttccatcaaattttgagtcatactacaa 4104481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 25533445 - 25533109
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc--aaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |  |||||||   ||||||||||||||||||||||||| ||| ||||||||||||    
T  25533445 tgttgcctttctaaacccttgtttcagccccctctatctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataa 25533346  T
Q  113 atttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatt 212  Q
    |||| |||| |||||||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25533345 atttagaacaaatatcacactgaagatacgttt-----ttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatt 25533251  T
Q  213 tgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttag 312  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       ||||||||||||||||    
T  25533250 tgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcaaaaaatatatttgaaacaaatcttttatatttttag 25533151  T
Q  313 caacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||||| | |||||||||||||||||||||||||||    
T  25533150 caacaatattctccatccatcaaattttgagtcatactacaa 25533109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 455910 - 455575
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||  || ||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  455910 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaggtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 455813  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||| | ||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  455812 ttggaacaaataccgcactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 455715  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  455714 catcaaatcgttcttcatacgatacaaaaatatatttattgtccacaaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 455615  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||  | |||||||||||||||||||||||||||    
T  455614 acaatattccccatccatcaaattttgagtcatactacaa 455575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 16 - 380
Target Start/End: Complemental strand, 42992289 - 42991929
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    |||||||||| ||||||||||||||||||||||||||||||||   |||||||    ||||||||||| |||||||||||| ||| ||||||||||||||    
T  42992289 tgttgcctttttaaacccttgtttcagccccctctatctctctt--aaagtttagcatgatacaaggtatatatttatagtaaaagtataactcataaat 42992192  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||  ||||| |||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42992191 ttggaattaatattacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 42992095  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||        |||||||||||||| ||    
T  42992094 catcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaaccttttatatttttaaca 42991995  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 380  Q
    |||||||||| | ||||||||||||||||||||||||||| |||||  |||||||||| |||||||    
T  42991994 acaatattctccatccatcaaattttgagtcatactacaacattcttcaccttgactctaaattag 42991929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 16 - 354
Target Start/End: Original strand, 10621784 - 10622125
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc------aaagtttgctctgatacaaggtctatatttatagtgaaa-tataactc 108  Q
    |||||| ||||||||||||||||||||| ||||||||||||||| |      |||||||   ||||||||||||||||||||||||| ||| ||||||||    
T  10621784 tgttgcttttctaaacccttgtttcagcaccctctatctctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactc 10621883  T
Q  109 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 208  Q
    ||||||||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10621884 ataaatttggaacaaataccacactgaagatacgttt----tttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 10621979  T
Q  209 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 308  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||       ||||||||||||    
T  10621980 tatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatcttcagcacaatatatatttgaaacaaatcttttatattt 10622079  T
Q  309 ttagcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||||||||| | |||||||||||||||||||||||||||    
T  10622080 ttagcaacaatattctccatccatcaaattttgagtcatactacaa 10622125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 26 - 380
Target Start/End: Original strand, 53915760 - 53916106
Alignment:
Q  26 ctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacgaa 124  Q
    |||||||||||||||||||||||||||||       || |||| ||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  53915760 ctaaacccttgtttcagccccctctatctt------aaggtttactctgattcaaggtctatatttatagtaaaagtataactcataaatttggaacgaa 53915853  T
Q  125 tatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcg 224  Q
    || |||||| |||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  53915854 taccacactcaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcg 53915950  T
Q  225 tccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattct 324  Q
    | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||||||||||||    
T  53915951 ttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattct 53916050  T
Q  325 tcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 380  Q
     | ||| ||||||||||||||||||||||| |||||   ||||||||| |||||||    
T  53916051 ccatccctcaaattttgagtcatactacaacattcttcgccttgactctaaattag 53916106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 51943374 - 51943044
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||||||||||||| |||||||||| |||||||||||       | |||| ||||||| ||||||||||||||||||| ||| ||||| ||||||||    
T  51943374 tgttgcctttctaaacctttgtttcagcaccctctatctcc------aggtttactctgattcaaggtctatatttatagtaaaagtataaatcataaat 51943281  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    |||||||||||| ||||||||||||||||||         |||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  51943280 ttggaacgaataccacactgaagatacgttt---ttctttctccttcaatgaaagaatatttacatcaaaaatataatattccctttcaaaatatatttg 51943184  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  51943183 catcaaatcattcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 51943084  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  51943083 acaatattcttcatccatcaaattttgagtcatactacaa 51943044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 24 - 354
Target Start/End: Complemental strand, 41849147 - 41848806
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatct----ctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttgg 118  Q
    |||||||||||||||||||||||||||||||    ||||| ||||||||   ||||||||| ||||||||||||||| ||| ||||||||||||||||||    
T  41849147 ttctaaacccttgtttcagccccctctatctatctctctctcaaagtttagcctgatacaatgtctatatttatagtaaaagtataactcataaatttgg 41849048  T
Q  119 aacgaatatcacactgaagatacgtttcnnnnnnnn------ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatt 212  Q
    ||| |||| ||||||||||||||||||               ||| |||||| ||||||||||||||| |||||||||||||||| ||||||||||||||    
T  41849047 aacaaataccacactgaagatacgttttttttttttttttttctctttcagttaaagaatatttgcatcaaaaatataatattccttttcaaaatatatt 41848948  T
Q  213 tgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttag 312  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||    
T  41848947 tgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttag 41848848  T
Q  313 caacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||||| | |||||||||||||||||||||||||||    
T  41848847 caacaatattctccatccatcaaattttgagtcatactacaa 41848806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 32 - 354
Target Start/End: Complemental strand, 1313397 - 1313084
Alignment:
Q  32 ccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacgaatatcac 130  Q
    ||||||||||||||||||||||||      || |||| ||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  1313397 ccttgtttcagccccctctatctc------aaggtttactctgattcaaggtctatatttatagtaaaagtataactcataaatttggaacgaatatcac 1313304  T
Q  131 actgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttc 230  Q
    ||| ||||||| |||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1313303 actaaagatactttt----tttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttc 1313208  T
Q  231 atacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttcc 330  Q
    ||||| |||| |||||||||||||||||||||||||||||||| |||||||||| ||||       || ||||||||||||||||||||||||| | |||    
T  1313207 atacggtacagaaatatatttattgtccataaatatattttcaacacaaaatatatttgaaacaaatcatttatatttttagcaacaatattctccatcc 1313108  T
Q  331 atcaaattttgagtcatactacaa 354  Q
    ||||||||||||||||||||||||    
T  1313107 atcaaattttgagtcatactacaa 1313084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 24 - 354
Target Start/End: Original strand, 27635889 - 27636210
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa--tataactcataaatttggaac 121  Q
    ||||||||||||||||||||||||||||||||      || |||| |||| || |||||||||||||| |||| |||  |||||||||||||||||||||    
T  27635889 ttctaaacccttgtttcagccccctctatctc------aaggtttactctaattcaaggtctatatttgtagtaaaaaatataactcataaatttggaac 27635982  T
Q  122 gaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaa 221  Q
    ||||| |||||||||||||| |||         |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  27635983 gaataccacactgaagatacattt-----ttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaa 27636077  T
Q  222 tcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatat 321  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       | |||||||||||||||||||||||    
T  27636078 tcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaactaatattttatatttttagcaacaatat 27636177  T
Q  322 tcttcttccatcaaattttgagtcatactacaa 354  Q
    ||| | ||||||||||||| | |||||||||||    
T  27636178 tctccatccatcaaattttaaatcatactacaa 27636210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 42990307 - 42989954
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttg-----ctc-----------tgatacaaggtctatatttatagtgaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |      |||           |||||||||||||||||||||||| ||    
T  42990307 tgttgcctttctaaacccttgtttcagccccctctatctctctctcaaagtctctctctctcaaagtttagcatgatacaaggtctatatttatagtaaa 42990208  T
Q  100 a-tataactcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccc 198  Q
    | ||||||||||||||||||||| |||| |||||||||||||| |||         |||||||||||||||||||||||||| ||||||||||||||| |    
T  42990207 agtataactcataaatttggaacaaataccacactgaagatacattt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattctc 42990110  T
Q  199 tttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntc 298  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||       |     
T  42990109 tttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatactttcagcaaaaaatatatttgaaacaaatt 42990010  T
Q  299 ttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  42990009 ttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 42989954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 24 - 351
Target Start/End: Original strand, 53917926 - 53918245
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacg 122  Q
    ||||||||| |||||||||||||||| |||||      || ||||  |||||| ||||||||||||||||||| ||| ||||||||||||||||| ||||    
T  53917926 ttctaaaccattgtttcagccccctccatctc------aaggtttaatctgattcaaggtctatatttatagtaaaagtataactcataaatttgaaacg 53918019  T
Q  123 aatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaat 222  Q
    |||| ||||||||||||||||||         |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  53918020 aataccacactgaagatacgttt---ttttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 53918116  T
Q  223 cgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatatt 322  Q
    ||| ||||||||| || ||||||||||||||||||||||||||||| |||| |||||||||| ||||       ||||||||||||||||||||||||||    
T  53918117 cgttcttcatacggtaaaaaaatatatttattgtccataaatatatgttcaacacaaaatatatttgaaacaaatcttttatatttttagcaacaatatt 53918216  T
Q  323 cttcttccatcaaattttgagtcatacta 351  Q
    || | ||||||||||||||||||||||||    
T  53918217 ctccatccatcaaattttgagtcatacta 53918245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 16 - 146
Target Start/End: Complemental strand, 6561813 - 6561689
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaatataactcataaatt 115  Q
    ||||||||||||||||||||||||||||||||||||||||      || |||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  6561813 tgttgcctttctaaacccttgtttcagccccctctatctc------aaggtttactctgatacaaggtctatatttatagagaaatataactcataaatt 6561720  T
Q  116 tggaacgaatatcacactgaagatacgtttc 146  Q
    |||||||||||||||||||||||||||||||    
T  6561719 tggaacgaatatcacactgaagatacgtttc 6561689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 4308535 - 4308613
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||||||    
T  4308535 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatatttatagtgaaa 4308613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 27101435 - 27101517
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||| || |||  |||||||||||||||||||||||||||||||||||    
T  27101435 tgttgcctttctaaacccttgtttcagcctcctctatctctatctcaa--tttgctctgatacaaggtctatatttatagtgaaa 27101517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 9604861 - 9604944
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||| || ||||| |||| ||||||||||||||||||||||||||    
T  9604861 tgttgcctttctaaacc-ttgtttcagccccctctatctctctctcagagttttctctaatacaaggtctatatttatagtgaaa 9604944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 6063700 - 6063776
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||||    ||||||||||| ||||||||||||||||||||||||    
T  6063700 tgttgcctttctaaacccttgtttcagccccctctatctct----caaagtttgctttgatacaaggtctatatttatagt 6063776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 10084645 - 10084721
Alignment:
Q  18 ttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||||||||||||||| |||||||||||||||||||  |||||||||||| |||||||||||||||||||||||    
T  10084645 ttgcctttctaaacccttgttccagccccctctatctctct--caaagtttgctccgatacaaggtctatatttatagt 10084721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 11170407 - 11170333
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||    
T  11170407 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatatttatagt 11170333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 51727260 - 51727338
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    ||||||||||||||||||||||||||||||||| ||||||      |||||||||||||||||||||||||||||||||||||||    
T  51727260 tgttgcctttctaaacccttgtttcagccccctttatctc------aaagtttgctctgatacaaggtctatatttatagtgaaa 51727338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 10191565 - 10191641
Alignment:
Q  18 ttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||||||||||||||| ||||||||| ||||||||||  ||||||||||| |||||||||||||||||||||||    
T  10191565 ttgcctttctaaacccttgttccagccccctttatctctctc--aaagtttgctccgatacaaggtctatatttatagt 10191641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 38890043 - 38889968
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||   ||||||||||||||||||||||    
T  38890043 tgttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttgct---atacaaggtctatatttatagt 38889968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 11163153 - 11163082
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttat 93  Q
    |||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||||||||||||||    
T  11163153 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatatttat 11163082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 3859531 - 3859457
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      | ||||||||||||||||||||||||||||||||||    
T  3859531 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggtctatatttatagt 3859457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 5522869 - 5522943
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      | ||||||||||||||||||||||||||||||||||    
T  5522869 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggtctatatttatagt 5522943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 35918203 - 35918281
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||      |||| |||||| ||||||||||||||||||||||||||||    
T  35918203 tgttgcctttctaaacccttgtttcagccccctctatct------caaaatttgctatgatacaaggtctatatttatagtgaaa 35918281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 43226089 - 43226011
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||      | |||||||||||||||||| |||||||||||||||||||    
T  43226089 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaatgtctatatttatagtgaaa 43226011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 50494002 - 50493924
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    |||||| |||||||||||||||||||||||||||||||||||      |||||||| ||||||||||||||||||||||||||||    
T  50494002 tgttgcttttctaaacccttgtttcagccccctctatctctc------agtttgctttgatacaaggtctatatttatagtgaaa 50493924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 190 - 273
Target Start/End: Complemental strand, 11066429 - 11066346
Alignment:
Q  190 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttca 273  Q
    ||||||| |||| ||||||||||||||||||||  ||||||||| | || ||||||||||||||||||||||||| ||||||||    
T  11066429 aatattctctttaaaaatatatttgcatcaaatattccttcatatggtaaaaaaatatatttattgtccataaatgtattttca 11066346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 1321441 - 1321370
Alignment:
Q  19 tgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||||||||||||||||||||||||||||||      |||||||||||||||||||| |||||||||||||||    
T  1321441 tgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaagtctatatttatagt 1321370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 297 - 354
Target Start/End: Complemental strand, 6561672 - 6561615
Alignment:
Q  297 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  6561672 tcttttatatttttagcaacaatattcttcatccatcaaatttcgagtcatactacaa 6561615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 24979710 - 24979632
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    ||||| |||||||||||||||||||||||||||||||||      |||||||| |||||||||||||| ||||||||||||||||    
T  24979710 tgttgtctttctaaacccttgtttcagccccctctatct------caaagtttactctgatacaaggtatatatttatagtgaaa 24979632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 26720551 - 26720477
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||| ||||||||||||||||||      | ||||||||||||||||||||||||||||||||||    
T  26720551 tgttgcctttctaaacccttatttcagccccctctatct------ccaagtttgctctgatacaaggtctatatttatagt 26720477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 43228294 - 43228216
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    |||||||||||||||| ||||||||||||||||||||||      | |||||||||||||||||| |||||||||||||||||||    
T  43228294 tgttgcctttctaaactcttgtttcagccccctctatct------ccaagtttgctctgatacaatgtctatatttatagtgaaa 43228216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 6066050 - 6066125
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||||||||||||||||||||||||||     |||| || ||||||||||| ||||||||||||||||||||||||    
T  6066050 tgttgcctttctaaacccttgtttcagccccc-----ctctatctcaaagtttgctttgatacaaggtctatatttatagt 6066125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 273
Target Start/End: Original strand, 54287487 - 54287559
Alignment:
Q  201 tcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttca 273  Q
    ||||||||||||||||||||||  ||||||||||  ||||||||| |||||||| ||||||||||||||||||    
T  54287487 tcaaaatatatttgcatcaaatattccttcatacagtacaaaaatgtatttattatccataaatatattttca 54287559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 145
Target Start/End: Complemental strand, 11072900 - 11072825
Alignment:
Q  70 ctctgatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgttt 145  Q
    |||||||||||| ||| ||||||||| ||||||||||||| |||||||||||| ||||||| ||||||||| ||||    
T  11072900 ctctgatacaagatctttatttatagagaaatataactcacaaatttggaacggatatcacgctgaagatatgttt 11072825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 22114561 - 22114633
Alignment:
Q  18 ttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||||||||||||||||||||||| |||||||      | ||||||||||||||||||||||||||||||||||    
T  22114561 ttgcctttctaaacccttgtttcagccccttctatct------ccaagtttgctctgatacaaggtctatatttatagt 22114633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 18099424 - 18099493
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 90  Q
    ||||||| ||||||||||||||||||||||||||||||||||     |||||| |||||||||||||||||||||    
T  18099424 tgttgccattctaaacccttgtttcagccccctctatctctc-----aagtttactctgatacaaggtctatatt 18099493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 206 - 271
Target Start/End: Original strand, 53974011 - 53974077
Alignment:
Q  206 atatatttgcatcaaatcgtcctt-catacgatacaaaaatatatttattgtccataaatatatttt 271  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||||||||||| |||||||||||||    
T  53974011 atatatttgcatcaaatcttcctttcatacggtacaaaaatatatttattgtctataaatatatttt 53974077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 5191656 - 5191582
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      | |||||||||  |||||||||||||||||||||||    
T  5191656 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgcttagatacaaggtctatatttatagt 5191582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 96
Target Start/End: Original strand, 6719357 - 6719439
Alignment:
Q  22 ctttctaaacccttgtttcagccccctctatctctctcgc--------aaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||| ||||||||||||||||||||||| |        |||||||||||||||||||||||||||||||||||    
T  6719357 ctttctaaacccttatttcagccccctctatctctctctctctctctcaaagtttgctctgatacaaggtctatatttatagt 6719439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 15780863 - 15780789
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||| |||||||||||||||||||||||||||||||      | |||||| |||||||||||||||||||||||||||    
T  15780863 tgttgccattctaaacccttgtttcagccccctctatct------ccaagtttactctgatacaaggtctatatttatagt 15780789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 35777424 - 35777350
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||| ||||||||||||||||||||||||||||||||      ||||||||||| |||||||| |||||||||||||||    
T  35777424 tgttgcttttctaaacccttgtttcagccccctctatct------caaagtttgctttgatacaatgtctatatttatagt 35777350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 45882942 - 45882868
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      || ||||| || ||||||||||||||||||||||||    
T  45882942 tgttgcctttctaaacccttgtttcagccccctctatct------catagtttactatgatacaaggtctatatttatagt 45882868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 18097154 - 18097229
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||| |||||||||||||||| |||||||||||||||||     |||||| || ||||||||||||||||||||||||    
T  18097154 tgttgccattctaaacccttgtttgagccccctctatctctc-----aagtttactatgatacaaggtctatatttatagt 18097229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 30005844 - 30005801
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctc 59  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  30005844 tgttgcctttctaaacccttgtttcagccccctctatctctctc 30005801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 276
Target Start/End: Complemental strand, 11072801 - 11072731
Alignment:
Q  206 atatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 276  Q
    |||||||||||||||||| ||| | ||||| ||||||||| ||||| |||||||||||| |||||||||||    
T  11072801 atatatttgcatcaaatcttccgtaatacggtacaaaaatctatttgttgtccataaatgtattttcagca 11072731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 47149149 - 47149228
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgc-tctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||| ||  ||| |  | | ||||||||||||||||||||||||||    
T  47149149 tgttgcctttctaaacccttgtttcagccccctctatctccct--caaggcctacatctgatacaaggtctatatttatagt 47149228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 1626937 - 1627011
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      ||| |||| | ||||||||| |||||||||||||||    
T  1626937 tgttgcctttctaaacccttgtttcagccccctctatct------caaggtttacactgatacaatgtctatatttatagt 1627011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 10958577 - 10958651
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||| ||||||||||||||||||||||||||||||| |      | |||| |||||||||||||||||||||||||||    
T  10958577 tgttgccattctaaacccttgtttcagccccctctatcttt------atgtttactctgatacaaggtctatatttatagt 10958651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 32219098 - 32219020
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    |||||||||||| ||||||||||||||||||||||||||      ||||||||  || ||||||||||||||||||||| |||||    
T  32219098 tgttgcctttctgaacccttgtttcagccccctctatct------caaagtttagtcagatacaaggtctatatttatactgaaa 32219020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 10956281 - 10956355
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||| ||||||||||||||||||||||||||||||| ||     | |||| |||||||||||||||||||||||||||    
T  10956281 tgttgccattctaaacccttgtttcagccccctctatct-tc-----atgtttactctgatacaaggtctatatttatagt 10956355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 27101540 - 27101592
Alignment:
Q  46 cctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    |||||||||||||| |||  |||||||||||||||||||||||||||||||||||    
T  27101540 cctctatctctctctcaa--tttgctctgatacaaggtctatatttatagtgaaa 27101592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 28102256 - 28102295
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28102256 tgttgcctttctaaacccttgtttcagccccctctatctc 28102295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 28137549 - 28137588
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28137549 tgttgcctttctaaacccttgtttcagccccctctatctc 28137588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 38210373 - 38210330
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctc 59  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  38210373 tgttgcttttctaaacccttgtttcagccccctctatctctctc 38210330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 25690651 - 25690688
Alignment:
Q  63 aagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25690651 aagtttgctctgatacaaggtctatatttatagtgaaa 25690688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 29956642 - 29956589
Alignment:
Q  47 ctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    |||| |||||||| ||||||||||||| |||||| |||||||||||||||||||    
T  29956642 ctctctctctctctcaaagtttgctctaatacaaagtctatatttatagtgaaa 29956589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 30005797 - 30005744
Alignment:
Q  47 ctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    |||| |||||||| ||||||||||||| |||||| |||||||||||||||||||    
T  30005797 ctctctctctctctcaaagtttgctctaatacaaagtctatatttatagtgaaa 30005744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 32264293 - 32264371
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||| |||||||||||||||      ||  ||| |||||||||||||||||||||||||||    
T  32264293 tgttgcctttctaaacccttgtttgagccccctctatctcaaagttaa--tttactctgatacaaggtctatatttatagt 32264371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 47701849 - 47701923
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||||||||||||||||||||||||||| |||||      ||| |||| | ||||||||| |||||||||||||||    
T  47701849 tgttgcctttctaaacccttgtttcagccccctttatct------caaggtttacactgatacaatgtctatatttatagt 47701923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 346
Target Start/End: Original strand, 53974148 - 53974197
Alignment:
Q  297 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 346  Q
    ||||||||||||||| |||||| ||||||| |||||||||||||||||||    
T  53974148 tcttttatatttttaacaacaacattcttcatccatcaaattttgagtca 53974197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 29956682 - 29956646
Alignment:
Q  23 tttctaaacccttgtttcagccccctctatctctctc 59  Q
    |||||||||||||||||||||||||||||||||||||    
T  29956682 tttctaaacccttgtttcagccccctctatctctctc 29956646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 28100295 - 28100334
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  28100295 tgttgcttttctaaacccttgtttcagccccctctatctc 28100334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 43423717 - 43423756
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  43423717 tgttgcctttctaaacccttgtttcagccccctctttctc 43423756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 51675009 - 51675048
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  51675009 tgttgtctttctaaacccttgtttcagccccctctatctc 51675048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 100
Target Start/End: Original strand, 53896489 - 53896528
Alignment:
Q  61 caaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  53896489 caaagtttgctttgatacaaggtctatatttatagtgaaa 53896528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 145
Target Start/End: Complemental strand, 11066543 - 11066469
Alignment:
Q  71 tctgatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgttt 145  Q
    ||||||||||| | | ||||||||| |||| | |||||| |||||||||||| ||||||| ||||||||| ||||    
T  11066543 tctgatacaagatttgtatttatagagaaagagaactcacaaatttggaacggatatcacgctgaagatatgttt 11066469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 346
Target Start/End: Complemental strand, 11072690 - 11072644
Alignment:
Q  300 tttatatttttagcaacaatattcttcttccatcaaattttgagtca 346  Q
    ||||||||||| |||||||| |||||| |||||||||||||||||||    
T  11072690 tttatattttttgcaacaatcttcttcatccatcaaattttgagtca 11072644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 28761682 - 28761756
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||| |||||||||||||||||||| ||||||||||||      ||| |||| ||||||| ||| |||||||||||||||    
T  28761682 tgttgtctttctaaacccttgtttcaaccccctctatct------caaggtttactctgatgcaaagtctatatttatagt 28761756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 43421669 - 43421743
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||| |||| |||||||      ||| |||| | ||||||||| |||||||||||||||    
T  43421669 tgttgcctttctaaacccttgtttcaaccccttctatct------caaggtttacactgatacaatgtctatatttatagt 43421743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 1618916 - 1619012
Alignment:
Q  23 tttctaaacccttgttt-cagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaa 120  Q
    ||||||||||||||||| ||||||||||| ||||||    || |||| || || ||||||||||||||||||||| ||| |||  |||||||| ||||||    
T  1618916 tttctaaacccttgttttcagccccctctgtctctc----aaggtttactatggtacaaggtctatatttatagtcaaagtatccctcataaaattggaa 1619011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 3314687 - 3314648
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  3314687 tgttacctttctaaacccttatttcagccccctctatctc 3314648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 276
Target Start/End: Original strand, 5535882 - 5535929
Alignment:
Q  229 tcatacgatacaaaaatatatttattgtccataaatatattttcagca 276  Q
    |||||||||||||| |||| |||  |||||||||||||||||||||||    
T  5535882 tcatacgatacaaatatatcttttctgtccataaatatattttcagca 5535929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 5927018 - 5927057
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  5927018 tgttgcatttctaaacccttgtttcagccctctctatctc 5927057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 6231452 - 6231413
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  6231452 tgttgcctttctaaatccttgtttcagcccgctctatctc 6231413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 3306795 - 3306728
Alignment:
Q  23 tttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||| |||||||      | |||| | ||||||||| |||||||||||||||    
T  3306795 tttctaaacccttgtttcagccccctatatctct------aggtttacactgatacaatgtctatatttatagt 3306728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 53468709 - 53468747
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatct 54  Q
    ||||||| ||||||||||||||||||||||||| |||||    
T  53468709 tgttgccattctaaacccttgtttcagccccctttatct 53468747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 53973898 - 53973936
Alignment:
Q  78 caaggtctatatttatagtgaaatataactcataaattt 116  Q
    |||| ||||||||||||| ||||||||||||||||||||    
T  53973898 caagatctatatttatagagaaatataactcataaattt 53973936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 53597201 - 53597144
Alignment:
Q  65 gtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaac 121  Q
    |||| ||||||||||||||||||||||||||| ||| |||  |||||||| |||||||    
T  53597201 gtttactctgatacaaggtctatatttatagtaaaagtatccctcataaaattggaac 53597144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 224; Significance: 1e-123; HSPs: 87)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 16 - 378
Target Start/End: Original strand, 22132646 - 22133009
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccc---tctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcata 111  Q
    |||||||||||||||||||||||||||||||    ||| |||||||| ||||||||   ||||||||||||||||||||||||| ||| |||||||||||    
T  22132646 tgttgcctttctaaacccttgtttcagcccctctatctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcata 22132745  T
Q  112 aatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatat 211  Q
    |||||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22132746 aatttggaacaaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 22132842  T
Q  212 ttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattttta 311  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||||||    
T  22132843 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttta 22132942  T
Q  312 gcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaatt 378  Q
    ||||||||||||| | ||||||||||||||| ||||||||||| |||||| ||||||||||||||||    
T  22132943 gcaacaatattctccatccatcaaattttgaatcatactacaacattctccaccttgactccaaatt 22133009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 16 - 380
Target Start/End: Original strand, 14787687 - 14788045
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||| ||||||||||||||||||||||||||||||||||    |||||||  | |||||||||||||||||||||||| ||| ||||||||||||||    
T  14787687 tgttgccattctaaacccttgtttcagccccctctatctctc----aaagtttagtatgatacaaggtctatatttatagtaaaagtataactcataaat 14787782  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    |||||||||||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14787783 ttggaacgaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 14787879  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||       ||||||||||||||||||    
T  14787880 catcaaatcgttctttatacggtacaaaaatatatttattgtccataaatatattttcaccacaaaatatatttgaaacaaatcttttatatttttagca 14787979  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 380  Q
    ||| |||||| | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  14787980 acattattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattag 14788045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 16 - 354
Target Start/End: Original strand, 17662490 - 17662824
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  17662490 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttgctctgatacaaggtctatatttatagtaaaagtataactcataaat 17662587  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||| |||||||||||||| |||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17662588 ttggaacaaataccacactgaagatactttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 17662684  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||        ||||||||||||||||||    
T  17662685 catcaaatcgttcttcgtacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttaaaacaaatcttttatatttttagca 17662784  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||| | ||||||||||||  |||||||||||||    
T  17662785 acaatattctccatccatcaaatttgtagtcatactacaa 17662824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 24348295 - 24347961
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagttt-gctctgatacaaggtctatatttatagtgaaa-tataactcataaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||||||||||||||||||||| ||| |||||||||||||    
T  24348295 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagct-tgatacaaggtctatatttatagtaaaagtataactcataaa 24348199  T
Q  114 tttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatattt 213  Q
    |||||||| |||| |||| ||||||||| |||         |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24348198 tttggaacaaataccacattgaagatactttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatattt 24348101  T
Q  214 gcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagc 313  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||       |||||||||||||||||    
T  24348100 gcatcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttc-gcacaaaatatatttgaaacaaatcttttatatttttagc 24348002  T
Q  314 aacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    ||||||||||| | |||||||||||||||||||||||||||    
T  24348001 aacaatattctccatccatcaaattttgagtcatactacaa 24347961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 16 - 354
Target Start/End: Original strand, 22134871 - 22135217
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagcccc---------ctctatctctctcgcaaagttt-gctctgatacaaggtctatatttatagtgaaa-tata 104  Q
    |||||||||||||||||||||||||||||||         |||| |||||||| |||||||| ||| |||||||||||||||||||||||| ||| ||||    
T  22134871 tgttgcctttctaaacccttgtttcagcccctctatctctctctctctctctctcaaagtttagct-tgatacaaggtctatatttatagtaaaagtata 22134969  T
Q  105 actcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaa 204  Q
    ||||||||||||||||| |||| ||||||||||||||||||         ||||||||||||||||||||||| || |||||||||||||||||||||||    
T  22134970 actcataaatttggaacaaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgaatcaaaaatataatattccctttcaa 22135067  T
Q  205 aatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttat 304  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||    
T  22135068 aatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttat 22135167  T
Q  305 atttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||    
T  22135168 atttttagcaacaatattctccatccatcaaattttgagtcatactacaa 22135217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 16 - 354
Target Start/End: Original strand, 44600094 - 44600426
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    |||||| |||||||||||||||||||||||||||||||||      |||||||||| | |||||||||||||||||||||| ||| ||||||||||||||    
T  44600094 tgttgcttttctaaacccttgtttcagccccctctatctc------aaagtttgctttaatacaaggtctatatttatagtaaaagtataactcataaat 44600187  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||| ||| |||| |||||||||||| |||||         |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  44600188 ttgaaacaaataccacactgaagattcgttt-tttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattcccttttaaaatatatttg 44600286  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||       ||||||||||||||||||    
T  44600287 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagca 44600386  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||| | |||||||| ||||||||||||||||||    
T  44600387 acaatattctccatccatcaatttttgagtcatactacaa 44600426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 24 - 380
Target Start/End: Complemental strand, 5101066 - 5100719
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacg 122  Q
    ||||||||| ||||||||| ||||||||||||      || |||| | ||||| ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  5101066 ttctaaacctttgtttcagtcccctctatctc------aaggtttaccctgattcaaggtctatatttatagtaaaagtataactcataaatttggaacg 5100973  T
Q  123 aatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaat 222  Q
    |||| || | |||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  5100972 aataccagattgaagatacgttt----tttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 5100877  T
Q  223 cgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatatt 322  Q
    ||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||        ||||||||||||||||||||||||||    
T  5100876 cgttcttcatacggtacaaaaatatatttgttgtccataaatatattttcagcacaaaatatatttaaaacaaatcttttatatttttagcaacaatatt 5100777  T
Q  323 cttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 380  Q
    || | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  5100776 ctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattag 5100719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 24 - 354
Target Start/End: Complemental strand, 56030513 - 56030191
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacg 122  Q
    ||||||||||||||||||||||| ||||||||      || |||| ||||||||||| | ||||||||||||| ||| |||||||||||||||||||| |    
T  56030513 ttctaaacccttgtttcagccccttctatctc------aaggtttactctgatacaaagcctatatttatagtaaaaatataactcataaatttggaaag 56030420  T
Q  123 aatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaat 222  Q
    |||| ||||| |||||||| |||         |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  56030419 aataccacaccgaagatactttt---ttttttctccttcagtgaaagaatatttgcaccaaaaatataatattccctttcaaaatatatttgcatcaaat 56030323  T
Q  223 cgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatatt 322  Q
    ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||||||||||    
T  56030322 cgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatatt 56030223  T
Q  323 cttcttccatcaaattttgagtcatactacaa 354  Q
    || | |||||||||||||||||||||||||||    
T  56030222 ctccatccatcaaattttgagtcatactacaa 56030191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 73 - 340
Target Start/End: Complemental strand, 30136596 - 30136331
Alignment:
Q  73 tgatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaat 172  Q
    |||||| |||| ||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||         |||||||| |||||||||    
T  30136596 tgatactaggtatatatttatagagaaatataactaataaatttagaacgaatatcacactgaagatacgttt--tttttttctccttcaatgaaagaat 30136499  T
Q  173 atttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttc 272  Q
    ||||| || ||||||||||||||| |||| ||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||    
T  30136498 atttgaatcaaaaatataatattctcttttaaaatatatttgcatcaaatcgttcttcatacagtacaaaaatatatttattgtccataaatatattttc 30136399  T
Q  273 agcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaatttt 340  Q
    ||||||| |||| ||||       |||||||||||||||||||||||||||| | | |||||||||||    
T  30136398 agcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccattcatcaaatttt 30136331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 24 - 249
Target Start/End: Complemental strand, 19322766 - 19322547
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaatataactcataaatttggaacga 123  Q
    |||||||||||||||||| |||||||||||||      || |||| |||||||||||| |||||||||||||   |||||||||||||||||||||| ||    
T  19322766 ttctaaacccttgtttcatccccctctatctc------aaggtttactctgatacaagatctatatttatagatgaatataactcataaatttggaatga 19322673  T
Q  124 atatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatc 223  Q
    |||||||| ||||||||| ||||        |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19322672 atatcacattgaagatacatttcttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatc 19322573  T
Q  224 gtccttcatacgatacaaaaatatat 249  Q
    |||||| ||||  |||||||||||||    
T  19322572 gtcctttatacagtacaaaaatatat 19322547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 16 - 225
Target Start/End: Complemental strand, 53405207 - 53405001
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||||||||||||||||||||||||||| ||||||||||||  |||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  53405207 tgttgcctttctaaacccttgtttcagcccc-tctatctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 53405111  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||| ||||||||| ||||||||         |||||| ||||||||||||||||||| ||||||||||| || ||||||||||||||||||    
T  53405110 ttggaacaaataccacactgaaaatacgttt-ttttttttctcctttagtgaaagaatatttgcatcaaaaatataatttttcctttcaaaatatatttg 53405012  T
Q  215 catcaaatcgt 225  Q
    |||||||||||    
T  53405011 catcaaatcgt 53405001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 206 - 354
Target Start/End: Original strand, 47211158 - 47211306
Alignment:
Q  206 atatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttata 305  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||       |||||||||    
T  47211158 atatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttgagcacaaaatatatttgaaacaaatcttttata 47211257  T
Q  306 tttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    ||||||||||||||||||| | ||||||||||||| |||||||||||||    
T  47211258 tttttagcaacaatattctccatccatcaaattttaagtcatactacaa 47211306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 71 - 354
Target Start/End: Complemental strand, 10112899 - 10112628
Alignment:
Q  71 tctgatacaaggtctatatttatagtgaaa--tataactcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaa 168  Q
    |||||||||| |||||||||||||   |||  |||||||||||||||||||||| || |||| |||||||||| |||         |||||| |||||||    
T  10112899 tctgatacaatgtctatatttataaaaaaaaatataactcataaatttggaacggatttcacgctgaagatacattt--tttttttctcctttagtgaaa 10112802  T
Q  169 gaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatat 268  Q
     ||||||||||| |||       ||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||     
T  10112801 taatatttgcatcaaa-------tattctctttcaaa-tatatttacatcaaatcttccttcatacgatacaaaaatatatttattgtccataaatatag 10112710  T
Q  269 tttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||||||||| ||||        ||||||||||||||||||||||||||||| | || |||||||| |||||||||||||    
T  10112709 tttcagcacaaaatatatttgaaac----cttttatatttttagcaacaatattcttcattcaacaaattttaagtcatactacaa 10112628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 115 - 354
Target Start/End: Original strand, 38890478 - 38890699
Alignment:
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatatt-ccctttcaaaatatattt 213  Q
    ||||||||||||||||| ||||||||| ||||        |||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  38890478 ttggaacgaatatcacattgaagatacatttcttttttt-ctcctttagtgaaagaatatttgcatcaaaaatataatatttccctttcaaaatatattt 38890576  T
Q  214 gcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagc 313  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |  |||||                |||||||||||||||||    
T  38890577 gcatcaaatcgtccttcatacaatacaaaaatatatttattgtccataaatatatttgaa--acaaa----------------tcttttatatttttagc 38890658  T
Q  314 aacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    ||||||||||| | |||||||||||||||||||| ||||||    
T  38890659 aacaatattctccatccatcaaattttgagtcatgctacaa 38890699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 47210996 - 47211160
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  47210996 tgttgcctttctaaacccttgtttcagccccctctatctccctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 47211095  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcata 181  Q
    ||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||||    
T  47211096 ttggaacaaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcata 47211160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 71 - 354
Target Start/End: Complemental strand, 9022335 - 9022062
Alignment:
Q  71 tctgatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaaga 170  Q
    ||||||||||||| ||||||||||| |||||||||| ||||||||||||| | |||||||  ||||||||| |||          ||||| |||||||||    
T  9022335 tctgatacaaggtttatatttatagagaaatataacacataaatttggaatggatatcacgttgaagatacatttttttttat--tcctttagtgaaaga 9022238  T
Q  171 atatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattt 270  Q
    |||||||||| |||       |||||||||| ||||||||||||||||||||| | ||||||||| || ||||||||||||||||| |||||||||||||    
T  9022237 atatttgcatcaaa-------tattcccttttaaaatatatttgcatcaaatctttcttcatacggtagaaaaatatatttattgt-cataaatatattt 9022146  T
Q  271 tcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||| ||||||| ||||       || |||||||||| | ||||||||||  || ||||| ||||||||| |||||||||||    
T  9022145 tcagcaaaaaatatatttgaaacaaatcatttatattttcaacaacaatatttctcatccataaaattttgaatcatactacaa 9022062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 18709419 - 18709551
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctcta--tctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataa 112  Q
    ||||||||||||||||||||||||||||||||||||  |||||||| ||||||||   || |||||||||||||||||||||| ||| ||||||||||||    
T  18709419 tgttgcctttctaaacccttgtttcagccccctctatctctctctctcaaagtttagcctaatacaaggtctatatttatagtaaaagtataactcataa 18709518  T
Q  113 atttggaacgaatatcacactgaagatacgttt 145  Q
    ||||||||| |||| ||||||||||||||||||    
T  18709519 atttggaacaaataccacactgaagatacgttt 18709551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 202 - 354
Target Start/End: Complemental strand, 9863650 - 9863501
Alignment:
Q  202 caaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttt 301  Q
    |||||||||||||||||||||| |||||||| |   ||||||||||||||||||| |||||||||||||| |||||||||||| ||||       || ||    
T  9863650 caaaatatatttgcatcaaatcttccttcatgc---acaaaaatatatttattgttcataaatatatttttagcacaaaatatgtttgaaacaaatcatt 9863554  T
Q  302 tatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    ||||||||||| ||||||||  ||| |||| |||||||||||||||| |||||    
T  9863553 tatatttttagtaacaatatatttcatccaacaaattttgagtcatattacaa 9863501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 8631675 - 8631757
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||| |||||||||||||||||||    
T  8631675 tgttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttgctttgatacaaagtctatatttatagtgaaa 8631757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 38409282 - 38409202
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||| |||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  38409282 tgttgcctttttaaaccattgtttcagccccctctatctccctctcaaagtttgctctgatacaaggtctatatttatagt 38409202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 73 - 276
Target Start/End: Original strand, 54928982 - 54929180
Alignment:
Q  73 tgatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnc-tccttcagtgaaaga- 170  Q
    ||||||||||| |||| |||||| |||||||||||| |||||||| |||||||||||| |||||||| ||||||        | || |||||   || |     
T  54928982 tgatacaaggtttatagttatagagaaatataactcgtaaatttgaaacgaatatcacgctgaagatgcgtttcctttttttcctcattcagcataaaat 54929081  T
Q  171 atatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattt 270  Q
    |||||||||| |||       ||||||  || ||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  54929082 atatttgcatcaaa-------tattcctattaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatattttttgtccataaatatattt 54929174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 5637721 - 5637799
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||    
T  5637721 tgttgcctttctaaactcttgtttcagccccctctatctctct--caaagtttgctcttatacaaggtctatatttatagt 5637799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 5198497 - 5198423
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||    
T  5198497 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatatttatagt 5198423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 6764916 - 6764838
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    ||||||||||||||||||||||||||||||| ||||||||      |||||||||||||||||||||||||||||||||||||||    
T  6764916 tgttgcctttctaaacccttgtttcagccccttctatctc------aaagtttgctctgatacaaggtctatatttatagtgaaa 6764838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 24888873 - 24888799
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||    
T  24888873 tgttgcctttctaaacccttgtttcagccccctctatctct------aagtttgctctgatacaaggtctatatttatagt 24888799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 40637151 - 40637073
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||      | ||||||||||||||||||||||||||||||||||||||    
T  40637151 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggtctatatttatagtgaaa 40637073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 7941398 - 7941322
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||||| ||    |||||||||||||||| |||||||||||||||    
T  7941398 tgttgcctttctaaacccttgtttcagccccctctatctctcccg----gtttgctctgatacaacgtctatatttatagt 7941322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 9148330 - 9148254
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||||||||||||||| |||||||||||||||||||    |||||||||||||||||||||| |||||||||||||    
T  9148330 tgttgcctttctaaacccttgcttcagccccctctatctct----caaagtttgctctgatacaaggcctatatttatagt 9148254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 10979755 - 10979676
Alignment:
Q  197 cctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 276  Q
    ||||| ||||||||||||||||||||| ||||||||||   |||||||||||||| ||||||||||||||||||||||||    
T  10979755 cctttaaaaatatatttgcatcaaatcttccttcatacagcacaaaaatatatttgttgtccataaatatattttcagca 10979676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 11006493 - 11006571
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||   |  ||||||||||||||||||||||||||    
T  11006493 tgttgcctttctaaacccttgtttcagccccctctatctctctctcaaa--atagtctgatacaaggtctatatttatagt 11006571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 11435032 - 11434958
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      | ||||||||||||||||||||||||||||||||||    
T  11435032 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggtctatatttatagt 11434958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 11008822 - 11008900
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||  | || |||||||||||||||||||||||||    
T  11008822 tgttgcctttctaaacccttgtttcagccccctctatctctctctcaaa-atagc-ctgatacaaggtctatatttatagt 11008900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 36919841 - 36919917
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||||||||||||||||||||||||||| ||||| |    |||||||| |||||||||||||||||||||||||||    
T  36919841 tgttgcctttctaaacccttgtttcagccccctatatctat----caaagtttactctgatacaaggtctatatttatagt 36919917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 37089627 - 37089704
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||| ||||||||||||||||||||||||||||||||||||   ||||||   |||||||||||||||||||||||||    
T  37089627 tgttgccattctaaacccttgtttcagccccctctatctctctc---aagtttagcctgatacaaggtctatatttatagt 37089704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 297 - 354
Target Start/End: Original strand, 14789512 - 14789569
Alignment:
Q  297 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  14789512 tcttttatatttttagcaacattattcttcatccatcaaattttgagtcatactacaa 14789569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 22044646 - 22044720
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      | |||||||||||||||||||| |||||||||||||    
T  22044646 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggcctatatttatagt 22044720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 22802990 - 22803064
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||| |||||||||||||||||||||||||||||||      |||||||| |||||||||||||||||||||||||||    
T  22802990 tgttgccattctaaacccttgtttcagccccctctatct------caaagtttactctgatacaaggtctatatttatagt 22803064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 47274804 - 47274730
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||  ||||||||||||||||||||||||||    
T  47274804 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttagtctgatacaaggtctatatttatagt 47274730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 47868478 - 47868400
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    |||||||||||||||||||| ||||||||| |||||||||       ||||||||||||||||||||||||||||||||||||||    
T  47868478 tgttgcctttctaaacccttctttcagccctctctatctcc------aagtttgctctgatacaaggtctatatttatagtgaaa 47868400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 48486396 - 48486322
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||| |||||||||||||||||||||||||||||||      |||||||| |||||||||||||||||||||||||||    
T  48486396 tgttgccattctaaacccttgtttcagccccctctatct------caaagtttactctgatacaaggtctatatttatagt 48486322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 51015323 - 51015249
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      | |||||||||||||||||| |||||||||||||||    
T  51015323 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaagtctatatttatagt 51015249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 2485128 - 2485207
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    |||||||||||||||||||||||| ||||||||     |||  | ||||||||||||||||||||||||||||||||||||||||    
T  2485128 tgttgcctttctaaacccttgttttagccccct-----tctagctcaaagtttgctctgatacaaggtctatatttatagtgaaa 2485207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 619703 - 619777
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||| |||| ||||||||||||||||||||||||||||      |||||||| |||||||||||||||||||||||||||    
T  619703 tgttgtctttataaacccttgtttcagccccctctatct------caaagtttactctgatacaaggtctatatttatagt 619777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 9174402 - 9174476
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||| ||||||||||||||||||||||||||||||||      | ||||||||| ||||||||||||||||||||||||    
T  9174402 tgttgcttttctaaacccttgtttcagccccctctatct------ccaagtttgctttgatacaaggtctatatttatagt 9174476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 9176730 - 9176804
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||| ||||||||||||||||||||||||||||||||      | ||||||||| ||||||||||||||||||||||||    
T  9176730 tgttgcttttctaaacccttgtttcagccccctctatct------ccaagtttgctttgatacaaggtctatatttatagt 9176804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 16934399 - 16934473
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||| ||||||||||||||| ||||||||||||||||      ||||||||||| ||||||||||||||||||||||||    
T  16934399 tgttgcttttctaaacccttgtatcagccccctctatct------caaagtttgctttgatacaaggtctatatttatagt 16934473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 18847230 - 18847156
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||| ||||||||||||      ||||||||| | ||||||||||||||||||||||||    
T  18847230 tgttgcctttctaaacccttgtttcaaccccctctatct------caaagtttgttttgatacaaggtctatatttatagt 18847156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 22046941 - 22047015
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      | |||||||||| ||||||||| |||||||||||||    
T  22046941 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctccgatacaaggcctatatttatagt 22047015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 22801126 - 22801192
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||      |||||||| |||||||||||||||||||||||||||    
T  22801126 ttctaaacccttgtttcagccccctctatct------caaagtttactctgatacaaggtctatatttatagt 22801192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 40091671 - 40091745
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||| |||||||||||||||||||||||||||||||||      |||||||| || ||||||||||||||||||||||||    
T  40091671 tgttgtctttctaaacccttgtttcagccccctctatct------caaagtttactttgatacaaggtctatatttatagt 40091745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 24446828 - 24446909
Alignment:
Q  9 ccctagctgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||| |||||||||||||||||||||||||||||||||||||||      ||| |||| | ||||||||| |||||||||||||||    
T  24446828 ccctagttgttgcctttctaaacccttgtttcagccccctctatct------caaggtttacactgatacaatgtctatatttatagt 24446909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 36921750 - 36921822
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttat 93  Q
    |||||||||||||| ||||||||||| |||||||||||||||    ||||||| ||||||||||||||||||||||||    
T  36921750 tgttgcctttctaagcccttgtttca-ccccctctatctctc----aaagtttactctgatacaaggtctatatttat 36921822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 255 - 354
Target Start/End: Complemental strand, 19322510 - 19322410
Alignment:
Q  255 gtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaa-tattcttcttccatcaaattttgagtcatactaca 353  Q
    |||||||||||||||||||| | ||||||| |||        ||||||||||||||||||| || |||||| | ||||||||||||||||||||||||||    
T  19322510 gtccataaatatattttcagtataaaatatatttaaaacaaatcttttatatttttagcaaaaaatattctccatccatcaaattttgagtcatactaca 19322411  T
Q  354 a 354  Q
    |    
T  19322410 a 19322410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 346
Target Start/End: Original strand, 38209098 - 38209259
Alignment:
Q  190 aatattccctttcaaa-atatatttgcatcaaatcgtccttcatacgatacaaaaatatatt--tattgtc--cataaatatattttcagcacaaaatat 284  Q
    |||||||| ||||||| |||||||||||||||||| ||||||||||  ||||||||||||||  |||| ||  ||  ||| |  ||  ||||||||||||    
T  38209098 aatattccttttcaaatatatatttgcatcaaatcttccttcatacagtacaaaaatatatttatattttcaacaacaatcttcttgaagcacaaaatat 38209197  T
Q  285 ctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 346  Q
     |||        ||||||||||||||| |||||||||| ||| |||||||||||||||||||    
T  38209198 atttaaaacaaatcttttatatttttaacaacaatatttttcatccatcaaattttgagtca 38209259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 14633396 - 14633319
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    ||||||||||||||||| ||||||||||||  ||||||||      ||||||| |||||||||||||||||||||||||||||||    
T  14633396 tgttgcctttctaaacctttgtttcagccct-tctatctc------aaagtttactctgatacaaggtctatatttatagtgaaa 14633319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 16932045 - 16932119
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||| ||||||||||||||| ||||||||||||||||      ||||||||||| ||||||||||| ||||||||||||    
T  16932045 tgttgcttttctaaacccttgtatcagccccctctatct------caaagtttgctttgatacaaggtttatatttatagt 16932119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 16453386 - 16453313
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatag 95  Q
    |||||||||| |||||||||||||||||||||||||||||||       |||||||||||||||| | ||||||||||||    
T  16453386 tgttgcctttttaaacccttgtttcagccccctctatctctcg------gtttgctctgatacaaagcctatatttatag 16453313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 31849855 - 31849929
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||| ||     ||||||||||||||||||  |||||||| ||||    
T  31849855 tgttgcctttctaaacccttgtttcagccccctctatctc-ct-----agtttgctctgatacaagacctatatttctagt 31849929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 273
Target Start/End: Original strand, 29609838 - 29609897
Alignment:
Q  214 gcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttca 273  Q
    |||||||||| ||||||||||| |||||||||||||||| | | ||||||||||||||||    
T  29609838 gcatcaaatcttccttcatacggtacaaaaatatatttactcttcataaatatattttca 29609897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 37313322 - 37313361
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37313322 tgttgcctttctaaacccttgtttcagccccctctatctc 37313361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 2891394 - 2891356
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatct 54  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2891394 tgttgcctttctaaacccttgtttcagccccctctatct 2891356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 13544020 - 13543957
Alignment:
Q  32 ccttgtttcagccccctctatctctctcgcaaagtttgc-tctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||  |||||||| | ||||||||||| ||||||||||||||    
T  13544020 ccttgtttcagccccctctatctctct--caaagtttacatctgatacaagatctatatttatagt 13543957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 24879066 - 24878992
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||| ||||||||||||| |||||||||||||||||||      | |||||| ||| |||||||||||||||||||||||    
T  24879066 tgttgtctttctaaaccctagtttcagccccctctatct------ccaagtttactcggatacaaggtctatatttatagt 24878992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 36378369 - 36378295
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||||||||||||||||||||||||| |||||||      ||| ||||  |||||||||| |||||||||||||||    
T  36378369 tgttgcctttctaaacccttgtttcagccccgtctatct------caaggtttattctgatacaaagtctatatttatagt 36378295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 52942702 - 52942781
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctg--atacaaggtctatatttatagtgaaa 100  Q
    ||||||||||||||||||||||||||| |||||||||||      ||||||||  ||||  ||||||||||||||||||||||||||    
T  52942702 tgttgcctttctaaacccttgtttcag-cccctctatct------caaagtttagtctgatatacaaggtctatatttatagtgaaa 52942781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 3824826 - 3824903
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaag-tttgctctgatacaaggtctatatttatagt 96  Q
    |||||| ||||||||||  ||||||||||||||||||||||||  |||||   | |||||||||||||||||||||||||||    
T  3824826 tgttgcttttctaaacc--tgtttcagccccctctatctctct--caaagaaatactctgatacaaggtctatatttatagt 3824903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 3937465 - 3937504
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  3937465 tgttgcctttctaaacccttgtttcagctccctctatctc 3937504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 276
Target Start/End: Original strand, 5516701 - 5516752
Alignment:
Q  225 tccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 276  Q
    |||||||||||||| ||||||||||||||| || ||||||||||||| ||||    
T  5516701 tccttcatacgataaaaaaatatatttattatctataaatatatttttagca 5516752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 22780629 - 22780672
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctc 59  Q
    |||||| ||||||||||| |||||||||||||||||||||||||    
T  22780629 tgttgcttttctaaacccctgtttcagccccctctatctctctc 22780672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 22782994 - 22783037
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctc 59  Q
    |||||| ||||||||||| |||||||||||||||||||||||||    
T  22782994 tgttgcttttctaaacccctgtttcagccccctctatctctctc 22783037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 33415743 - 33415782
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  33415743 tgttacctttctaaacccttgtttcagccccctctatctc 33415782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 38928434 - 38928473
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  38928434 tgttgcctttctaaactcttgtttcagccccctctatctc 38928473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 25357713 - 25357640
Alignment:
Q  23 tttctaaacccttgttt-cagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||||||||||| ||||||| |||  ||||||| ||| |||| || ||||||||||||||||||||||||    
T  25357713 tttctaaacccttgttttcagcccc-tctcactctctctcaaggtttactttgatacaaggtctatatttatagt 25357640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 19095951 - 19095885
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||      ||| |||| | ||||||||| |||||||||||||||    
T  19095951 ttctaaacccttgtttcagccccctctatct------caaggtttacactgatacaatgtctatatttatagt 19095885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 38270242 - 38270316
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||||||||||||||||||||||| | |||||||      ||| |||| | ||||||||| |||||||||||||||    
T  38270242 tgttgcctttctaaacccttgtttcagcctcttctatct------caaggtttacactgatacaatgtctatatttatagt 38270316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 107
Target Start/End: Complemental strand, 9863736 - 9863700
Alignment:
Q  71 tctgatacaaggtctatatttatagtgaaatataact 107  Q
    ||||||||||||||||||||||||| |||||||||||    
T  9863736 tctgatacaaggtctatatttatagagaaatataact 9863700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 145
Target Start/End: Original strand, 29609767 - 29609823
Alignment:
Q  86 atatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgttt 145  Q
    |||||||||| ||||||  |||||||||||||||||||||||||| ||| ||||||||||    
T  29609767 atatttatagagaaata--actcataaatttggaacgaatatcacgctg-agatacgttt 29609823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 12396101 - 12396140
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||| ||||||||||||||| ||||||||    
T  12396101 tgttgcctttctaaatccttgtttcagccccatctatctc 12396140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 12401063 - 12401102
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||| ||||||||||||||| ||||||||    
T  12401063 tgttgcctttctaaatccttgtttcagccccatctatctc 12401102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 276
Target Start/End: Original strand, 14647175 - 14647214
Alignment:
Q  237 tacaaaaatatatttattgtccataaatatattttcagca 276  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  14647175 tacaaaaatatatttgttgtccatgaatatattttcagca 14647214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 342
Target Start/End: Original strand, 29609948 - 29609983
Alignment:
Q  307 ttttagcaacaatattcttcttccatcaaattttga 342  Q
    |||||||||||||||||||| |||||||||||||||    
T  29609948 ttttagcaacaatattcttcatccatcaaattttga 29609983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 141
Target Start/End: Original strand, 32274204 - 32274271
Alignment:
Q  74 gatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatac 141  Q
    |||||||| ||| ||||||||   ||||||||||| |||| |||||||| |||||||||| |||||||    
T  32274204 gatacaagatctgtatttatataaaaatataactcgtaaacttggaacggatatcacactaaagatac 32274271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 129
Target Start/End: Original strand, 38208986 - 38209044
Alignment:
Q  71 tctgatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatca 129  Q
    |||||||||| || ||||||||||  |||||||||||||||||| ||||| | ||||||    
T  38208986 tctgatacaaagtttatatttataaagaaatataactcataaatctggaatggatatca 38209044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 346
Target Start/End: Original strand, 54929220 - 54929267
Alignment:
Q  297 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 346  Q
    |||||||||||||||||||||||||| |  |||||||||||||| |||||    
T  54929220 tcttttatatttttagcaacaatattat--ttccatcaaattttaagtca 54929267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 16455356 - 16455323
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatctctc 57  Q
    ||||||||||||||||||||||||| ||||||||    
T  16455356 ttctaaacccttgtttcagccccctttatctctc 16455323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 340
Target Start/End: Original strand, 5516793 - 5516833
Alignment:
Q  300 tttatatttttagcaacaatattcttcttccatcaaatttt 340  Q
    ||||||||||||||||||||||||| | | |||||||||||    
T  5516793 tttatatttttagcaacaatattctccattcatcaaatttt 5516833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 44
Target Start/End: Original strand, 18409603 - 18409631
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagcc 44  Q
    |||||||||||||||||||||||||||||    
T  18409603 tgttgcctttctaaacccttgtttcagcc 18409631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 216; Significance: 1e-118; HSPs: 4)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 16 - 380
Target Start/End: Complemental strand, 52043 - 51685
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||| ||||||||||||||||||||||||||||||||||    |||||||  | |||||||||||||||||||||||| ||| ||||||||||||||    
T  52043 tgttgccattctaaacccttgtttcagccccctctatctctc----aaagtttagtatgatacaaggtctatatttatagtaaaagtataactcataaat 51948  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    |||||||||||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  51947 ttggaacgaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 51851  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||       ||||||||||||||||||    
T  51850 catcaaatcgttctttatacggtacaaaaatatatttattgtccataaatatattttcaccacaaaatatatttgaaacaaatcttttatatttttagca 51751  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 380  Q
    ||| |||||| | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  51750 acattattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattag 51685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 297 - 354
Target Start/End: Complemental strand, 50218 - 50161
Alignment:
Q  297 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  50218 tcttttatatttttagcaacattattcttcatccatcaaattttgagtcatactacaa 50161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 183896 - 183973
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    ||||||||||||||||| ||||||||||||  ||||||||      ||||||| |||||||||||||||||||||||||||||||    
T  183896 tgttgcctttctaaacctttgtttcagccct-tctatctc------aaagtttactctgatacaaggtctatatttatagtgaaa 183973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 276
Target Start/End: Complemental strand, 170115 - 170076
Alignment:
Q  237 tacaaaaatatatttattgtccataaatatattttcagca 276  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  170115 tacaaaaatatatttgttgtccatgaatatattttcagca 170076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 212; Significance: 1e-116; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 16 - 380
Target Start/End: Original strand, 35215842 - 35216208
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc----aaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcat 110  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |    |||||||   ||||||||||||||||||||||||| ||| ||||||||||    
T  35215842 tgttgcttttctaaacccttgtttcagccccctctatctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcat 35215941  T
Q  111 aaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatata 210  Q
    ||||||||||| |||| ||||| |||||| | |||         |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  35215942 aaatttggaacaaataccacaccgaagattcattt---ttttttctccttcagtgaaagaatatctgcatcaaaaatataatattccctttcaaaatata 35216038  T
Q  211 tttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattttt 310  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||    
T  35216039 tttgcatcaaatcgttctttatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttt 35216138  T
Q  311 agcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 380  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  35216139 agcaacaatattcttcatccatcaaattttgagtcatactacaacattctccaccttgactctaaattag 35216208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 16 - 354
Target Start/End: Original strand, 23452493 - 23452827
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||||||||||||||||||||||||||||||| ||||||||  |||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  23452493 tgttgcctttctaaacccttgtttcagccccctctgtctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 23452590  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||| |||||||||| ||| |||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23452591 ttggaacaaataccacactgaaggtactttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 23452687  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||       ||||||||||||||||||    
T  23452688 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatttattttcagcataaaatatatttgaaacaaatcttttatatttttagca 23452787  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  23452788 acaatattctccatccatcaaattttgagtcatactacaa 23452827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 42452782 - 42452451
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||| ||||||||||||| | ||| ||||||||||||||    
T  42452782 tgttgcctttctaaacccttgtttcagccccctctatctcc------aagtttgctctgatacaatgtctatatttataataaaagtataactcataaat 42452689  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||| |||| ||||| |||||||| |||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42452688 ttggaacaaataccacaccgaagatacattt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 42452591  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  42452590 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 42452491  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  42452490 acaatattcttcatccatcaaattttaagtcatactacaa 42452451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 16 - 354
Target Start/End: Original strand, 35218219 - 35218563
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc--------aaagtttgctctgatacaaggtctatatttatagtgaaa-tataac 106  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |        |||||||   || |||||||||||||||||||||| ||| ||||||    
T  35218219 tgttgcttttctaaacccttgtttcagccccctctatctctctctctctctctcaaagtttagccttatacaaggtctatatttatagtaaaagtataac 35218318  T
Q  107 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 206  Q
    ||||||||||||| | |||| |||||||||||| |||||         |||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  35218319 tcataaatttggagcaaataccacactgaagattcgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaa 35218415  T
Q  207 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 306  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  35218416 tatatttgcatcaaatcgttctttatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 35218515  T
Q  307 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  35218516 ttttagcaacaatattcttcatccatcaaattttgagtcatactacaa 35218563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 16 - 354
Target Start/End: Original strand, 42923765 - 42924092
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    ||||||| ||||||||||||||||||||| ||||||||||||    || |||| || |||| ||||||||||||||||||| ||| ||||||||||||||    
T  42923765 tgttgccattctaaacccttgtttcagcctcctctatctctc----aaggtttactatgattcaaggtctatatttatagtaaaagtataactcataaat 42923860  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    ||||||||||   ||| |||||||||| | |         |||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||    
T  42923861 ttggaacgaa---cac-ctgaagatacttat----ttgttctccttcagtgaaagaatatttgcatcaaaaatataatatttcttttcaaaatatatttg 42923952  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  42923953 catcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 42924052  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  42924053 acaatattctccatccatcaaattttgagtcatactacaa 42924092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 71 - 354
Target Start/End: Original strand, 27583631 - 27583905
Alignment:
Q  71 tctgatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaaga 170  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||| ||||        ||||||||||||||||    
T  27583631 tctgatacaagatctatatttatagagaaatataactcataaatttggaacggatatcacgctgaagatacatttctttttt--ctccttcagtgaaaga 27583728  T
Q  171 atatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattt 270  Q
    |||||||||| |||       |||||| ||||||||||||||||||||||||  ||||||||| | || ||||||||||||||||| ||||||||||| |    
T  27583729 atatttgcatcaaa-------tattccttttcaaaatatatttgcatcaaatattccttcatatggtataaaaatatatttattgttcataaatatatct 27583821  T
Q  271 tcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||||||| ||||       |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  27583822 tcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaaatttgagtcatactacaa 27583905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 190 - 346
Target Start/End: Original strand, 28568584 - 28568740
Alignment:
Q  190 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttg 289  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||    
T  28568584 aatattccctttcaaaatatatttgcatcaaatcttccttcacacgatacaaaaatatatttattgtccataaatatattttcaaaacaaaatatatttg 28568683  T
Q  290 nnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 346  Q
           ||||||||| |||||||||||||||||||| || ||||||||||||||||    
T  28568684 aaacaaatcttttatagttttagcaacaatattcttcatctatcaaattttgagtca 28568740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 80 - 276
Target Start/End: Complemental strand, 15693858 - 15693669
Alignment:
Q  80 aggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaaga-atatttgc 178  Q
    |||| ||||||||||| |||||||||||||||||||| ||||| ||||||| |||||||||||||||        |||||||||   || | ||||||||    
T  15693858 aggtttatatttatagagaaatataactcataaatttagaacggatatcacgctgaagatacgtttcttttttt-ctccttcagcacaaaatatatttgc 15693760  T
Q  179 ataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 276  Q
    || |||       ||| |||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  15693759 atcaaa-------tatcccctttaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatttattgcccataaatatattttcagca 15693669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 5377685 - 5377767
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||    
T  5377685 tgttgcctttctaaacccttgtttcagtcccctctatctctct--caaagtttgctctgaaacaaggtctatatttatagtgaaa 5377767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 226 - 354
Target Start/End: Original strand, 27136367 - 27136503
Alignment:
Q  226 ccttcatacgatacaaaaatatatttattgtccataaatatattt--------tcagcacaaaatatctttgnnnnnnntcttttatatttttagcaaca 317  Q
    |||||||||| |||||||||||||||||| |||||||||||||||        ||| |||||||||| ||||       |||||||||||||||||| ||    
T  27136367 ccttcatacggtacaaaaatatatttattttccataaatatatttatatattttcaacacaaaatatatttgaaacaaatcttttatatttttagcacca 27136466  T
Q  318 atattcttcttccatcaaattttgagtcatactacaa 354  Q
    ||||||||| |||||||||||||||||||||||||||    
T  27136467 atattcttcatccatcaaattttgagtcatactacaa 27136503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 24162468 - 24162542
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||    
T  24162468 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatatttatagt 24162542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 261 - 349
Target Start/End: Original strand, 34575608 - 34575696
Alignment:
Q  261 aaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatac 349  Q
    |||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34575608 aaatatattttcagcacaaaatatatttagaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttgagtcatac 34575696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 190 - 275
Target Start/End: Complemental strand, 7502723 - 7502638
Alignment:
Q  190 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagc 275  Q
    |||||| ||||| ||||||||||||||||||||| ||  |||||| |||||||||||| |||||||| ||||||||||||||||||    
T  7502723 aatatttcctttaaaaatatatttgcatcaaatcttctgtcatacaatacaaaaatatttttattgttcataaatatattttcagc 7502638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 13910300 - 13910374
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      | ||||||||||||||||||||||||||||||||||    
T  13910300 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggtctatatttatagt 13910374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 19504601 - 19504675
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      | ||||||||||||||||||||||||||||||||||    
T  19504601 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggtctatatttatagt 19504675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 40032314 - 40032388
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      |||||||| |||||||||||||||||||||||||||    
T  40032314 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttactctgatacaaggtctatatttatagt 40032388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 205 - 276
Target Start/End: Complemental strand, 39287042 - 39286971
Alignment:
Q  205 aatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 276  Q
    ||||||||||||||||||| || |||||| | ||||||||||||||||||||||||||||||||||| ||||    
T  39287042 aatatatttgcatcaaatcttcattcatatggtacaaaaatatatttattgtccataaatatattttaagca 39286971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 45280248 - 45280319
Alignment:
Q  23 tttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    |||||||||||||||||||||||||||||||||      |||||||||||||||||||||| ||||||||||||||||    
T  45280248 tttctaaacccttgtttcagccccctctatctc------aaagtttgctctgatacaaggtatatatttatagtgaaa 45280319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 27104798 - 27104724
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||| ||||||||||||||||||||||||||      |||||||| |||||||||||||||||||||||||||    
T  27104798 tgttgcctttctgaacccttgtttcagccccctctatct------caaagttttctctgatacaaggtctatatttatagt 27104724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 42064514 - 42064440
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||| ||||||||||      | ||||||||||||||||||||||||||||||||||    
T  42064514 tgttgcctttctaaacccttgtttcagctccctctatct------ccaagtttgctctgatacaaggtctatatttatagt 42064440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 21520949 - 21521025
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||||||||||||||||||||||||| |||||||||    ||||||||  ||||||||||||| ||||||||||||    
T  21520949 tgttgcctttctaaacccttgtttcagccccatctatctct----caaagtttagtctgatacaaggtttatatttatagt 21521025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 276
Target Start/End: Original strand, 41304806 - 41304884
Alignment:
Q  197 cctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 276  Q
    ||||| ||||||||||||||||||||| ||||||||| | |||||||||||||||| | |||||||||||||| ||||||    
T  41304806 cctttaaaaatatatttgcatcaaatcttccttcatatg-tacaaaaatatatttactatccataaatatattgtcagca 41304884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 19502267 - 19502346
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaat 101  Q
    |||||||||||||||| |||||||||||||||| ||||||       |||||||||||||||||||||||||||||||||| ||||    
T  19502267 tgttgcctttctaaactcttgtttcagccccctttatctcc------aagtttgctctgatacaaggtctatatttatagtaaaat 19502346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 34575528 - 34575617
Alignment:
Q  155 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatattt 251  Q
    |||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||||||  ||||| ||| | |||||||||||||||    
T  34575528 ctccttcagtgaaagaatatttgcatcaaa-------tattccctttcaaaatatatttgcatcaaattttcctttatatggtacaaaaatatattt 34575617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 198 - 276
Target Start/End: Original strand, 41303457 - 41303535
Alignment:
Q  198 ctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 276  Q
    |||| |||||||||||| ||||| || ||||||| ||| ||||||| |||||||| |||||||||||||||||||||||    
T  41303457 ctttaaaaatatatttgaatcaattcttccttcacacggtacaaaattatatttactgtccataaatatattttcagca 41303535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 6264401 - 6264475
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||||||||||| |||||||||||||||||||||      ||||||||  ||||||||||||||||||||||||||    
T  6264401 tgttgcctttctaaacctttgtttcagccccctctatct------caaagtttagtctgatacaaggtctatatttatagt 6264475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 78 - 145
Target Start/End: Original strand, 41304696 - 41304763
Alignment:
Q  78 caaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgttt 145  Q
    |||| ||| ||||||||| |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  41304696 caagatctgtatttatagagaaatataactcataaatttggaatggatatcacgctgaagatacgttt 41304763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 22163203 - 22163277
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||||||||| |||||||||||||||||||||||      |||||||| | ||||||||| |||||||||||||||    
T  22163203 tgttgcctttctaaatccttgtttcagccccctctatct------caaagtttacactgatacaatgtctatatttatagt 22163277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 22287592 - 22287666
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||||||||||||||||||||||||||| |||||      |||||||| || | ||||||||||||||||||||||    
T  22287592 tgttgcctttctaaacccttgtttcagccccctatatct------caaagtttactttaatacaaggtctatatttatagt 22287666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 22407665 - 22407739
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||| |||| |||||      || ||||| |||||||||||||||||||||||||||    
T  22407665 tgttgcctttctaaacccttgtttcagcaccctatatct------cacagtttactctgatacaaggtctatatttatagt 22407739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 297 - 346
Target Start/End: Complemental strand, 28568395 - 28568346
Alignment:
Q  297 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 346  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  28568395 tcttttatatttttaacaacaatattcttcatccatcaaattttgagtca 28568346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 31733021 - 31733095
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      ||| |||| ||||| ||||| |||||||||||||||    
T  31733021 tgttgcctttctaaacccttgtttcagccccctctatct------caatgtttactctgttacaaagtctatatttatagt 31733095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 38020201 - 38020161
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctct 56  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  38020201 tgttgcctttctaaacccttgtttcagccccctctatctct 38020161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 19007639 - 19007600
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19007639 tgttgcctttctaaacccttgtttcagccccctctatctc 19007600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 43623824 - 43623898
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||||||||||| |||||||| ||||||||||||| |      ||||| |||||||||||||||||| ||||||||    
T  43623824 tgttgcctttctaaaccattgtttcacccccctctatctccc------agtttactctgatacaaggtctatttttatagt 43623898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 28196636 - 28196597
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  28196636 tgttgcctttctaaacctttgtttcagccccctctatctc 28196597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 346
Target Start/End: Complemental strand, 15693629 - 15693583
Alignment:
Q  300 tttatatttttagcaacaatattcttcttccatcaaattttgagtca 346  Q
    ||||||||||||||||||||||| ||| ||||||||||||| |||||    
T  15693629 tttatatttttagcaacaatattattcatccatcaaattttaagtca 15693583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 37963190 - 37963257
Alignment:
Q  23 tttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||||||||||||||||||||||||||      ||| |||| |||| |||||| |||||||||||||||    
T  37963190 tttctaaacccttgtttcagccccctctatct------caaggtttactcttatacaaagtctatatttatagt 37963257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 141
Target Start/End: Original strand, 41303341 - 41303411
Alignment:
Q  71 tctgatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatac 141  Q
    ||||||||||| | | ||||||||| |||||||||||| ||||||||||| | ||||||| |||| |||||    
T  41303341 tctgatacaagatatttatttatagagaaatataactcgtaaatttggaatggatatcacgctgatgatac 41303411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 55
Target Start/End: Complemental strand, 17849110 - 17849077
Alignment:
Q  22 ctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||||||||||||||||||||    
T  17849110 ctttctaaacccttgtttcagccccctctatctc 17849077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 22874134 - 22874102
Alignment:
Q  23 tttctaaacccttgtttcagccccctctatctc 55  Q
    |||||||||||||||||||||||||||||||||    
T  22874134 tttctaaacccttgtttcagccccctctatctc 22874102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 11739816 - 11739855
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||| ||||||||||||||||| ||||||||||||||||    
T  11739816 tgttgtctttctaaacccttgttccagccccctctatctc 11739855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 34979835 - 34979874
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  34979835 tgttacctttctaaacgcttgtttcagccccctctatctc 34979874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 38020142 - 38020103
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||||||||||||||||||||| || |||||||||||||    
T  38020142 tgttgcctttctaaacccttgttccaaccccctctatctc 38020103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 145
Target Start/End: Complemental strand, 7502835 - 7502762
Alignment:
Q  74 gatacaaggtctatatttatagtgaaatata--actcataaatttggaacgaatatcacactgaagatacgttt 145  Q
    |||||| | ||| ||||||||| ||||||||  |||| ||||||||||| | ||||||| ||||||||||||||    
T  7502835 gatacatgatctgtatttatagagaaatatataactcgtaaatttggaatggatatcacgctgaagatacgttt 7502762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 18800565 - 18800632
Alignment:
Q  23 tttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||| |||||      | | |||| | |||||||||||||||||||||||||    
T  18800565 tttctaaacccttgtttcagccccctatatct------ccatgtttaccctgatacaaggtctatatttatagt 18800632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 346
Target Start/End: Original strand, 41303573 - 41303623
Alignment:
Q  297 tcttttatatttt-tagcaacaatattcttcttccatcaaattttgagtca 346  Q
    ||||||||||||| |||||||||| |||||| ||||||||||| |||||||    
T  41303573 tcttttatattttttagcaacaatcttcttcatccatcaaattctgagtca 41303623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 20589635 - 20589586
Alignment:
Q  47 ctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||| |||||||| ||| ||||  ||||||||||||||||||||||||||    
T  20589635 ctctctctctctctcaaggtttcatctgatacaaggtctatatttatagt 20589586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 96
Target Start/End: Original strand, 36559072 - 36559105
Alignment:
Q  63 aagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||| ||||||||||||||||||||||||    
T  36559072 aagtttgctttgatacaaggtctatatttatagt 36559105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 96
Target Start/End: Original strand, 36561349 - 36561382
Alignment:
Q  63 aagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||| ||||||||||||||||||||||||    
T  36561349 aagtttgctttgatacaaggtctatatttatagt 36561382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 40699284 - 40699235
Alignment:
Q  47 ctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||| |||||||| ||| |||| ||||||| |||||||||||||||||||    
T  40699284 ctctctctctctctcaaggtttactctgatgcaaggtctatatttatagt 40699235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 45239238 - 45239275
Alignment:
Q  22 ctttctaaacccttgtttcagccccctctatctctctc 59  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  45239238 ctttctaaatcattgtttcagccccctctatctctctc 45239275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 96
Target Start/End: Original strand, 45332389 - 45332422
Alignment:
Q  63 aagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||| ||||||||||||||||||||||||    
T  45332389 aagtttgctttgatacaaggtctatatttatagt 45332422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 184; Significance: 2e-99; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 24 - 354
Target Start/End: Original strand, 11737 - 12059
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacg 122  Q
    ||||||| || |||||||||||||||||||||       | |||| ||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  11737 ttctaaatccctgtttcagccccctctatctcc------aggtttactctgattcaaggtctatatttatagtaaaagtataactcataaatttggaacg 11830  T
Q  123 aatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaat 222  Q
    |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  11831 aataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 11927  T
Q  223 cgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatatt 322  Q
    ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       | ||||||||||||||||||||||||    
T  11928 cgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaattttttatatttttagcaacaatatt 12027  T
Q  323 cttcttccatcaaattttgagtcatactacaa 354  Q
    || | ||||||||||||||| |||||||||||    
T  12028 ctccatccatcaaattttgaatcatactacaa 12059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 176; Significance: 1e-94; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 79217 - 78885
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 114  Q
    |||||||||||||||||||||||| |||||||||||||||      ||  ||| ||||||| ||||||||||||||||||| ||  ||||||||||||||    
T  79217 tgttgcctttctaaacccttgttttagccccctctatctc------aagttttactctgattcaaggtctatatttatagtaaaggtataactcataaat 79124  T
Q  115 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 214  Q
    |||||||||||| |||||||||||||| |||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  79123 ttggaacgaataccacactgaagatacattt-tttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 79025  T
Q  215 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 314  Q
    ||||||||||| ||||||||  |||||||||||||||||| |||||||||||||||| |||| ||||||| ||||       ||||||||||||||||||    
T  79024 catcaaatcgttcttcatacagtacaaaaatatatttattatccataaatatatttttagcagaaaatatatttgagacaaatcttttatatttttagca 78925  T
Q  315 acaatattcttcttccatcaaattttgagtcatactacaa 354  Q
    |||||||||| | ||||||||||||| |||||||||||||    
T  78924 acaatattctccatccatcaaattttaagtcatactacaa 78885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 89; Significance: 8e-43; HSPs: 2)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 208 - 361
Target Start/End: Complemental strand, 4694 - 4541
Alignment:
Q  208 atatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatt 307  Q
    ||||||||||||||| |||||||||||  ||||||||||||| ||||||||||||||||||||||||||| |||||| || |       |||||||||||    
T  4694 atatttgcatcaaattgtccttcatacagtacaaaaatatatatattgtccataaatatattttcagcacgaaatatattcgaaacaaatcttttatatt 4595  T
Q  308 tttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctc 361  Q
    ||||||||||||||||||| ||||||||||||||||| ||||| ||| ||||||    
T  4594 tttagcaacaatattcttcatccatcaaattttgagttatactgcaacattctc 4541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 65 - 146
Target Start/End: Complemental strand, 4803 - 4722
Alignment:
Q  65 gtttgctctgatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgtttc 146  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4803 gtttactctgatacaaggtctatatttatagagaaatataactcataaatttgaaacgaatatcacactgaagatacgtttc 4722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 81; Significance: 5e-38; HSPs: 2)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 241 - 354
Target Start/End: Original strand, 2070 - 2183
Alignment:
Q  241 aaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaatttt 340  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||||    
T  2070 aaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttt 2169  T
Q  341 gagtcatactacaa 354  Q
    ||||||||||||||    
T  2170 gagtcatactacaa 2183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 24 - 213
Target Start/End: Original strand, 1895 - 2080
Alignment:
Q  24 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgc-tctgatacaaggtctatatttatagtgaaatataactcataaatttggaacg 122  Q
    ||||||||||||||||||||| |||||||||||      | |||| | |||||||||||||||||||||| ||  |||| |||||| ||||||||||| |    
T  1895 ttctaaacccttgtttcagccacctctatctct------aggtttacatctgatacaaggtctatatttagag--aaatgtaactcgtaaatttggaatg 1986  T
Q  123 aatatcacactgaagatacgtttcnnnnnnnn---ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatattt 213  Q
     ||||||| ||||||||| |||||           |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  1987 gatatcacgctgaagataggtttccttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatattt 2080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 262 - 380
Target Start/End: Original strand, 1 - 119
Alignment:
Q  262 aatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctc 361  Q
    ||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||    
T  1 aatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctc 100  T
Q  362 aaccttgactccaaattag 380  Q
     |||||||||| |||||||    
T  101 caccttgactctaaattag 119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 69547 - 69622
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttat 93  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||    
T  69547 tgttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttgctctgatataaggtctatatttat 69622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 73279 - 73357
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||| || ||||||| ||||||||||||||||    
T  73279 tgttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttcctttgatacacggtctatatttatagt 73357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 41739 - 41817
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||||    
T  41739 tgttgcctttctaaacccttgtttcagccccctctatctct------aagtttgctctgatacaaggtctatatttatagtgaaa 41817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0552 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 1087 - 1165
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 100  Q
    ||||||||||||||||||||||||||||||| ||||||||      |||||||||||||||||||||||||||||||||||||||    
T  1087 tgttgcctttctaaacccttgtttcagccccttctatctc------aaagtttgctctgatacaaggtctatatttatagtgaaa 1165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 2912 - 2838
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||| ||||||||||||||    
T  2912 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaagttctatatttatagt 2838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 6231 - 6157
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||| ||||||||||||||||||||||||||||||||      ||||||||||| ||||||||||||||||||||||||    
T  6231 tgttgcttttctaaacccttgtttcagccccctctatct------caaagtttgctttgatacaaggtctatatttatagt 6157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 4029 - 3955
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||  ||||||||||||||||||||||||||    
T  4029 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttagtctgatacaaggtctatatttatagt 3955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 15051 - 14977
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||||||||| | ||||||||||||||||||||||      |||||||||||||||||||||||||||||||||||    
T  15051 tgttgcctttctaaatcattgtttcagccccctctatctc------aaagtttgctctgatacaaggtctatatttatagt 14977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 14638 - 14707
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatat 89  Q
    ||||| ||||||||||| |||||||| ||||||||||||||    ||||||||||||| | |||||||||||||    
T  14638 tgttgtctttctaaaccattgtttcatccccctctatctct----caaagtttgctctaaaacaaggtctatat 14707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 29203 - 29119
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc----aaagtttgctctgatacaaggtctatatttatagt 96  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |    |||||||   |||||||||||||||||||||||||    
T  29203 tgttgcctttttaaacccttgtttcagccccctctatctctctctctctcaaagtttagcctgatacaaggtctatatttatagt 29119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 73 - 1
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaag-tttgctctgatacaaggtctat 87  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||   | ||||||||||||||||||    
T  73 tgttgcttttctaaacccttgtttcagccccctctatctctctctcaaagaaatactctgatacaaggtctat 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 273
Target Start/End: Original strand, 57836 - 57905
Alignment:
Q  203 aaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttca 273  Q
    ||||||||||||||||||||  || |||||||| |||||||||||||||||||| |||| |||||||||||    
T  57836 aaaatatatttgcatcaaattttc-ttcatacggtacaaaaatatatttattgttcatacatatattttca 57905  T

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Target: scaffold0008; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 146
Target Start/End: Original strand, 57740 - 57813
Alignment:
Q  73 tgatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgtttc 146  Q
    ||||||||| | | ||||| ||| ||||||||| ||| |||||||||| | |||| || |||||||||||||||    
T  57740 tgatacaagatatgtatttctagagaaatataattcacaaatttggaatggatattacgctgaagatacgtttc 57813  T

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Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 79891 - 79852
Alignment:
Q  16 tgttgcctttctaaacccttgtttcagccccctctatctc 55  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  79891 tgttgtctttctaaacccttgtttcagccccctctatctc 79852  T

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Target: scaffold0533 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 205 - 252
Target Start/End: Original strand, 1971 - 2018
Alignment:
Q  205 aatatatttgcatcaaatcgtccttcatacgatacaaaaatatattta 252  Q
    |||||||||| |||||||  ||||||||| ||||||||||||||||||    
T  1971 aatatatttgtatcaaatattccttcatatgatacaaaaatatattta 2018  T

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Target: scaffold0474 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 346
Target Start/End: Complemental strand, 10492 - 10443
Alignment:
Q  297 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 346  Q
    ||||||||||||||| ||||||| || ||  |||||||||||||||||||    
T  10492 tcttttatatttttaacaacaatcttttttatccatcaaattttgagtca 10443  T

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Target: scaffold0140 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 22201 - 22168
Alignment:
Q  63 aagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||| ||||||||||||||||||||||||    
T  22201 aagtttgctttgatacaaggtctatatttatagt 22168  T

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Target: scaffold0140; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 24476 - 24443
Alignment:
Q  63 aagtttgctctgatacaaggtctatatttatagt 96  Q
    ||||||||| ||||||||||||||||||||||||    
T  24476 aagtttgctttgatacaaggtctatatttatagt 24443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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