View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17491_low_7 (Length: 297)
Name: NF17491_low_7
Description: NF17491
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17491_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 14 - 289
Target Start/End: Original strand, 11509518 - 11509793
Alignment:
| Q |
14 |
caccacagaacctctttctctgttagcaataccatcaattaccgaacacgctgttccatttccatggcaaatccaatcaaaacctaccatttatccaacc |
113 |
Q |
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| T |
11509518 |
caccacagaacctctttctctgttaccaataccatcaattaccgaacacgctgttccatttccatggcaaatccaatcaaaacctaccatttatccaacc |
11509617 |
T |
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| Q |
114 |
tcactcaaaccgaacttctctccctcaaatctcgtccacgcatcgatttctcttctgttttcgacattgtaacctttctctccccttttcatactcttcc |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11509618 |
tcactcaaaccgaacttctctccctcaaatctcgtccacgcatcgatttctcttctgttttcgacattgtaacctttctctccccttttcatactcttcc |
11509717 |
T |
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| Q |
214 |
tctaatgggtttttatttttcactctcaaaatcatacctttttgctttttcaggtcaaccccattgttgatgatgt |
289 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11509718 |
tctaatgggtttttatttttcactctcaaaatcatacctttttgctttttcaggtcaaccccattgttgatgatgt |
11509793 |
T |
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