View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17493_low_15 (Length: 330)
Name: NF17493_low_15
Description: NF17493
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17493_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 42 - 321
Target Start/End: Complemental strand, 49235758 - 49235479
Alignment:
| Q |
42 |
atatatattataggatgtctaatcggtccaatagcttatacttgcttatttttaacaaacataatctacacaagtatcatgcacaatatgtgttgaggtg |
141 |
Q |
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| T |
49235758 |
atatatattataggatgtctaatcggtccaatagcttatacttgcttatttttaccaaacataatctacacaagtatcatgcacaatatgtgttgaggtg |
49235659 |
T |
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| Q |
142 |
aggttcaatcgtggcaaatttatcacactcgtacgtattacaatacaaattaattaatatcttcacgcaaaaataatattatgatttaattattgactaa |
241 |
Q |
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| T |
49235658 |
aggttcaatcgtggcaaattggtcacactcgtacgtattacaatacaaattaattaatatcttcacgcaaaaataacattatgatttaattattgactaa |
49235559 |
T |
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| Q |
242 |
gatcttcgacgagacctcaagataggaagaagcactactagcaagaggaatgctaatgatccaagctgagacagaataat |
321 |
Q |
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| T |
49235558 |
gatcttcgacgagacctcaagataggaagaagcactactagcaagaggaatactaatgatccaagctgagacagaataat |
49235479 |
T |
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