View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17493_low_27 (Length: 226)
Name: NF17493_low_27
Description: NF17493
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17493_low_27 |
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Alignment Details
Target: chr2 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 15 - 210
Target Start/End: Original strand, 6293191 - 6293386
Alignment:
| Q |
15 |
caaagggataccaaaacttggtatattggatgtttgtatatgtgttggtttcaatcctttatgtgtgaaggaagaccttcctttattgtgggattcatgt |
114 |
Q |
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| T |
6293191 |
caaagggataccaaaacttggtatattggatgtttgtatatgtgttggtttcaatcctttatgtgtgaaggaagaccttcctttattgtgggattcatgt |
6293290 |
T |
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| Q |
115 |
ctatacattaagtacatattggaattttacttctttcaaagtggccaaaaaagatacctagttgaacacaaaggcactttcagaatctcaaaaatg |
210 |
Q |
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| T |
6293291 |
ctatacattaagtacatattggaattttacttctttcaaagtggccaaaaaagatacctagttgaacacaaaggcactttcagaatctcaaaaatg |
6293386 |
T |
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