View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17494_low_1 (Length: 1011)
Name: NF17494_low_1
Description: NF17494
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17494_low_1 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 544; Significance: 0; HSPs: 11)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 544; E-Value: 0
Query Start/End: Original strand, 403 - 999
Target Start/End: Original strand, 1962277 - 1962868
Alignment:
| Q |
403 |
agatacacttggtgcctgttttgttcttcccaacatgtgtggctcttattcattcgttttgaaacttctcaaacatatacatactgtttattttgcagaa |
502 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
1962277 |
agatacacttggtgcctgttttgttcttcccaacatgtgtggctcttattcattcgttttgaaacttctcaaacatatacataatgttgattttgcagaa |
1962376 |
T |
|
| Q |
503 |
catgtataggtagttgagttgagttctgtttttggttttcctttcacaagcatnnnnnnntattaacttataagctgtaaactaagaacaaattttcatg |
602 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1962377 |
catgtataggtagttgagtt-----ctgtttttggttttcctttcacaagcataaaaaaatattaacttataagctgtaaactaagaacaaattttcatg |
1962471 |
T |
|
| Q |
603 |
gagaaaacagttcatattgcagttgttcctggtgttggatatagccacttattcccaattcttcaattctccaaactacttgttcagcttcatccatact |
702 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1962472 |
gagaaaacagttcatattgcagttgttcctggtgttggatatagccacttattcccaattcttcaattctccaaactacttgttcagcttcatccatact |
1962571 |
T |
|
| Q |
703 |
ttcatgtcacatgcttcattccctcacttggttctctcccaactgattcaaaaacaatacttgaaactcttccatcaaacatcagctgtacttttcttcc |
802 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1962572 |
ttcatgtcacatgcttcattccctcacttggttctctcccaactgattcaaaaacaatacttgaaactcttccatcaaacatcagctgtacttttcttcc |
1962671 |
T |
|
| Q |
803 |
accagtgaactctaatgacctaccacaaggggttgctttagcccttcaacttcagctcacactaactcactcactgccatctatacatcaggccttgaag |
902 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1962672 |
accagtgaactctaatgacctaccacaaggggttgctttagcccttcaacttcagctcacactaactcactcactgccatctatacatcaggccttgaag |
1962771 |
T |
|
| Q |
903 |
tccttaactttaaggacaccctttgttgccttggtggttgatgcattagcaattgatgcactagattttgctaaggaattcaacttgttgtcctatg |
999 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1962772 |
tccttaactttaagggcaccctttgttgccttggtggttgatgcattagcaattgatgcactagattttgctaaggaattcaacttgttgtcctatg |
1962868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 422 - 999
Target Start/End: Complemental strand, 2016143 - 2015561
Alignment:
| Q |
422 |
tttgttcttcccaacatgtgtggctcttattcattcgttttgaaacttctcaaacatatacatactgtttattttgcagaacatgtataggtagttgagt |
521 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||| ||||||| ||| |||||||||| |||||| |||||| ||||| |
|
|
| T |
2016143 |
tttgttcttcccatcatgtgtggctcttattcat-cgttttgaaacttgtcaaacacatacataatgtcaattttgcagagcatgtagaggtaggtgagt |
2016045 |
T |
|
| Q |
522 |
tgagttctgtttttggttttcctttcacaagcatnnnnnnntattaac-----------ttataagctgtaaactaagaacaaattttcatggagaaaac |
610 |
Q |
| |
|
| |||||||||||||||||||||||||||| | || |||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
2016044 |
t-----ctgtttttggttttcctttcacaagcataaaaaaaaaaaaaaaaaaaaaaaagttataagcggtaaactaagaacaaatttttatggagaaaac |
2015950 |
T |
|
| Q |
611 |
agttcatattgcagttgttcctggtgttggatatagccacttattcccaattcttcaattctccaaactacttgttcagcttcatccatactttcatgtc |
710 |
Q |
| |
|
| ||||||||||||||||||| ||||||||||||||||| || || | ||||||||||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
2015949 |
aattcatattgcagttgttccaggtgttggatatagccatttggtctctattcttcaattctccaagagacttgttcagcttcatccaaactttcatgtc |
2015850 |
T |
|
| Q |
711 |
acatgcttcattccctcacttggttctctcccaactgattcaaaaacaatacttgaaactcttccatcaaacatcagctgtacttttcttccaccagtga |
810 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2015849 |
acatgcttcattccctcacttggttctctcccaactgattcaaaaacaatccttcaaactcttccatcaaacatcagctgtacttttcttccaccagtga |
2015750 |
T |
|
| Q |
811 |
actctaatgacctaccacaaggggttgctttagcccttcaacttcagctcacactaactcactcactgccatctatacatcaggccttgaagtccttaac |
910 |
Q |
| |
|
|||| |||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2015749 |
actccaatgacctaccacaagggattgctttagtacttcaacttcagctcacactgactcactcactgccatctatacatcaggccttgaagtccttaac |
2015650 |
T |
|
| Q |
911 |
tttaaggacaccctttgttgccttggtggttgatgcattagcaattgatgcactagattttgctaaggaattcaacttgttgtcctatg |
999 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| || |||||| |||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
2015649 |
tttaaagacaccctttgttgccttggtggttgatatatcagcaatggatgcactggattttgctaaggaattcaacttgttgtcctatg |
2015561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 14 - 400
Target Start/End: Original strand, 1961909 - 1962297
Alignment:
| Q |
14 |
caacatgtgcactctcaatctataaggcgagccaaaattgataagttgtctctatattgtcaaatctaatacaaacccttggcttccaagaacatctgaa |
113 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
1961909 |
caacatgtgcactctcaatctataaggcgagccaaaattgataagttgtctctatattgtcaaatctaatacaaacccttggcttccaagaacatttgaa |
1962008 |
T |
|
| Q |
114 |
aatgtcatgtttgatcaaactccccaaataaagtaacctggcaaatgaatagtagaattaaaaattatatttatccaataattgtattcctaatataaaa |
213 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1962009 |
aatgtcatgtttgatcaaactcccaaaataaagtaacctggcaaatgaatagtagaattaaaaattatatttatccaataattgtattcctaatataaaa |
1962108 |
T |
|
| Q |
214 |
atgataatgatcactaaataaaagtc--nnnnnnnnnccataccaataaataaccagaatgtggcaagtaataaaattcagaagtcaaggctgcgctgtt |
311 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1962109 |
atgataatgatcactaaataaaagtctttttttttttccataccaataaataaccagaatgtggcaagtaataaaattcagaagtcaaggctgcgctgtt |
1962208 |
T |
|
| Q |
312 |
tggtcaatggttggggtgaaagtctgacctgtttgtggtttttacccaattctgtgtgctggacacaaagatacacttggtgcctgttt |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1962209 |
tggtcaatggttggggtgaaagtctgacctgtttgtggtttttacccaattctgtgtgctggacacaaagatacacttggtgcctgttt |
1962297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 304; E-Value: 1e-170
Query Start/End: Original strand, 568 - 999
Target Start/End: Complemental strand, 2019375 - 2018944
Alignment:
| Q |
568 |
acttataagctgtaaactaagaacaaattttcatggagaaaacagttcatattgcagttgttcctggtgttggatatagccacttattcccaattcttca |
667 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||| |
|
|
| T |
2019375 |
acttataagctgtaaactaataactaattttcatggagaaaacagttcatattgcagttgttccaggtgttggatatggccacttattcccgattcttca |
2019276 |
T |
|
| Q |
668 |
attctccaaactacttgttcagcttcatccatactttcatgtcacatgcttcattccctcacttggttctctcccaactgattcaaaaacaatacttgaa |
767 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||| ||||||||||| || || || |
|
|
| T |
2019275 |
attctccaagctacttgttcagcttcatccatactttcatgtcacatgtttcattccctcaattgagtctctcccaaccgattcaaaaaccatcattcaa |
2019176 |
T |
|
| Q |
768 |
actcttccatcaaacatcagctgtacttttcttccaccagtgaactctaatgacctaccacaaggggttgctttagcccttcaacttcagctcacactaa |
867 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| |||||| ||| || ||| ||||||||||| ||||||||| |||||| ||||||||||| ||| |
|
|
| T |
2019175 |
actcttccatcaaacatcaactgtacttttcttccatcagtgagctccaaagacttaccacaagggattgctttagtacttcaaattcagctcacagtaa |
2019076 |
T |
|
| Q |
868 |
ctcactcactgccatctatacatcaggccttgaagtccttaactttaaggacaccctttgttgccttggtggttgatgcattagcaattgatgcactaga |
967 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
2019075 |
ttcactcactgccatctatacatcaggccttgaagtccttaactttaaggacaccctttgttgccttggtggttgattcattagcaatcgatgcactaga |
2018976 |
T |
|
| Q |
968 |
ttttgctaaggaattcaacttgttgtcctatg |
999 |
Q |
| |
|
||||||||| || |||||| |||||||||||| |
|
|
| T |
2018975 |
ttttgctaaagagttcaacatgttgtcctatg |
2018944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 590 - 833
Target Start/End: Complemental strand, 2005576 - 2005333
Alignment:
| Q |
590 |
acaaattttcatggagaaaacagttcatattgcagttgttcctggtgttggatatagccacttattcccaattcttcaattctccaaactacttgttcag |
689 |
Q |
| |
|
|||| ||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||| || || | ||||||||||||||||| ||||||||| |
|
|
| T |
2005576 |
acaagtttccatggagaaaacaattcatattgcagttgttccaggtgttggatatagccatttggtctctattcttcaattctccaagagacttgttcaa |
2005477 |
T |
|
| Q |
690 |
cttcatccatactttcatgtcacatgcttcattccctcacttggttctctcccaactgattcaaaaacaatacttgaaactcttccatcaaacatcagct |
789 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||||||||| |||| | ||||| ||||| | || ||| ||||||||||||||||||||| | |
|
|
| T |
2005476 |
cttcatccaaactttcatgtcacatgtttcattccctcacttggatctccctcaactaccacaaaatctatccttcaaactcttccatcaaacatcaacc |
2005377 |
T |
|
| Q |
790 |
gtacttttcttccaccagtgaactctaatgacctaccacaaggg |
833 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
2005376 |
atacttttcttccacctgtgaaccctaatgacctaccacaaggg |
2005333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 591 - 833
Target Start/End: Complemental strand, 2008955 - 2008713
Alignment:
| Q |
591 |
caaattttcatggagaaaacagttcatattgcagttgttcctggtgttggatatagccacttattcccaattcttcaattctccaaactacttgttcagc |
690 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| ||||||||||||||||| ||||||||||| |
|
|
| T |
2008955 |
caaatttccatggagaaaacagttcatattgcagttgttccaggtgttggatatagccatttggtccctattcttcaattctccaagagacttgttcagc |
2008856 |
T |
|
| Q |
691 |
ttcatccatactttcatgtcacatgcttcattccctcacttggttctctcccaactgattcaaaaacaatacttgaaactcttccatcaaacatcagctg |
790 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||| | ||||| |||| | ||| || ||||| | || ||| ||||||||||||||||||||| | |
|
|
| T |
2008855 |
ttcatccaaactttcatgtcacatgtttcattcccacgcttggatctccctcaaatgccacaaaatctatccttcaaactcttccatcaaacatcaacca |
2008756 |
T |
|
| Q |
791 |
tacttttcttccaccagtgaactctaatgacctaccacaaggg |
833 |
Q |
| |
|
|||||||||||||| |||||| | |||||||||||||||||| |
|
|
| T |
2008755 |
cacttttcttccacctgtgaaccccaatgacctaccacaaggg |
2008713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 591 - 833
Target Start/End: Original strand, 1968060 - 1968302
Alignment:
| Q |
591 |
caaattttcatggagaaaacagttcatattgcagttgttcctggtgttggatatagccacttattcccaattcttcaattctccaaactacttgttcagc |
690 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| || || |||| ||||||||||||||||| ||||||||| | |
|
|
| T |
1968060 |
caaatttccatggagaaaacagttcatattgcagttgttccaggtgttggatatagtcatttggtccctattcttcaattctccaagagacttgttcaac |
1968159 |
T |
|
| Q |
691 |
ttcatccatactttcatgtcacatgcttcattccctcacttggttctctcccaactgattcaaaaacaatacttgaaactcttccatcaaacatcagctg |
790 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||| ||||||| |||| | ||| || ||||| | || ||| ||||||||||||||||||||| | |
|
|
| T |
1968160 |
ttcatccagactttcatgtcacatgtttcattcccacacttggatctccctcaaatgccacaaaatctatccttcaaactcttccatcaaacatcaacca |
1968259 |
T |
|
| Q |
791 |
tacttttcttccaccagtgaactctaatgacctaccacaaggg |
833 |
Q |
| |
|
|||||||||||||| ||||| | |||||||||||||||||| |
|
|
| T |
1968260 |
cacttttcttccacctgtgaatcccaatgacctaccacaaggg |
1968302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 572 - 715
Target Start/End: Complemental strand, 2013522 - 2013378
Alignment:
| Q |
572 |
ataagctgtaaactaag-aacaaattttcatggagaaaacagttcatattgcagttgttcctggtgttggatatagccacttattcccaattcttcaatt |
670 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||||||| | ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
2013522 |
ataagctgtaaactaaacaacaaatttccatggagaaaaaaattcatattgcagttgttccaggtgttggatatagtcacttattcccaattcttcaatt |
2013423 |
T |
|
| Q |
671 |
ctccaaactacttgttcagcttcatccatactttcatgtcacatg |
715 |
Q |
| |
|
|| || |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2013422 |
ttcgaagctacttgttcagcttcatccatactttcatgtcacatg |
2013378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 596 - 781
Target Start/End: Complemental strand, 2012565 - 2012380
Alignment:
| Q |
596 |
tttcatggagaaaacagttcatattgcagttgttcctggtgttggatatagccacttattcccaattcttcaattctccaaactacttgttcagcttcat |
695 |
Q |
| |
|
||||||||| |||||| |||| ||||| |||||||| ||||| || ||| | |||||| |||| |||||||| ||||| || ||||| | ||||||||| |
|
|
| T |
2012565 |
tttcatggataaaacaattcacattgccgttgttccaggtgtcgggtatggacacttagtccctattcttcatttctcaaagttacttatccagcttcat |
2012466 |
T |
|
| Q |
696 |
ccatactttcatgtcacatgcttcattccctcacttggttctctcccaactgattcaaaaacaatacttgaaactcttccatcaaa |
781 |
Q |
| |
|
|| || ||||||||||||| |||||||| |||||||||||| ||||| | ||| |||| || ||| |||| ||||||||||| |
|
|
| T |
2012465 |
ccggacattcatgtcacatgtatcattcccacacttggttctcccccaagttcctcagaaaccatccttcaaacccttccatcaaa |
2012380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 910 - 998
Target Start/End: Complemental strand, 2012251 - 2012163
Alignment:
| Q |
910 |
ctttaaggacaccctttgttgccttggtggttgatgcattagcaattgatgcactagattttgctaaggaattcaacttgttgtcctat |
998 |
Q |
| |
|
||||||||| ||| |||| ||||||||||||||||| || || |||| |||||| | |||||||| ||||||||| ||||||||||| |
|
|
| T |
2012251 |
ctttaaggattccccttgtggccttggtggttgatgcttttgctgttgaagcactaaactttgctaaagaattcaacatgttgtcctat |
2012163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 593 - 672
Target Start/End: Original strand, 1964500 - 1964581
Alignment:
| Q |
593 |
aattttcatggagaaaacagttcatattgcagttgttcctggtgttgg--atatagccacttattcccaattcttcaattct |
672 |
Q |
| |
|
||||| |||||||||||| |||| |||||||||||||| |||||||| ||||| ||| ||| || | ||||||||||||| |
|
|
| T |
1964500 |
aatttccatggagaaaaccattcacattgcagttgttccaggtgttgggtatatatccatttagtctctattcttcaattct |
1964581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 82; Significance: 3e-38; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 590 - 999
Target Start/End: Original strand, 5901638 - 5902047
Alignment:
| Q |
590 |
acaaattttcatggagaaaacagttcatattgcagttgttcctggtgttggatatagccacttattcccaattcttcaattctccaaactacttgttcag |
689 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||| ||| |||| |||| | | |||||||| ||| || | |||||| |||||||||| |||||||||||| |
|
|
| T |
5901638 |
acaaattttcatggagaaaacaattcacattgctgttattccaggtgcttggtatagccatttagtctctattcttgaattctccaagctacttgttcag |
5901737 |
T |
|
| Q |
690 |
cttcatccatactttcatgtcacatgcttcattccctcacttggttctctcccaactgattcaaaaacaatacttgaaactcttccatcaaacatcagct |
789 |
Q |
| |
|
|| |||||| ||||||||||||| ||||||||||| ||||||| || | | ||| || ||||| || | ||| ||||||||||||||||||| ||| |
|
|
| T |
5901738 |
ctccatccagactttcatgtcacttgcttcattcctacacttggatcaccctcaagtgcctcaaagtcattccttcaaactcttccatcaaacattggct |
5901837 |
T |
|
| Q |
790 |
gtacttttcttccaccagtgaactctaatgacctaccacaaggggttgctttagcccttcaacttcagctcacactaactcactcactgccatctataca |
889 |
Q |
| |
|
|||||||||||||| ||||| | || |||||||| |||||| | | ||| ||| |||| ||| || || | | | ||||||| | |||| |
|
|
| T |
5901838 |
acacttttcttccacctgtgaatcccaacgacctacctcaagggactagtgtagaatgccaaattcatctcgcaacgacactcactctgccatatttaca |
5901937 |
T |
|
| Q |
890 |
tcaggccttgaagtccttaactttaaggacaccctttgttgccttggtggttgatgcattagcaattgatgcactagattttgctaaggaattcaacttg |
989 |
Q |
| |
|
|||||| ||||| ||||||||||||||||| ||| ||| || ||||||||||| | ||| | || ||||||||||| |||||||| |||||| || |
|
|
| T |
5901938 |
tcaggcattgaactccttaactttaaggactccccctgtggcactggtggttgattctttatctgccgaagcactagatttggctaaggagttcaacatg |
5902037 |
T |
|
| Q |
990 |
ttgtcctatg |
999 |
Q |
| |
|
|||||||||| |
|
|
| T |
5902038 |
ttgtcctatg |
5902047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 60; Significance: 5e-25; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 591 - 786
Target Start/End: Original strand, 18189425 - 18189620
Alignment:
| Q |
591 |
caaattttcatggagaaaacagttcatattgcagttgttcctggtgttggatatagccacttattcccaattcttcaattctccaaactacttgttcagc |
690 |
Q |
| |
|
||||||| |||||| |||||| |||| |||||||||||||| |||||||| ||| | |||||| |||| |||||||||||||| || ||||| | || | |
|
|
| T |
18189425 |
caaatttccatggataaaacaattcacattgcagttgttccaggtgttgggtatggacacttagtccctattcttcaattctcaaagttacttatccatc |
18189524 |
T |
|
| Q |
691 |
ttcatccatactttcatgtcacatgcttcattccctcacttggttctctcccaactgattcaaaaacaatacttgaaactcttccatcaaacatca |
786 |
Q |
| |
|
|||||||| || |||||| |||||| |||||| | |||||||||||| ||||| | ||| || | || ||| |||||||||||||||| |||| |
|
|
| T |
18189525 |
ttcatccagacattcatgccacatgtatcattcgcacacttggttctcccccaagttcctcagaacccatccttcaaactcttccatcaaatatca |
18189620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University