View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17494_low_3 (Length: 511)

Name: NF17494_low_3
Description: NF17494
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17494_low_3
NF17494_low_3
[»] chr1 (39 HSPs)
chr1 (168-321)||(5963242-5963395)
chr1 (385-511)||(5963052-5963178)
chr1 (16-126)||(5963391-5963501)
chr1 (439-511)||(5539815-5539887)
chr1 (436-511)||(18984593-18984668)
chr1 (439-505)||(8678540-8678606)
chr1 (438-511)||(4636445-4636518)
chr1 (442-511)||(33144393-33144462)
chr1 (436-511)||(52268286-52268361)
chr1 (441-511)||(2733431-2733501)
chr1 (441-511)||(8679015-8679085)
chr1 (441-511)||(18984120-18984190)
chr1 (441-511)||(50970752-50970822)
chr1 (441-510)||(5540293-5540362)
chr1 (443-511)||(15173099-15173167)
chr1 (441-505)||(39154500-39154564)
chr1 (436-511)||(15646669-15646744)
chr1 (448-511)||(33143925-33143988)
chr1 (441-504)||(50970279-50970342)
chr1 (441-511)||(9018974-9019044)
chr1 (441-511)||(15646193-15646263)
chr1 (441-511)||(29307416-29307486)
chr1 (441-511)||(29869621-29869691)
chr1 (441-511)||(29870093-29870163)
chr1 (437-507)||(47826961-47827031)
chr1 (442-511)||(17433689-17433758)
chr1 (442-511)||(21856044-21856113)
chr1 (441-511)||(5962579-5962649)
chr1 (441-511)||(15173568-15173637)
chr1 (441-511)||(17433217-17433287)
chr1 (441-511)||(21856517-21856587)
chr1 (441-511)||(26859060-26859130)
chr1 (441-511)||(29306954-29307024)
chr1 (442-511)||(39154021-39154090)
chr1 (441-511)||(9019437-9019507)
chr1 (441-511)||(26859533-26859603)
chr1 (442-511)||(52269222-52269291)
chr1 (441-510)||(17112283-17112351)
chr1 (448-511)||(47827062-47827125)
[»] chr8 (26 HSPs)
chr8 (436-511)||(44831243-44831318)
chr8 (441-511)||(9930131-9930201)
chr8 (441-511)||(41681135-41681205)
chr8 (440-511)||(31133694-31133765)
chr8 (441-511)||(13225113-13225183)
chr8 (441-511)||(19176291-19176361)
chr8 (441-511)||(19176764-19176834)
chr8 (441-511)||(41681608-41681678)
chr8 (441-505)||(11656456-11656520)
chr8 (441-505)||(34541028-34541092)
chr8 (441-511)||(11656931-11657001)
chr8 (441-511)||(12571864-12571934)
chr8 (441-511)||(33742923-33742993)
chr8 (441-510)||(11336997-11337066)
chr8 (443-511)||(9928912-9928980)
chr8 (441-505)||(31133221-31133285)
chr8 (443-511)||(33328161-33328229)
chr8 (441-511)||(4629798-4629868)
chr8 (441-511)||(9178109-9178179)
chr8 (441-511)||(44831719-44831789)
chr8 (444-511)||(13224645-13224711)
chr8 (441-511)||(8074025-8074095)
chr8 (443-511)||(12572325-12572393)
chr8 (443-510)||(4630261-4630328)
chr8 (442-505)||(33328620-33328683)
chr8 (441-473)||(9177668-9177700)
[»] chr3 (50 HSPs)
chr3 (438-511)||(51473426-51473499)
chr3 (441-511)||(25853235-25853305)
chr3 (443-511)||(25612451-25612519)
chr3 (441-511)||(20840561-20840631)
chr3 (441-511)||(31779126-31779196)
chr3 (441-511)||(32535437-32535507)
chr3 (441-511)||(37727404-37727474)
chr3 (441-511)||(39556051-39556121)
chr3 (441-505)||(24301036-24301100)
chr3 (441-505)||(30104483-30104547)
chr3 (441-511)||(5137455-5137525)
chr3 (441-511)||(17464492-17464562)
chr3 (441-511)||(23644463-23644533)
chr3 (441-511)||(23644939-23645009)
chr3 (441-511)||(27394051-27394121)
chr3 (441-511)||(39555579-39555649)
chr3 (441-511)||(43973914-43973984)
chr3 (443-511)||(5136983-5137051)
chr3 (443-511)||(32534962-32535030)
chr3 (441-511)||(4275838-4275908)
chr3 (441-511)||(20841035-20841105)
chr3 (441-511)||(29801890-29801960)
chr3 (441-511)||(31778654-31778724)
chr3 (441-511)||(37222045-37222115)
chr3 (435-511)||(27393656-27393732)
chr3 (443-511)||(41046703-41046771)
chr3 (441-511)||(26837830-26837899)
chr3 (441-511)||(29801357-29801427)
chr3 (441-511)||(30098237-30098307)
chr3 (441-511)||(48452990-48453060)
chr3 (441-505)||(23228487-23228551)
chr3 (441-505)||(51474814-51474878)
chr3 (443-502)||(26837363-26837422)
chr3 (441-511)||(43973442-43973512)
chr3 (441-511)||(50116883-50116953)
chr3 (441-505)||(37726930-37726994)
chr3 (441-505)||(45965939-45966003)
chr3 (444-511)||(22425287-22425354)
chr3 (443-510)||(24300560-24300626)
chr3 (441-511)||(17464966-17465036)
chr3 (441-511)||(32697174-32697244)
chr3 (442-510)||(25420616-25420684)
chr3 (443-511)||(26274570-26274638)
chr3 (443-510)||(41047173-41047239)
chr3 (441-511)||(22424815-22424885)
chr3 (441-511)||(25419145-25419215)
chr3 (442-511)||(25853701-25853770)
chr3 (443-488)||(32695706-32695751)
chr3 (441-510)||(37220558-37220627)
chr3 (441-493)||(40275094-40275146)
[»] chr7 (27 HSPs)
chr7 (441-511)||(38859115-38859185)
chr7 (441-511)||(2658840-2658910)
chr7 (441-511)||(19590526-19590596)
chr7 (441-511)||(32004615-32004685)
chr7 (441-511)||(32005088-32005158)
chr7 (441-511)||(19590999-19591069)
chr7 (441-511)||(35289375-35289445)
chr7 (443-511)||(19830423-19830491)
chr7 (443-511)||(29100325-29100393)
chr7 (441-505)||(37786768-37786832)
chr7 (441-511)||(28584396-28584466)
chr7 (441-511)||(35288904-35288974)
chr7 (441-510)||(34533792-34533861)
chr7 (441-505)||(19830899-19830963)
chr7 (441-505)||(28583440-28583504)
chr7 (443-510)||(4478175-4478242)
chr7 (441-511)||(23952731-23952802)
chr7 (441-504)||(37787248-37787311)
chr7 (441-511)||(2659314-2659384)
chr7 (441-511)||(38160952-38161022)
chr7 (441-511)||(38858644-38858714)
chr7 (443-501)||(4641443-4641501)
chr7 (453-511)||(29099863-29099921)
chr7 (441-511)||(34534265-34534335)
chr7 (443-511)||(4641918-4641983)
chr7 (436-495)||(34595263-34595322)
chr7 (446-511)||(23953203-23953268)
[»] chr6 (31 HSPs)
chr6 (441-511)||(23074000-23074070)
chr6 (441-511)||(12935158-12935228)
chr6 (441-511)||(20741101-20741171)
chr6 (441-511)||(22219827-22219897)
chr6 (441-511)||(1149466-1149536)
chr6 (441-511)||(11277056-11277126)
chr6 (441-511)||(11445461-11445531)
chr6 (441-511)||(18257138-18257208)
chr6 (441-511)||(23075602-23075672)
chr6 (442-511)||(29033436-29033505)
chr6 (443-511)||(10899942-10900010)
chr6 (443-511)||(18504922-18504990)
chr6 (441-511)||(1149906-1149976)
chr6 (441-511)||(2319673-2319743)
chr6 (441-511)||(10900404-10900474)
chr6 (441-511)||(18257611-18257681)
chr6 (441-511)||(20741578-20741648)
chr6 (441-511)||(28472638-28472708)
chr6 (441-511)||(29859827-29859897)
chr6 (441-510)||(11444988-11445057)
chr6 (441-505)||(15828121-15828185)
chr6 (439-511)||(31470790-31470862)
chr6 (436-511)||(31470311-31470386)
chr6 (441-511)||(12935631-12935701)
chr6 (442-511)||(29035111-29035180)
chr6 (441-505)||(15827639-15827703)
chr6 (441-505)||(18505399-18505463)
chr6 (441-510)||(4811373-4811442)
chr6 (443-511)||(2322692-2322760)
chr6 (443-511)||(3835200-3835268)
chr6 (441-496)||(22534214-22534269)
[»] chr5 (36 HSPs)
chr5 (441-511)||(19359137-19359207)
chr5 (443-510)||(16019062-16019129)
chr5 (441-511)||(2865229-2865299)
chr5 (441-511)||(5819403-5819473)
chr5 (441-511)||(16018590-16018660)
chr5 (441-511)||(18183443-18183513)
chr5 (441-511)||(19359610-19359680)
chr5 (443-511)||(5818932-5819000)
chr5 (443-511)||(15372347-15372415)
chr5 (441-511)||(8647439-8647509)
chr5 (441-511)||(8647912-8647982)
chr5 (441-510)||(24362311-24362380)
chr5 (441-505)||(7349497-7349561)
chr5 (436-511)||(8461405-8461480)
chr5 (436-511)||(29455216-29455291)
chr5 (441-511)||(7348560-7348630)
chr5 (441-511)||(24331560-24331630)
chr5 (441-511)||(25000563-25000633)
chr5 (441-502)||(164192-164253)
chr5 (443-511)||(18182973-18183041)
chr5 (442-505)||(2864756-2864819)
chr5 (436-511)||(29454736-29454811)
chr5 (441-511)||(4222196-4222266)
chr5 (441-511)||(8460931-8461001)
chr5 (441-511)||(14215717-14215787)
chr5 (441-511)||(15708972-15709042)
chr5 (441-511)||(4623149-4623219)
chr5 (442-511)||(14215243-14215312)
chr5 (442-511)||(15371873-15371941)
chr5 (441-511)||(164665-164735)
chr5 (441-511)||(4219664-4219734)
chr5 (441-511)||(14463994-14464064)
chr5 (438-511)||(6018312-6018385)
chr5 (446-511)||(24325218-24325283)
chr5 (446-511)||(24361843-24361908)
chr5 (442-501)||(24332047-24332107)
[»] chr4 (49 HSPs)
chr4 (441-511)||(46193406-46193476)
chr4 (442-511)||(46193879-46193948)
chr4 (441-505)||(33109944-33110008)
chr4 (441-511)||(12234330-12234400)
chr4 (441-511)||(15523236-15523306)
chr4 (441-511)||(23494917-23494987)
chr4 (441-511)||(25938145-25938215)
chr4 (441-505)||(51021275-51021339)
chr4 (442-505)||(2118295-2118358)
chr4 (441-511)||(11153621-11153691)
chr4 (441-511)||(22434180-22434250)
chr4 (441-511)||(25447248-25447318)
chr4 (441-511)||(25447710-25447780)
chr4 (441-510)||(11153147-11153216)
chr4 (441-505)||(10258367-10258431)
chr4 (443-511)||(54995541-54995609)
chr4 (441-511)||(20958333-20958403)
chr4 (441-511)||(25937671-25937741)
chr4 (441-511)||(45082898-45082968)
chr4 (441-511)||(51020798-51020868)
chr4 (442-507)||(4219559-4219624)
chr4 (441-510)||(16318251-16318320)
chr4 (442-511)||(18763994-18764063)
chr4 (442-511)||(23494445-23494514)
chr4 (442-511)||(38962293-38962362)
chr4 (438-511)||(44890515-44890588)
chr4 (443-511)||(4220033-4220101)
chr4 (441-505)||(15523714-15523778)
chr4 (441-511)||(12234803-12234873)
chr4 (441-511)||(20470985-20471055)
chr4 (443-504)||(22434657-22434718)
chr4 (442-511)||(33109686-33109755)
chr4 (443-511)||(18751602-18751670)
chr4 (441-505)||(35363081-35363145)
chr4 (443-511)||(48526655-48526723)
chr4 (443-511)||(54995072-54995140)
chr4 (441-494)||(48293595-48293648)
chr4 (441-505)||(22170417-22170480)
chr4 (441-505)||(48708296-48708360)
chr4 (441-511)||(44892622-44892692)
chr4 (441-511)||(48526197-48526267)
chr4 (458-511)||(43243754-43243807)
chr4 (443-505)||(2118775-2118837)
chr4 (441-511)||(55189529-55189599)
chr4 (458-511)||(43281264-43281317)
chr4 (436-493)||(55677451-55677508)
chr4 (441-493)||(19528870-19528922)
chr4 (443-511)||(45082435-45082502)
chr4 (441-505)||(48295023-48295087)
[»] chr2 (37 HSPs)
chr2 (443-511)||(40027614-40027682)
chr2 (441-511)||(239826-239896)
chr2 (441-511)||(1978583-1978653)
chr2 (441-511)||(22374799-22374869)
chr2 (441-511)||(11090994-11091064)
chr2 (441-511)||(18450831-18450901)
chr2 (441-511)||(18451305-18451375)
chr2 (441-511)||(20440505-20440575)
chr2 (441-511)||(20444750-20444820)
chr2 (441-511)||(22374321-22374391)
chr2 (441-511)||(26538553-26538623)
chr2 (441-511)||(28616614-28616684)
chr2 (443-511)||(8425834-8425902)
chr2 (443-511)||(11090524-11090592)
chr2 (436-511)||(26538093-26538168)
chr2 (436-511)||(40027136-40027211)
chr2 (442-505)||(40815347-40815410)
chr2 (441-511)||(1978109-1978179)
chr2 (441-511)||(7446343-7446413)
chr2 (441-511)||(28617088-28617158)
chr2 (441-511)||(35781137-35781207)
chr2 (441-511)||(43058806-43058876)
chr2 (443-507)||(14432145-14432209)
chr2 (443-511)||(40815819-40815887)
chr2 (441-511)||(239354-239423)
chr2 (441-511)||(35779709-35779779)
chr2 (446-511)||(3025472-3025537)
chr2 (441-505)||(3025942-3026005)
chr2 (443-511)||(8425358-8425426)
chr2 (441-505)||(28847175-28847239)
chr2 (441-511)||(7446820-7446890)
chr2 (441-511)||(43058334-43058404)
chr2 (442-511)||(8972239-8972308)
chr2 (442-511)||(15552528-15552596)
chr2 (442-510)||(14432616-14432684)
chr2 (442-505)||(15551501-15551564)
chr2 (441-493)||(42192241-42192293)
[»] scaffold0951 (2 HSPs)
scaffold0951 (441-511)||(1668-1738)
scaffold0951 (441-511)||(2141-2211)
[»] scaffold0295 (2 HSPs)
scaffold0295 (441-511)||(4794-4864)
scaffold0295 (442-510)||(5266-5334)
[»] scaffold0176 (2 HSPs)
scaffold0176 (441-511)||(19095-19165)
scaffold0176 (441-505)||(18836-18900)
[»] scaffold0417 (2 HSPs)
scaffold0417 (441-505)||(11103-11167)
scaffold0417 (459-511)||(10640-10692)
[»] scaffold1223 (2 HSPs)
scaffold1223 (441-511)||(1215-1285)
scaffold1223 (442-511)||(755-824)
[»] scaffold0273 (1 HSPs)
scaffold0273 (441-511)||(4681-4751)
[»] scaffold0057 (2 HSPs)
scaffold0057 (443-511)||(61932-62000)
scaffold0057 (441-511)||(61029-61099)
[»] scaffold0007 (3 HSPs)
scaffold0007 (443-511)||(64779-64847)
scaffold0007 (436-511)||(64298-64373)
scaffold0007 (436-496)||(210827-210887)
[»] scaffold1585 (1 HSPs)
scaffold1585 (440-511)||(567-638)
[»] scaffold0019 (1 HSPs)
scaffold0019 (441-503)||(134155-134217)
[»] scaffold0432 (2 HSPs)
scaffold0432 (443-511)||(9935-10003)
scaffold0432 (443-511)||(10346-10414)
[»] scaffold0113 (1 HSPs)
scaffold0113 (444-511)||(28717-28784)
[»] scaffold0076 (1 HSPs)
scaffold0076 (443-505)||(8489-8551)
[»] scaffold0027 (2 HSPs)
scaffold0027 (443-511)||(42172-42240)
scaffold0027 (441-511)||(42632-42702)


Alignment Details
Target: chr1 (Bit Score: 150; Significance: 4e-79; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 168 - 321
Target Start/End: Complemental strand, 5963395 - 5963242
Alignment:
Q  168 atcacaatcatgattattaatcaaaacttctgttctttcgctcaaattatgatacgtaggcctgtagatcgattatattgcaattacaaattgtaacctt 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  5963395 atcacaatcatgattattaatcaaaacttctgttctttcgctcaaattatgatacgtaggcctgtagatcgattatattgcaattacaaattgtaaactt 5963296  T
Q  268 tggtcctgttttatgtatttcaaattgtaaacatttatgttattggcaataaag 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5963295 tggtcctgttttatgtatttcaaattgtaaacatttatgttattggcaataaag 5963242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 385 - 511
Target Start/End: Complemental strand, 5963178 - 5963052
Alignment:
Q  385 catcgatctctttgttgttctttagttaagtgtggatgggttataataccgttaatgcttaattacacttttggtcctcatgttttggcctattcacgaa 484  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||| |||||||    
T  5963178 catcgatctctttgttgttctttagttaagtgtggatgggttataataccgttaaggtttaattacacttttggtcctcgtgttttggcctactcacgaa 5963079  T
Q  485 attggtcctgcccttttaaaatagaac 511  Q
    | || || |||||||||||||||||||    
T  5963078 actgatcatgcccttttaaaatagaac 5963052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 5963501 - 5963391
Alignment:
Q  16 caaatcacaggtgagaagatcatcacggaagaaggtcattactataaggtgtatttcgacactacatatgagacgatttgctacccttgtgatcggatcc 115  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5963501 caaatcactagtgagaagatcatcacggaagaaggtcattactataaggtgtatttcgacactacatatgagacgatttgctatccttgtgatcggatcc 5963402  T
Q  116 gagttcatcac 126  Q
    |||||||||||    
T  5963401 gagttcatcac 5963391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 439 - 511
Target Start/End: Original strand, 5539815 - 5539887
Alignment:
Q  439 atgcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||    
T  5539815 atgcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaac 5539887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 436 - 511
Target Start/End: Complemental strand, 18984668 - 18984593
Alignment:
Q  436 ttaatgcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||| ||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||| |||||    
T  18984668 ttaaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaac 18984593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 439 - 505
Target Start/End: Original strand, 8678540 - 8678606
Alignment:
Q  439 atgcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||    
T  8678540 atgcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaa 8678606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 438 - 511
Target Start/End: Complemental strand, 4636518 - 4636445
Alignment:
Q  438 aatgcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||| || |||||||||||||||| |||||    
T  4636518 aatgcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaac 4636445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 442 - 511
Target Start/End: Complemental strand, 33144462 - 33144393
Alignment:
Q  442 cttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||| |||||    
T  33144462 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaac 33144393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 436 - 511
Target Start/End: Original strand, 52268286 - 52268361
Alignment:
Q  436 ttaatgcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||| ||||||||||||||||||||||| | |||||||||  |||||||||||||||||||||||||||| |||||    
T  52268286 ttaaggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaac 52268361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 2733501 - 2733431
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||| ||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| |||||    
T  2733501 gcttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaac 2733431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 8679085 - 8679015
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| ||||| || ||||||||||||||||||| |||||    
T  8679085 gcttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaac 8679015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 18984120 - 18984190
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||| ||||||||||||||||||| |||||    
T  18984120 gcttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaac 18984190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 50970822 - 50970752
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| | |||||| ||||||||||||||||||| |||||    
T  50970822 gcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaac 50970752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 441 - 510
Target Start/End: Complemental strand, 5540362 - 5540293
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaa 510  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| |||||||| |||||||||| ||||    
T  5540362 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaa 5540293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 443 - 511
Target Start/End: Original strand, 15173099 - 15173167
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||| |||||||||||| |||||||| | |||||||||||||||||| ||||    
T  15173099 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaac 15173167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 441 - 505
Target Start/End: Complemental strand, 39154564 - 39154500
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||||||| |||||||||    
T  39154564 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaa 39154500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 436 - 511
Target Start/End: Complemental strand, 15646744 - 15646669
Alignment:
Q  436 ttaatgcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||| ||||||||||||||||||||||| |||||||||||| |||||||| || |||| ||||||||||| |||||    
T  15646744 ttaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaac 15646669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 448 - 511
Target Start/End: Original strand, 33143925 - 33143988
Alignment:
Q  448 tacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||| |||||    
T  33143925 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaac 33143988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 441 - 504
Target Start/End: Original strand, 50970279 - 50970342
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaa 504  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||||||| ||||||||    
T  50970279 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaa 50970342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 9018974 - 9019044
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| | |||||| |||| |||||||||||||| |||||    
T  9018974 gcttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaac 9019044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 15646193 - 15646263
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||| ||||||||||||| |||||||||||| |||||||| ||||| ||||||||||||| |||||    
T  15646193 gcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaac 15646263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 29307486 - 29307416
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||| |||||||||||||| ||||||| |||| |||||||| ||||||||||||||||||| |||||    
T  29307486 gcttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaac 29307416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 29869621 - 29869691
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| ||||||||| || |||||||| ||||| ||||||||||||| |||||    
T  29869621 gcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaac 29869691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 29870163 - 29870093
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| ||| |||| |||||||||| |||||||| |||||    
T  29870163 gcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaac 29870093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 437 - 507
Target Start/End: Original strand, 47826961 - 47827031
Alignment:
Q  437 taatgcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaata 507  Q
    |||| |||||||||||||||||||||| |||||||| ||| |||||||| ||||| |||||||||||||||    
T  47826961 taatacttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaata 47827031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 442 - 511
Target Start/End: Complemental strand, 17433758 - 17433689
Alignment:
Q  442 cttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||||||||| |||| ||||||| |||||||| ||||| ||||||||||||| |||||    
T  17433758 cttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaac 17433689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 442 - 511
Target Start/End: Original strand, 21856044 - 21856113
Alignment:
Q  442 cttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||||||||| |||||||  ||| |||||||| ||||||||||||||||||| |||||    
T  21856044 cttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaac 21856113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 5962579 - 5962649
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||| ||||||||||| |||| ||| |||||||||||| |||||| |||||||||||| |||||    
T  5962579 gcttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaac 5962649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 15173637 - 15173568
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||| |||||||| |||||||||| |||||    
T  15173637 gcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctg-ccttttaaaacagaac 15173568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 17433217 - 17433287
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||||||||||||||||||||||| ||| |||| ||  | ||||||||||||| |||||    
T  17433217 gcttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaac 17433287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 21856587 - 21856517
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| ||| |||| || ||||||| |||||||| |||||    
T  21856587 gcttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaac 21856517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 26859060 - 26859130
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||  |||||||||||| | |||||| |||||||||| |||||||| |||||    
T  26859060 gcttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaac 26859130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 29306954 - 29307024
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||| ||||| |||||||||||| |||||||| ||||| || |||||||||| |||||    
T  29306954 gcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaac 29307024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 442 - 511
Target Start/End: Original strand, 39154021 - 39154090
Alignment:
Q  442 cttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||| |||||||||||| || |||||||| || || ||||||||||||| |||||    
T  39154021 cttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaac 39154090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 9019507 - 9019437
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| ||||||| |||| |||| ||| |||| ||||| |||||||| |||||    
T  9019507 gcttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaac 9019437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 26859603 - 26859533
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||| ||||| |||||||| ||| |||||||| |  |||||||||||||||| |||||    
T  26859603 gcttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaac 26859533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 442 - 511
Target Start/End: Complemental strand, 52269291 - 52269222
Alignment:
Q  442 cttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||||||||| ||||||| | || ||| ||||| ||| |||||||||||||| |||||    
T  52269291 cttaattacacttttggtcctcgtgttttgacttactcatgaaatcggttctgcccttttaaaacagaac 52269222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 441 - 510
Target Start/End: Original strand, 17112283 - 17112351
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaa 510  Q
    ||||||||||||||||||| |||||||||||  ||| ||| |||||||||   |||||||||||||||||    
T  17112283 gcttaattacacttttggttctcatgttttgatctactcatgaaattggt-aggcccttttaaaatagaa 17112351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 511
Target Start/End: Complemental strand, 47827125 - 47827062
Alignment:
Q  448 tacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||| ||  | |||||||||||| |||||||| ||||| ||||||||||||| |||||    
T  47827125 tacacttttgatctccttgttttggcctactcacgaaaatggtcatgcccttttaaaacagaac 47827062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 9e-28; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 436 - 511
Target Start/End: Original strand, 44831243 - 44831318
Alignment:
Q  436 ttaatgcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  44831243 ttaaggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaac 44831318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 9930201 - 9930131
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| | |||||||||| |||||||| |||||||||||||||||||||||||    
T  9930201 gcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaac 9930131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 41681135 - 41681205
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||| |||||    
T  41681135 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaac 41681205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 440 - 511
Target Start/End: Complemental strand, 31133765 - 31133694
Alignment:
Q  440 tgcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||||||||||| |||||||||||| |||||||| || |||||||||||||||| |||||    
T  31133765 tgcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaac 31133694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 13225183 - 13225113
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||| ||||||||||||| |||||    
T  13225183 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaac 13225113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 19176291 - 19176361
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||| |||||    
T  19176291 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaac 19176361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 19176834 - 19176764
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| ||||| || ||||||||||||||||||| |||||    
T  19176834 gcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaac 19176764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 41681678 - 41681608
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||||| ||||||||||| |||||    
T  41681678 gcttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaac 41681608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 441 - 505
Target Start/End: Original strand, 11656456 - 11656520
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||| |||||||||||||    
T  11656456 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaa 11656520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 441 - 505
Target Start/End: Complemental strand, 34541092 - 34541028
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||||||| |||||||||    
T  34541092 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaa 34541028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 11657001 - 11656931
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| |||||| | |||||||||| |||||    
T  11657001 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaac 11656931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 12571864 - 12571934
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| |||| || ||||||||||| |||||    
T  12571864 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaac 12571934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 33742923 - 33742993
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| ||||||| |||| |||||||| ||||| ||||||||||||| |||||    
T  33742923 gcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaac 33742993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 441 - 510
Target Start/End: Complemental strand, 11337066 - 11336997
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaa 510  Q
    |||||||||||||||||||| || ||||||||| || ||||||||||||||| |||||||||||| ||||    
T  11337066 gcttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaa 11336997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 443 - 511
Target Start/End: Original strand, 9928912 - 9928980
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||| |||||||  ||| |||||||| ||||||||||||||||||| |||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaac 9928980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 441 - 505
Target Start/End: Original strand, 31133221 - 31133285
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    ||||||||||||||||||||||| ||||||| |||| |||||||| |||||| ||||||||||||    
T  31133221 gcttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaa 31133285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 443 - 511
Target Start/End: Original strand, 33328161 - 33328229
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||| |||||||||||| |||||||| || || ||||||||||||| |||||    
T  33328161 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaac 33328229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 4629798 - 4629868
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||| |||||||  | ||| ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  4629798 gcttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaac 4629868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 9178179 - 9178109
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| || || |||||| |||||| |||||    
T  9178179 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaac 9178109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 44831789 - 44831719
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||| ||||||||||||||| ||||||||| || |||||||| ||||||||| ||||||||| |||||    
T  44831789 gcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaac 44831719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 444 - 511
Target Start/End: Original strand, 13224645 - 13224711
Alignment:
Q  444 taattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||| || |||||||||||| |||||||| |||| |||||||||||||| |||||    
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggt-ctgcccttttaaaacagaac 13224711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 8074095 - 8074025
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||| ||| ||||||||||||| ||||||||||||||||||||| || || || |||||||||| |||||    
T  8074095 gcttagttatacttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaac 8074025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 511
Target Start/End: Complemental strand, 12572393 - 12572325
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||| |||||||| ||| |||||||| | ||| ||| ||||||||| |||||    
T  12572393 ttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaac 12572325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 443 - 510
Target Start/End: Complemental strand, 4630328 - 4630261
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaa 510  Q
    ||||||||||||||| || || |||||||| ||| ||||||||||||||||||  |||||||| ||||    
T  4630328 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaa 4630261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 505
Target Start/End: Complemental strand, 33328683 - 33328620
Alignment:
Q  442 cttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    |||||||| ||||||||||||| |||||| ||||| |||||||| | ||| ||| |||||||||    
T  33328683 cttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaa 33328620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 9177668 - 9177700
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggc 473  Q
    ||||||||||||||||||||||| |||||||||    
T  9177668 gcttaattacacttttggtcctcgtgttttggc 9177700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 438 - 511
Target Start/End: Original strand, 51473426 - 51473499
Alignment:
Q  438 aatgcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||    
T  51473426 aatgcttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaac 51473499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 25853235 - 25853305
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||    
T  25853235 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaac 25853305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 443 - 511
Target Start/End: Complemental strand, 25612519 - 25612451
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaac 25612451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 20840561 - 20840631
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| |||||||||| ||||||||||||||    
T  20840561 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaac 20840631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 31779196 - 31779126
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||| |||||    
T  31779196 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaac 31779126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 32535507 - 32535437
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||| |||||    
T  32535507 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaac 32535437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 37727474 - 37727404
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| |||||    
T  37727474 gcttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaac 37727404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 39556121 - 39556051
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||| |||||    
T  39556121 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaac 39556051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 441 - 505
Target Start/End: Complemental strand, 24301100 - 24301036
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||    
T  24301100 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaa 24301036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 441 - 505
Target Start/End: Original strand, 30104483 - 30104547
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    ||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||    
T  30104483 gcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaa 30104547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 5137525 - 5137455
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| ||| |||| |||| ||||||||||||||||||||    
T  5137525 gcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaac 5137455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 17464492 - 17464562
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||| ||||| ||||||||||||| |||||    
T  17464492 gcttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaac 17464562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 23644463 - 23644533
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| | |||||||||| ||||||||||||||||||| |||||||| |||||    
T  23644463 gcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaac 23644533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 23645009 - 23644939
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||| ||||||||||||| |||||||||||| |||||||||||||||| ||||||||||| |||||    
T  23645009 gcttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaac 23644939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 27394121 - 27394051
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||| |||||||| |||||    
T  27394121 gcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaac 27394051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 39555579 - 39555649
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| |||||||||| |||||||| |||||    
T  39555579 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaac 39555649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 43973984 - 43973914
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| |||| |||||||||||||| |||||    
T  43973984 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaac 43973914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 443 - 511
Target Start/End: Original strand, 5136983 - 5137051
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||| |||||||||| | |||||||||||||| ||||||||||||| |||||    
T  5136983 ttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaac 5137051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 443 - 511
Target Start/End: Original strand, 32534962 - 32535030
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||| ||||||||| || ||||||||||||||||||| |||||||| |||||    
T  32534962 ttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaac 32535030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 4275908 - 4275838
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||| ||| ||||||||| |||||    
T  4275908 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaac 4275838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 20841105 - 20841035
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||| ||| |||||||||||| |||||||| |||||||||| |||||||| |||||    
T  20841105 gcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaac 20841035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 29801960 - 29801890
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||| ||||| | |||||||||| |||||||| ||||||||||||||||||| |||||    
T  29801960 gcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaac 29801890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 31778654 - 31778724
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||| ||| ||| |||| ||||||||||||||||||| |||||    
T  31778654 gcttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaac 31778724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 37222115 - 37222045
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| ||||||| |||| |||| |||||||||||||| |||||||| |||||    
T  37222115 gcttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaac 37222045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 435 - 511
Target Start/End: Original strand, 27393656 - 27393732
Alignment:
Q  435 gttaatgcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||| ||||||||||||||||||||||| ||||||| |||| |||| ||| |||||||||| |||||||| |||||    
T  27393656 gttaaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaac 27393732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 443 - 511
Target Start/End: Original strand, 41046703 - 41046771
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||| |||||||||||| | |||||| ||||| ||||||||||||| |||||    
T  41046703 ttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaac 41046771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 26837899 - 26837830
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| | |||||| |||| |||||| |||||||||||||    
T  26837899 gcttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgccc-tttaaaatagaac 26837830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 29801357 - 29801427
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||||||| || ||||||||| || |||| ||| ||||||||||||||||||| |||||    
T  29801357 gcttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaac 29801427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 30098307 - 30098237
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| ||||||| | || |||||||| ||||| ||||||||||||| |||||    
T  30098307 gcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaac 30098237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 48452990 - 48453060
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||| ||||||||||||||| || |||||||||||| |||||||| |||||||||| |||||||| |||||    
T  48452990 gcttgattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaac 48453060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 441 - 505
Target Start/End: Complemental strand, 23228551 - 23228487
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    ||||||||||||||||||||| | |||||||||||| |||||||| || || |||||||||||||    
T  23228551 gcttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaa 23228487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 441 - 505
Target Start/End: Complemental strand, 51474878 - 51474814
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    ||||||||||||||||||| | | ||||||||| || |||||||||||||| |||||||||||||    
T  51474878 gcttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaa 51474814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 443 - 502
Target Start/End: Original strand, 26837363 - 26837422
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgccctttta 502  Q
    ||||||||| ||||||||||  | |||||||||| |||||||||||||||||||||||||    
T  26837363 ttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgccctttta 26837422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 43973442 - 43973512
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| ||||||| |||| |||||||| || |  ||||||||||||| |||||    
T  43973442 gcttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaac 43973512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 50116953 - 50116883
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||| ||||| ||||||| | || |||||||||||||| ||||||||| ||| |||||    
T  50116953 gcttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaac 50116883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 441 - 505
Target Start/End: Original strand, 37726930 - 37726994
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    ||||||||||||||||||||||| |||||||| ||  | |||||| |||| ||||||||||||||    
T  37726930 gcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaa 37726994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 441 - 505
Target Start/End: Original strand, 45965939 - 45966003
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    ||||||||||||||||||||||| ||||||||| || ||||||| ||  |||||| |||||||||    
T  45965939 gcttaattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaa 45966003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 511
Target Start/End: Complemental strand, 22425354 - 22425287
Alignment:
Q  444 taattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||||||| ||||| |||||| |||||||  ||||| ||||||| ||||| |||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaac 22425287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 443 - 510
Target Start/End: Original strand, 24300560 - 24300626
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaa 510  Q
    ||||||||| |||||||| || ||||||||| ||||||||||| |||||||| |||||||||| ||||    
T  24300560 ttaattacatttttggtc-tcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaa 24300626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 17465036 - 17464966
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||| ||||||||||| ||||||||||||  || |||| |||||   |||||||||||||||||    
T  17465036 gcttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaac 17464966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 32697244 - 32697174
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||| | ||||||||||| |||||| ||||| |||||||||| |||  |||||||||||| |||||    
T  32697244 gcttaattatatttttggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaac 32697174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 510
Target Start/End: Complemental strand, 25420684 - 25420616
Alignment:
Q  442 cttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaa 510  Q
    |||||||||||||||| || || | ||||| |||| ||||||||||| ||  |||||||||||||||||    
T  25420684 cttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaa 25420616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 511
Target Start/End: Original strand, 26274570 - 26274638
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||| ||||| ||||  | |||||| ||| |||||||| ||||||||||||||||||| |||||    
T  26274570 ttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaac 26274638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 510
Target Start/End: Complemental strand, 41047239 - 41047173
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaa 510  Q
    ||||||||||||| | || ||||||||||||||| |||||||| |||| ||| |||||||||| ||||    
T  41047239 ttaattacactttcg-tcttcatgttttggcctactcacgaaactggttctgtccttttaaaacagaa 41047173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 22424815 - 22424885
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||| ||| |||||  ||||| | |||||| |||| ||| |||||||||| |||||    
T  22424815 gcttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaac 22424885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 25419145 - 25419215
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||| |||| |||||||||| || |||||| || || |||||||||| || |||||||||||||| |||||    
T  25419145 gcttgattatacttttggtcttcgtgttttagcttactcacgaaattagttctgcccttttaaaacagaac 25419215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 511
Target Start/End: Complemental strand, 25853770 - 25853701
Alignment:
Q  442 cttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||| ||||| |||||||  ||| |||||||| ||||| || | |||||||| |||||    
T  25853770 cttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaac 25853701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 488
Target Start/End: Original strand, 32695706 - 32695751
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattg 488  Q
    ||||||||| ||||||||||||| |||||||||| | |||||||||    
T  32695706 ttaattacatttttggtcctcatattttggcctacttacgaaattg 32695751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 510
Target Start/End: Original strand, 37220558 - 37220627
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaa 510  Q
    ||||||||||||||||||||||| | |||||||||| |||| | || | || ||| ||||||||| ||||    
T  37220558 gcttaattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaa 37220627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 493
Target Start/End: Original strand, 40275094 - 40275146
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcct 493  Q
    ||||||||||||||||||||||||  ||||| || | |||||||| |||||||    
T  40275094 gcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcct 40275146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 9e-25; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 38859185 - 38859115
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||    
T  38859185 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaac 38859115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 2658840 - 2658910
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||| |||||| |||||||||||| |||||||| |||||||||||||||||||||||||    
T  2658840 gcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaac 2658910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 19590526 - 19590596
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||| |||||    
T  19590526 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaac 19590596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 32004615 - 32004685
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||| |||||    
T  32004615 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaac 32004685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 32005158 - 32005088
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||||||||||||| || |||||||| ||||| |||||||||||||||||||    
T  32005158 gcttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaac 32005088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 19591069 - 19590999
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||| ||| |||||||||||| |||||||| ||||||||||||||||||| |||||    
T  19591069 gcttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaac 19590999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 35289445 - 35289375
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||| ||||| |||||||||||| |||||||| ||||||||||||||||||| |||||    
T  35289445 gcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaac 35289375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 443 - 511
Target Start/End: Original strand, 19830423 - 19830491
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||| |||||||||||| |||||||| ||||| ||||||||||||| |||||    
T  19830423 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaac 19830491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 443 - 511
Target Start/End: Complemental strand, 29100393 - 29100325
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||| |||||||| ||| |||| ||||||||||||||||||||||| |||||    
T  29100393 ttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaac 29100325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 441 - 505
Target Start/End: Original strand, 37786768 - 37786832
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    ||||||||||||||||||||||| |||||||||||| | |||||| |||||||||||||||||||    
T  37786768 gcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaa 37786832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 28584466 - 28584396
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||| |||||| || |||||||||||||||||||||||| || |||||||||| |||||    
T  28584466 gcttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaac 28584396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 35288904 - 35288974
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||||||| || | |||||||||| |||||||| ||||||||||||||||||| |||||    
T  35288904 gcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaac 35288974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 441 - 510
Target Start/End: Original strand, 34533792 - 34533861
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaa 510  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||| ||| ||||||||| ||||    
T  34533792 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaa 34533861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 441 - 505
Target Start/End: Complemental strand, 19830963 - 19830899
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||| |||||||| ||||||||||    
T  19830963 gcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaa 19830899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 441 - 505
Target Start/End: Original strand, 28583440 - 28583504
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    ||||||||||||||||||||||| |||||||||||| ||| || |||||| ||||||||||||||    
T  28583440 gcttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaa 28583504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 443 - 510
Target Start/End: Complemental strand, 4478242 - 4478175
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaa 510  Q
    |||| |||||||||| ||||| |||||||||||| |||||||| ||||||||||||||||||| ||||    
T  4478242 ttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaa 4478175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 23952731 - 23952802
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttg-gcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||  |||| |||||||||||||| ||||||||||||| |||||    
T  23952731 gcttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaac 23952802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 441 - 504
Target Start/End: Complemental strand, 37787311 - 37787248
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaa 504  Q
    ||||||||| ||||||||||||| |||||||||||| |||||||| ||||||||| ||||||||    
T  37787311 gcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaa 37787248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 2659384 - 2659314
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||| |||||||||||  ||||||||||||||| |||| ||||| ||||||||||||| |||||    
T  2659384 gcttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaac 2659314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 38160952 - 38161022
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||||||||||  ||||||||||| |||||||| |  |||||||||||||||| |||||    
T  38160952 gcttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaac 38161022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 38858644 - 38858714
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||| ||||||||||||||| ||||||||| || |||||||| ||||||||| ||||||||| |||||    
T  38858644 gcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaac 38858714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 443 - 501
Target Start/End: Original strand, 4641443 - 4641501
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgccctttt 501  Q
    ||||||||||||||||||||| ||||||||| || |||||||| ||||||||| |||||    
T  4641443 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctctttt 4641501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 453 - 511
Target Start/End: Original strand, 29099863 - 29099921
Alignment:
Q  453 ttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||| |||||||||||| |||||||| || |||||||||||||||| |||||    
T  29099863 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaac 29099921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 34534335 - 34534265
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||| ||||||||| ||| |||||||||||| |||||||| || |||||||| ||||||| |||||    
T  34534335 gcttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaac 34534265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 511
Target Start/End: Complemental strand, 4641983 - 4641918
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||| |||||||||||| ||||   | |||||||| |||||||||| |||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaac 4641918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 495
Target Start/End: Complemental strand, 34595322 - 34595263
Alignment:
Q  436 ttaatgcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgc 495  Q
    |||| ||||||||||||||||||||||||  ||||| || | |||||||| |||||||||    
T  34595322 ttaaggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctgc 34595263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 511
Target Start/End: Complemental strand, 23953268 - 23953203
Alignment:
Q  446 attacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||| ||||||||||| |||||||  ||| |||||||| |||||| ||||||| |||| |||||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaac 23953203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 9e-25; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 23074000 - 23074070
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||    
T  23074000 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaac 23074070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 12935158 - 12935228
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||| |||||    
T  12935158 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaac 12935228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 20741101 - 20741171
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||| |||||    
T  20741101 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaac 20741171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 22219897 - 22219827
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||| |||||    
T  22219897 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaac 22219827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 1149466 - 1149536
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||| ||||| |||||||||||| |||||||| ||||||||||||||||||| |||||    
T  1149466 gcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaac 1149536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 11277126 - 11277056
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| ||||||||| || |||||||| ||||||||||||||||||| |||||    
T  11277126 gcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaac 11277056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 11445531 - 11445461
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| |||||||||| |||||||| |||||    
T  11445531 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaac 11445461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 18257138 - 18257208
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| ||||||||| || |||||||| ||||||||||||||||||| |||||    
T  18257138 gcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaac 18257208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 23075672 - 23075602
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||| ||||||||||||| |||||    
T  23075672 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaac 23075602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 442 - 511
Target Start/End: Original strand, 29033436 - 29033505
Alignment:
Q  442 cttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||||||||| | |||||||||  |||||||||||||||||||||||||||| |||||    
T  29033436 cttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaac 29033505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 443 - 511
Target Start/End: Original strand, 10899942 - 10900010
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||||| || |||||||||||| |||||||| ||||||||||||||||||| |||||    
T  10899942 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaac 10900010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 443 - 511
Target Start/End: Original strand, 18504922 - 18504990
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||| |||||||||||| |||||||| |||||||||| |||||||| |||||    
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaac 18504990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 1149976 - 1149906
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||| ||||| ||| |||| ||||| |||||||||||||||||||    
T  1149976 gcttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaac 1149906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 2319673 - 2319743
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||| ||||||||||| |||||||||||| |||||||| ||||| ||||||||||||| |||||    
T  2319673 gcttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaac 2319743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 10900474 - 10900404
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| | |||||||||| |||||||| ||||| ||||||||||||| |||||    
T  10900474 gcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaac 10900404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 18257681 - 18257611
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||| ||||||||||||| ||||||| |||| |||||||| ||||||||||||||||||| |||||    
T  18257681 gcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaac 18257611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 20741648 - 20741578
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||| || |||||||||||||||| |||||    
T  20741648 gcttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaac 20741578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 28472638 - 28472708
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||| | |||||||| |||||||||| |||||||| |||||    
T  28472638 gcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaac 28472708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 29859827 - 29859897
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||| | |||||||| |||||||||| |||||||| |||||    
T  29859827 gcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaac 29859897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 441 - 510
Target Start/End: Original strand, 11444988 - 11445057
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaa 510  Q
    ||||||||||||||||||||||| |||||||||||| |||||||  ||||||||||| ||||||| ||||    
T  11444988 gcttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaa 11445057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 441 - 505
Target Start/End: Complemental strand, 15828185 - 15828121
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||| | |||||||||||    
T  15828185 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaa 15828121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 439 - 511
Target Start/End: Complemental strand, 31470862 - 31470790
Alignment:
Q  439 atgcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||||  |||||| ||||| |||||||| |||| |||||||||||||| |||||    
T  31470862 atgcttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaac 31470790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 436 - 511
Target Start/End: Original strand, 31470311 - 31470386
Alignment:
Q  436 ttaatgcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||| ||||||||||||||||| ||||| |||||||||||| |||||||| ||||| ||| ||||||||| |||||    
T  31470311 ttaaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaac 31470386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 12935701 - 12935631
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| ||||||||| || |||||||| |||||||||| || ||||| |||||    
T  12935701 gcttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaac 12935631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 442 - 511
Target Start/End: Complemental strand, 29035180 - 29035111
Alignment:
Q  442 cttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||| |||||| |||||| ||||| |||||||||||||  ||||||||||||| |||||    
T  29035180 cttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaac 29035111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 441 - 505
Target Start/End: Original strand, 15827639 - 15827703
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    ||||||||||||||||||||||| ||||||||| || |||||||| |||| ||| ||||||||||    
T  15827639 gcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaa 15827703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 441 - 505
Target Start/End: Complemental strand, 18505463 - 18505399
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    ||||||||| ||||||||||||| |||||||| ||| |||||||| || ||||||||||||||||    
T  18505463 gcttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaa 18505399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 441 - 510
Target Start/End: Original strand, 4811373 - 4811442
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaa 510  Q
    |||||||||||||||||||||   | |||||| ||| |||||||| ||||| ||||||||||||||||||    
T  4811373 gcttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaa 4811442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 511
Target Start/End: Complemental strand, 2322760 - 2322692
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||||| || |||||||| ||| |||||||| | ||| |||| |||||||| |||||    
T  2322760 ttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaac 2322692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 511
Target Start/End: Complemental strand, 3835268 - 3835200
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||||||   ||||||| |||| |||||||| ||||||||||  ||||||| |||||    
T  3835268 ttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaac 3835200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 441 - 496
Target Start/End: Complemental strand, 22534269 - 22534214
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcc 496  Q
    ||||||||||||||||||||||| | ||||| || | |||||||| ||||||||||    
T  22534269 gcttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtcctgcc 22534214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 9e-25; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 19359137 - 19359207
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||    
T  19359137 gcttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaac 19359207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 443 - 510
Target Start/End: Complemental strand, 16019129 - 16019062
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaa 510  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||    
T  16019129 ttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaa 16019062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 2865299 - 2865229
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||| |||||    
T  2865299 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaac 2865229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 5819473 - 5819403
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||| |||||    
T  5819473 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaac 5819403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 16018590 - 16018660
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||||||| || |||||||||||||||||||||||| || |||||||||||||||||||    
T  16018590 gcttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaac 16018660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 18183513 - 18183443
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||| |||||    
T  18183513 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaac 18183443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 19359680 - 19359610
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||| |||||    
T  19359680 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaac 19359610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 443 - 511
Target Start/End: Original strand, 5818932 - 5819000
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||| |||||    
T  5818932 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaac 5819000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 443 - 511
Target Start/End: Complemental strand, 15372415 - 15372347
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||| |||||    
T  15372415 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaac 15372347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 8647439 - 8647509
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| |||||||||| |||||||| |||||    
T  8647439 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaac 8647509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 8647982 - 8647912
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| || |||||||||||||||| |||||    
T  8647982 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaac 8647912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 441 - 510
Target Start/End: Complemental strand, 24362380 - 24362311
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaa 510  Q
    ||||||||||||||||||||||| | |||||||||| |||||||| ||||||||||||||||||| ||||    
T  24362380 gcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaa 24362311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 441 - 505
Target Start/End: Complemental strand, 7349561 - 7349497
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||||||||||||| |||||||||    
T  7349561 gcttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaa 7349497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 436 - 511
Target Start/End: Complemental strand, 8461480 - 8461405
Alignment:
Q  436 ttaatgcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||| ||||||||||||||||||||||| |||||||||||| |||||||| || |||||| ||||||||| |||||    
T  8461480 ttaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaac 8461405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 436 - 511
Target Start/End: Complemental strand, 29455291 - 29455216
Alignment:
Q  436 ttaatgcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||| |||||||||||| |||||||||| |||||||| ||| |||||||| ||||||||||||||||||| |||||    
T  29455291 ttaaggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaac 29455216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 7348560 - 7348630
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||| |||||||||||||||||| | ||| |||||||||||||| ||||||||||||| |||||    
T  7348560 gcttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaac 7348630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 24331560 - 24331630
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||  ||| |||||||| ||||||||||||||||||| |||||    
T  24331560 gcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaac 24331630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 25000633 - 25000563
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||| ||  ||||||||| |||||    
T  25000633 gcttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaac 25000563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 441 - 502
Target Start/End: Original strand, 164192 - 164253
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgccctttta 502  Q
    ||||||||||||||||||||||| ||||||| |||| |||||||| ||||||||||||||||    
T  164192 gcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgccctttta 164253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 443 - 511
Target Start/End: Original strand, 18182973 - 18183041
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||||| || |||||||||||| |||||||| ||||| ||||||||||||| |||||    
T  18182973 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaac 18183041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 442 - 505
Target Start/End: Original strand, 2864756 - 2864819
Alignment:
Q  442 cttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    |||||||||||||||||||||  |||||||||||| ||||||||||| || |||||||||||||    
T  2864756 cttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaa 2864819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 436 - 511
Target Start/End: Original strand, 29454736 - 29454811
Alignment:
Q  436 ttaatgcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||| |||||||| ||||||||||| |  |||||||||||| |||||||||||||| ||||||||||||| |||||    
T  29454736 ttaaggcttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaac 29454811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 4222266 - 4222196
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||| ||  |||||||| ||||| ||||||||||||| |||||    
T  4222266 gcttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaac 4222196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 8460931 - 8461001
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||| ||||||||||| || | |||||||||| |||||||| ||||||||||||||||||| |||||    
T  8460931 gcttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaac 8461001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 14215787 - 14215717
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||| ||||||||||| ||||||| |||| |||||||| || |||||||||||||||| |||||    
T  14215787 gcttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaac 14215717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 15708972 - 15709042
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||  |||||||||||| |||||||| ||||  ||||||||||||| |||||    
T  15708972 gcttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaac 15709042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 4623149 - 4623219
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||||||| || ||||||| | || |||||||||||||||||||  ||||||| |||||    
T  4623149 gcttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaac 4623219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 442 - 511
Target Start/End: Original strand, 14215243 - 14215312
Alignment:
Q  442 cttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||||||||| ||||||||| || |||||||| ||||  | ||||||||||| |||||    
T  14215243 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaac 14215312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 442 - 511
Target Start/End: Original strand, 15371873 - 15371941
Alignment:
Q  442 cttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||| ||||| | |||||| ||| ||||||| |||||||||||||||||||| |||||    
T  15371873 cttaattacacttttgatcctcgtattttggtctactcacgaa-ttggtcctgcccttttaaaacagaac 15371941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 164735 - 164665
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||| | ||||| |||||||||||||||| | |||| ||| ||||| ||||||||||||| |||||    
T  164735 gcttaattataattttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaac 164665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 4219664 - 4219734
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||| ||||| |||||||| ||||| || ||| ||||| |||| |||||||| |||||    
T  4219664 gcttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaac 4219734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 14464064 - 14463994
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||| |||||| |||||||||||| |||||||| |  |  || ||||||||||||||||    
T  14464064 gcttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaac 14463994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 438 - 511
Target Start/End: Original strand, 6018312 - 6018385
Alignment:
Q  438 aatgcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||| ||||||| ||| |||||||  ||| |||||||| ||||| || |||||||||| |||||    
T  6018312 aatgcttaattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaac 6018385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 446 - 511
Target Start/End: Original strand, 24325218 - 24325283
Alignment:
Q  446 attacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||| ||||||||||||||  ||||||| || || ||||||| ||||| |||||    
T  24325218 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaac 24325283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 446 - 511
Target Start/End: Original strand, 24361843 - 24361908
Alignment:
Q  446 attacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||| ||||||||||||||  ||||||| || || ||||||| ||||| |||||    
T  24361843 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaac 24361908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 501
Target Start/End: Complemental strand, 24332107 - 24332047
Alignment:
Q  442 cttaattacactttt-ggtcctcatgttttggcctattcacgaaattggtcctgccctttt 501  Q
    ||||||||||||||| |||| |||||||||||| || |||||||| || ||||||| ||||    
T  24332107 cttaattacactttttggtcatcatgttttggcatactcacgaaactgatcctgccttttt 24332047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 9e-25; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 46193406 - 46193476
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||    
T  46193406 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaac 46193476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 442 - 511
Target Start/End: Complemental strand, 46193948 - 46193879
Alignment:
Q  442 cttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||    
T  46193948 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaac 46193879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 441 - 505
Target Start/End: Complemental strand, 33110008 - 33109944
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  33110008 gcttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaa 33109944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 12234330 - 12234400
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  12234330 gcttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaac 12234400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 15523236 - 15523306
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||| |||||    
T  15523236 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaac 15523306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 23494987 - 23494917
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||| |||||    
T  23494987 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaac 23494917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 25938215 - 25938145
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||| |||||    
T  25938215 gcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaac 25938145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 441 - 505
Target Start/End: Complemental strand, 51021339 - 51021275
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    ||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||    
T  51021339 gcttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaa 51021275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 442 - 505
Target Start/End: Original strand, 2118295 - 2118358
Alignment:
Q  442 cttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    |||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||    
T  2118295 cttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaa 2118358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 11153691 - 11153621
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| |||||||||| |||||||| |||||    
T  11153691 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaac 11153621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 22434180 - 22434250
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| ||||||||| || |||||||| ||||||||||||||||||| |||||    
T  22434180 gcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaac 22434250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 25447248 - 25447318
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| ||| |||| ||||||||||||||||||| |||||    
T  25447248 gcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaac 25447318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 25447780 - 25447710
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||||||| || |||||||||||| |||||||| ||||||||||||||||||| |||||    
T  25447780 gcttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaac 25447710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 441 - 510
Target Start/End: Original strand, 11153147 - 11153216
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaa 510  Q
    ||||||||| ||||||||||||| |||||||||||| |||| ||||||||| ||||||||||||||||||    
T  11153147 gcttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaa 11153216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 441 - 505
Target Start/End: Complemental strand, 10258431 - 10258367
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    ||||||||||||||||||||||| |||| ||||||| ||| ||||||||||||||||||||||||    
T  10258431 gcttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaa 10258367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 443 - 511
Target Start/End: Complemental strand, 54995609 - 54995541
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||| |||||||||||| |||||||| || || |||||||||||||||||||    
T  54995609 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaac 54995541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 20958403 - 20958333
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||| |||||| | |||||||||| |||||||| ||||||||||||||||||| |||||    
T  20958403 gcttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaac 20958333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 25937671 - 25937741
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||| ||||||||||| |||||| ||||| |||||||| ||||||||||||||||||| |||||    
T  25937671 gcttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaac 25937741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 45082968 - 45082898
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| ||||||||| || |||||||| ||||| ||||||||||||| |||||    
T  45082968 gcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaac 45082898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 51020798 - 51020868
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||| |||||||||||||||  |||||| ||| ||||||||||||||||||| |||||    
T  51020798 gcttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaac 51020868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 442 - 507
Target Start/End: Original strand, 4219559 - 4219624
Alignment:
Q  442 cttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaata 507  Q
    |||||||||| ||||||||||| |||||||||||| |||||||| |||||||||| ||||||||||    
T  4219559 cttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaata 4219624  T

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Target: chr4; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 441 - 510
Target Start/End: Complemental strand, 16318320 - 16318251
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaa 510  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||| || |||||||||||||||| ||||    
T  16318320 gcttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaacagaa 16318251  T

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Target: chr4; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 442 - 511
Target Start/End: Complemental strand, 18764063 - 18763994
Alignment:
Q  442 cttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||||||||| |||||||||||| |||||||| ||||| || |||||||||| |||||    
T  18764063 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaac 18763994  T

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Target: chr4; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 442 - 511
Target Start/End: Original strand, 23494445 - 23494514
Alignment:
Q  442 cttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||| ||||||||||| |||||||||||| |||||||| | ||||||||||||||||| |||||    
T  23494445 cttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaac 23494514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 442 - 511
Target Start/End: Complemental strand, 38962362 - 38962293
Alignment:
Q  442 cttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||| ||||||||||| |||||||| |||||||||||| |||||| |||||||||||| |||||    
T  38962362 cttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaac 38962293  T

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Target: chr4; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 438 - 511
Target Start/End: Original strand, 44890515 - 44890588
Alignment:
Q  438 aatgcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||| ||||||||||  ||||||| ||||||||||||| ||||| ||||||||||||| |||||    
T  44890515 aatgcttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaac 44890588  T

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Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 443 - 511
Target Start/End: Complemental strand, 4220101 - 4220033
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||| |||||||||||| |||||||| || |||||| ||||||||| |||||    
T  4220101 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaac 4220033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 441 - 505
Target Start/End: Complemental strand, 15523778 - 15523714
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    |||||||||||||||||||| || |||||||| ||| |||||||| |||||||||||||||||||    
T  15523778 gcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaa 15523714  T

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Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 12234873 - 12234803
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||| ||||||||||||| |||||||||||| |||||||| || || ||||||||||||| |||||    
T  12234873 gcttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaac 12234803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 20471055 - 20470985
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| | |||||| ||||| | ||||||||||| |||||    
T  20471055 gcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaac 20470985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 443 - 504
Target Start/End: Complemental strand, 22434718 - 22434657
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaa 504  Q
    ||||||||| ||||||||||| |||||||||||| |||||||| |||||||||| |||||||    
T  22434718 ttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaa 22434657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 442 - 511
Target Start/End: Original strand, 33109686 - 33109755
Alignment:
Q  442 cttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||| ||||||||||| ||||||||| || |||||||| ||||||||| ||||||||| |||||    
T  33109686 cttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaac 33109755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 443 - 511
Target Start/End: Original strand, 18751602 - 18751670
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||| |||||||||||| |||  ||| ||||| ||||||||||||| |||||    
T  18751602 ttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaac 18751670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 441 - 505
Target Start/End: Complemental strand, 35363145 - 35363081
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    ||||||||||||||||| ||||| |||||||||||| |||||||| |||| |||| |||||||||    
T  35363145 gcttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaa 35363081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 443 - 511
Target Start/End: Complemental strand, 48526723 - 48526655
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||| ||||||||||||| |||||||| ||| |||||||| ||||| ||||||||||||| |||||    
T  48526723 ttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaac 48526655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 443 - 511
Target Start/End: Original strand, 54995072 - 54995140
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||| ||| |||||||| |||||||| | ||||| ||||||||||| |||||    
T  54995072 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaac 54995140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 441 - 494
Target Start/End: Original strand, 48293595 - 48293648
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctg 494  Q
    ||||||||||||||||||||||| ||||||||| || ||||||||||| |||||    
T  48293595 gcttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctg 48293648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 441 - 505
Target Start/End: Complemental strand, 22170480 - 22170417
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    ||||||||||||||||||||||| ||||||| |||| | |||||||| |||||||| ||||||||    
T  22170480 gcttaattacacttttggtcctcgtgttttgacctactgacgaaatt-gtcctgcctttttaaaa 22170417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 441 - 505
Target Start/End: Original strand, 48708296 - 48708360
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    |||||||||||||||||||||   ||||||||||||  ||||||| || ||||||||||||||||    
T  48708296 gcttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaa 48708360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 44892692 - 44892622
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||| | ||||||||||| ||||||| |||| |||||||| |||| ||||| |||||||| |||||    
T  44892692 gcttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaac 44892622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 48526197 - 48526267
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||| ||| ||||||| |||| ||| |||| |||  |||||||||||||| |||||    
T  48526197 gcttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaac 48526267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 458 - 511
Target Start/End: Complemental strand, 43243807 - 43243754
Alignment:
Q  458 gtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||| |||||||||||| |||||||| ||||| ||||||||||||| |||||    
T  43243807 gtcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaac 43243754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 505
Target Start/End: Complemental strand, 2118837 - 2118775
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    |||||||||||||||||| || |||||||||||  ||| |||| |||||||  ||||||||||    
T  2118837 ttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaa 2118775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 55189529 - 55189599
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||| | ||||| ||||| ||||||| ||||||||  ||| ||||  |||||||||||||||||||    
T  55189529 gcttaattatatttttgatcctcgtgttttgacctattcataaaaatggttatgcccttttaaaatagaac 55189599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 511
Target Start/End: Complemental strand, 43281317 - 43281264
Alignment:
Q  458 gtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||| |||||||||||| |||||||| ||||| |||| |||||||| |||||    
T  43281317 gtcctcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaac 43281264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 493
Target Start/End: Complemental strand, 55677508 - 55677451
Alignment:
Q  436 ttaatgcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcct 493  Q
    |||| ||||||||||||||||||||||  | ||||| || | ||||||||||||||||    
T  55677508 ttaaggcttaattacacttttggtccttgtattttgaccaactcacgaaattggtcct 55677451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 493
Target Start/End: Original strand, 19528870 - 19528922
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcct 493  Q
    ||||||||||||||||||||||    ||||| || ||||||||||||||||||    
T  19528870 gcttaattacacttttggtccttgcattttgaccaattcacgaaattggtcct 19528922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 511
Target Start/End: Original strand, 45082435 - 45082502
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||| ||||||||| || |||||||| ||| ||||||| | |||  |||||||||||||||||||    
T  45082435 ttaattacgcttttggtcatcgtgttttggtctactcacgaact-ggttttgcccttttaaaatagaac 45082502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 505
Target Start/End: Complemental strand, 48295087 - 48295023
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    ||||||||||| |||||||| || |||||||  ||| |||||||||||||| ||||  |||||||    
T  48295087 gcttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaa 48295023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 1e-23; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 443 - 511
Target Start/End: Complemental strand, 40027682 - 40027614
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||    
T  40027682 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaac 40027614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 239896 - 239826
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||    
T  239896 gcttagttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaac 239826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 1978653 - 1978583
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||| |||||    
T  1978653 gcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaac 1978583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 22374869 - 22374799
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||| |||||    
T  22374869 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaac 22374799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 11091064 - 11090994
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||| ||||||||||||| |||||    
T  11091064 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaac 11090994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 18450831 - 18450901
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| |||||| |||||||||||| |||||    
T  18450831 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaac 18450901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 18451375 - 18451305
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| | |||||| ||||||||||||||||||| |||||    
T  18451375 gcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaac 18451305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 20440575 - 20440505
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||| | |||||||| ||||||||||||||||||| |||||    
T  20440575 gcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaac 20440505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 20444750 - 20444820
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||| | |||||||| ||||||||||||||||||| |||||    
T  20444750 gcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaac 20444820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 22374321 - 22374391
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||| ||||||||||||| |||||    
T  22374321 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaac 22374391  T

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Target: chr2; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 26538623 - 26538553
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||| |||||| |||||    
T  26538623 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaac 26538553  T

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Target: chr2; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 28616614 - 28616684
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||| ||||||||||||| |||||    
T  28616614 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaac 28616684  T

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Target: chr2; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 443 - 511
Target Start/End: Complemental strand, 8425902 - 8425834
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||| ||  |||||||| ||| ||||||||||||||||||||||||||||||||||    
T  8425902 ttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaac 8425834  T

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Target: chr2; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 443 - 511
Target Start/End: Original strand, 11090524 - 11090592
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||| |||||    
T  11090524 ttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaac 11090592  T

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Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 436 - 511
Target Start/End: Original strand, 26538093 - 26538168
Alignment:
Q  436 ttaatgcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||| ||||||||||||||||||||||| ||||||||| || |||||||| |||| |||||||||||||| |||||    
T  26538093 ttaaggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaac 26538168  T

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Target: chr2; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 436 - 511
Target Start/End: Original strand, 40027136 - 40027211
Alignment:
Q  436 ttaatgcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||| |||||||||||||||||||| || |||||||||||| |||||||| ||||| ||||||||||||| |||||    
T  40027136 ttaaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaac 40027211  T

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Target: chr2; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 442 - 505
Target Start/End: Original strand, 40815347 - 40815410
Alignment:
Q  442 cttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    |||||||||||||||||||||| |||||||||||| |||||||| ||||| |||||||||||||    
T  40815347 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaa 40815410  T

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Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 1978109 - 1978179
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||| ||||||||||  |||||||||||| |||||||| ||||||||||||||||||| |||||    
T  1978109 gcttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaac 1978179  T

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Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 7446343 - 7446413
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||| ||||| |||||||| ||| ||| |||||||||||||||||||||||| |||||    
T  7446343 gcttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaac 7446413  T

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Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 28617158 - 28617088
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| |||| ||| |||||||||| |||||    
T  28617158 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaac 28617088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 35781207 - 35781137
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||| ||||| |||||||||||| |||||||| ||||| ||||||||||||| |||||    
T  35781207 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaac 35781137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 43058876 - 43058806
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||| ||||| |||||||||||| |||||||| ||||||||| ||||||||| |||||    
T  43058876 gcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaac 43058806  T

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Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 443 - 507
Target Start/End: Original strand, 14432145 - 14432209
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaata 507  Q
    ||||||||||||||||||||| |||||||||||| ||| |||| ||||| |||||||||||||||    
T  14432145 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaata 14432209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 443 - 511
Target Start/End: Complemental strand, 40815887 - 40815819
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||| |||||||||||| |||||||| ||||  ||||||||||||| |||||    
T  40815887 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaac 40815819  T

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Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 239354 - 239423
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||||||| || |||||||||||| |||||||| |||||||| |||||||||| |||||    
T  239354 gcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctg-ccttttaaaacagaac 239423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 35779709 - 35779779
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| ||||||| | || |||||||| |||||||||| |||||||| |||||    
T  35779709 gcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaac 35779779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 446 - 511
Target Start/End: Original strand, 3025472 - 3025537
Alignment:
Q  446 attacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||| ||||||||||| |||||||||||| |||||||| ||||||||| ||||||||| |||||    
T  3025472 attacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaac 3025537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 441 - 505
Target Start/End: Complemental strand, 3026005 - 3025942
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    ||||||||||| ||||||||||| ||||||||| || ||||||||||||| ||||||||||||||    
T  3026005 gcttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaa 3025942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 443 - 511
Target Start/End: Original strand, 8425358 - 8425426
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||  |||||||||||| |||||||||||||| | || |||||||| |||||    
T  8425358 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaac 8425426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 441 - 505
Target Start/End: Complemental strand, 28847239 - 28847175
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| ||||||||| |||||||||    
T  28847239 gcttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaa 28847175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 7446890 - 7446820
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||| ||||| ||||| ||||||| | || |||||||| ||||||||||||||||||| |||||    
T  7446890 gcttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaac 7446820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 43058334 - 43058404
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||| ||||| |||||||||| | |||| ||| |||||||||| |||||||| |||||    
T  43058334 gcttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaac 43058404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 442 - 511
Target Start/End: Original strand, 8972239 - 8972308
Alignment:
Q  442 cttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||||||||| ||||||||| |  |||||||| ||||| |||||||| |||| |||||    
T  8972239 cttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaac 8972308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 442 - 511
Target Start/End: Complemental strand, 15552596 - 15552528
Alignment:
Q  442 cttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||| | ||||||||||||| |||||||| || ||| |||||||||||| |||||    
T  15552596 cttaattacacttttggtcataatgttttggcctactcacgaaaatgatcc-gcccttttaaaacagaac 15552528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 442 - 510
Target Start/End: Complemental strand, 14432684 - 14432616
Alignment:
Q  442 cttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaa 510  Q
    |||||||||| ||||||||||| |||||||||||| ||| |||| ||||| |||| |||||||| ||||    
T  14432684 cttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaa 14432616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 442 - 505
Target Start/End: Original strand, 15551501 - 15551564
Alignment:
Q  442 cttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    |||||||||||||||||||||| ||||||||  || |||||||| ||||| |||| ||||||||    
T  15551501 cttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaa 15551564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 493
Target Start/End: Original strand, 42192241 - 42192293
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcct 493  Q
    ||||||||||||||||||||||||  ||||| || | |||||||| |||||||    
T  42192241 gcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcct 42192293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 1668 - 1738
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||| |||||    
T  1668 gcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaac 1738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 2211 - 2141
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| | |||||| ||||||||||||||||||| |||||    
T  2211 gcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaac 2141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 4794 - 4864
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||| ||||||||||||| |||||    
T  4794 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaac 4864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 442 - 510
Target Start/End: Complemental strand, 5334 - 5266
Alignment:
Q  442 cttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaa 510  Q
    |||||||||||||||||||||| |||||||||||| |||||||| ||||| || |||||||||| ||||    
T  5334 cttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaa 5266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 19165 - 19095
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||| |||||    
T  19165 gcttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaac 19095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 441 - 505
Target Start/End: Original strand, 18836 - 18900
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    |||| |||||||||||||||||  |||||||||||| |||||||| ||||| |||||||||||||    
T  18836 gcttcattacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaa 18900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 441 - 505
Target Start/End: Complemental strand, 11167 - 11103
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    ||||||||||||||||||||||| |||||||||||| | |||||| |||||||||||||||||||    
T  11167 gcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaa 11103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 459 - 511
Target Start/End: Original strand, 10640 - 10692
Alignment:
Q  459 tcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||| |||||||||||| ||| |||| ||||||||||||||||||| |||||    
T  10640 tcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaac 10692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 1285 - 1215
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||| |||||| ||||||||| || |||||||| ||||||||||||||||||| |||||    
T  1285 gcttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaac 1215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 442 - 511
Target Start/End: Original strand, 755 - 824
Alignment:
Q  442 cttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||| || |||||||||||| |||||| | ||||||||||||||||||| |||||    
T  755 cttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaac 824  T

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Target: scaffold0273 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 4751 - 4681
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||||||| || ||||||||| || |||||||| ||||||||||||||||||| |||||    
T  4751 gcttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaac 4681  T

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Target: scaffold0057 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 443 - 511
Target Start/End: Complemental strand, 62000 - 61932
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||| ||||| |||||||| ||| |||||||| ||||||| |||||||||||||||||    
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaac 61932  T

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Target: scaffold0057; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 61029 - 61099
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||| |||||||||| ||||| |||||||||||| |||||||| || ||||||| ||||||||||||||    
T  61029 gcttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgccattttaaaatagaac 61099  T

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Target: scaffold0007 (Bit Score: 45; Significance: 2e-16; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 443 - 511
Target Start/End: Complemental strand, 64847 - 64779
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||| ||||||||| || |||||||| |||||| |||||||||||| |||||    
T  64847 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaac 64779  T

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Target: scaffold0007; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 511
Target Start/End: Original strand, 64298 - 64373
Alignment:
Q  436 ttaatgcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||| ||||||||||||||||||||||| ||||||| | || |||||||| || ||||| |||||||||| |||||    
T  64298 ttaaggcttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaac 64373  T

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Target: scaffold0007; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 436 - 496
Target Start/End: Complemental strand, 210887 - 210827
Alignment:
Q  436 ttaatgcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcc 496  Q
    |||| ||||||||||||||||||||||||  ||||| || | ||| |||| ||||||||||    
T  210887 ttaaggcttaattacacttttggtcctcacattttgaccaactcatgaaaatggtcctgcc 210827  T

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Target: scaffold1585 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 440 - 511
Target Start/End: Original strand, 567 - 638
Alignment:
Q  440 tgcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||||||| ||||| |||||||||||| |||||||| || || ||||||||||||| |||||    
T  567 tgcttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaac 638  T

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Target: scaffold0019 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 503
Target Start/End: Complemental strand, 134217 - 134155
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaa 503  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| | ||| |||||||||||    
T  134217 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaa 134155  T

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Target: scaffold0432 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 443 - 511
Target Start/End: Original strand, 9935 - 10003
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||| ||||||||||| |||||| |||||||||||||| || || ||||||||||| |||||||    
T  9935 ttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaac 10003  T

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Target: scaffold0432; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 511
Target Start/End: Complemental strand, 10414 - 10346
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||||||| |||||||| ||| |||||||| ||||  | ||||||||||| |||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaac 10346  T

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Target: scaffold0113 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 444 - 511
Target Start/End: Complemental strand, 28784 - 28717
Alignment:
Q  444 taattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||||||||||| || |||||||||||| | |||||| ||||| ||||||||||||| |||||    
T  28784 taattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaac 28717  T

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Target: scaffold0076 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 443 - 505
Target Start/End: Complemental strand, 8551 - 8489
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaa 505  Q
    |||||||||||||||||| ||||||||||| ||| | |||||| ||||||| |||||||||||    
T  8551 ttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaa 8489  T

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Target: scaffold0027 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 511
Target Start/End: Original strand, 42172 - 42240
Alignment:
Q  443 ttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    |||||||||||||| || ||| |||||||| ||| |||||||| || ||||||| |||||||| |||||    
T  42172 ttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaac 42240  T

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Target: scaffold0027; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 42702 - 42632
Alignment:
Q  441 gcttaattacacttttggtcctcatgttttggcctattcacgaaattggtcctgcccttttaaaatagaac 511  Q
    ||||||||| |||||||| |||| |||||||| ||| ||| |||| || | |||||||||||||| |||||    
T  42702 gcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaac 42632  T

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