View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17495_low_15 (Length: 234)
Name: NF17495_low_15
Description: NF17495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17495_low_15 |
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Alignment Details
Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 16 - 219
Target Start/End: Original strand, 41822877 - 41823080
Alignment:
| Q |
16 |
acaaaataattgaatacgtatcaaggaataagcatcaaattaacaacagtgttggaaagataataaaatgctttaacagaatcaaaatgaatagaccctc |
115 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41822877 |
acaaaataattgaatatgtatcaaggaataagcatcaaattaataacagtgatggaaagataataaaatgctttaacagaatcaaaatgaatagaccctc |
41822976 |
T |
|
| Q |
116 |
tcactcaaacaaagaacacaaacgatataaaccatcagaatgaaaaggaaaggtgaaaagcatgtgaaaaataacagtaactcaaggttttgaaactcca |
215 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41822977 |
tcactcaaacaaaaaacacaaacgatataaaccatcagaatgaaaaggaaaggtgaaaagcatgtgaaaaataacagtaactcaaggttttgaaactcca |
41823076 |
T |
|
| Q |
216 |
aact |
219 |
Q |
| |
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|||| |
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| T |
41823077 |
aact |
41823080 |
T |
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