View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17496_high_21 (Length: 324)
Name: NF17496_high_21
Description: NF17496
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17496_high_21 |
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Alignment Details
Target: chr8 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 10 - 307
Target Start/End: Complemental strand, 33605449 - 33605157
Alignment:
| Q |
10 |
ataattctaactgtacaatgggttactaggtgcattgtggtttacaagcaagtatcttgcaagttttagaagttgtatttggcccaccataccaaaacag |
109 |
Q |
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| T |
33605449 |
ataattctaactgtacaatgggttactaggtgcattgtgctttacaagcaagtatcttgcaagttttagaagttgtatttggcccaccataccaaaacag |
33605350 |
T |
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| Q |
110 |
aaaatgttgcaactccagcaccctttctattgaaaattggtcgtcttccatataaaattgctcactcccatacaccaaccaaaatgtctcccacatgact |
209 |
Q |
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| T |
33605349 |
aaaatgttgcaactccagcaccctttctattgaaaattggtcgtcttccatataaaattgctcactcccatacaccgaccaaaatgtctcccacgtgact |
33605250 |
T |
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| Q |
210 |
taactcacgttcgcttacaccaacgtaatctttttctccatatcaaattgtgtatgccccgtatgcaaccattccaatggcaatgtatgggggtaatt |
307 |
Q |
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| T |
33605249 |
taagtcacgttcgcttacaccaacgtaatatttttctccatataaaattgtgtat-----gtatgcaaccattccaaaggcaatgtctggggataatt |
33605157 |
T |
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