View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17496_high_35 (Length: 251)

Name: NF17496_high_35
Description: NF17496
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17496_high_35
NF17496_high_35
[»] chr1 (44 HSPs)
chr1 (122-234)||(29677519-29677631)
chr1 (131-234)||(28006378-28006481)
chr1 (122-234)||(15257171-15257283)
chr1 (121-225)||(47983292-47983396)
chr1 (131-234)||(40159639-40159742)
chr1 (121-234)||(24575937-24576050)
chr1 (122-229)||(6413272-6413379)
chr1 (121-236)||(25124884-25124999)
chr1 (132-234)||(5204479-5204581)
chr1 (121-234)||(7995999-7996112)
chr1 (122-234)||(38061178-38061290)
chr1 (131-234)||(7956352-7956455)
chr1 (130-234)||(31816596-31816700)
chr1 (122-234)||(45581008-45581120)
chr1 (122-231)||(12224575-12224684)
chr1 (122-234)||(35810746-35810858)
chr1 (131-234)||(15014343-15014446)
chr1 (120-234)||(14578583-14578697)
chr1 (120-222)||(50447381-50447483)
chr1 (122-234)||(39802767-39802879)
chr1 (114-234)||(7596421-7596541)
chr1 (123-223)||(45653433-45653532)
chr1 (131-234)||(42916123-42916226)
chr1 (122-220)||(7841665-7841762)
chr1 (122-223)||(7016075-7016176)
chr1 (122-234)||(15306521-15306633)
chr1 (131-234)||(21680665-21680768)
chr1 (131-234)||(46264953-46265056)
chr1 (122-234)||(23916838-23916950)
chr1 (122-234)||(47602862-47602974)
chr1 (122-225)||(36119108-36119211)
chr1 (122-234)||(24469817-24469929)
chr1 (130-234)||(31869622-31869726)
chr1 (122-234)||(32179886-32179998)
chr1 (122-234)||(42937102-42937214)
chr1 (122-234)||(44596545-44596657)
chr1 (131-234)||(20349174-20349277)
chr1 (131-234)||(23915606-23915709)
chr1 (135-234)||(48575093-48575192)
chr1 (130-191)||(9381756-9381817)
chr1 (130-223)||(19508567-19508660)
chr1 (122-223)||(27076515-27076616)
chr1 (122-234)||(7702863-7702975)
chr1 (122-234)||(36419129-36419241)
[»] chr6 (14 HSPs)
chr6 (122-234)||(3081718-3081830)
chr6 (132-234)||(7437332-7437434)
chr6 (122-234)||(13312050-13312164)
chr6 (131-234)||(17441186-17441289)
chr6 (131-234)||(4441310-4441413)
chr6 (130-234)||(18095547-18095651)
chr6 (130-234)||(18099844-18099948)
chr6 (122-234)||(1501876-1501988)
chr6 (122-234)||(5640252-5640364)
chr6 (120-234)||(10961794-10961908)
chr6 (131-210)||(11460023-11460102)
chr6 (130-234)||(6999295-6999399)
chr6 (188-234)||(9950826-9950872)
chr6 (131-220)||(33110500-33110589)
[»] chr7 (44 HSPs)
chr7 (18-121)||(41360300-41360403)
chr7 (119-234)||(33019334-33019449)
chr7 (122-234)||(17025361-17025473)
chr7 (122-234)||(33898944-33899056)
chr7 (122-230)||(21760583-21760691)
chr7 (130-234)||(26719848-26719952)
chr7 (131-234)||(18740227-18740330)
chr7 (131-233)||(18250002-18250104)
chr7 (118-234)||(36472472-36472588)
chr7 (122-234)||(49034224-49034336)
chr7 (122-234)||(35543556-35543668)
chr7 (122-234)||(46573612-46573724)
chr7 (121-234)||(7447909-7448022)
chr7 (122-231)||(32356997-32357106)
chr7 (43-97)||(41531365-41531419)
chr7 (173-230)||(30919459-30919516)
chr7 (121-234)||(37401565-37401678)
chr7 (122-234)||(33124728-33124840)
chr7 (120-234)||(22075096-22075210)
chr7 (130-220)||(31491862-31491952)
chr7 (121-234)||(37334311-37334424)
chr7 (122-234)||(3942209-3942321)
chr7 (122-234)||(33935541-33935653)
chr7 (136-234)||(29037794-29037892)
chr7 (122-232)||(44421901-44422011)
chr7 (122-223)||(11595796-11595897)
chr7 (123-212)||(41449795-41449884)
chr7 (130-234)||(45176278-45176382)
chr7 (131-234)||(5776139-5776242)
chr7 (131-234)||(43052905-43053008)
chr7 (130-234)||(17608745-17608846)
chr7 (132-234)||(23227009-23227111)
chr7 (132-234)||(23236162-23236264)
chr7 (185-234)||(37101162-37101210)
chr7 (122-234)||(27231539-27231651)
chr7 (131-223)||(45055772-45055864)
chr7 (130-169)||(20401094-20401133)
chr7 (131-234)||(36927032-36927135)
chr7 (183-234)||(48634480-48634531)
chr7 (120-222)||(10096516-10096618)
chr7 (121-162)||(48505794-48505835)
chr7 (122-234)||(665847-665959)
chr7 (122-234)||(5794936-5795048)
chr7 (122-234)||(33171534-33171646)
[»] chr5 (40 HSPs)
chr5 (122-234)||(10494013-10494125)
chr5 (122-234)||(27196105-27196217)
chr5 (122-234)||(32945021-32945133)
chr5 (120-234)||(27450579-27450693)
chr5 (131-234)||(34724763-34724866)
chr5 (132-234)||(39407434-39407536)
chr5 (122-203)||(28247469-28247550)
chr5 (122-234)||(3801364-3801476)
chr5 (132-234)||(26299875-26299977)
chr5 (136-225)||(3457867-3457956)
chr5 (122-234)||(26298339-26298451)
chr5 (122-234)||(34719657-34719769)
chr5 (122-234)||(10327958-10328070)
chr5 (122-234)||(38522861-38522973)
chr5 (131-234)||(34857375-34857478)
chr5 (122-234)||(19716211-19716318)
chr5 (122-233)||(5382825-5382936)
chr5 (164-234)||(1225379-1225449)
chr5 (122-222)||(20189013-20189113)
chr5 (132-234)||(2676044-2676146)
chr5 (122-223)||(41783364-41783465)
chr5 (122-234)||(31620896-31621008)
chr5 (130-234)||(36523783-36523887)
chr5 (131-234)||(1840696-1840799)
chr5 (131-234)||(20190594-20190696)
chr5 (196-234)||(28246760-28246798)
chr5 (122-231)||(1091154-1091263)
chr5 (122-223)||(15933202-15933303)
chr5 (133-213)||(28431104-28431184)
chr5 (132-180)||(39409208-39409256)
chr5 (132-223)||(14500716-14500807)
chr5 (130-220)||(17168451-17168541)
chr5 (122-192)||(32156946-32157016)
chr5 (121-234)||(27906126-27906239)
chr5 (174-234)||(34723705-34723765)
chr5 (130-233)||(19282122-19282225)
chr5 (130-212)||(31021913-31021995)
chr5 (122-223)||(26218086-26218187)
chr5 (141-234)||(40056382-40056475)
chr5 (130-234)||(18880220-18880324)
[»] chr4 (49 HSPs)
chr4 (122-234)||(46944544-46944656)
chr4 (131-234)||(12673037-12673140)
chr4 (131-234)||(40797858-40797961)
chr4 (120-234)||(80525-80639)
chr4 (131-234)||(9222141-9222242)
chr4 (122-234)||(49405635-49405747)
chr4 (131-234)||(51995106-51995209)
chr4 (121-234)||(24007902-24008015)
chr4 (122-234)||(48802475-48802588)
chr4 (122-234)||(51407949-51408061)
chr4 (122-234)||(9469805-9469917)
chr4 (134-234)||(34980516-34980616)
chr4 (130-234)||(36156302-36156406)
chr4 (122-234)||(55891985-55892097)
chr4 (123-234)||(19455159-19455270)
chr4 (120-234)||(36543809-36543923)
chr4 (122-184)||(50710784-50710846)
chr4 (122-234)||(1803526-1803633)
chr4 (122-234)||(11055226-11055338)
chr4 (122-234)||(13455729-13455841)
chr4 (131-234)||(39736711-39736814)
chr4 (120-234)||(25134602-25134704)
chr4 (122-234)||(48339099-48339211)
chr4 (122-234)||(50146918-50147030)
chr4 (122-208)||(28265673-28265759)
chr4 (122-234)||(22184531-22184643)
chr4 (122-234)||(48151126-48151238)
chr4 (122-234)||(48731173-48731285)
chr4 (122-234)||(56224173-56224285)
chr4 (131-234)||(26632964-26633067)
chr4 (120-219)||(36643983-36644081)
chr4 (130-220)||(9874216-9874306)
chr4 (122-223)||(4274556-4274657)
chr4 (122-234)||(9906356-9906468)
chr4 (122-234)||(15697083-15697195)
chr4 (130-234)||(52813629-52813733)
chr4 (120-234)||(6866107-6866215)
chr4 (122-171)||(9959422-9959471)
chr4 (122-234)||(12789552-12789664)
chr4 (130-234)||(21441609-21441713)
chr4 (130-214)||(28470867-28470950)
chr4 (182-234)||(44378278-44378330)
chr4 (122-234)||(48977604-48977716)
chr4 (122-234)||(53369900-53370012)
chr4 (175-234)||(7505557-7505616)
chr4 (166-224)||(43798267-43798325)
chr4 (122-234)||(19853006-19853118)
chr4 (122-234)||(45674863-45674975)
chr4 (122-234)||(50606036-50606148)
[»] chr3 (24 HSPs)
chr3 (122-234)||(12710730-12710842)
chr3 (122-234)||(40943589-40943701)
chr3 (131-234)||(20550211-20550314)
chr3 (122-234)||(30662131-30662243)
chr3 (131-234)||(26049549-26049652)
chr3 (122-234)||(33438731-33438843)
chr3 (122-234)||(39469531-39469643)
chr3 (120-234)||(39135382-39135496)
chr3 (122-234)||(9505121-9505233)
chr3 (122-234)||(46293213-46293325)
chr3 (122-234)||(54393443-54393555)
chr3 (143-234)||(15822370-15822461)
chr3 (120-199)||(54432175-54432254)
chr3 (122-234)||(52199457-52199569)
chr3 (131-228)||(45714730-45714827)
chr3 (141-234)||(48730856-48730949)
chr3 (130-234)||(18074604-18074708)
chr3 (122-234)||(32689197-32689309)
chr3 (122-225)||(19560774-19560877)
chr3 (130-233)||(26136362-26136465)
chr3 (131-234)||(52934840-52934943)
chr3 (131-234)||(23206317-23206420)
chr3 (131-234)||(39942809-39942912)
chr3 (137-234)||(31589650-31589747)
[»] chr2 (28 HSPs)
chr2 (122-234)||(40458949-40459061)
chr2 (125-234)||(11006977-11007084)
chr2 (121-234)||(27464571-27464684)
chr2 (122-218)||(29806950-29807046)
chr2 (132-234)||(10412468-10412570)
chr2 (122-234)||(3409188-3409300)
chr2 (122-234)||(13829906-13830018)
chr2 (130-234)||(24844674-24844778)
chr2 (122-233)||(20203714-20203825)
chr2 (131-234)||(30713184-30713287)
chr2 (122-222)||(11027948-11028048)
chr2 (122-234)||(27902439-27902551)
chr2 (122-234)||(28968848-28968960)
chr2 (131-234)||(34116182-34116285)
chr2 (121-234)||(36538684-36538797)
chr2 (194-234)||(1094485-1094525)
chr2 (139-234)||(32713013-32713109)
chr2 (131-234)||(41332259-41332362)
chr2 (131-234)||(44740492-44740595)
chr2 (132-234)||(17616295-17616397)
chr2 (164-234)||(38409613-38409683)
chr2 (130-234)||(16544034-16544138)
chr2 (122-234)||(27634699-27634811)
chr2 (175-234)||(2647027-2647086)
chr2 (131-190)||(40680281-40680340)
chr2 (130-212)||(9753156-9753238)
chr2 (121-234)||(41959171-41959284)
chr2 (122-234)||(33831523-33831635)
[»] scaffold0171 (1 HSPs)
scaffold0171 (121-234)||(21116-21228)
[»] scaffold0135 (1 HSPs)
scaffold0135 (131-234)||(32794-32895)
[»] chr8 (13 HSPs)
chr8 (122-222)||(39478090-39478190)
chr8 (131-223)||(43384833-43384925)
chr8 (130-223)||(12378391-12378484)
chr8 (122-234)||(27189082-27189194)
chr8 (135-234)||(22564034-22564133)
chr8 (121-234)||(33279976-33280089)
chr8 (132-234)||(1091755-1091857)
chr8 (122-234)||(3307962-3308074)
chr8 (122-234)||(453511-453623)
chr8 (126-234)||(34516166-34516274)
chr8 (183-234)||(9412585-9412636)
chr8 (120-223)||(34655074-34655177)
chr8 (166-234)||(23181183-23181251)
[»] scaffold0223 (1 HSPs)
scaffold0223 (122-234)||(14454-14566)
[»] scaffold0022 (1 HSPs)
scaffold0022 (131-223)||(124490-124582)
[»] scaffold0224 (1 HSPs)
scaffold0224 (131-234)||(7317-7420)
[»] scaffold0204 (1 HSPs)
scaffold0204 (122-234)||(26621-26733)
[»] scaffold0063 (1 HSPs)
scaffold0063 (131-234)||(51311-51414)
[»] scaffold0260 (1 HSPs)
scaffold0260 (131-234)||(11497-11600)
[»] scaffold0025 (1 HSPs)
scaffold0025 (121-234)||(11418-11531)
[»] scaffold0444 (1 HSPs)
scaffold0444 (182-234)||(827-879)
[»] scaffold1787 (1 HSPs)
scaffold1787 (122-172)||(87-137)


Alignment Details
Target: chr1 (Bit Score: 97; Significance: 9e-48; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 29677519 - 29677631
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29677519 tagggctggcaatgaaccgaaccaactcgaaaatagttcgatactcgatttgataattggttcgttgaacttggttcacgaaccaaatgagtcgaacttg 29677618  T
Q  222 agttgaaaattaa 234  Q
    |||||||||||||    
T  29677619 agttgaaaattaa 29677631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 28006481 - 28006378
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||  |||||||||| |||||| ||||||||||||||||||||||||||||||    
T  28006481 caatgaaccgaaccaactcgaaaatagttcgagattcgattcgataattgactcgttgaacttggttcatgaaccaaatgagtcgaacttgagttgaaaa 28006382  T
Q  231 ttaa 234  Q
    ||||    
T  28006381 ttaa 28006378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 15257171 - 15257283
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| |||||||||||||||||||| ||||||||| |||| |||||| |||||||||||| ||| ||| |||||| |||||||||||||||||||||    
T  15257171 tagggctgacaatgaaccgaaccaactcaaaaatagtttgatactcgattcgataattggttcattggacttggttcatgaaccaaatgagtcgaacttg 15257270  T
Q  222 agttgaaaattaa 234  Q
    |||||||||||||    
T  15257271 agttgaaaattaa 15257283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 47983396 - 47983292
Alignment:
Q  121 atagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaactt 220  Q
    |||||| | ||||||||||||||||||||||||||||||||| |||||||| |||||||| || |||||||| |||||||||||||||||||||||||||    
T  47983396 atagggttgacaatgaaccgaaccaactcgaaaatagttcgagattcgattcgataattgatttgttgaacttggttcacgaaccaaatgagtcgaactt 47983297  T
Q  221 gagtt 225  Q
    |||||    
T  47983296 gagtt 47983292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 40159639 - 40159742
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||| ||| |||||| ||| ||||||||||||||||||||||||||    
T  40159639 caatgaaccgaaccaactcgaaaatagtttgatattcgattcgataattggttcattggacttggttcatgaatcaaatgagtcgaacttgagttgaaaa 40159738  T
Q  231 ttaa 234  Q
    ||||    
T  40159739 ttaa 40159742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 121 - 234
Target Start/End: Complemental strand, 24576050 - 24575937
Alignment:
Q  121 atagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaactt 220  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||| |||| ||||||||  |||||||||| |||||| |||||||||||  |||||||    
T  24576050 atagggctgacaatgaaccgaaccaactcgaaaatagttcgagatttgattcgataattgactcgttgaacttggttcatgaaccaaatgaaacgaactt 24575951  T
Q  221 gagttgaaaattaa 234  Q
    ||||||||||||||    
T  24575950 gagttgaaaattaa 24575937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 6413379 - 6413272
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  ||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||  |||||| ||||||||||| |||||||||    
T  6413379 tagggctggcaatgaatcgaaccaactcgaaaatagttcgagattcgatttgataattgattcgttgaacctggttcatgaaccaaatgaatcgaacttg 6413280  T
Q  222 agttgaaa 229  Q
    ||||||||    
T  6413279 agttgaaa 6413272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 121 - 236
Target Start/End: Original strand, 25124884 - 25124999
Alignment:
Q  121 atagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaactt 220  Q
    ||||||||  |||||||||||||||||||||  | ||||||  ||||||||||||||||| ||||||||||| |||||| |||||||||||| |||||||    
T  25124884 atagggctggcaatgaaccgaaccaactcgattaaagttcgtaattcgatttgataattgattcgttgaacttggttcatgaaccaaatgagccgaactt 25124983  T
Q  221 gagttgaaaattaatt 236  Q
    ||| ||||||||||||    
T  25124984 gagctgaaaattaatt 25124999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 132 - 234
Target Start/End: Original strand, 5204479 - 5204581
Alignment:
Q  132 aatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaat 231  Q
    |||||| ||||||||||||||||||||| || |||||||| ||||||||  |||||||||| |||||  |||||||||||||||||||||||||||||||    
T  5204479 aatgaatcgaaccaactcgaaaatagtttgagattcgattcgataattgactcgttgaacttggttcgtgaaccaaatgagtcgaacttgagttgaaaat 5204578  T
Q  232 taa 234  Q
    |||    
T  5204579 taa 5204581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 121 - 234
Target Start/End: Complemental strand, 7996112 - 7995999
Alignment:
Q  121 atagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaactt 220  Q
    |||||| | ||||||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||||||| ||||||  |||| ||||||||||||||    
T  7996112 atagggttgacaatgaaccgaaccaacttgaaaatagttcgagattcgattcgataattgattcgttgaacttggttcataaacctaatgagtcgaactt 7996013  T
Q  221 gagttgaaaattaa 234  Q
     |||| ||||||||    
T  7996012 aagtttaaaattaa 7995999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 38061178 - 38061290
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||| | || | ||||| ||||||||||||||     
T  38061178 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgatttgataattgattcgttgaacttgatttatgaacctaatgagtcgaactta 38061277  T
Q  222 agttgaaaattaa 234  Q
    |||| ||||||||    
T  38061278 agtttaaaattaa 38061290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 7956455 - 7956352
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||| ||| ||| |||||| |||| |||| |||||||||||| |||||||    
T  7956455 caatgaaccgaaccaactcgaaaatagttcgatactcaattcgataattggttcattggacttggttcatgaacaaaattagtcgaacttgaattgaaaa 7956356  T
Q  231 ttaa 234  Q
    ||||    
T  7956355 ttaa 7956352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 31816700 - 31816596
Alignment:
Q  130 acaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaa 229  Q
    ||||||||||||||||||||||||||||||||| | || ||| | |||||| ||||||||||| |||||| ||||||||||||| |||||| ||| ||||    
T  31816700 acaatgaaccgaaccaactcgaaaatagttcgaaactcaattcggtaattgattcgttgaacttggttcatgaaccaaatgagttgaacttcagtcgaaa 31816601  T
Q  230 attaa 234  Q
    |||||    
T  31816600 attaa 31816596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 45581008 - 45581120
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| ||||||||||||||||||| ||||||||||||| | |||||| |||||||   |||||||||| |||||| ||||||||||||| |||||||    
T  45581008 tagggctgacaatgaaccgaaccaacttgaaaatagttcgaaactcgattcgataattatctcgttgaacttggttcatgaaccaaatgagttgaacttg 45581107  T
Q  222 agttgaaaattaa 234  Q
    ||  |||||||||    
T  45581108 agcggaaaattaa 45581120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 12224575 - 12224684
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| |||||||||||||||||||||| |||||||||  |||||||| || ||||   |||||||||| |||||| |||||||||||| ||||||||    
T  12224575 tagggctgacaatgaaccgaaccaactcgacaatagttcggaattcgattcgacaattaactcgttgaacttggttcatgaaccaaatgagccgaacttg 12224674  T
Q  222 agttgaaaat 231  Q
    || |||||||    
T  12224675 agctgaaaat 12224684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 35810858 - 35810746
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||||||||||||||||  | ||||||  |||||||| || ||||| ||||||||||| |||||| |||||||||||| ||||||||    
T  35810858 tagggctggcaatgaaccgaaccaactcgattaaagttcgtaattcgattcgacaattgattcgttgaacttggttcatgaaccaaatgagccgaacttg 35810759  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  35810758 agctgaaaattaa 35810746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 15014446 - 15014343
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    |||||||||||||||||||||  | ||||||  |||||||| |||||||| ||||| ||||| | |||| |||||||||||| |||||||||||||||||    
T  15014446 caatgaaccgaaccaactcgattagagttcgtaattcgattcgataattgattcgtcgaacttgattcatgaaccaaatgagccgaacttgagttgaaaa 15014347  T
Q  231 ttaa 234  Q
    ||||    
T  15014346 ttaa 15014343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 120 - 234
Target Start/End: Original strand, 14578583 - 14578697
Alignment:
Q  120 aatagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaact 219  Q
    ||||||||| ||||||||||||||||||||||  | ||||||  |||||||| || ||||| || |||||||| |||||| |||||||||||| ||||||    
T  14578583 aatagggctgacaatgaaccgaaccaactcgattagagttcgtaattcgattagacaattgatttgttgaacttggttcatgaaccaaatgagccgaact 14578682  T
Q  220 tgagttgaaaattaa 234  Q
     ||| ||||||||||    
T  14578683 ggagctgaaaattaa 14578697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 120 - 222
Target Start/End: Complemental strand, 50447483 - 50447381
Alignment:
Q  120 aatagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaact 219  Q
    ||||||||| |||||||||| |||||||||||||||||||||| | |||||| |||||||  |||||| |||| |||| | |||||||||||| ||||||    
T  50447483 aatagggctgacaatgaaccaaaccaactcgaaaatagttcgagactcgattcgataattaattcgttaaacttggtttatgaaccaaatgagccgaact 50447384  T
Q  220 tga 222  Q
    |||    
T  50447383 tga 50447381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 39802767 - 39802879
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  ||||||| |||||||||||||||||||||||| | ||| || |  | ||  ||||||||||  |||||| |||||||||||||||||||||    
T  39802767 tagggctggcaatgaatcgaaccaactcgaaaatagttcgagactcggttcggcagttaattcgttgaacatggttcatgaaccaaatgagtcgaacttg 39802866  T
Q  222 agttgaaaattaa 234  Q
    |||||||||||||    
T  39802867 agttgaaaattaa 39802879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 114 - 234
Target Start/End: Complemental strand, 7596541 - 7596421
Alignment:
Q  114 gtgtagaatagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagt 213  Q
    ||||||| ||||| |  |||||||||||||||||||||  | ||||||  ||| |||| |||||||| ||||| ||||| |||| | ||||||||||||     
T  7596541 gtgtagactaggggttccaatgaaccgaaccaactcgattagagttcgtaatttgattcgataattgattcgtcgaacttggtttatgaaccaaatgagc 7596442  T
Q  214 cgaacttgagttgaaaattaa 234  Q
    |||||||||| ||||||||||    
T  7596441 cgaacttgagctgaaaattaa 7596421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 223
Target Start/End: Original strand, 45653433 - 45653532
Alignment:
Q  123 agggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttga 222  Q
    |||||| |||||||||||| |||||||||||||||||| | | |||||| || ||||  ||||||||||| |||||| |||||||||||| |||||||||    
T  45653433 agggctaacaatgaaccga-ccaactcgaaaatagttcaaaactcgattcgacaattatttcgttgaacttggttcatgaaccaaatgagccgaacttga 45653531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 42916123 - 42916226
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    |||||||||||||||| ||||  |  |||||  |||||||| |||||||| ||||| ||||| |||||| |||||||||||| |||||||||| ||||||    
T  42916123 caatgaaccgaaccaattcgattagtgttcgtaattcgattcgataattgattcgtcgaacttggttcatgaaccaaatgagccgaacttgagctgaaaa 42916222  T
Q  231 ttaa 234  Q
    ||||    
T  42916223 ttaa 42916226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 220
Target Start/End: Complemental strand, 7841762 - 7841665
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaactt 220  Q
    |||||||  |||||||||||||||||||||||||| ||||| | |||||| |||||||  ||||||||||| |||||| |||||||||||  |||||||    
T  7841762 tagggctgtcaatgaaccgaaccaactcgaaaata-ttcgagactcgattcgataattaattcgttgaacttggttcatgaaccaaatgaaccgaactt 7841665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 7016075 - 7016176
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| ||||||||||||||||||||||| | | ||||| | |||||| || ||||| || |||||||| |||||| ||||||||||||  |||||||    
T  7016075 tagggctgacaatgaaccgaaccaactcgaacaaaattcgagactcgattcgacaattgatttgttgaacttggttcatgaaccaaatgagctgaacttg 7016174  T
Q  222 ag 223  Q
    ||    
T  7016175 ag 7016176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 15306633 - 15306521
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||||||||||||| || |||||||||  | |||||| |||||||  ||| ||||||| |||||| ||||||||||||  |||||||    
T  15306633 tagggctggcaatgaaccgaaccaacttgacaatagttcggaactcgattcgataattaattcattgaacttggttcatgaaccaaatgagctgaacttg 15306534  T
Q  222 agttgaaaattaa 234  Q
    ||  |||||||||    
T  15306533 agcggaaaattaa 15306521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 21680665 - 21680768
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    ||||||||||||||| |||||||||||||||| | |||||| |||||||   |||||||||| |||| | |||  ||||||| |||||||||| | ||||    
T  21680665 caatgaaccgaaccagctcgaaaatagttcgaaactcgattcgataattatctcgttgaacttggtttatgaatgaaatgagccgaacttgagctaaaaa 21680764  T
Q  231 ttaa 234  Q
    ||||    
T  21680765 ttaa 21680768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 46264953 - 46265056
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    |||||||||||||||| ||||  |  |||||  |||||||| |||||||| ||||| ||||| |||||| |||| ||||||| |||||||||| ||||||    
T  46264953 caatgaaccgaaccaattcgattagtgttcgtaattcgattcgataattgattcgtcgaacttggttcatgaactaaatgagccgaacttgagctgaaaa 46265052  T
Q  231 ttaa 234  Q
    ||||    
T  46265053 ttaa 46265056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 23916950 - 23916838
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| |||||||||| |||||||||||  | ||||||  |||||||| |||||||| ||| |  |||| ||||||  ||||||||||| | ||||||    
T  23916950 tagggctgacaatgaaccaaaccaactcgattaaagttcgtaattcgattcgataattgattcatcaaacttggttcattaaccaaatgagcctaacttg 23916851  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  23916850 agctgaaaattaa 23916838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 47602862 - 47602974
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| ||||||||||||||||||||||  ||||||||| |||||| | |||| ||  | ||||||||| |||||| ||||| || |||  | |||||    
T  47602862 tagggctgacaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcatgaacctaacgagctggacttg 47602961  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  47602962 agctgaaaattaa 47602974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 225
Target Start/End: Complemental strand, 36119211 - 36119108
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| |||||||||||||||||||  |||||||||||| |||||||| || ||||   |||| ||||| |||| | |||||||||||   |||||||    
T  36119211 tagggctgacaatgaaccgaaccaactaaaaaatagttcgaaattcgattcgacaattttctcgtcgaacttggtttatgaaccaaatgaactgaacttg 36119112  T
Q  222 agtt 225  Q
    ||||    
T  36119111 agtt 36119108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 24469817 - 24469929
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||||||||||||||||  ||||||||| |||||| | |||| ||  | ||||||||| |||||| ||||| || |||  | |||||    
T  24469817 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcatgaacctaacgagctggacttg 24469916  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  24469917 agctgaaaattaa 24469929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 31869726 - 31869622
Alignment:
Q  130 acaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaa 229  Q
    |||||||||||||| || |||| |||||||||  | | |||| || ||||   |||||||||| |||||| |||||||||||| ||||||| || |||||    
T  31869726 acaatgaaccgaactaattcgacaatagttcggaacttgattcgacaattaaatcgttgaacttggttcatgaaccaaatgagccgaacttaagctgaaa 31869627  T
Q  230 attaa 234  Q
    |||||    
T  31869626 attaa 31869622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 32179998 - 32179886
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||||||||||||||||  ||||||||| |||||| | |||| ||  | ||||||||| ||||||  |||| ||||||  | |||||    
T  32179998 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcataaacctaatgagctggacttg 32179899  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  32179898 agctgaaaattaa 32179886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 42937214 - 42937102
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||| ||||||||||||  | ||||||  ||||||||  | ||||| ||||| ||||| |||||| ||| |||||||| ||||||||    
T  42937214 tagggctggcaatgaactgaaccaactcgattagagttcgtaattcgattcaacaattgattcgtcgaacttggttcatgaatcaaatgagccgaacttg 42937115  T
Q  222 agttgaaaattaa 234  Q
    || | ||||||||    
T  42937114 agcttaaaattaa 42937102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 44596657 - 44596545
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  ||||||||||||||||||||| ||||||| |  | |||||| || ||||   |||||||| | |||||| ||||||||||||  |||||||    
T  44596657 tagggctggcaatgaaccgaaccaactcgacaatagtttggaactcgattcgacaattaactcgttgaatttggttcatgaaccaaatgagctgaacttg 44596558  T
Q  222 agttgaaaattaa 234  Q
    |  ||||||||||    
T  44596557 aactgaaaattaa 44596545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 20349277 - 20349174
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    |||||||||||||||||||||| ||||||  | ||| || | |||||||  ||||||||||| | ||||   |||||||||| ||||||| || ||||||    
T  20349277 caatgaaccgaaccaactcgaacatagtttaaaatttgactcgataattaattcgttgaacttgattcatataccaaatgagccgaacttcagatgaaaa 20349178  T
Q  231 ttaa 234  Q
    ||||    
T  20349177 ttaa 20349174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 23915606 - 23915709
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    ||||||| ||||||||||||| || ||||||| | ||||||  | ||||   |||||||||| |||||| ||||||||||||  |||||| || ||||||    
T  23915606 caatgaatcgaaccaactcgacaaaagttcgaaactcgattcaacaattatctcgttgaacttggttcatgaaccaaatgagctgaactttagctgaaaa 23915705  T
Q  231 ttaa 234  Q
    ||||    
T  23915706 ttaa 23915709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 234
Target Start/End: Original strand, 48575093 - 48575192
Alignment:
Q  135 gaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaattaa 234  Q
    ||||||||| ||||||||||||||  || | || ||| | |||||  ||||||||||| |||||| |||||||| || |||||||||| || ||||||||    
T  48575093 gaaccgaactaactcgaaaatagtatgagactcaattcggtaattaattcgttgaacttggttcatgaaccaaacgaatcgaacttgaatttaaaattaa 48575192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 9381817 - 9381756
Alignment:
Q  130 acaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaac 191  Q
    ||||||||||||||||||||||||||| ||||| || ||| | | ||||| |||||||||||    
T  9381817 acaatgaaccgaaccaactcgaaaatatttcgagatccgaatcggtaattagttcgttgaac 9381756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 19508660 - 19508567
Alignment:
Q  130 acaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgag 223  Q
    ||||||||||||  ||||||||| | ||||||  | |||| | | ||||| |||||||||||| |||||| |||||||| ||| ||||||||||    
T  19508660 acaatgaaccgatacaactcgaataaagttcggaactcgactcggtaattagttcgttgaacttggttcatgaaccaaacgagccgaacttgag 19508567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 27076515 - 27076616
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| ||||||||  ||||||||| ||||||||||  | | | |||| |||||||  ||||||||||| ||| || |||| ||||||| ||||||||    
T  27076515 tagggctgacaatgaattgaaccaacttgaaaatagtttaagacttgattcgataattaattcgttgaacttggtccatgaactaaatgagccgaacttg 27076614  T
Q  222 ag 223  Q
    ||    
T  27076615 ag 27076616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 7702975 - 7702863
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||||||||||||||||  ||||||||| |||||| | |||| ||  | ||||||||| |||||| ||| | || |||  | |||||    
T  7702975 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcatgaagctaacgagctggacttg 7702876  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  7702875 agctgaaaattaa 7702863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 36419241 - 36419129
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||||||||||||||||  ||||||||| |||||| | |||| ||  | ||| ||||| |||||| ||||| ||||||  | |||||    
T  36419241 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgtcgaacttggttcatgaacctaatgagctggacttg 36419142  T
Q  222 agttgaaaattaa 234  Q
    ||  |||||||||    
T  36419141 agccgaaaattaa 36419129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 5e-43; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 3081718 - 3081830
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  ||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3081718 tagggctggcaatgaaccgaaccagctcgaaaatagttcgatactcgattcgataattggttcgttgaacttggttcacgaaccaaatgagtcgaacttg 3081817  T
Q  222 agttgaaaattaa 234  Q
    |||||||||||||    
T  3081818 agttgaaaattaa 3081830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 7437434 - 7437332
Alignment:
Q  132 aatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaat 231  Q
    |||||||||||| |||||||||||||||||||| |||||| |||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  7437434 aatgaaccgaactaactcgaaaatagttcgatactcgattcgataatgggttcgttgaacttggttcacgaaccaaatgagtcgaactttagttgaaaat 7437335  T
Q  232 taa 234  Q
    |||    
T  7437334 taa 7437332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 13312164 - 13312050
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatat--tcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaact 219  Q
    |||||||  |||||||||||||||||||||||||||||||||||  |||||| |||||||||||| ||| ||| |||||| |||||||||||||||||||    
T  13312164 tagggctggcaatgaaccgaaccaactcgaaaatagttcgatatactcgattcgataattggttcattggacttggttcatgaaccaaatgagtcgaact 13312065  T
Q  220 tgagttgaaaattaa 234  Q
    |||||||||||||||    
T  13312064 tgagttgaaaattaa 13312050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 17441289 - 17441186
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    ||||||||||||||||| |||||||||||||| | |||||||| |||||  |||||||||||  ||||| ||||||||||||| ||||||||||||||||    
T  17441289 caatgaaccgaaccaacccgaaaatagttcgaaactcgatttggtaattaattcgttgaacttagttcatgaaccaaatgagttgaacttgagttgaaaa 17441190  T
Q  231 ttaa 234  Q
    ||||    
T  17441189 ttaa 17441186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 4441310 - 4441413
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    ||||||||||||||||||||| |||||||||| | |||||| || |||| | |||||||||| ||||||||||| |||||||  ||||||||||||||||    
T  4441310 caatgaaccgaaccaactcgacaatagttcgaaactcgattcgacaattagctcgttgaacttggttcacgaactaaatgagctgaacttgagttgaaaa 4441409  T
Q  231 ttaa 234  Q
    ||||    
T  4441410 ttaa 4441413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 18095651 - 18095547
Alignment:
Q  130 acaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaa 229  Q
    |||||||||| ||||||||| |||| |||| || | |||||| |||||| | ||||||||||| |||||||||||||||| ||||||||||||||| |||    
T  18095651 acaatgaaccaaaccaactcaaaaaaagtttgagactcgattcgataatggattcgttgaacttggttcacgaaccaaataagtcgaacttgagttaaaa 18095552  T
Q  230 attaa 234  Q
    |||||    
T  18095551 attaa 18095547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 18099948 - 18099844
Alignment:
Q  130 acaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaa 229  Q
    |||||||||| |||||||||||||| |||| || | |||||| |||||| | ||||||||||| |||||||||||||||||||||||| ||||||| | |    
T  18099948 acaatgaaccaaaccaactcgaaaaaagtttgagactcgattcgataatggattcgttgaacttggttcacgaaccaaatgagtcgaatttgagttaaca 18099849  T
Q  230 attaa 234  Q
    |||||    
T  18099848 attaa 18099844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 1501988 - 1501876
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| |||||||||||||||||||||| ||| |||||| | ||||||||| ||||   ||||||||||  ||||| |||||||||||  ||||||||    
T  1501988 tagggctgacaatgaaccgaaccaactcgacaattgttcgaaactcgatttgacaattaactcgttgaacttcgttcatgaaccaaatgaaccgaacttg 1501889  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  1501888 agctgaaaattaa 1501876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 5640252 - 5640364
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||||||||||||||||  | ||||||  |||||||| |||||||| ||||| ||||| |||||| |||||||||||| ||||||||    
T  5640252 tagggctggcaatgaaccgaaccaactcgattagagttcgtaattcgattcgataattgattcgtcgaacttggttcatgaaccaaatgagccgaacttg 5640351  T
Q  222 agttgaaaattaa 234  Q
    |  ||||||||||    
T  5640352 aactgaaaattaa 5640364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 120 - 234
Target Start/End: Original strand, 10961794 - 10961908
Alignment:
Q  120 aatagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaact 219  Q
    |||||||||  |||||||||||||||||||||  | |||| |  ||| |||| || ||||| ||||||||||| |||||| ||||||||||||||||| |    
T  10961794 aatagggctggcaatgaaccgaaccaactcgattaaagtttgtaatttgattcgacaattgattcgttgaacttggttcatgaaccaaatgagtcgaatt 10961893  T
Q  220 tgagttgaaaattaa 234  Q
    |||| ||||||||||    
T  10961894 tgagctgaaaattaa 10961908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 11460023 - 11460102
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatg 210  Q
    ||||||||||| ||||||| | |||||||||  | |||||| |||||||| ||||||||||| |||||| ||||||||||    
T  11460023 caatgaaccgatccaactcaataatagttcggaactcgattcgataattgattcgttgaacttggttcatgaaccaaatg 11460102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 6999399 - 6999295
Alignment:
Q  130 acaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaa 229  Q
    ||||| || |||| |||||||| ||||||| || | |||||| |||||||  ||||||||||| |||| | |||| |||||||  ||||||||| |||||    
T  6999399 acaataaatcgaagcaactcgacaatagtttgagactcgattcgataattaattcgttgaacttggttaatgaactaaatgagctgaacttgagctgaaa 6999300  T
Q  230 attaa 234  Q
    |||||    
T  6999299 attaa 6999295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 9950826 - 9950872
Alignment:
Q  188 gaactcggttcacgaaccaaatgagtcgaacttgagttgaaaattaa 234  Q
    ||||| |||||| |||||||||||| |||||||||||||||||||||    
T  9950826 gaacttggttcatgaaccaaatgagccgaacttgagttgaaaattaa 9950872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 220
Target Start/End: Complemental strand, 33110589 - 33110500
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaactt 220  Q
    |||||||||||  ||||||||| | ||||||  | |||| | | ||||| |||||||||||| |||||| |||||||| ||| |||||||    
T  33110589 caatgaaccgatacaactcgaataaagttcggaactcgactcggtaattagttcgttgaacttggttcatgaaccaaacgagccgaactt 33110500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 2e-42; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 121
Target Start/End: Original strand, 41360300 - 41360403
Alignment:
Q  18 gaggatattatgaagagagagaagcgaaattgaaaagtggcagaaaactctcttctcgtcatctataatgatgatatgctgattgtgaactgaagtgtgt 117  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  41360300 gaggatattatgaagagagagaagagaaattgaaaagtggcagagaactctcttctcttcatctatgatgatgatatgctgattgtgaactgaagtgtgt 41360399  T
Q  118 agaa 121  Q
    ||||    
T  41360400 agaa 41360403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 33019449 - 33019334
Alignment:
Q  119 gaatagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaac 218  Q
    ||||| |||| |||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||| |||||||||| ||||| ||||||||    
T  33019449 gaatatggctgacaatgaaccgaaccaactcaaaaatagttcgatactcgattcgataattggttcgttgaacttggttcacgaatcaaataagtcgaac 33019350  T
Q  219 ttgagttgaaaattaa 234  Q
    ||||||||||||||||    
T  33019349 ttgagttgaaaattaa 33019334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 17025361 - 17025473
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| ||||||||||||||||||||||||||||||| |  ||||||| ||||||||  |||||||||| ||||||||||||||||||||||||||||    
T  17025361 tagggctgacaatgaaccgaaccaactcgaaaatagttcaaggttcgattcgataattgactcgttgaacttggttcacgaaccaaatgagtcgaacttg 17025460  T
Q  222 agttgaaaattaa 234  Q
    |||||||||||||    
T  17025461 agttgaaaattaa 17025473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 33898944 - 33899056
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||| |||| ||| ||| |||||| |||||||||||||||||||||    
T  33898944 tagggctgacaatgaaccgaaccaactcgaaaatagttcgatattcgattcgagaattagttcattggacttggttcatgaaccaaatgagtcgaacttg 33899043  T
Q  222 agttgaaaattaa 234  Q
    |||||||||||||    
T  33899044 agttgaaaattaa 33899056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 122 - 230
Target Start/End: Original strand, 21760583 - 21760691
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| | ||||||||||||||||||||||||||||||| | |||||| |||||||| |||||||||||  |||||||||||||||||||||||||||    
T  21760583 tagggctgataatgaaccgaaccaactcgaaaatagttcgaaactcgattcgataattgattcgttgaactttgttcacgaaccaaatgagtcgaacttg 21760682  T
Q  222 agttgaaaa 230  Q
    |||||||||    
T  21760683 agttgaaaa 21760691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 26719952 - 26719848
Alignment:
Q  130 acaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaa 229  Q
    |||||||| |||||||||||||||||||||||||| |||||| |||||||||||| ||| ||| |||||| |||||||||||||||||||||||||||||    
T  26719952 acaatgaatcgaaccaactcgaaaatagttcgatactcgattcgataattggttcattggacttggttcatgaaccaaatgagtcgaacttgagttgaaa 26719853  T
Q  230 attaa 234  Q
    |||||    
T  26719852 attaa 26719848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 18740227 - 18740330
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||  || || |||| |||||| ||||||||||||||||||||||||||||||    
T  18740227 caatgaaccgaaccaactcgaaaatagttcgagattcgatttgataattgactcattaaacttggttcatgaaccaaatgagtcgaacttgagttgaaaa 18740326  T
Q  231 ttaa 234  Q
    ||||    
T  18740327 ttaa 18740330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 131 - 233
Target Start/End: Original strand, 18250002 - 18250104
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    |||||||||||||||||||||||||||||| | | |||||| |||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  18250002 caatgaaccgaaccaactcgaaaatagttcaagactcgattcgataattgattcgttgaacttggttcatgaaccaaatgagtcgaacttgagttgaaaa 18250101  T
Q  231 tta 233  Q
    |||    
T  18250102 tta 18250104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 118 - 234
Target Start/End: Complemental strand, 36472588 - 36472472
Alignment:
Q  118 agaatagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaa 217  Q
    ||||||||||| |||||||||||||||||||||||||||  | |||| |||||| ||||| || ||||||||||| |||||| |||||||||||| ||||    
T  36472588 agaatagggctgacaatgaaccgaaccaactcgaaaataacttgatactcgattcgataaatgattcgttgaacttggttcatgaaccaaatgagccgaa 36472489  T
Q  218 cttgagttgaaaattaa 234  Q
    |||||||||||||||||    
T  36472488 cttgagttgaaaattaa 36472472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 49034224 - 49034336
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  ||| ||||||| |||||||||||||||||||| |||||||| | |||||| ||||||||||| |||||| |||||||||||||||||||||    
T  49034224 tagggctggcaacgaaccgatccaactcgaaaatagttcgaaattcgattcggtaattgtttcgttgaacttggttcatgaaccaaatgagtcgaacttg 49034323  T
Q  222 agttgaaaattaa 234  Q
    |||||||||||||    
T  49034324 agttgaaaattaa 49034336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 35543556 - 35543668
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| |||||||| ||||||||||||||||||||| || | || ||| |||||||| ||||||||||| |||||| |||| ||||||||||||||||    
T  35543556 tagggctgacaatgaatcgaaccaactcgaaaatagtttgagactccattcgataattgattcgttgaacttggttcatgaactaaatgagtcgaacttg 35543655  T
Q  222 agttgaaaattaa 234  Q
    |||||||||||||    
T  35543656 agttgaaaattaa 35543668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 46573612 - 46573724
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  ||||||||||||||||||| |||||| ||||| |||||||| ||||||||  |||||||||| |||||| ||||||||||||||||||||     
T  46573612 tagggctggcaatgaaccgaaccaactcaaaaataattcgagattcgattcgataattgactcgttgaacttggttcatgaaccaaatgagtcgaactta 46573711  T
Q  222 agttgaaaattaa 234  Q
    |||||||||||||    
T  46573712 agttgaaaattaa 46573724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 121 - 234
Target Start/End: Complemental strand, 7448022 - 7447909
Alignment:
Q  121 atagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaactt 220  Q
    |||||||| ||||||||||||||||||||||| |||||||   |||||| | || ||||||||| ||||||| |||||| |||||||||||| |||||||    
T  7448022 atagggctgacaatgaaccgaaccaactcgaatatagttcataattcgactcgacaattggttcattgaacttggttcatgaaccaaatgagccgaactt 7447923  T
Q  221 gagttgaaaattaa 234  Q
    ||| ||||||||||    
T  7447922 gagctgaaaattaa 7447909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 231
Target Start/End: Complemental strand, 32357106 - 32356997
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| |||||||||| ||||||||  |||||||||||| | |||||| |||||||  ||||||||||| | |||| |||| ||||||| |||| |||    
T  32357106 tagggctgacaatgaaccaaaccaacttaaaaatagttcgagactcgattcgataattaattcgttgaacttgattcatgaactaaatgagccgaatttg 32357007  T
Q  222 agttgaaaat 231  Q
    ||||||||||    
T  32357006 agttgaaaat 32356997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 41531365 - 41531419
Alignment:
Q  43 gaaattgaaaagtggcagaaaactctcttctcgtcatctataatgatgatatgct 97  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  41531365 gaaattgaaaagtggcagagaattctcttctcgtcatctataatgatgatatgct 41531419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 30919516 - 30919459
Alignment:
Q  173 gataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  30919516 gataattgattcgttgaacttggtttacgaaccaaatgagtcgaacttgagttgaaaa 30919459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 234
Target Start/End: Original strand, 37401565 - 37401678
Alignment:
Q  121 atagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaactt 220  Q
    |||||||| |||||||||| |||||| ||||  | ||||||  |||||||| || ||||| || |||||||| | |||| |||||||||||| | |||||    
T  37401565 atagggctgacaatgaaccaaaccaattcgattagagttcgtaattcgattcgaaaattgatttgttgaacttgattcatgaaccaaatgagccaaactt 37401664  T
Q  221 gagttgaaaattaa 234  Q
    ||||||||||||||    
T  37401665 gagttgaaaattaa 37401678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 33124840 - 33124728
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  ||||||||||||||||||||| ||||||| || | |||||| || ||||   |||||||||| |||| | ||||||||||| | |||||||    
T  33124840 tagggctggcaatgaaccgaaccaactcgacaatagtttgaaactcgattcgacaattaactcgttgaacttggtttatgaaccaaatgaattgaacttg 33124741  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  33124740 agctgaaaattaa 33124728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 234
Target Start/End: Complemental strand, 22075210 - 22075096
Alignment:
Q  120 aatagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaact 219  Q
    |||||||||  ||||||||||||||||||||| |||||||    | |||||| || ||||   |||||||||  |||||||||||||||||||  |||||    
T  22075210 aatagggctggcaatgaaccgaaccaactcgataatagtttagaactcgattcgacaattaactcgttgaacgtggttcacgaaccaaatgagctgaact 22075111  T
Q  220 tgagttgaaaattaa 234  Q
    |||| ||||||||||    
T  22075110 tgagctgaaaattaa 22075096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 220
Target Start/End: Complemental strand, 31491952 - 31491862
Alignment:
Q  130 acaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaactt 220  Q
    ||||||||||||| |||||| ||||||||| || |||||||| |||||||  ||||||||||| |   || ||||||||||||||||||||    
T  31491952 acaatgaaccgaatcaactcaaaaatagtttgagattcgattcgataattaattcgttgaacttgacacatgaaccaaatgagtcgaactt 31491862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 121 - 234
Target Start/End: Complemental strand, 37334424 - 37334311
Alignment:
Q  121 atagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaactt 220  Q
    |||||| | ||||||||||||||||||||||  ||||||||| |||||||| |||| ||  | ||||||||| |||||| ||||| || |||  | ||||    
T  37334424 atagggttgacaatgaaccgaaccaactcgattatagttcgacattcgattcgatatttaatccgttgaacttggttcatgaacctaacgagctggactt 37334325  T
Q  221 gagttgaaaattaa 234  Q
    ||| ||||||||||    
T  37334324 gagctgaaaattaa 37334311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 3942321 - 3942209
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| ||||||||||||||||||||||  | ||||||  |||||||| || | ||| ||| ||||||| |||||| |||||||||||  |  |||||    
T  3942321 tagggctgacaatgaaccgaaccaactcgattaaagttcgtaattcgattcgacagttgattcattgaacttggttcatgaaccaaatgaaccagacttg 3942222  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  3942221 agctgaaaattaa 3942209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 33935653 - 33935541
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  ||||||| ||||||||||||| ||||||| |  | |||||| |||||||   |||||||||| |||||| |||||||| |||  |||||||    
T  33935653 tagggctggcaatgaatcgaaccaactcgacaatagtttgggactcgattcgataattaactcgttgaacttggttcatgaaccaaacgagctgaacttg 33935554  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  33935553 agctgaaaattaa 33935541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 234
Target Start/End: Original strand, 29037794 - 29037892
Alignment:
Q  136 aaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaattaa 234  Q
    ||||| |||| ||||||||||||| || | |||||| | |||||  || | ||||||  ||||| |||||||||||| |||||||||||||||||||||    
T  29037794 aaccgtaccagctcgaaaatagtttgagactcgattcggtaattaatttgctgaactttgttcatgaaccaaatgagacgaacttgagttgaaaattaa 29037892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 232
Target Start/End: Original strand, 44421901 - 44422011
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  ||||||||||||||||||||| ||||||| |  | |||||| || ||||   |||||||||| |||||| |||||||| |||  |||||||    
T  44421901 tagggctgtcaatgaaccgaaccaactcgacaatagtttgggactcgattcgacaattaactcgttgaacttggttcatgaaccaaacgagctgaacttg 44422000  T
Q  222 agttgaaaatt 232  Q
    || ||||||||    
T  44422001 agctgaaaatt 44422011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 11595796 - 11595897
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| ||||||||||||  ||||||||| | ||||||  | |||| | | ||||| |||||||||||| |||||| |||||||| ||| ||||||||    
T  11595796 tagggctgacaatgaaccgatacaactcgaataaagttcggaactcgactcggtaattagttcgttgaacttggttcatgaaccaaacgagccgaacttg 11595895  T
Q  222 ag 223  Q
    ||    
T  11595896 ag 11595897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 212
Target Start/End: Complemental strand, 41449884 - 41449795
Alignment:
Q  123 agggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgag 212  Q
    |||||| ||||||| |||||||||||||| |||||||||| | |||||| || ||||   |||||||||| |||||| || |||||||||    
T  41449884 agggctgacaatgatccgaaccaactcgacaatagttcgaaactcgattcgacaattatctcgttgaacttggttcatgatccaaatgag 41449795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 45176382 - 45176278
Alignment:
Q  130 acaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaa 229  Q
    |||||||||||||| |||||||  |||||| || |||||| | |||||||  | ||||||||| |||||| |||||||| |||  |||||| || |||||    
T  45176382 acaatgaaccgaacaaactcgattatagtttgacattcgactcgataattaatccgttgaacttggttcatgaaccaaacgagctgaactttagctgaaa 45176283  T
Q  230 attaa 234  Q
    |||||    
T  45176282 attaa 45176278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 5776139 - 5776242
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    |||||||||||||||||||||  ||||||||| |||||| | |||| ||  | ||||||||| |||||| ||||| || |||  | ||||||| ||||||    
T  5776139 caatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcatgaacctaacgagctggacttgagctgaaaa 5776238  T
Q  231 ttaa 234  Q
    ||||    
T  5776239 ttaa 5776242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 43053008 - 43052905
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    |||||||||||||||||||||  ||||||||| |||||| | |||| ||  | ||||||||| |||||| ||||| ||||||  | |||||||  |||||    
T  43053008 caatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcatgaacctaatgagctggacttgagccgaaaa 43052909  T
Q  231 ttaa 234  Q
    ||||    
T  43052908 ttaa 43052905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 17608846 - 17608745
Alignment:
Q  130 acaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaa 229  Q
    ||||||||||||| |||||||| || ||||||  ||||||||    ||||| ||||| ||||| |||| | |||||||||||| |||||||||  |||||    
T  17608846 acaatgaaccgaatcaactcgataaaagttcgtaattcgattc---aattgattcgtcgaacttggttgatgaaccaaatgagccgaacttgatctgaaa 17608750  T
Q  230 attaa 234  Q
    |||||    
T  17608749 attaa 17608745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 234
Target Start/End: Original strand, 23227009 - 23227111
Alignment:
Q  132 aatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaat 231  Q
    ||||| |||||||||||||| |||||||||| | |||||| || ||||   | |||||||| ||| || ||| ||||||||  ||||||||| |||||||    
T  23227009 aatgatccgaaccaactcgacaatagttcgaaactcgattcgacaattatcttgttgaacttggtacatgaatcaaatgagctgaacttgagctgaaaat 23227108  T
Q  232 taa 234  Q
    |||    
T  23227109 taa 23227111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 234
Target Start/End: Original strand, 23236162 - 23236264
Alignment:
Q  132 aatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaat 231  Q
    ||||| |||||||||||||| |||||||||| | |||||| || ||||   | |||||||| ||| || ||| ||||||||  ||||||||| |||||||    
T  23236162 aatgatccgaaccaactcgacaatagttcgaaactcgattcgacaattatcttgttgaacttggtacatgaatcaaatgagctgaacttgagctgaaaat 23236261  T
Q  232 taa 234  Q
    |||    
T  23236262 taa 23236264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 37101162 - 37101210
Alignment:
Q  185 gttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaattaa 234  Q
    |||||||||| |||||||| ||||||||| ||||||||||||||||||||    
T  37101162 gttgaactcgattcacgaatcaaatgagt-gaacttgagttgaaaattaa 37101210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 27231539 - 27231651
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| |||||||||||||||| ||  |  | ||||||  |||||||| |||||||| ||||| ||||| | |||| | | |||||||| ||||||||    
T  27231539 tagggctgacaatgaaccgaaccagcttaattagagttcgtaattcgattcgataattgattcgtcgaacttgattcatgtatcaaatgagccgaacttg 27231638  T
Q  222 agttgaaaattaa 234  Q
    |  ||||||||||    
T  27231639 aactgaaaattaa 27231651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 45055864 - 45055772
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgag 223  Q
    |||||||||||  ||||||||| | ||||||  | |||| | | ||||| |||||||||||| |||||| |||||||| ||| ||||||||||    
T  45055864 caatgaaccgatacaactcgaataaagttcggaactcgactcggtaattagttcgttgaacttggttcatgaaccaaacgagccgaacttgag 45055772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Complemental strand, 20401133 - 20401094
Alignment:
Q  130 acaatgaaccgaaccaactcgaaaatagttcgatattcga 169  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  20401133 acaatgaaccgaaccaactcgaatatagttcgaaattcga 20401094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 36927135 - 36927032
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    |||||||||||||||||||||  ||||||||| |||||| | ||||  |  | ||||||||| |||||| ||||| || |||| | ||||||| | ||||    
T  36927135 caatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagttggacttgagctaaaaa 36927036  T
Q  231 ttaa 234  Q
    ||||    
T  36927035 ttaa 36927032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 48634531 - 48634480
Alignment:
Q  183 tcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaattaa 234  Q
    |||||||||| |||||| ||||||||||||| ||||||||| | ||||||||    
T  48634531 tcgttgaacttggttcatgaaccaaatgagttgaacttgagctaaaaattaa 48634480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 222
Target Start/End: Complemental strand, 10096618 - 10096516
Alignment:
Q  120 aatagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaact 219  Q
    |||||||||  |||||||| ||  ||| ||||| ||||||||| | |||| | || |||| |||| | ||||| |||||| ||||||||||||| |||||    
T  10096618 aatagggctggcaatgaactgaggcaattcgaacatagttcgaaactcgactcgacaatttgttcatcgaacttggttcatgaaccaaatgagttgaact 10096519  T
Q  220 tga 222  Q
    |||    
T  10096518 tga 10096516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 48505794 - 48505835
Alignment:
Q  121 atagggctcacaatgaaccgaaccaactcgaaaatagttcga 162  Q
    |||||||| ||||||||||||||||||||||  |||||||||    
T  48505794 atagggctgacaatgaaccgaaccaactcgattatagttcga 48505835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 665847 - 665959
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||||||||||||||||  ||||||||| |||||| | |||| ||  | |||| || | |||||| ||||| || |||  | |||||    
T  665847 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttaaatttggttcatgaacctaacgagctggacttg 665946  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  665947 agctgaaaattaa 665959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 5794936 - 5795048
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  ||||||||||||||||| |||  ||||||||| |||||| | ||||  |  | ||||||||| |||||| ||||| || |||  | |||||    
T  5794936 tagggctggcaatgaaccgaaccaacccgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggacttg 5795035  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  5795036 agctgaaaattaa 5795048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 33171534 - 33171646
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||| |||||||||||||| |||||||||| | |||||  || ||||   | |||||||| | || | ||||||||||||  |||||||    
T  33171534 tagggctggcaatgatccgaaccaactcgataatagttcgaaactcgataagacaattatcttgttgaacttgatttatgaaccaaatgagctgaacttg 33171633  T
Q  222 agttgaaaattaa 234  Q
    || | ||||||||    
T  33171634 agctaaaaattaa 33171646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 3e-38; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 10494125 - 10494013
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  ||||||||||||||||||| ||||||||| |||||||||||  ||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  10494125 tagggctggcaatgaaccgaaccaactcaaaaatagtttgatattcgattcaataattggttcgttgaacttggttcacaaaccaaatgagtcgaacttg 10494026  T
Q  222 agttgaaaattaa 234  Q
    |||||||||||||    
T  10494025 agttgaaaattaa 10494013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 27196217 - 27196105
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| ||||||||||||||||||||||||||||||||| | |||||| |||||||| |||||| || | |||||| |||||||||||||||||||||    
T  27196217 tagggctgacaatgaaccgaaccaactcgaaaatagttcgagactcgattcgataattgattcgttaaatttggttcatgaaccaaatgagtcgaacttg 27196118  T
Q  222 agttgaaaattaa 234  Q
    |||||||||||||    
T  27196117 agttgaaaattaa 27196105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 32945021 - 32945133
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| ||||||||||||||||||||||||||||||||| | |||||| | |||||| |||||| |||| |||||| |||||||||||||||||||||    
T  32945021 tagggctgacaatgaaccgaaccaactcgaaaatagttcgaaactcgattcggtaattgattcgttaaacttggttcatgaaccaaatgagtcgaacttg 32945120  T
Q  222 agttgaaaattaa 234  Q
    |||  ||||||||    
T  32945121 agtcaaaaattaa 32945133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 120 - 234
Target Start/End: Original strand, 27450579 - 27450693
Alignment:
Q  120 aatagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaact 219  Q
    |||||||||  |||||||||||||||||||||||||||| ||| |||||||| |||||||| ||||||||| | | |||| ||||| |||||||||||||    
T  27450579 aatagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaatttgattcatgaacctaatgagtcgaact 27450678  T
Q  220 tgagttgaaaattaa 234  Q
    |||||| ||||||||    
T  27450679 tgagtttaaaattaa 27450693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 34724763 - 34724866
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    |||||||||||||||||| |||||||||  || ||||||||||||||||| ||||||||||| | |||| ||||| ||||||||||||||||||| ||||    
T  34724763 caatgaaccgaaccaacttgaaaatagtgtgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaa 34724862  T
Q  231 ttaa 234  Q
    ||||    
T  34724863 ttaa 34724866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 39407536 - 39407434
Alignment:
Q  132 aatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaat 231  Q
    |||||||||||||||||| |||||||| ||| |||||||| |||||||| ||||||||||| | |||| ||||| ||||||||||||||||||| |||||    
T  39407536 aatgaaccgaaccaactcaaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaat 39407437  T
Q  232 taa 234  Q
    |||    
T  39407436 taa 39407434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 28247550 - 28247469
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaa 203  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||    
T  28247550 tagggctgacaatgaaccgaaccaattcgaaaatagttcgatatttgatttgataattgattcgttgaacttggttcacgaa 28247469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 3801364 - 3801476
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||||||||||||||||| ||||||||  |||||| | || ||||||||| ||||||| |||||| |||||||||||| ||||||||    
T  3801364 tagggctggcaatgaaccgaaccaactcgaatatagttcgtaattcgactcgacaattggttcattgaacttggttcatgaaccaaatgagccgaacttg 3801463  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  3801464 agctgaaaattaa 3801476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 26299977 - 26299875
Alignment:
Q  132 aatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaat 231  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||   |||| ||||| |||||||| |||||||||| |||||    
T  26299977 aatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttcattcatgaacctaatgagtcaaacttgagtttaaaat 26299878  T
Q  232 taa 234  Q
    |||    
T  26299877 taa 26299875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 225
Target Start/End: Complemental strand, 3457956 - 3457867
Alignment:
Q  136 aaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagtt 225  Q
    |||||||||||||||||||||||| || |||||||||| ||||| |||||||||||||| |||  ||||||||||| |||||||||||||    
T  3457956 aaccgaaccaactcgaaaatagtttgagattcgatttggtaattagttcgttgaactcgattcttgaaccaaatgaatcgaacttgagtt 3457867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 26298451 - 26298339
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  ||||||||||||||||||| ||||||||  || |||||||| |||||||| ||||||||||| | |||| ||||| |||||||| ||||||    
T  26298451 tagggctggcaatgaaccgaaccaactcaaaaatagtgtgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcaaacttg 26298352  T
Q  222 agttgaaaattaa 234  Q
    |||| ||||||||    
T  26298351 agtttaaaattaa 26298339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 34719657 - 34719769
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  ||||||| |||||||||||||||||||| ||| ||| |||| |||||||| ||||||||||| | |||| ||||  |||||||||||||||    
T  34719657 tagggctggcaatgaaacgaaccaactcgaaaatagtgcgagatttgattcgataattgattcgttgaacttgattcatgaacttaatgagtcgaacttg 34719756  T
Q  222 agttgaaaattaa 234  Q
    |||| ||||||||    
T  34719757 agtttaaaattaa 34719769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 10328070 - 10327958
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| |||||||||||||||||||||||||| |||| | | |||||| | |||||| ||||||||||| | |||| ||||||||||| || ||||||    
T  10328070 tagggctgacaatgaaccgaaccaactcgaaaattgttcaaaactcgattcggtaattgattcgttgaacttgattcatgaaccaaatgaatcaaacttg 10327971  T
Q  222 agttgaaaattaa 234  Q
    ||| ||| |||||    
T  10327970 agtcgaatattaa 10327958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 38522861 - 38522973
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||||||||||||||||| ||||||||  ||| || | |||||||||| | ||||||| |||||| |||||||||||| | ||||||    
T  38522861 tagggctggcaatgaaccgaaccaactcgaatatagttcgtaatttgactcgataattggtccattgaacttggttcatgaaccaaatgagccaaacttg 38522960  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  38522961 agctgaaaattaa 38522973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 34857478 - 34857375
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    ||||||||||||||||||||||||||||  || |||| |||  ||||||| ||||||||||| | |||| ||| | ||||||||||||||||||| ||||    
T  34857478 caatgaaccgaaccaactcgaaaatagtgtgagattcaattcaataattgattcgttgaacttgattcatgaatctaatgagtcgaacttgagtttaaaa 34857379  T
Q  231 ttaa 234  Q
    ||||    
T  34857378 ttaa 34857375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 19716318 - 19716211
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||||||||||||||||||||||| ||| |||||||     ||||| ||||||||||| | |||| ||||| ||||||||||||||     
T  19716318 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgat-----aattgattcgttgaacttgattcatgaacctaatgagtcgaactta 19716224  T
Q  222 agttgaaaattaa 234  Q
    |||| ||||||||    
T  19716223 agtttaaaattaa 19716211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 233
Target Start/End: Original strand, 5382825 - 5382936
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| ||||||||| ||||||||| ||||| ||||||| | |||||| | |||||  ||||||||||| | |||| |||||||| ||||||||| ||    
T  5382825 tagggctgacaatgaactgaaccaacttgaaaagagttcgagactcgattcggtaattaattcgttgaacttgattcatgaaccaaacgagtcgaacctg 5382924  T
Q  222 agttgaaaatta 233  Q
    |||| |||||||    
T  5382925 agtttaaaatta 5382936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 1225449 - 1225379
Alignment:
Q  164 attcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaattaa 234  Q
    |||||||| |||||||| |||||||||||  ||| | ||||||||||||||||||||||||||||||||||    
T  1225449 attcgattcgataattgtttcgttgaacttagtttatgaaccaaatgagtcgaacttgagttgaaaattaa 1225379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 20189113 - 20189013
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| ||||||||||||| ||||||||  | ||||||  ||| |||| |||||||| ||||| ||||| |||||| |||||||||||| ||||||||    
T  20189113 tagggctgacaatgaaccgaatcaactcgattagagttcgtaatttgattcgataattgattcgtcgaacttggttcatgaaccaaatgagccgaacttg 20189014  T
Q  222 a 222  Q
    |    
T  20189013 a 20189013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 2676146 - 2676044
Alignment:
Q  132 aatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaat 231  Q
    |||||||| |||||| ||||  | ||||||  |||||||  || ||||| ||||| ||||| |||||| ||||||||||||||||||||||| |||||||    
T  2676146 aatgaaccaaaccaattcgattaaagttcgtaattcgatccgacaattgattcgtcgaactaggttcatgaaccaaatgagtcgaacttgagctgaaaat 2676047  T
Q  232 taa 234  Q
    |||    
T  2676046 taa 2676044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 41783465 - 41783364
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| ||||||||||||  ||||||||| | ||||||  | |||| | | ||||| |||||||||||| |||||| |||||||||||| ||||||||    
T  41783465 tagggctgacaatgaaccgatacaactcgaataaagttcggaactcgactcggtaattagttcgttgaacttggttcatgaaccaaatgagccgaacttg 41783366  T
Q  222 ag 223  Q
    ||    
T  41783365 ag 41783364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 31621008 - 31620896
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| ||||||||||||||||||| ||| ||||||||| |||||| | || |||| || | ||||| | |||||| ||||| ||||||| ||||||     
T  31621008 tagggctgacaatgaaccgaaccaacttgaatatagttcgaaattcgactcgacaattagtccattgaatttggttcatgaacctaatgagttgaacttc 31620909  T
Q  222 agttgaaaattaa 234  Q
    || |||| |||||    
T  31620908 agctgaatattaa 31620896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 36523887 - 36523783
Alignment:
Q  130 acaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaa 229  Q
    |||||||||||||  |||||||| | ||| ||| | | |||| |||||| | ||| ||||||| |||||| |||||||||||||||||||||| || |||    
T  36523887 acaatgaaccgaattaactcgaataaagtccgagacttgattcgataatagattcattgaacttggttcatgaaccaaatgagtcgaacttgatttaaaa 36523788  T
Q  230 attaa 234  Q
    |||||    
T  36523787 attaa 36523783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 1840696 - 1840799
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    ||||||||||||||||||||| ||||||||   | || ||| || ||||   |||||||||| |||||| ||||||||||||  ||||||||| ||||||    
T  1840696 caatgaaccgaaccaactcgacaatagttcagaactcaattcgacaattaactcgttgaacttggttcatgaaccaaatgagctgaacttgagctgaaaa 1840795  T
Q  231 ttaa 234  Q
    ||||    
T  1840796 ttaa 1840799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 20190594 - 20190696
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    ||||||||||||||||||| |  | ||||||  |||||||| |||||||| ||| | ||||| |||||| |||||||||||| |||||||||| | ||||    
T  20190594 caatgaaccgaaccaactctatta-agttcgtaattcgattcgataattgattcatcgaacttggttcatgaaccaaatgagccgaacttgagctcaaaa 20190692  T
Q  231 ttaa 234  Q
    ||||    
T  20190693 ttaa 20190696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 234
Target Start/End: Complemental strand, 28246798 - 28246760
Alignment:
Q  196 ttcacgaaccaaatgagtcgaacttgagttgaaaattaa 234  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28246798 ttcacgaaccaaatgagtcgaacttgagttgaaaattaa 28246760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 231
Target Start/End: Complemental strand, 1091263 - 1091154
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| || ||||||||||||||||  |||| ||||| | | |||||| ||||||   |||||||||||  |||||| ||| ||||| ||||||||||    
T  1091263 tagggctgacgatgaaccgaaccaacttaaaaaaagttcaagactcgattcgataatgaattcgttgaacttagttcacaaactaaatgggtcgaacttg 1091164  T
Q  222 agttgaaaat 231  Q
    |||| |||||    
T  1091163 agttaaaaat 1091154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 15933303 - 15933202
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||||||||||||||||  ||||||||| |||||| | || | ||  ||||||||||| |||||| ||||| ||||||| |||| ||    
T  15933303 tagggctggcaatgaaccgaaccaactcgagtatagttcgaaattcgactcgacagttaattcgttgaacttggttcatgaacctaatgagttgaacatg 15933204  T
Q  222 ag 223  Q
    ||    
T  15933203 ag 15933202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 213
Target Start/End: Complemental strand, 28431184 - 28431104
Alignment:
Q  133 atgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagt 213  Q
    ||||||| |||||||||| |||||||||||||  ||||| ||||||||  | |||||||| |||||| |||| ||||||||    
T  28431184 atgaaccaaaccaactcgtaaatagttcgatacacgattcgataattgaattgttgaacttggttcatgaactaaatgagt 28431104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 39409256 - 39409208
Alignment:
Q  132 aatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattg 180  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||||||    
T  39409256 aatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattg 39409208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 223
Target Start/End: Original strand, 14500716 - 14500807
Alignment:
Q  132 aatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgag 223  Q
    ||||||||||  ||||||||| | ||||||  | |||| | ||||||| |||||||||||| |||||| |||||||| ||| ||||||||||    
T  14500716 aatgaaccgatacaactcgaatacagttcggaactcgactcgataattagttcgttgaacttggttcatgaaccaaacgagccgaacttgag 14500807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 220
Target Start/End: Original strand, 17168451 - 17168541
Alignment:
Q  130 acaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaactt 220  Q
    |||||||||||||  ||||||||||||||| || | | |||| |||| ||  || |||||||| ||||||| ||||||||||| |||||||    
T  17168451 acaatgaaccgaagtaactcgaaaatagtttgagactagattcgatatttaatttgttgaacttggttcacaaaccaaatgagccgaactt 17168541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 32156946 - 32157016
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaact 192  Q
    |||||||| |||||||||||||||| ||||| ||||||||  |||||| |||| ||||||| | |||||||    
T  32156946 tagggctcgcaatgaaccgaaccaattcgaatatagttcgtaattcgacttgacaattggtccattgaact 32157016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 234
Target Start/End: Complemental strand, 27906239 - 27906126
Alignment:
Q  121 atagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaactt 220  Q
    ||||||||  |||||||||||||||||||||  ||||||||| |||||| | ||||  |  | ||||||||| |||||| ||||| || |||  | ||||    
T  27906239 atagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggactt 27906140  T
Q  221 gagttgaaaattaa 234  Q
    ||| ||||||||||    
T  27906139 gagctgaaaattaa 27906126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 34723705 - 34723765
Alignment:
Q  174 ataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaattaa 234  Q
    ||||||| ||||||||||| | |||| ||||| ||||||||||| ||||||| ||||||||    
T  34723705 ataattgattcgttgaacttgattcatgaacctaatgagtcgaatttgagtttaaaattaa 34723765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 233
Target Start/End: Original strand, 19282122 - 19282225
Alignment:
Q  130 acaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaa 229  Q
    ||||||| | |||||||||||| |||||||||  | |  ||| || ||||   |||||||||| |||||| ||||||||||||  ||||||||| |||||    
T  19282122 acaatgagctgaaccaactcgataatagttcggaacttcattcgacaattaactcgttgaacttggttcatgaaccaaatgagctgaacttgagctgaaa 19282221  T
Q  230 atta 233  Q
    ||||    
T  19282222 atta 19282225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 31021995 - 31021913
Alignment:
Q  130 acaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgag 212  Q
    ||||||||||||||||||||||| ||||||||  | |||| | |||||||   |||||||  | |||||| ||||||||||||    
T  31021995 acaatgaaccgaaccaactcgaatatagttcggaactcgactcgataattaactcgttgagtttggttcatgaaccaaatgag 31021913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 26218187 - 26218086
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||||||  |||||| || | ||||||  | |||| | | ||||| |||||||||||| |||||| |||||||| ||| ||||||||    
T  26218187 tagggctggcaatgaaccgatacaactcaaataaagttcggaactcgactcggtaattagttcgttgaacttggttcatgaaccaaacgagccgaacttg 26218088  T
Q  222 ag 223  Q
    ||    
T  26218087 ag 26218086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 234
Target Start/End: Original strand, 40056382 - 40056475
Alignment:
Q  141 aaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaattaa 234  Q
    ||||||||||| ||||||| || |||||||| || ||||   |||||||| | |||||| ||||||||| |||  || ||||| ||||||||||    
T  40056382 aaccaactcgataatagtttgaaattcgattcgacaattatctcgttgaatttggttcatgaaccaaataagttaaatttgagatgaaaattaa 40056475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 18880324 - 18880220
Alignment:
Q  130 acaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaa 229  Q
    ||||||||||||||||||||||  ||||||||| |||||| | ||||  |  | ||||||||| |||||| ||||| || |||  | |||| || |||||    
T  18880324 acaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggacttaagctgaaa 18880225  T
Q  230 attaa 234  Q
    |||||    
T  18880224 attaa 18880220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 3e-38; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 46944544 - 46944656
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| |||||||||||||||||||| |||||||||||| |||||||| ||||||||| |||||||||| |||||| |||||||||||||||||||||    
T  46944544 tagggctgacaatgaaccgaaccaactcaaaaatagttcgagattcgattcgataattggctcgttgaacttggttcatgaaccaaatgagtcgaacttg 46944643  T
Q  222 agttgaaaattaa 234  Q
    |||||||| ||||    
T  46944644 agttgaaatttaa 46944656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 12673037 - 12673140
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||  |||||||||| |||||| ||||||||||||||||||||||||||||||    
T  12673037 caatgaaccgaaccaactcgaaaatagttcgagattcgattcgataattgactcgttgaacttggttcatgaaccaaatgagtcgaacttgagttgaaaa 12673136  T
Q  231 ttaa 234  Q
    ||||    
T  12673137 ttaa 12673140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 40797961 - 40797858
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    ||||||||||||||||||| |||||||||||||| | |||| |||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||    
T  40797961 caatgaaccgaaccaactcaaaaatagttcgatacttgattcgataattggttcattgaacttggttcatgaaccaaatgagtcgaacttgagttgaaaa 40797862  T
Q  231 ttaa 234  Q
    ||||    
T  40797861 ttaa 40797858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 120 - 234
Target Start/End: Complemental strand, 80639 - 80525
Alignment:
Q  120 aatagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaact 219  Q
    |||||||||  ||||||||||| |||||||||||||||||||| ||| |||| | |||||| ||||||||||| |||||| |||||||||||||||||||    
T  80639 aatagggctggcaatgaaccgatccaactcgaaaatagttcgaaatttgattcggtaattgtttcgttgaacttggttcatgaaccaaatgagtcgaact 80540  T
Q  220 tgagttgaaaattaa 234  Q
    |||||||||||||||    
T  80539 tgagttgaaaattaa 80525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 9222141 - 9222242
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    |||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||| |||||||  |||||||||||||||||||||||| |||    
T  9222141 caatgaaccgaaccaactcgaaaatagttcgatactcgattcgacaattggttcgttgaacttggttcac--accaaatgagtcgaacttgagttgtaaa 9222238  T
Q  231 ttaa 234  Q
    ||||    
T  9222239 ttaa 9222242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 49405635 - 49405747
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| |||||||||||||||||| |||||||||||||| | |||||| | |||||| ||||||||||| |||| | |||||||||||||||||||||    
T  49405635 tagggctgacaatgaaccgaaccaacccgaaaatagttcgaaactcgattcggtaattgattcgttgaacttggtttatgaaccaaatgagtcgaacttg 49405734  T
Q  222 agttgaaaattaa 234  Q
    | | |||||||||    
T  49405735 aatcgaaaattaa 49405747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 51995209 - 51995106
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    |||||||||||||||||||||||||||||||| | |||||| |||||||  ||||||||||| |||||| |||||||||||| |||||||||| | ||||    
T  51995209 caatgaaccgaaccaactcgaaaatagttcgagactcgattcgataattaattcgttgaacttggttcatgaaccaaatgagccgaacttgagctcaaaa 51995110  T
Q  231 ttaa 234  Q
    ||||    
T  51995109 ttaa 51995106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 121 - 234
Target Start/End: Original strand, 24007902 - 24008015
Alignment:
Q  121 atagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaactt 220  Q
    |||||||| ||||||||  ||||||||||||||||||||||| |||||||||||| |||| ||||||||||| |||||| ||||| || ||||  |||||    
T  24007902 atagggctgacaatgaattgaaccaactcgaaaatagttcgagattcgatttgatgattgattcgttgaacttggttcatgaacctaacgagttaaactt 24008001  T
Q  221 gagttgaaaattaa 234  Q
    ||||| ||||||||    
T  24008002 gagtttaaaattaa 24008015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 48802475 - 48802588
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattg-gttcgttgaactcggttcacgaaccaaatgagtcgaactt 220  Q
    ||||||| ||||||||||||||||||||||||||||||||| | |||||||| | ||||  ||  ||||||| | |||| ||||||||||||||||||||    
T  48802475 tagggctgacaatgaaccgaaccaactcgaaaatagttcgaaactcgatttggttattgatttttttgaacttgattcatgaaccaaatgagtcgaactt 48802574  T
Q  221 gagttgaaaattaa 234  Q
    |||| |||||||||    
T  48802575 gagtcgaaaattaa 48802588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 51407949 - 51408061
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| ||||||||| ||||||||||||||||||||||| | |||||| | |||||  |||||| |||| |||||| |||||||||||||||||| ||    
T  51407949 tagggctgacaatgaactgaaccaactcgaaaatagttcgagactcgattcggtaattaattcgttcaacttggttcatgaaccaaatgagtcgaacctg 51408048  T
Q  222 agttgaaaattaa 234  Q
     ||| ||||||||    
T  51408049 ggtttaaaattaa 51408061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 9469917 - 9469805
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| ||||||||||||||||||||||| ||||||||  |||||| | || |||||||   ||||||| |||||| |||||||||||| | ||||||    
T  9469917 tagggctgacaatgaaccgaaccaactcgaatatagttcgtaattcgactcgacaattggtctattgaacttggttcatgaaccaaatgagccaaacttg 9469818  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  9469817 agctgaaaattaa 9469805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 234
Target Start/End: Original strand, 34980516 - 34980616
Alignment:
Q  134 tgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaatta 233  Q
    |||||| ||||||||||||||||||| || | |||||| |||||||| ||| ||||||| | |||| ||| ||||||| |||||||||||||||||||||    
T  34980516 tgaaccaaaccaactcgaaaatagtttgagactcgattcgataattgattcattgaacttgattcatgaatcaaatgaatcgaacttgagttgaaaatta 34980615  T
Q  234 a 234  Q
    |    
T  34980616 a 34980616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 234
Target Start/End: Original strand, 36156302 - 36156406
Alignment:
Q  130 acaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaa 229  Q
    ||||||||||||||||||||||  | ||||||  |||||||| || ||||| ||||||||||| |||||  |||||||||||| |||||||||| |||||    
T  36156302 acaatgaaccgaaccaactcgattaaagttcgtaattcgattcgacaattgattcgttgaacttggttcttgaaccaaatgagccgaacttgagctgaaa 36156401  T
Q  230 attaa 234  Q
    |||||    
T  36156402 attaa 36156406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 55891985 - 55892097
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| ||||||||| |||||||||| |||||||||||| | |||||| | |||||  ||||||||||| |||||| |||||||| ||||||||| ||    
T  55891985 tagggctgacaatgaactgaaccaactcaaaaatagttcgagactcgattcggtaattaattcgttgaacttggttcatgaaccaaacgagtcgaacctg 55892084  T
Q  222 agttgaaaattaa 234  Q
     ||| ||||||||    
T  55892085 ggtttaaaattaa 55892097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 19455159 - 19455270
Alignment:
Q  123 agggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttga 222  Q
    |||||| |||||||||||| |  | ||||||||||||||| | ||||||||| ||||  ||||||||||| |||||| ||| ||||||||  ||||||||    
T  19455159 agggctgacaatgaaccgagcttattcgaaaatagttcgaaactcgatttgacaattaattcgttgaacttggttcatgaatcaaatgagctgaacttga 19455258  T
Q  223 gttgaaaattaa 234  Q
    ||||||||||||    
T  19455259 gttgaaaattaa 19455270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 120 - 234
Target Start/End: Complemental strand, 36543923 - 36543809
Alignment:
Q  120 aatagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaact 219  Q
    ||||||||| ||||||||| ||||||||||||| ||||||||  |||||| | || ||||||| | ||||||| |||||| ||||||||| || | ||||    
T  36543923 aatagggctgacaatgaactgaaccaactcgaatatagttcgtaattcgactcgacaattggtccattgaacttggttcatgaaccaaataagccaaact 36543824  T
Q  220 tgagttgaaaattaa 234  Q
    |||| ||||||||||    
T  36543823 tgagctgaaaattaa 36543809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 50710784 - 50710846
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttc 184  Q
    ||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  50710784 tagggctgacaatgaaccgaatcaactcgaaaatagttcgatactcgatttgataattggttc 50710846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 1803633 - 1803526
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| ||||||||||||||||||||||||| ||| ||| |||||||     ||||| |||||| |||| | |||| ||||| |||||||||||||||    
T  1803633 tagggctgacaatgaaccgaaccaactcgaaaagagtgcgagattcgat-----aattgattcgttaaacttgattcatgaacctaatgagtcgaacttg 1803539  T
Q  222 agttgaaaattaa 234  Q
    |||| ||||||||    
T  1803538 agtttaaaattaa 1803526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 11055226 - 11055338
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| |||||||||||||||||||||| |||||||||  | |||||| |||||||   || ||||||| |||||| ||||||||||||  |||||||    
T  11055226 tagggctgacaatgaaccgaaccaactcgacaatagttcggaactcgattcgataattaactcattgaacttggttcatgaaccaaatgagctgaacttg 11055325  T
Q  222 agttgaaaattaa 234  Q
    ||  |||||||||    
T  11055326 agcggaaaattaa 11055338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 13455841 - 13455729
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| ||||| ||||||||||||| ||||||| || || |||||||| |||||||  ||||||||||| | || | |||||||||||||| ||||||    
T  13455841 tagggctgacaataaaccgaaccaacttgaaaataatttgagattcgattcgataattaattcgttgaacttgatttatgaaccaaatgagtccaacttg 13455742  T
Q  222 agttgaaaattaa 234  Q
    || | ||||||||    
T  13455741 agctcaaaattaa 13455729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 39736814 - 39736711
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    |||| ||| ||| |||||||||||||||| || | |||||| |||||||| ||||||||| | |||||||| ||||||| |||||||||||| || ||||    
T  39736814 caataaactgaatcaactcgaaaatagtttgagactcgattcgataattgattcgttgaatttggttcacggaccaaataagtcgaacttgaattaaaaa 39736715  T
Q  231 ttaa 234  Q
    ||||    
T  39736714 ttaa 39736711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 234
Target Start/End: Complemental strand, 25134704 - 25134602
Alignment:
Q  120 aatagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaact 219  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||            |||||||  ||| ||| |||||| |||||||||||||||||||    
T  25134704 aatagggctgacaatgaaccgaaccaactcgaaaatagttggata------------attggtttattggacttggttcatgaaccaaatgagtcgaact 25134617  T
Q  220 tgagttgaaaattaa 234  Q
    |||||||||||||||    
T  25134616 tgagttgaaaattaa 25134602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 48339099 - 48339211
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| |||||||| ||||||||||| |  | ||||||  |||||||| || || || || |||||||| |||||| ||| |||||||||||||||||    
T  48339099 tagggctgacaatgaatcgaaccaactcaattagagttcgtaattcgattcgacaactgatttgttgaacttggttcatgaatcaaatgagtcgaacttg 48339198  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  48339199 agctgaaaattaa 48339211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 50146918 - 50147030
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||||||||||| ||||  | ||||||  |||||||| || ||||| ||||||||||| |||||| |||||||||||  || |||||    
T  50146918 tagggctagcaatgaaccgaaccaattcgattaaagttcgtaattcgattcgacaattgattcgttgaacttggttcatgaaccaaatgaaccggacttg 50147017  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  50147018 agctgaaaattaa 50147030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 208
Target Start/End: Original strand, 28265673 - 28265759
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaa 208  Q
    |||||||  |||||||| ||||||||||||||||||||||| | |||||| | |||||  ||||||||||| |||||| ||||||||    
T  28265673 tagggctggcaatgaactgaaccaactcgaaaatagttcgagactcgattcggtaattaattcgttgaacttggttcatgaaccaaa 28265759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 22184643 - 22184531
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  ||||||||||||||||||||| ||||||| |  | |||||| || ||||   |||||||||| |||||| |||||||| |||  |||||||    
T  22184643 tagggctggcaatgaaccgaaccaactcgacaatagtttgggactcgattcgacaattaactcgttgaacttggttcatgaaccaaacgagctgaacttg 22184544  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  22184543 agctgaaaattaa 22184531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 48151126 - 48151238
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  ||||||  ||||||||||||| |||||||||| | |||||| || ||||   | |||||||| ||||||| |||||||||||  |||||||    
T  48151126 tagggcttgcaatgattcgaaccaactcgacaatagttcgaaactcgattcgacaattatcttgttgaacttggttcacaaaccaaatgagctgaacttg 48151225  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  48151226 agctgaaaattaa 48151238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 48731173 - 48731285
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||||||||||||||||| ||||||||| |||||| | || ||||||| | ||||| | |||||| ||||||||| |   |||||||    
T  48731173 tagggctgccaatgaaccgaaccaactcgaatatagttcgaaattcgactcgacaattggtccattgaatttggttcatgaaccaaataaactgaacttg 48731272  T
Q  222 agttgaaaattaa 234  Q
    || | ||||||||    
T  48731273 agctaaaaattaa 48731285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 56224285 - 56224173
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| |||||||||||||||||||| || ||||||||| | | || |  | ||||  ||||||||||| |||| |  ||||||||||| ||||||||    
T  56224285 tagggctgacaatgaaccgaaccaactcaaacatagttcgaaacttgactcaacaattaattcgttgaacttggttaataaaccaaatgagccgaacttg 56224186  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  56224185 agctgaaaattaa 56224173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 26633067 - 26632964
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    ||||||||||||||||||||| |||||||||  | |||||| || ||||   |||||||||| || |||  |||||||||||  ||||||||| ||||||    
T  26633067 caatgaaccgaaccaactcgataatagttcgtaactcgattcgacaattaactcgttgaacttggctcattaaccaaatgagctgaacttgagctgaaaa 26632968  T
Q  231 ttaa 234  Q
    ||||    
T  26632967 ttaa 26632964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 219
Target Start/End: Original strand, 36643983 - 36644081
Alignment:
Q  120 aatagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaact 219  Q
    ||||||||| ||||| |||||||||||||| |||||||||||| | || |||||||||||   || |||||||  ||||| ||||||||||||| |||||    
T  36643983 aatagggctgacaatcaaccgaaccaactccaaaatagttcgagactc-atttgataattaactcattgaactttgttcatgaaccaaatgagttgaact 36644081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 220
Target Start/End: Original strand, 9874216 - 9874306
Alignment:
Q  130 acaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaactt 220  Q
    |||||||||||||||||||| |||||||||| | ||||||||   |||||  ||||||||| | ||| || |||||||||||| |||||||    
T  9874216 acaatgaaccgaaccaactcaaaaatagttcaagattcgattcagtaattaattcgttgaaattggtacatgaaccaaatgagccgaactt 9874306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 4274556 - 4274657
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||||||||||||||||||||||||||| | | |||| || ||||   |||||||||  | |||| ||| |||||||| ||||||||    
T  4274556 tagggctagcaatgaaccgaaccaactcgaaaatagttcgaaacttgattcgacaattatctcgttgaacctgattcatgaaacaaatgagccgaacttg 4274655  T
Q  222 ag 223  Q
    ||    
T  4274656 ag 4274657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 9906356 - 9906468
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| |||||||||  ||||||||  ||||||||| || ||| ||||   ||||| |||||||||||| | |||| ||   |||||| |||||||||    
T  9906356 tagggctgacaatgaactaaaccaacttaaaaatagtttgagatttgattcagtaattagttcgttgaacttgattcatgacttaaatgattcgaacttg 9906455  T
Q  222 agttgaaaattaa 234  Q
    |||||||||||||    
T  9906456 agttgaaaattaa 9906468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 15697083 - 15697195
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| ||||||||||||  ||||||||| | ||||||| | |||| | || ||||| ||||||||||| | |||| ||||||||| ||  |||||||    
T  15697083 tagggctgacaatgaaccgagacaactcgaataaagttcgagactcgactcgacaattgattcgttgaacttgattcatgaaccaaataagctgaacttg 15697182  T
Q  222 agttgaaaattaa 234  Q
    || | ||||||||    
T  15697183 agctaaaaattaa 15697195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 52813733 - 52813629
Alignment:
Q  130 acaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaa 229  Q
    |||||||||||||||||||||| ||||||| |  | || |||||| ||||   |||||||||| |||||| |||||||| |||  |||||| || |||||    
T  52813733 acaatgaaccgaaccaactcgacaatagtttgggactctatttgacaattaactcgttgaacttggttcatgaaccaaacgagctgaacttaagctgaaa 52813634  T
Q  230 attaa 234  Q
    |||||    
T  52813633 attaa 52813629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 234
Target Start/End: Original strand, 6866107 - 6866215
Alignment:
Q  120 aatagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaact 219  Q
    ||||||| | ||||||||||||||||||||||  | ||||      | |||| |||||||| |||||  |||| |||||| |||||||||||| ||||||    
T  6866107 aatagggttgacaatgaaccgaaccaactcgattaaagtt------ttgattcgataattgattcgtcaaacttggttcatgaaccaaatgagccgaact 6866200  T
Q  220 tgagttgaaaattaa 234  Q
    |||| ||||||||||    
T  6866201 tgagctgaaaattaa 6866215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 9959471 - 9959422
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatt 171  Q
    ||||||| |||||||||||||||||||||| |||||||||| | ||||||    
T  9959471 tagggctgacaatgaaccgaaccaactcgacaatagttcgaaactcgatt 9959422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 12789552 - 12789664
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||||||||||||||||  ||||||||| |||||| | ||||  |  | ||||||||| |||| | ||||| || |||  |||||||    
T  12789552 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggtttatgaacctaacgagctgaacttg 12789651  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  12789652 agctgaaaattaa 12789664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 21441713 - 21441609
Alignment:
Q  130 acaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaa 229  Q
    ||||||||||||||||||||||  ||||||||| |||||| | ||||  |  | ||||||||| |||||| ||||| || |||  | ||||||| |||||    
T  21441713 acaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggacttgagctgaaa 21441614  T
Q  230 attaa 234  Q
    |||||    
T  21441613 attaa 21441609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 214
Target Start/End: Complemental strand, 28470950 - 28470867
Alignment:
Q  130 acaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtc 214  Q
    |||||||||  |||||||||||||| ||| ||| | |||||| | |||||  ||||||||||| |||||| ||||||||||||||    
T  28470950 acaatgaactaaaccaactcgaaaaaagtacga-actcgattcggtaattaattcgttgaacttggttcatgaaccaaatgagtc 28470867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 44378330 - 44378278
Alignment:
Q  182 ttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaattaa 234  Q
    ||||||||||| |||||| ||||||||||||| ||| ||| ||||||||||||    
T  44378330 ttcgttgaacttggttcatgaaccaaatgagttgaatttgggttgaaaattaa 44378278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 48977716 - 48977604
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||||||||||||||||  ||| ||||| |||||| | |||| ||  |||||||||||  ||||| ||||| ||||||  | || ||    
T  48977716 tagggctggcaatgaaccgaaccaactcgattataattcgacattcgactcgatatttaattcgttgaacttcgttcatgaacctaatgagctggacatg 48977617  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  48977616 agctgaaaattaa 48977604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 53370012 - 53369900
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||||||||||||||||  ||||||||| |||| | | |||| ||  | ||||||||| |||||| ||||| || |||  | |||||    
T  53370012 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcaactcgatatttaatccgttgaacttggttcatgaacctaacgagctggacttg 53369913  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  53369912 agctgaaaattaa 53369900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 7505616 - 7505557
Alignment:
Q  175 taattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaattaa 234  Q
    ||||| |||||||||||| | |||| |||||||||||| |||||||||| | ||||||||    
T  7505616 taattagttcgttgaacttgattcatgaaccaaatgagccgaacttgagctaaaaattaa 7505557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 224
Target Start/End: Original strand, 43798267 - 43798325
Alignment:
Q  166 tcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagt 224  Q
    |||||| |||||||   ||||||||||||||||  |||||||||||||||| |||||||    
T  43798267 tcgattcgataattaactcgttgaactcggttcttgaaccaaatgagtcgagcttgagt 43798325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 19853118 - 19853006
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  ||||||| |||||||||||||  |||||| || |||||| | |||| ||  | ||||||||| |||||| ||||| || |||  | |||||    
T  19853118 tagggctgtcaatgaatcgaaccaactcgattatagtttgacattcgactcgatatttaatccgttgaacttggttcatgaacctaacgagatggacttg 19853019  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  19853018 agctgaaaattaa 19853006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 45674975 - 45674863
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||||||||||||||||  ||||||||| |||||| | ||||  |  | ||| ||||| |||||| ||||| || |||  | |||||    
T  45674975 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgtcgaacttggttcatgaacctaacgagctggacttg 45674876  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  45674875 agctgaaaattaa 45674863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 50606148 - 50606036
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||||||||||| ||||  ||||||||| |||||| | ||||  |  | ||||||||| |||||| ||||| || |||  | |||||    
T  50606148 tagggctggcaatgaaccgaaccaattcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggacttg 50606049  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  50606048 agctgaaaattaa 50606036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 3e-38; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 12710842 - 12710730
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||||||||||||||||||||||||||| |||||||| ||||||||  |||||||||| |||||| |||||||||||||||||||||    
T  12710842 tagggctggcaatgaaccgaaccaactcgaaaatagttcgagattcgattcgataattgactcgttgaacttggttcatgaaccaaatgagtcgaacttg 12710743  T
Q  222 agttgaaaattaa 234  Q
    |||||||||||||    
T  12710742 agttgaaaattaa 12710730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 40943701 - 40943589
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||| |||||| |||||||||||||||||||||    
T  40943701 tagggctggcaataaaccgaaccaactcgaaaatagttcgatactcgatttgataattggttcattggacttggttcatgaaccaaatgagtcgaacttg 40943602  T
Q  222 agttgaaaattaa 234  Q
    |||||||||||||    
T  40943601 agttgaaaattaa 40943589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 20550211 - 20550314
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    ||||||||| |||||||||||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||| |||||||||||    
T  20550211 caatgaaccaaaccaactcgaaaatagttcgatactcgattcgataattgatttgttgaacttggttcacgaaccaaatgagtcgaacatgagttgaaaa 20550310  T
Q  231 ttaa 234  Q
    ||||    
T  20550311 ttaa 20550314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 30662131 - 30662243
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| ||||||| |||||||||||||||||||||| || |||||||| ||||||||  |||||||||| |||||| ||| |||||||||||||||||    
T  30662131 tagggctgacaatgagccgaaccaactcgaaaatagtttgagattcgattcgataattgactcgttgaacttggttcatgaatcaaatgagtcgaacttg 30662230  T
Q  222 agttgaaaattaa 234  Q
    |||||||||||||    
T  30662231 agttgaaaattaa 30662243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 26049549 - 26049652
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    ||||||||||||||||||||||||||||| || |||||||| ||||||||    |||||||| |||||| ||| ||||||||||||||||||||||||||    
T  26049549 caatgaaccgaaccaactcgaaaatagtttgagattcgattcgataattgacctgttgaacttggttcatgaatcaaatgagtcgaacttgagttgaaaa 26049648  T
Q  231 ttaa 234  Q
    ||||    
T  26049649 ttaa 26049652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 33438731 - 33438843
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| ||||||||||||||||||||||  | |||| |  |||||||| || ||||| ||||||||||| |||||| |||||||||||||||||||||    
T  33438731 tagggctgacaatgaaccgaaccaactcgattaaagtttgtaattcgattcgacaattgattcgttgaacttggttcatgaaccaaatgagtcgaacttg 33438830  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  33438831 agctgaaaattaa 33438843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 39469531 - 39469643
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| | ||||||| ||||||||||||| ||||||||  |||||||| |||||||||| | ||||||| |||||| ||| |||||||| ||||||||    
T  39469531 tagggctgataatgaactgaaccaactcgaatatagttcgtaattcgattcgataattggtccattgaacttggttcatgaatcaaatgagccgaacttg 39469630  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  39469631 agctgaaaattaa 39469643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 120 - 234
Target Start/End: Complemental strand, 39135496 - 39135382
Alignment:
Q  120 aatagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaact 219  Q
    |||||||||  |||| ||||||||||||||||| |||||||   |||||| | || ||||||||| ||||||| |||||| |||||||||||| ||||||    
T  39135496 aatagggctggcaataaaccgaaccaactcgaatatagttcataattcgactcgacaattggttcattgaacttggttcatgaaccaaatgagccgaact 39135397  T
Q  220 tgagttgaaaattaa 234  Q
    |||| ||||||||||    
T  39135396 tgagctgaaaattaa 39135382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 9505121 - 9505233
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  ||||||||||||||||||||| |||||||||  | |||||| || ||||   |||||||||| |||||| ||||||||||||| |||||||    
T  9505121 tagggctggcaatgaaccgaaccaactcgacaatagttcggaactcgattcgacaattaactcgttgaacttggttcatgaaccaaatgagttgaacttg 9505220  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  9505221 agctgaaaattaa 9505233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 46293213 - 46293325
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| ||||||||||||| ||||||||| ||||||| | |||||| |||| |||||||   ||||| | |||||| |||||||||||| ||||||||    
T  46293213 tagggctgacaatgaaccgaatcaactcgaatatagttcaaaattcgacttgacaattggtcaattgaatttggttcatgaaccaaatgagccgaacttg 46293312  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  46293313 agctgaaaattaa 46293325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 54393443 - 54393555
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||||||||||||||||  | ||||||  |||||||| || ||||| ||||||||||| ||||||  ||||||||||| ||||||||    
T  54393443 tagggctggcaatgaaccgaaccaactcgattaaagttcgtaattcgattcgacaattgattcgttgaacttggttcataaaccaaatgagccgaacttg 54393542  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  54393543 agctgaaaattaa 54393555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 15822370 - 15822461
Alignment:
Q  143 ccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaattaa 234  Q
    |||| ||||||||||||||| |||||||| | |||||| ||||||||||| |||||| || |||| ||||| ||||||||||||||||||||    
T  15822370 ccaattcgaaaatagttcgaaattcgattcggtaattgtttcgttgaacttggttcatgatccaattgagtagaacttgagttgaaaattaa 15822461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 54432175 - 54432254
Alignment:
Q  120 aatagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttca 199  Q
    |||||||||  |||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||| ||| ||||||    
T  54432175 aatagggctggcaatgaaccgaaccaactcgaaaatagttcgatactcgattcgataattggttcattggacttggttca 54432254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 52199569 - 52199457
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| |||||||| ||||||||||||| ||||||| |  | |||||| || ||||  ||||||||||| |||||| |||||||| |||  |||||||    
T  52199569 tagggctgacaatgaatcgaaccaactcgacaatagtttgggactcgattcgacaattaattcgttgaacttggttcatgaaccaaacgagctgaacttg 52199470  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  52199469 agctgaaaattaa 52199457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 228
Target Start/End: Complemental strand, 45714827 - 45714730
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaa 228  Q
    |||||||| ||||||||||||  | |||||| ||||||||| || ||||| ||||||||||| | ||||  || ||||||||||||||||||| ||||    
T  45714827 caatgaactgaaccaactcgattaaagttcgttattcgattcgacaattgattcgttgaacttgattcataaatcaaatgagtcgaacttgagctgaa 45714730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 234
Target Start/End: Original strand, 48730856 - 48730949
Alignment:
Q  141 aaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaattaa 234  Q
    |||||||||||||||||||||| |||||||||| |||||  |||||| |||| | |||| ||||||||| |||| ||||| |||  ||||||||    
T  48730856 aaccaactcgaaaatagttcgagattcgatttgctaattaattcgttaaacttgattcatgaaccaaataagtcaaacttaagtgcaaaattaa 48730949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 18074708 - 18074604
Alignment:
Q  130 acaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaa 229  Q
    ||||||||| || |||||||||| | ||||||| | ||||||||||||||  ||||||||| | | |||| |||| |||||||| ||| ||||  |||||    
T  18074708 acaatgaactgagccaactcgaatagagttcgagactcgatttgataattaattcgttgaatttgtttcatgaactaaatgagttgaatttgaactgaaa 18074609  T
Q  230 attaa 234  Q
    |||||    
T  18074608 attaa 18074604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 32689309 - 32689197
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| ||||||||||||||||||||||  ||||||||| |||||| | ||||  |  | ||||||||| |||||| ||||| || |||  | |||||    
T  32689309 tagggctgacaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggacttg 32689210  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  32689209 agctgaaaattaa 32689197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 225
Target Start/End: Original strand, 19560774 - 19560877
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||||||||||||||||| ||||||||  |||||| | || ||||  ||||||||||| |||||| |||| |||  ||  |||||||    
T  19560774 tagggctggcaatgaaccgaaccaactcgaatatagttcggaattcgactcgacaattaattcgttgaacttggttcatgaacgaaacaagctgaacttg 19560873  T
Q  222 agtt 225  Q
    ||||    
T  19560874 agtt 19560877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 233
Target Start/End: Complemental strand, 26136465 - 26136362
Alignment:
Q  130 acaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaa 229  Q
    |||||||||| |||||||| || ||||||| || | |||||| | ||||| ||| |||||||| |||| | |||| || |||| |||||||||||| |||    
T  26136465 acaatgaacccaaccaacttgataatagtttgagactcgattcgttaattagtttgttgaacttggtttatgaactaagtgagccgaacttgagttcaaa 26136366  T
Q  230 atta 233  Q
    ||||    
T  26136365 atta 26136362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 52934943 - 52934840
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    |||||||| ||||||||| || |||||||||  | |||||| |||||||   || ||||||| |||||| ||||||||||||  |||||||||  |||||    
T  52934943 caatgaactgaaccaacttgacaatagttcggaactcgattcgataattaactcattgaacttggttcatgaaccaaatgagctgaacttgagcagaaaa 52934844  T
Q  231 ttaa 234  Q
    ||||    
T  52934843 ttaa 52934840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 23206317 - 23206420
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    |||||||||||||||||||||  ||||||||| |||||| |||||| ||  |  ||||||||  ||||| ||||| || |||  | ||||||| ||||||    
T  23206317 caatgaaccgaaccaactcgattatagttcgacattcgacttgatatttaatctgttgaactttgttcatgaacctaacgagctggacttgagctgaaaa 23206416  T
Q  231 ttaa 234  Q
    ||||    
T  23206417 ttaa 23206420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 39942809 - 39942912
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    |||||||| ||||||||||||  ||||||||| |||||||| |  ||||  |  |||||||| |||||| ||||  ||||||  ||||||||| ||||||    
T  39942809 caatgaactgaaccaactcgagtatagttcgaaattcgattcggcaattaatctgttgaacttggttcatgaacttaatgagctgaacttgagctgaaaa 39942908  T
Q  231 ttaa 234  Q
    ||||    
T  39942909 ttaa 39942912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 234
Target Start/End: Complemental strand, 31589747 - 31589650
Alignment:
Q  137 accgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaattaa 234  Q
    ||||||||||||| |||||| ||| | ||| |||| | ||||   ||| ||| ||| ||||||  |||||||| |||| |||||||||||||||||||    
T  31589747 accgaaccaactccaaaataattcaaaatttgattcggtaatcaattcattggacttggttcataaaccaaataagtcaaacttgagttgaaaattaa 31589650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 40459061 - 40458949
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| ||||||||||||||||||| |||||||||| |||| ||||||  |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  40459061 tagggctgacaatgaaccgaaccaacttgaaaatagtttgatactcgattcaataattggtttgttgaacttggttcacgaaccaaatgagtcgaacttg 40458962  T
Q  222 agttgaaaattaa 234  Q
    |||||||||||||    
T  40458961 agttgaaaattaa 40458949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 125 - 234
Target Start/End: Original strand, 11006977 - 11007084
Alignment:
Q  125 ggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagt 224  Q
    |||| |||||||||||||||||||||||||||||| ||   |||||  |||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  11006977 ggctgacaatgaaccgaaccaactcgaaaatagtttgac--tcgatccgataattgattcgttgaacttggttcacgaaccaaatgagtcgaacttgagt 11007074  T
Q  225 tgaaaattaa 234  Q
    ||||||||||    
T  11007075 tgaaaattaa 11007084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 121 - 234
Target Start/End: Original strand, 27464571 - 27464684
Alignment:
Q  121 atagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaactt 220  Q
    |||||||| ||||||||||||||||||||||||||||||||| | | |||| |||||||| || |||||| | |||||| ||||||||||||||||||||    
T  27464571 atagggctgacaatgaaccgaaccaactcgaaaatagttcgagacttgattcgataattgatttgttgaatttggttcatgaaccaaatgagtcgaactt 27464670  T
Q  221 gagttgaaaattaa 234  Q
    || |||||||||||    
T  27464671 gaattgaaaattaa 27464684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 218
Target Start/End: Complemental strand, 29807046 - 29806950
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaac 218  Q
    |||||||  |||||||||||||||| ||||||||||||| | | |||||| |||||||| ||||||||||| |||| |||||||||||||| |||||    
T  29807046 tagggctggcaatgaaccgaaccaattcgaaaatagttcaagactcgattcgataattgattcgttgaacttggtttacgaaccaaatgagccgaac 29806950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 10412570 - 10412468
Alignment:
Q  132 aatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaat 231  Q
    |||||||| |||||||||||||||||||||| |||||||| | ||||| ||||||| || |||||||   ||| | |||||||||||||||||| |||||    
T  10412570 aatgaaccaaaccaactcgaaaatagttcgagattcgattcggtaattagttcgttaaattcggttcgtaaactagatgagtcgaacttgagttaaaaat 10412471  T
Q  232 taa 234  Q
    |||    
T  10412470 taa 10412468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 3409188 - 3409300
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  ||||||||||||||||||||| |||||||||| | |||||| || ||||   |||||||||| |||||| |||||||||||   |||||||    
T  3409188 tagggctggcaatgaaccgaaccaactcgacaatagttcgaaactcgattcgacaattaactcgttgaacttggttcatgaaccaaatgaactgaacttg 3409287  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  3409288 agctgaaaattaa 3409300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 13830018 - 13829906
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| ||| ||| |||||| ||||| ||||||  | |||| |||||| |||||||| ||||||||||| ||||||  |||||||||||| |||||||    
T  13830018 tagggctgacattgagccgaacaaactcaaaaataacttgataatcgattcgataattgattcgttgaacttggttcataaaccaaatgagttgaacttg 13829919  T
Q  222 agttgaaaattaa 234  Q
    |||| ||||||||    
T  13829918 agttaaaaattaa 13829906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 234
Target Start/End: Original strand, 24844674 - 24844778
Alignment:
Q  130 acaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaa 229  Q
    ||||||| |||||||||||||| |||||||||| | |||||| |  ||||   |||||||||| |||||| ||||||||||||  ||||||||| |||||    
T  24844674 acaatgatccgaaccaactcgataatagttcgaaactcgattcggcaattatctcgttgaacttggttcatgaaccaaatgagctgaacttgagctgaaa 24844773  T
Q  230 attaa 234  Q
    |||||    
T  24844774 attaa 24844778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 233
Target Start/End: Original strand, 20203714 - 20203825
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||| ||||||||||||||||  | ||||||  ||||||||  | ||||| ||||||||||| |||||| |||||||||||||| ||| ||    
T  20203714 tagggctagcaattaaccgaaccaactcgattaaagttcgtaattcgattcaacaattgattcgttgaacttggttcatgaaccaaatgagtcaaacctg 20203813  T
Q  222 agttgaaaatta 233  Q
    || |||||||||    
T  20203814 agctgaaaatta 20203825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 30713287 - 30713184
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    |||||||||||||||||||||  |  |||||  |||||||| |||||||| ||||| ||||| |||||| |||||||||||| ||||| |||| |||||     
T  30713287 caatgaaccgaaccaactcgattagtgttcgtaattcgattcgataattgattcgtcgaacttggttcatgaaccaaatgagccgaacatgagctgaaat 30713188  T
Q  231 ttaa 234  Q
    ||||    
T  30713187 ttaa 30713184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 11028048 - 11027948
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  ||||||||||||||||||| |  | ||||||  |||| ||| |||||||| ||||| ||||| |||||| |||||||||||| ||||||||    
T  11028048 tagggctggcaatgaaccgaaccaactcaattagagttcgtaattcaattcgataattgattcgtcgaacttggttcatgaaccaaatgagccgaacttg 11027949  T
Q  222 a 222  Q
    |    
T  11027948 a 11027948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 27902439 - 27902551
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| ||| ||||||||||||||||||  | ||||||  | |||||| || ||||| ||||| ||||| |||||| |||| ||||||  ||||||||    
T  27902439 tagggctgacattgaaccgaaccaactcgattaaagttcgtaaatcgattcgacaattgattcgtcgaacttggttcatgaacaaaatgaaccgaacttg 27902538  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  27902539 agctgaaaattaa 27902551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 28968960 - 28968848
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| |||||||||| || |||| ||| ||||||| || | |||||| |||||||   |||||||| || ||||  |||||||||||||| || |||    
T  28968960 tagggctgacaatgaaccaaatcaacccgagaatagtttgagactcgattcgataattaactcgttgaattcagttcgtgaaccaaatgagtcaaatttg 28968861  T
Q  222 agttgaaaattaa 234  Q
    |||||||||||||    
T  28968860 agttgaaaattaa 28968848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 34116182 - 34116285
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    |||||| ||||||||||||||  | ||||||  ||||||||| ||||||| || || |||||  ||||| |||||||||||| |||||||||| | ||||    
T  34116182 caatgagccgaaccaactcgattagagttcgtaattcgatttaataattgatttgtcgaacttagttcatgaaccaaatgagccgaacttgagcttaaaa 34116281  T
Q  231 ttaa 234  Q
    ||||    
T  34116282 ttaa 34116285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 234
Target Start/End: Complemental strand, 36538797 - 36538684
Alignment:
Q  121 atagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaactt 220  Q
    |||||||| |||||||||| |||||||||||  ||||||||| |||||| | ||||  |  | ||||||||| |||||| ||||| || |||| | ||||    
T  36538797 atagggctgacaatgaaccaaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagttggactt 36538698  T
Q  221 gagttgaaaattaa 234  Q
    ||| ||||||||||    
T  36538697 gagctgaaaattaa 36538684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 234
Target Start/End: Complemental strand, 1094525 - 1094485
Alignment:
Q  194 ggttcacgaaccaaatgagtcgaacttgagttgaaaattaa 234  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  1094525 ggttcatgaaccaaatgagtcgaacttgagttgaaaattaa 1094485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 234
Target Start/End: Original strand, 32713013 - 32713109
Alignment:
Q  139 cgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttg-aactcggttcacgaaccaaatgagtcgaacttgagttgaaaattaa 234  Q
    ||||| ||||||||||||  || |||||| ||||||||| || ||||||| |||| | |||| |||||||||||||||||| |  ||||||||||||    
T  32713013 cgaacaaactcgaaaataactcaatattcaatttgataaatgattcgttgaaacttgattcatgaaccaaatgagtcgaacatatgttgaaaattaa 32713109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 41332362 - 41332259
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    ||||||||| |||||||||||| ||||||||| | |||||| || ||||   | |||||||| ||||||  |||||| ||||| ||| ||||| ||||||    
T  41332362 caatgaaccaaaccaactcgaatatagttcgaaactcgattcgacaattaacttgttgaacttggttcataaaccaattgagttgaatttgagctgaaaa 41332263  T
Q  231 ttaa 234  Q
    ||||    
T  41332262 ttaa 41332259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 44740492 - 44740595
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    ||||||||||||||||||||| ||||||| |  | |||||| || ||||   |||||||||| |||||| |||||||| |||  ||||||||| | ||||    
T  44740492 caatgaaccgaaccaactcgacaatagtttgggactcgattcgacaattaactcgttgaacttggttcatgaaccaaacgagctgaacttgagctaaaaa 44740591  T
Q  231 ttaa 234  Q
    ||||    
T  44740592 ttaa 44740595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 17616397 - 17616295
Alignment:
Q  132 aatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaat 231  Q
    |||||| ||||||||||||||||||||| || | |||||| || ||||   |||||||| | | | || |||||||||||| |||||||||| | |||||    
T  17616397 aatgaatcgaaccaactcgaaaatagttagaaactcgattcgacaattatctcgttgaatttgatacatgaaccaaatgagccgaacttgagctaaaaat 17616298  T
Q  232 taa 234  Q
    |||    
T  17616297 taa 17616295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 38409613 - 38409683
Alignment:
Q  164 attcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaattaa 234  Q
    |||||||| || ||||| ||||| ||| | |||||| |||||||||||| |||||||||| ||||||||||    
T  38409613 attcgattcgacaattgattcgtcgaatttggttcatgaaccaaatgagccgaacttgagctgaaaattaa 38409683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 16544138 - 16544034
Alignment:
Q  130 acaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaa 229  Q
    ||||||||||||| ||||||| ||| ||||| | | |||||| ||||||   || |||||||| ||||||| |||||||| | | ||| ||||||| |||    
T  16544138 acaatgaaccgaagcaactcggaaaaagttcaagactcgattcgataatgtatttgttgaacttggttcaccaaccaaataatttgaatttgagttaaaa 16544039  T
Q  230 attaa 234  Q
    |||||    
T  16544038 attaa 16544034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 27634811 - 27634699
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||||||||||||||||  ||||||||| |||||| | |||| ||  | |||||||||  ||||| ||||| || |||  | |||||    
T  27634811 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttagttcatgaacctaacgagctggacttg 27634712  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  27634711 agctgaaaattaa 27634699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 2647027 - 2647086
Alignment:
Q  175 taattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaattaa 234  Q
    ||||| |||||||||||| |||||| |||||||| ||| |||||||||| | ||||||||    
T  2647027 taattagttcgttgaacttggttcatgaaccaaacgagccgaacttgagctaaaaattaa 2647086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 190
Target Start/End: Complemental strand, 40680340 - 40680281
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaa 190  Q
    ||||||||||||||||||| | |||||||||  |||||||| ||||||||  ||||||||    
T  40680340 caatgaaccgaaccaactcaataatagttcggaattcgattcgataattgactcgttgaa 40680281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 9753238 - 9753156
Alignment:
Q  130 acaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgag 212  Q
    |||||||||||| |||| ||||| | ||||||| |||||||| || ||||| |||||| |  | |||||| ||||||||||||    
T  9753238 acaatgaaccgagccaagtcgaacaaagttcgagattcgattcgacaattgattcgttaagtttggttcatgaaccaaatgag 9753156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 234
Target Start/End: Complemental strand, 41959284 - 41959171
Alignment:
Q  121 atagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaactt 220  Q
    |||||||| ||||||||||||| ||||||||  ||||||||| |||||| | ||||  |  | ||||||||| | |||| ||||| || |||  | ||||    
T  41959284 atagggctgacaatgaaccgaatcaactcgattatagttcgacattcgactcgatatctaatccgttgaacttgattcatgaacctaacgagctggactt 41959185  T
Q  221 gagttgaaaattaa 234  Q
    ||| ||||||||||    
T  41959184 gagctgaaaattaa 41959171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 33831635 - 33831523
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||||||||||||||||  ||||||||| |||||| | ||||  |  | ||||||| | |||||| ||||| || |||  | |||||    
T  33831635 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaatttggttcatgaacctaacgagctggacttg 33831536  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  33831535 agctgaaaattaa 33831523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 121 - 234
Target Start/End: Complemental strand, 21228 - 21116
Alignment:
Q  121 atagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaactt 220  Q
    |||||||| ||||||||||||||||||||||||||||||||| | |||||| |||||||| ||||||||||| |||||| |||||||| |||||||||||    
T  21228 atagggctgacaatgaaccgaaccaactcgaaaatagttcgagactcgattcgataattgattcgttgaacttggttcatgaaccaaa-gagtcgaactt 21130  T
Q  221 gagttgaaaattaa 234  Q
    ||||||||||||||    
T  21129 gagttgaaaattaa 21116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 32794 - 32895
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    |||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||| |||||||  |||||||||||||||||||||||| |||    
T  32794 caatgaaccgaaccaactcgaaaatagttcgatactcgattcgacaattggttcgttgaacttggttcac--accaaatgagtcgaacttgagttgtaaa 32891  T
Q  231 ttaa 234  Q
    ||||    
T  32892 ttaa 32895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 1e-28; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 39478190 - 39478090
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||| ||| |||||| ||||||||||||| |||||||    
T  39478190 tagggctggcaatgaaccgaaccaactcgaaaatagttcgatactcgattcgataattggttcattggacttggttcatgaaccaaatgagttgaacttg 39478091  T
Q  222 a 222  Q
    |    
T  39478090 a 39478090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 43384925 - 43384833
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgag 223  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||  ||||||||| | |||||| ||||||||||||| |||||||||    
T  43384925 caatgaaccgaaccaactcgaaaatagttcgagattcgattcgataattaattcgttgaagttggttcatgaaccaaatgagttgaacttgag 43384833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 12378484 - 12378391
Alignment:
Q  130 acaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgag 223  Q
    |||||||||||||| ||||| |||||||| ||| ||||| || |||||||| ||||||||||| |||||||||||||||||||| |||||||||    
T  12378484 acaatgaaccgaacaaactcaaaaatagtccgagattcggttcgataattgattcgttgaacttggttcacgaaccaaatgagttgaacttgag 12378391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 27189082 - 27189194
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||||  ||||||||||| ||||||||  | ||||||  ||| |||| |||||||| ||||| ||||| |||||| |||||||||||||||||||||    
T  27189082 tagggctcctaatgaaccgaatcaactcgattagagttcgtaattagattcgataattgattcgtcgaacttggttcatgaaccaaatgagtcgaacttg 27189181  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  27189182 agctgaaaattaa 27189194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 234
Target Start/End: Complemental strand, 22564133 - 22564034
Alignment:
Q  135 gaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaattaa 234  Q
    ||||||| |||||||||||||| || || ||| |||| | |||||| ||||||||||| |||||| ||||||||| | ||||||||||||||||||||||    
T  22564133 gaaccgatccaactcgaaaataatttgaaatttgattcggtaattgtttcgttgaacttggttcatgaaccaaataaatcgaacttgagttgaaaattaa 22564034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 234
Target Start/End: Original strand, 33279976 - 33280089
Alignment:
Q  121 atagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaactt 220  Q
    |||||||| ||||||||||||||||||||||  | ||||||  ||| |||| |||||||| ||||| ||||| |||||| |||||||||||| ||||  |    
T  33279976 atagggctgacaatgaaccgaaccaactcgattaaagttcgtaatttgattcgataattgattcgtcgaacttggttcatgaaccaaatgagccgaatat 33280075  T
Q  221 gagttgaaaattaa 234  Q
    ||| | ||||||||    
T  33280076 gagcttaaaattaa 33280089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 1091857 - 1091755
Alignment:
Q  132 aatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaat 231  Q
    ||||||| |||| ||||| ||||||||| || | |||||| |||||||  ||||||||||| | |||| |||||||| ||||||||| |||||| |||||    
T  1091857 aatgaactgaacaaactcaaaaatagtttgagactcgattcgataattaattcgttgaacttgattcatgaaccaaacgagtcgaacctgagtttaaaat 1091758  T
Q  232 taa 234  Q
    |||    
T  1091757 taa 1091755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 3308074 - 3307962
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  ||||||||||||||||||||| |||||||||  | |||||| || ||||   |||| |||||  ||||| |||||||||||| ||||||||    
T  3308074 tagggctggcaatgaaccgaaccaactcgacaatagttcggaactcgattcgacaattaactcgtagaacttagttcatgaaccaaatgagccgaacttg 3307975  T
Q  222 agttgaaaattaa 234  Q
    ||  |||||||||    
T  3307974 agcagaaaattaa 3307962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 453623 - 453511
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    |||||||  |||||||||||||||||||||  ||||||||| |||||| | ||||  |  | ||||||||| |||||| ||||| || |||  | |||||    
T  453623 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggacttg 453524  T
Q  222 agttgaaaattaa 234  Q
    |||||||||||||    
T  453523 agttgaaaattaa 453511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 234
Target Start/End: Complemental strand, 34516274 - 34516166
Alignment:
Q  126 gctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagtt 225  Q
    |||| ||||||||||||||||||| |  | ||||||  |||| ||| || ||||| ||| ||||||| | ||||  ||||||||||| |||||||||| |    
T  34516274 gctcgcaatgaaccgaaccaactcaattaaagttcgtaattcaattcgacaattgattcattgaacttgattcatcaaccaaatgagccgaacttgagct 34516175  T
Q  226 gaaaattaa 234  Q
    |||||||||    
T  34516174 gaaaattaa 34516166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 9412585 - 9412636
Alignment:
Q  183 tcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaattaa 234  Q
    |||||||||| |||||| ||||||||||||  ||||||||||||| ||||||    
T  9412585 tcgttgaacttggttcatgaaccaaatgagctgaacttgagttgagaattaa 9412636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 34655177 - 34655074
Alignment:
Q  120 aatagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaact 219  Q
    |||||||||  |||||||||||  ||||||||| | ||||||  | |||| | | ||||| ||| ||||||||  ||||| |||||||| ||||||||||    
T  34655177 aatagggctggcaatgaaccgatacaactcgaataaagttcggaactcgactcggtaattagtttgttgaacttagttcatgaaccaaacgagtcgaact 34655078  T
Q  220 tgag 223  Q
    ||||    
T  34655077 tgag 34655074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 234
Target Start/End: Complemental strand, 23181251 - 23181183
Alignment:
Q  166 tcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaattaa 234  Q
    |||||| || ||||| ||||| ||| | |||||| |||||||||||| |||||||||  ||||||||||    
T  23181251 tcgattcgacaattgattcgtcgaatttggttcatgaaccaaatgagccgaacttgaactgaaaattaa 23181183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 14566 - 14454
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| |||||||||||||||||| |||||||||||||| | |||||| | |||||| ||| ||||||| |||||| ||||||||||| | |||||||    
T  14566 tagggctgacaatgaaccgaaccaacccgaaaatagttcgaaactcgattcggtaattgattcattgaacttggttcatgaaccaaatgatttgaacttg 14467  T
Q  222 agttgaaaattaa 234  Q
    ||| |||||||||    
T  14466 agtcgaaaattaa 14454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 124490 - 124582
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgag 223  Q
    |||||||||||||||||||||| ||||||||| ||| || | || ||||||| | ||||||| |||||| |||||||||||||||||||||||    
T  124490 caatgaaccgaaccaactcgaatatagttcgaaatttgactcgacaattggtccattgaacttggttcatgaaccaaatgagtcgaacttgag 124582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 7317 - 7420
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    |||||||||||||||| ||||  |  |||||  |||||||| |||||||| ||||| ||||| |||||| |||||||||||| |||||||||| ||||||    
T  7317 caatgaaccgaaccaattcgattagtgttcgtaattcgattcgataattgattcgtcgaacttggttcatgaaccaaatgagccgaacttgagctgaaaa 7416  T
Q  231 ttaa 234  Q
    ||||    
T  7417 ttaa 7420  T

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Target: scaffold0204 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 26621 - 26733
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttg 221  Q
    ||||||| |||||||| ||||||||||| |  | ||||||  |||||||| || || || || |||||||| |||||| ||| |||||||||||||||||    
T  26621 tagggctgacaatgaatcgaaccaactcaattagagttcgtaattcgattcgacaactgatttgttgaacttggttcatgaatcaaatgagtcgaacttg 26720  T
Q  222 agttgaaaattaa 234  Q
    || ||||||||||    
T  26721 agctgaaaattaa 26733  T

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Target: scaffold0063 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 51311 - 51414
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    ||||||||||||| | |||||||||||||||| ||||| || | ||| |  |||||||||||  ||||  |||||||||||||||||| ||| || ||||    
T  51311 caatgaaccgaactagctcgaaaatagttcgagattcggttcggtaaataattcgttgaacttagttcgtgaaccaaatgagtcgaacgtgattttaaaa 51410  T
Q  231 ttaa 234  Q
    ||||    
T  51411 ttaa 51414  T

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Target: scaffold0260 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 11600 - 11497
Alignment:
Q  131 caatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaa 230  Q
    |||||||||||||||||||||| ||||||  | ||| || | |||||||  ||||||||||| | ||||   |||||||||| ||||||| || ||||||    
T  11600 caatgaaccgaaccaactcgaacatagtttaaaatttgactcgataattaattcgttgaacttgattcatataccaaatgagccgaacttcagatgaaaa 11501  T
Q  231 ttaa 234  Q
    ||||    
T  11500 ttaa 11497  T

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Target: scaffold0025 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 234
Target Start/End: Complemental strand, 11531 - 11418
Alignment:
Q  121 atagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgatttgataattggttcgttgaactcggttcacgaaccaaatgagtcgaactt 220  Q
    ||||| || |||||||||||||||||||||| ||||||| |  | |||||| || ||||   |||| |||||  ||||| ||||||||||||  ||||||    
T  11531 ataggactgacaatgaaccgaaccaactcgataatagtttggaactcgattcgacaattacctcgtcgaacttagttcatgaaccaaatgaggtgaactt 11432  T
Q  221 gagttgaaaattaa 234  Q
     |||| ||||||||    
T  11431 aagttaaaaattaa 11418  T

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Target: scaffold0444 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 827 - 879
Alignment:
Q  182 ttcgttgaactcggttcacgaaccaaatgagtcgaacttgagttgaaaattaa 234  Q
    ||||||||||| |||||| ||||||||||||| ||| ||| ||||||||||||    
T  827 ttcgttgaacttggttcatgaaccaaatgagttgaatttgggttgaaaattaa 879  T

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Target: scaffold1787 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1787
Description:

Target: scaffold1787; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 137 - 87
Alignment:
Q  122 tagggctcacaatgaaccgaaccaactcgaaaatagttcgatattcgattt 172  Q
    ||||||||||||||||||||| ||| |||| ||||||| || |||||||||    
T  137 tagggctcacaatgaaccgaatcaattcgataatagtttgaaattcgattt 87  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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