View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17496_low_20 (Length: 329)
Name: NF17496_low_20
Description: NF17496
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17496_low_20 |
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Alignment Details
Target: chr4 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 37 - 281
Target Start/End: Complemental strand, 36628019 - 36627775
Alignment:
| Q |
37 |
tagtaaaactttttatgtgattttgaattaaatctctaactatacgatttgcaaataataaaattgttatcaaattgctgttagctagatgtgatgtaag |
136 |
Q |
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| T |
36628019 |
tagtaaaactttttatgtgatgttgaattaaatctctaactatacgatttgcaaataataaaattgttatcaaattgctgttagctagatgtgatgtaag |
36627920 |
T |
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| Q |
137 |
gaaagcgagaactcagaattgaaatggggagaagaaggagaaagaataatcgcagtacaaagaaagacaccacacacattcaaatttaattttttatttt |
236 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||| |
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| T |
36627919 |
gaaagcgagaactcagaattgaaatggggagaagaaggagaaagaataattgcagtacaaagaaagacaccacacacatacaaattttattttttatttt |
36627820 |
T |
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| Q |
237 |
aaaccgttaagattgatcaaagggttactgattaaccctctcata |
281 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36627819 |
aaaccgttaagattgatcaaagggttactgattaaccctctcata |
36627775 |
T |
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