View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17496_low_31 (Length: 274)
Name: NF17496_low_31
Description: NF17496
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17496_low_31 |
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Alignment Details
Target: chr2 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 16 - 260
Target Start/End: Original strand, 8744012 - 8744256
Alignment:
| Q |
16 |
aacaagatgtttgtacctggtatgtttacaacttcaattttgtacttactaggttgtgatttgtgatatttcatggtatatagattattatcaataattg |
115 |
Q |
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| T |
8744012 |
aacaagatgtttgtacctggtatgtttacaacttcaattttgtacttactaggttgtgatttgtgatatttcatggtatatagattattatcaataattg |
8744111 |
T |
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| Q |
116 |
tgtaccatgttatgttatctttgatgcaggattcggagaagcaacacctgaagcaaaggctgccaaaaacctacataatttcttcacctacactgcagtt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8744112 |
tgtaccatgttatgttatctttgatgcaggattcggagaagcaacacctgaagcaaaggctgccaaaaacctacataatttcttcacctacactgcagtt |
8744211 |
T |
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| Q |
216 |
aaaattgttgcttctcaacttgaggtgcctcccatctttgttgat |
260 |
Q |
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| T |
8744212 |
aaaattgttgcttctcaacttgaggtgcctcccatctttgttgat |
8744256 |
T |
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