View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17497_high_2 (Length: 288)
Name: NF17497_high_2
Description: NF17497
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17497_high_2 |
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Alignment Details
Target: chr3 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 20 - 275
Target Start/End: Original strand, 47782496 - 47782751
Alignment:
| Q |
20 |
ttttggtgcaaatgcaattttctatctttgtgagccagacgcaaagttgagcacccgctcaaagtttcaagtaattaaagaggacacgagaatatgacat |
119 |
Q |
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| T |
47782496 |
ttttggtgcaaatgcaattttctatctttgtgagccagacgcaaagttgagcacccgctcaaagtttcaagtaattaaagaggacacgagaatatgacat |
47782595 |
T |
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| Q |
120 |
tccagctaaagtggtaaatataccaccaaatatgactattgtttgcatggaccatttttgatgccaccaaatttgatgcaagtgttgtgtgctaccggcc |
219 |
Q |
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| T |
47782596 |
tccagctaaagtggtaaatataccaccaaatatgactattgtttgcatggaccattttttatgccaccaaatttgatgcaagtgttgtgtgctaccggcc |
47782695 |
T |
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| Q |
220 |
ggaaagaatatagcatatatctaggacacccatatgtaatgctatatcctttgata |
275 |
Q |
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| T |
47782696 |
ggaaagaatatagcatatatctaggacatccatatgtaatgctatatcctttgata |
47782751 |
T |
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