View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17498_low_10 (Length: 298)
Name: NF17498_low_10
Description: NF17498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17498_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 138; Significance: 4e-72; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 139 - 280
Target Start/End: Original strand, 43094182 - 43094323
Alignment:
| Q |
139 |
agttcttcattcacattctcattccaactattagtatcccaacctttgctatctccatcaacatcaaccctttcttcaccctcaacaaattcttcatttt |
238 |
Q |
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| T |
43094182 |
agttcttcattcacattctcattccaactattagtatcccaacctttgctatctccatcaacatcaaccctttcttcaccctcaacaaattcttcatttt |
43094281 |
T |
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| Q |
239 |
cacccttcacagattcttcttcatcgaccttttcacccttca |
280 |
Q |
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||||||||||||||||||||||||||||||||||||| |||| |
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| T |
43094282 |
cacccttcacagattcttcttcatcgaccttttcacctttca |
43094323 |
T |
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