View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17499_high_18 (Length: 209)
Name: NF17499_high_18
Description: NF17499
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17499_high_18 |
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Alignment Details
Target: chr7 (Bit Score: 159; Significance: 7e-85; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 43074444 - 43074262
Alignment:
| Q |
20 |
aatccatttgctgcacatcatccatgttggttttcaattataaccatcaatgttatgtcaactaaattgagaagcttgacgtgaatacataacaccttaa |
119 |
Q |
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| T |
43074444 |
aatccatttgatgcacatcatccatgttggttttcaattataaccatcaatgttatgtcaattaaattgagaagcttgacgtgaatacataacaccttaa |
43074345 |
T |
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| Q |
120 |
ttacgagtagaggtacatattgttcctaagtttaagtataggttggagaagtgagttcaacattttcgatttgatgatgatgt |
202 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| | |||||||||||| |
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| T |
43074344 |
ttacgagtagaggtacatattgttcctaggtttaagtataggttggagatgtgagttcaacattttcggtctgatgatgatgt |
43074262 |
T |
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