View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17502_low_10 (Length: 329)
Name: NF17502_low_10
Description: NF17502
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17502_low_10 |
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Alignment Details
Target: chr3 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 6 - 324
Target Start/End: Original strand, 38724012 - 38724330
Alignment:
| Q |
6 |
tgaagatgatactgattgaattttaattgtgtttttgttatatgcatgcatagattgtggagtttgttcgtaatggtgataagactgtttcagagctaat |
105 |
Q |
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| T |
38724012 |
tgaagatgatactgattgaattttaattgtgtttttgttatatgcatgcatagattgtggagtttgttcgtaatggggataagactgtttcagagctaat |
38724111 |
T |
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| Q |
106 |
gtctattgggagagaactattaggaaggtataattatgctctcattttcatcatctgattctgttttgacttttgaccttccttgatcaaaagttttgta |
205 |
Q |
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| T |
38724112 |
gtctattgggagagaactattaggaaggtataattatgctctcattttcatcatctgattctgttttgacttttgaccttccttgatcaaaagttttgta |
38724211 |
T |
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| Q |
206 |
tcttaaattgttactctcagaatgatttggttattgaaattaaaatctatattagttgaagagaattttatgaataacatcattaagtagggtaaattag |
305 |
Q |
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| T |
38724212 |
tcttaaattgttactctcagaatgatttggttattgaaattaaaatctatattagttgaagagaattttatgaataacatcattaagtagggtaaattag |
38724311 |
T |
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| Q |
306 |
ttcagttctacttagattt |
324 |
Q |
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||||||| ||||||||||| |
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| T |
38724312 |
ttcagttttacttagattt |
38724330 |
T |
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