View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17502_low_17 (Length: 267)
Name: NF17502_low_17
Description: NF17502
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17502_low_17 |
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Alignment Details
Target: chr1 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 16 - 235
Target Start/End: Original strand, 7439633 - 7439852
Alignment:
| Q |
16 |
ctttcttcaattagcttattatttaatacagcaaaactcaatctccaacataatgaagctccaatcagataaaaaattcatgacttttaccaccatacta |
115 |
Q |
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| T |
7439633 |
ctttcttcaattagcttattatttaatacagcaaaactcaatctccaacataatgaagctccaatcagataaaaaattcatgacttttaccaccatacta |
7439732 |
T |
|
| Q |
116 |
gcattttttgaatgacccctcaactcaactaaaactcaactttttcatccttctgggttctggctatttcaaacagccactaggtaaattagtgattatg |
215 |
Q |
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||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7439733 |
tcatgttttgaatgacccctcaactcaactaaaactcaactttttcatccttctgggttctggctatttcaaacagccactaggtaaattagtgattatg |
7439832 |
T |
|
| Q |
216 |
ccacttccactttctttttc |
235 |
Q |
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|||||||||||||||||||| |
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| T |
7439833 |
ccacttccactttctttttc |
7439852 |
T |
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