View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17502_low_21 (Length: 248)
Name: NF17502_low_21
Description: NF17502
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17502_low_21 |
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Alignment Details
Target: chr5 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 40262091 - 40262319
Alignment:
| Q |
1 |
tagattatacttaatctaaaaaagtaaaatatttggctatgaagctcaaaagttttctcacgactcaataatatcttaatatattattcataatgactta |
100 |
Q |
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||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40262091 |
tagatcatacttaatctaaaa--gtaaaatatttggctatgaagctcaaaagttttctcacgactcaataatatcttaatatattattcataatgactta |
40262188 |
T |
|
| Q |
101 |
atgactcaaaagttttcttatgtataactaaaaatattttaatccttacctctgtagccatgcgacctttctgatgatctgaaccgatcatagtcttgta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40262189 |
atgactcaaaagttttcttatgtataactaaaaatattttaatccttacctctgtagccatgcgacctttctgatgatctgaaccgatcatagtcttgta |
40262288 |
T |
|
| Q |
201 |
cagtacattggttgaaaagcgaggacattct |
231 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
40262289 |
cagtacattggttgaaaagcgaggacattct |
40262319 |
T |
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