View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17505_high_8 (Length: 373)
Name: NF17505_high_8
Description: NF17505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17505_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 318
Target Start/End: Original strand, 7119100 - 7119417
Alignment:
| Q |
1 |
ctatcattttggagacttggtaaggaatgactgaatgaggcnnnnnnnnnnnnntagaataagacttttagcataaaaagatttgcttcagaatctgcaa |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
7119100 |
ctatcattttggagacttggtaaggaatgactgaatgaggcaaaaaagtaaaaatagaataagacttttagcatgaaaagatttgcttcagaatctgcaa |
7119199 |
T |
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| Q |
101 |
atccataggaggatggaatccaatgcaaatatctcagaaccccttgcacatacaccattacgcgggaccaatatattttgatttgagtctctgaaggtgt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
7119200 |
atccataggaggatggaatccaatgcaaatatctcagaaccccttgcacatacaccattacgcaggaccaatatattttgatttgagtctctgaaggtgt |
7119299 |
T |
|
| Q |
201 |
agtccaatggtataggttggaaatcctacttagaattaagaagtccaagttcgatccctgctgctaacaacttcctcctccccaaacaaattaaccgcaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7119300 |
agtccaatggtataggttggaaatcctacttagaattaagaagtccaagttcgatccctgctgctaacaacttcctcctccccaaacaaattaaccgcaa |
7119399 |
T |
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| Q |
301 |
acatttgtctattcaaaa |
318 |
Q |
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|||||||||||||||||| |
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| T |
7119400 |
acatttgtctattcaaaa |
7119417 |
T |
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