View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17506_high_3 (Length: 356)
Name: NF17506_high_3
Description: NF17506
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17506_high_3 |
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Alignment Details
Target: chr2 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 35 - 344
Target Start/End: Original strand, 2893462 - 2893770
Alignment:
| Q |
35 |
attgacactcactacattatcgggatacgccgtttaaccattgtattgtcaagaagaccggctacaatcgattcctctatcaaatatcaattctaatacc |
134 |
Q |
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| T |
2893462 |
attgacactcactacatcatcggaatacgccgtttaaccattgtattgtcaagaagaccggctacaatcgattcctctatcaaatatcaattctaatacc |
2893561 |
T |
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| Q |
135 |
attttgagtcacgagaagttcaatgattatcatgtttcactaaaaacaaccaaaccggttaatttctaatatcaattctaataccattgacgcacacata |
234 |
Q |
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| T |
2893562 |
attttgagttaggagaagttcaatgattatcatgtttcactaaaaacaaccaaaccggttaatttctaatatcaattctaataccattgacgcacacata |
2893661 |
T |
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| Q |
235 |
ctttgcatagcaatccatcgatttttctatccattattgcacttctaactcatacaccccaaaacatattgattccgatatactactccatccgtctcaa |
334 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||| |
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| T |
2893662 |
ctttgcatagcaatccatcaatttttctatccattattgcacttctaactcatacaccccaaaacatattgattccgatatactattccattcgt-tcaa |
2893760 |
T |
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| Q |
335 |
attatatgat |
344 |
Q |
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| T |
2893761 |
attgtatgat |
2893770 |
T |
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