View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17508_low_9 (Length: 263)
Name: NF17508_low_9
Description: NF17508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17508_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 48347872 - 48348104
Alignment:
| Q |
18 |
catggtaattggatcaggaccaaaccgatccgttgagcccaatatcaaatccatagccttcaccgccttcaccttctgatcctccaccaccggaatgacg |
117 |
Q |
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| T |
48347872 |
catggtaattggatcaggaccaaaccgatccgttgagcccaataccaaatccatagccttcaccgccttcaccttctgatcctccgccaccggaacaacg |
48347971 |
T |
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| Q |
118 |
atctccggactcaatttctcgcctcttttgagaatcttaacttgtcccataacaagcttcgtcggcgccaccgtacgatcaacggattgtttccgatcat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48347972 |
atctccggactcaatttctcgcctcttttgagaatcttaacttgtcccataacaagcttcgtcggcgccaccgtacgatcaacggattgtttccgatcat |
48348071 |
T |
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| Q |
218 |
gttgatttgattgaccggtggtgactggacttc |
250 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
48348072 |
gttgatttgattgaccggtggtgactggacttc |
48348104 |
T |
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