View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1750_low_10 (Length: 358)
Name: NF1750_low_10
Description: NF1750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1750_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 10 - 342
Target Start/End: Original strand, 26047459 - 26047794
Alignment:
| Q |
10 |
gcagagattgggaaatagagaagaaagcgaggggtaaaacgggaatagtgcatggtttggtttgttttctgagtccgtgactcggagatggtggtgttta |
109 |
Q |
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| T |
26047459 |
gcagagattgggaaatggagaagaaagcgagggttaaaacgggaataatgcatggtttggtatgttttctgagtccgtgacccggtgatggtggtgttta |
26047558 |
T |
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| Q |
110 |
gattagaggtaggagaataataaaagggattggtgagtggtgaccggttaccggaaggagcggtggtgaatagc-------gaaagtggaaagtgaaaag |
202 |
Q |
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| T |
26047559 |
gtttagaagcaggagaataataaaagggattggtgagtggtgaccagttaccggaaggagcggtggtgaatagcgaaagtggaaagtggaaagtgaaaag |
26047658 |
T |
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| Q |
203 |
tgaagcggattgtgatgcgtggatgaaggggtctgatttctttcttattatagtggacaaagtttcctaatttacgaggttcaatctcttgcaaagtttg |
302 |
Q |
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| T |
26047659 |
tgaagcggattgtgatgcgtggatgaaggagtctaatctctttcttattcta----acaaagtttcctaatttacgaggtgatatctcttgcagagtttg |
26047754 |
T |
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| Q |
303 |
aggaaatatatcaatttctatcttttatttattaaaagat |
342 |
Q |
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| T |
26047755 |
aggaaatatatcaatttctatcttttatttattaaaagat |
26047794 |
T |
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