View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1751-Insertion-11 (Length: 520)

Name: NF1751-Insertion-11
Description: NF1751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1751-Insertion-11
NF1751-Insertion-11
[»] chr2 (70 HSPs)
chr2 (284-520)||(41365923-41366170)
chr2 (7-196)||(41366263-41366455)
chr2 (284-445)||(9732816-9732990)
chr2 (284-445)||(2644973-2645146)
chr2 (284-445)||(6896198-6896372)
chr2 (284-449)||(38623186-38623364)
chr2 (284-339)||(42706389-42706444)
chr2 (284-445)||(37003777-37003928)
chr2 (284-445)||(7761459-7761633)
chr2 (379-449)||(11115008-11115078)
chr2 (284-449)||(33366640-33366818)
chr2 (343-449)||(39461416-39461522)
chr2 (284-445)||(9717254-9717405)
chr2 (284-450)||(37308685-37308865)
chr2 (284-339)||(17540745-17540800)
chr2 (284-339)||(19513694-19513749)
chr2 (350-445)||(34338919-34339014)
chr2 (284-339)||(35114815-35114870)
chr2 (284-450)||(38992952-38993131)
chr2 (284-336)||(3913468-3913520)
chr2 (377-449)||(10399752-10399824)
chr2 (350-454)||(42365686-42365790)
chr2 (284-339)||(1247177-1247232)
chr2 (284-339)||(5278839-5278894)
chr2 (284-339)||(7258927-7258982)
chr2 (284-339)||(18685866-18685921)
chr2 (284-339)||(26418953-26419008)
chr2 (350-445)||(30326218-30326313)
chr2 (284-339)||(32497945-32498000)
chr2 (350-445)||(32766390-32766485)
chr2 (284-339)||(33889273-33889328)
chr2 (284-339)||(40692327-40692382)
chr2 (284-339)||(40832474-40832529)
chr2 (301-412)||(45463042-45463153)
chr2 (375-445)||(13829560-13829630)
chr2 (284-445)||(44284659-44284833)
chr2 (286-339)||(4641548-4641601)
chr2 (372-449)||(16177765-16177842)
chr2 (350-443)||(37863254-37863347)
chr2 (346-445)||(7259002-7259101)
chr2 (284-339)||(11114902-11114957)
chr2 (284-339)||(12672479-12672534)
chr2 (284-339)||(16104304-16104359)
chr2 (284-339)||(16177888-16177943)
chr2 (350-445)||(18685945-18686040)
chr2 (284-339)||(26981714-26981769)
chr2 (350-445)||(30712969-30713064)
chr2 (350-445)||(30798375-30798469)
chr2 (288-339)||(30798494-30798545)
chr2 (284-339)||(34338840-34338895)
chr2 (351-445)||(28824443-28824537)
chr2 (291-339)||(8112337-8112385)
chr2 (284-339)||(32766509-32766565)
chr2 (350-445)||(2086172-2086266)
chr2 (284-339)||(12939305-12939360)
chr2 (350-433)||(19513587-19513670)
chr2 (377-436)||(26981604-26981663)
chr2 (354-445)||(27462688-27462779)
chr2 (304-339)||(27462807-27462842)
chr2 (284-339)||(28824562-28824617)
chr2 (346-445)||(32498020-32498119)
chr2 (351-445)||(40692407-40692501)
chr2 (350-447)||(83379-83476)
chr2 (284-341)||(26796258-26796315)
chr2 (284-337)||(30326338-30326391)
chr2 (340-421)||(42706458-42706539)
chr2 (302-338)||(83315-83351)
chr2 (310-342)||(130355-130387)
chr2 (350-414)||(5278751-5278815)
chr2 (372-444)||(18793180-18793252)
[»] scaffold0280 (1 HSPs)
scaffold0280 (284-445)||(13579-13753)
[»] chr4 (101 HSPs)
chr4 (284-448)||(39078694-39078871)
chr4 (284-445)||(3649669-3649843)
chr4 (284-444)||(43739494-43739644)
chr4 (284-454)||(24002372-24002555)
chr4 (284-339)||(28115285-28115340)
chr4 (350-445)||(50729421-50729516)
chr4 (284-445)||(23521913-23522087)
chr4 (284-427)||(47642388-47642544)
chr4 (284-339)||(38812553-38812608)
chr4 (284-339)||(50186561-50186616)
chr4 (284-339)||(55065331-55065386)
chr4 (284-445)||(12600919-12601093)
chr4 (284-337)||(21202772-21202825)
chr4 (284-341)||(25978607-25978664)
chr4 (286-339)||(37931955-37932008)
chr4 (284-339)||(6776611-6776666)
chr4 (284-339)||(20802529-20802584)
chr4 (284-454)||(22318254-22318437)
chr4 (284-339)||(29785535-29785590)
chr4 (284-339)||(33177030-33177085)
chr4 (284-339)||(33552840-33552895)
chr4 (284-339)||(36497250-36497305)
chr4 (284-339)||(43641132-43641187)
chr4 (284-339)||(49152098-49152153)
chr4 (350-445)||(50178371-50178466)
chr4 (284-339)||(50727911-50727966)
chr4 (284-339)||(50735925-50735980)
chr4 (284-445)||(52319356-52319535)
chr4 (284-339)||(52949753-52949808)
chr4 (284-339)||(56154654-56154709)
chr4 (284-445)||(44649043-44649217)
chr4 (284-445)||(9512219-9512393)
chr4 (284-341)||(26083372-26083429)
chr4 (286-339)||(44324340-44324393)
chr4 (350-454)||(11056154-11056258)
chr4 (287-339)||(16320555-16320607)
chr4 (284-339)||(1231344-1231399)
chr4 (350-445)||(2725012-2725107)
chr4 (284-339)||(7554955-7555010)
chr4 (284-339)||(20694404-20694459)
chr4 (284-339)||(32181296-32181351)
chr4 (284-339)||(36743686-36743741)
chr4 (284-339)||(37695539-37695594)
chr4 (284-339)||(37865786-37865841)
chr4 (350-445)||(46680389-46680484)
chr4 (284-339)||(54543023-54543077)
chr4 (352-454)||(29593009-29593111)
chr4 (284-341)||(53200639-53200697)
chr4 (350-454)||(20517891-20517996)
chr4 (372-445)||(29616300-29616373)
chr4 (284-445)||(38486136-38486310)
chr4 (350-450)||(20802405-20802505)
chr4 (284-339)||(23327951-23328007)
chr4 (350-445)||(55593997-55594093)
chr4 (346-445)||(1231419-1231518)
chr4 (284-339)||(2629949-2630004)
chr4 (284-339)||(2725131-2725185)
chr4 (284-339)||(4325824-4325879)
chr4 (350-445)||(4325903-4325998)
chr4 (378-445)||(6776718-6776785)
chr4 (302-341)||(7001903-7001942)
chr4 (284-339)||(21580059-21580114)
chr4 (284-335)||(24210352-24210403)
chr4 (350-449)||(30942901-30942999)
chr4 (284-339)||(34929948-34930003)
chr4 (284-339)||(36885965-36886020)
chr4 (350-445)||(44324221-44324316)
chr4 (300-339)||(47361411-47361450)
chr4 (354-445)||(50727792-50727883)
chr4 (354-445)||(50735806-50735897)
chr4 (346-445)||(52949828-52949927)
chr4 (284-339)||(55593918-55593973)
chr4 (350-448)||(20694483-20694581)
chr4 (351-445)||(36497330-36497424)
chr4 (297-339)||(42772834-42772876)
chr4 (372-445)||(6973792-6973865)
chr4 (284-341)||(50729538-50729595)
chr4 (350-450)||(25978486-25978585)
chr4 (378-445)||(14296707-14296774)
chr4 (378-445)||(14314955-14315022)
chr4 (284-339)||(20518020-20518075)
chr4 (346-421)||(21202847-21202922)
chr4 (350-449)||(24210431-24210530)
chr4 (284-339)||(29592928-29592983)
chr4 (351-445)||(29785415-29785510)
chr4 (350-445)||(36886044-36886139)
chr4 (346-445)||(38812628-38812727)
chr4 (284-339)||(41711880-41711935)
chr4 (284-339)||(46680508-46680563)
chr4 (378-445)||(50186668-50186735)
chr4 (298-339)||(11056089-11056130)
chr4 (284-341)||(30942821-30942878)
chr4 (301-342)||(32858372-32858413)
chr4 (372-445)||(33552721-33552794)
chr4 (284-341)||(45577688-45577745)
chr4 (284-328)||(3579157-3579201)
chr4 (346-414)||(26083447-26083515)
chr4 (350-445)||(47361292-47361388)
chr4 (284-339)||(50178490-50178546)
chr4 (377-445)||(54543128-54543195)
chr4 (346-454)||(56154729-56154837)
[»] chr8 (67 HSPs)
chr8 (284-445)||(29610956-29611130)
chr8 (288-445)||(15001500-15001670)
chr8 (284-452)||(12753219-12753400)
chr8 (284-445)||(8672956-8673130)
chr8 (284-445)||(10467094-10467268)
chr8 (284-454)||(27103989-27104172)
chr8 (285-337)||(17520626-17520678)
chr8 (350-454)||(35225771-35225875)
chr8 (284-339)||(7394834-7394889)
chr8 (284-339)||(29563246-29563301)
chr8 (284-339)||(32303605-32303660)
chr8 (284-339)||(4052510-4052565)
chr8 (284-339)||(6386606-6386661)
chr8 (284-339)||(14005064-14005119)
chr8 (284-339)||(21272714-21272769)
chr8 (288-339)||(29672343-29672394)
chr8 (284-339)||(30543042-30543097)
chr8 (284-339)||(37664303-37664358)
chr8 (350-445)||(41709886-41709981)
chr8 (284-445)||(34101538-34101712)
chr8 (284-445)||(39642913-39643087)
chr8 (352-445)||(32019902-32019995)
chr8 (284-452)||(34063158-34063339)
chr8 (286-339)||(37618412-37618465)
chr8 (287-339)||(30501178-30501230)
chr8 (350-446)||(40389149-40389245)
chr8 (350-445)||(7591348-7591443)
chr8 (350-445)||(22999367-22999462)
chr8 (284-339)||(31732094-31732149)
chr8 (350-445)||(37474809-37474904)
chr8 (350-445)||(41548727-41548822)
chr8 (284-339)||(45446485-45446540)
chr8 (377-454)||(38047482-38047559)
chr8 (286-339)||(40389072-40389125)
chr8 (357-445)||(16485710-16485798)
chr8 (284-339)||(3251676-3251731)
chr8 (346-445)||(4052585-4052684)
chr8 (350-445)||(30542923-30543018)
chr8 (284-339)||(31513603-31513658)
chr8 (284-339)||(32020021-32020076)
chr8 (284-339)||(41548648-41548703)
chr8 (288-339)||(41709811-41709862)
chr8 (351-445)||(25478353-25478447)
chr8 (356-450)||(45114170-45114264)
chr8 (377-445)||(31732186-31732254)
chr8 (284-340)||(35225692-35225748)
chr8 (288-343)||(54204-54259)
chr8 (350-445)||(5968765-5968860)
chr8 (284-339)||(5968884-5968939)
chr8 (284-339)||(7591467-7591522)
chr8 (350-453)||(10656579-10656682)
chr8 (284-339)||(13406955-13407010)
chr8 (378-449)||(17520731-17520802)
chr8 (284-339)||(17805721-17805776)
chr8 (284-339)||(25478273-25478328)
chr8 (346-445)||(30501250-30501349)
chr8 (350-445)||(31513484-31513579)
chr8 (350-445)||(37618293-37618388)
chr8 (284-338)||(10656707-10656761)
chr8 (343-445)||(37861961-37862062)
chr8 (284-341)||(10320295-10320352)
chr8 (288-337)||(16595171-16595220)
chr8 (286-339)||(27109561-27109614)
chr8 (355-395)||(10320230-10320270)
chr8 (300-340)||(16485828-16485868)
chr8 (284-339)||(22999287-22999343)
chr8 (350-445)||(37664183-37664279)
[»] chr3 (71 HSPs)
chr3 (284-445)||(28675821-28675995)
chr3 (284-459)||(5442322-5442498)
chr3 (350-454)||(22484614-22484718)
chr3 (284-443)||(19906793-19906965)
chr3 (284-445)||(29584906-29585080)
chr3 (284-339)||(21373961-21374016)
chr3 (350-445)||(24721595-24721690)
chr3 (350-445)||(40094613-40094708)
chr3 (288-445)||(3867529-3867699)
chr3 (284-449)||(24571312-24571490)
chr3 (286-445)||(49748791-49748963)
chr3 (286-445)||(51925088-51925260)
chr3 (284-447)||(1344585-1344761)
chr3 (284-440)||(34026698-34026867)
chr3 (350-445)||(3695187-3695282)
chr3 (284-339)||(3864674-3864729)
chr3 (284-339)||(4851455-4851510)
chr3 (350-445)||(12349051-12349146)
chr3 (284-339)||(20609647-20609702)
chr3 (284-339)||(21221359-21221414)
chr3 (350-445)||(31882902-31882997)
chr3 (284-339)||(39052837-39052892)
chr3 (284-339)||(42636402-42636457)
chr3 (350-445)||(50386336-50386431)
chr3 (284-445)||(3964319-3964493)
chr3 (284-445)||(51259660-51259834)
chr3 (372-445)||(6179558-6179631)
chr3 (286-339)||(29646099-29646152)
chr3 (284-341)||(34351365-34351422)
chr3 (284-449)||(44267773-44267945)
chr3 (350-445)||(2135180-2135275)
chr3 (350-445)||(20255154-20255249)
chr3 (284-339)||(25860420-25860475)
chr3 (284-339)||(25927326-25927381)
chr3 (284-339)||(38213385-38213440)
chr3 (350-445)||(41682933-41683028)
chr3 (350-445)||(44117049-44117144)
chr3 (284-339)||(47958431-47958486)
chr3 (284-339)||(50678829-50678884)
chr3 (284-341)||(24721516-24721573)
chr3 (291-339)||(2135108-2135156)
chr3 (284-339)||(12349170-12349225)
chr3 (284-339)||(20255076-20255130)
chr3 (284-339)||(31883021-31883076)
chr3 (350-445)||(33364658-33364753)
chr3 (284-339)||(44116970-44117025)
chr3 (284-339)||(51296612-51296667)
chr3 (284-339)||(54622795-54622850)
chr3 (351-445)||(10747311-10747405)
chr3 (353-427)||(20609546-20609620)
chr3 (350-444)||(42636284-42636378)
chr3 (372-445)||(21221241-21221314)
chr3 (372-445)||(25927207-25927280)
chr3 (372-445)||(45690786-45690859)
chr3 (284-337)||(53557796-53557849)
chr3 (284-316)||(41694923-41694955)
chr3 (377-445)||(43175612-43175680)
chr3 (284-339)||(26282386-26282441)
chr3 (284-339)||(33364777-33364832)
chr3 (378-445)||(38213492-38213559)
chr3 (284-339)||(40094534-40094589)
chr3 (284-339)||(50386455-50386510)
chr3 (378-452)||(47958305-47958379)
chr3 (350-444)||(53557676-53557770)
chr3 (284-329)||(3695301-3695346)
chr3 (284-337)||(14155461-14155514)
chr3 (284-341)||(52300468-52300524)
chr3 (284-340)||(22484741-22484797)
chr3 (350-414)||(25860332-25860396)
chr3 (347-395)||(34351298-34351346)
chr3 (350-414)||(51296691-51296755)
[»] chr1 (72 HSPs)
chr1 (284-451)||(1601212-1601389)
chr1 (284-445)||(16451166-16451340)
chr1 (350-454)||(15539842-15539946)
chr1 (284-445)||(6029257-6029436)
chr1 (350-448)||(6143944-6144042)
chr1 (284-445)||(1351396-1351570)
chr1 (347-452)||(8839012-8839117)
chr1 (284-445)||(31004171-31004345)
chr1 (286-445)||(51264536-51264708)
chr1 (284-454)||(844676-844859)
chr1 (284-444)||(16437401-16437574)
chr1 (284-339)||(45490955-45491010)
chr1 (350-445)||(50304769-50304864)
chr1 (284-445)||(6711007-6711181)
chr1 (284-421)||(16704765-16704915)
chr1 (286-339)||(25539896-25539949)
chr1 (284-448)||(32270392-32270569)
chr1 (284-445)||(41972950-41973124)
chr1 (284-341)||(50382481-50382538)
chr1 (284-445)||(38663171-38663320)
chr1 (284-339)||(16386893-16386948)
chr1 (284-339)||(17887987-17888042)
chr1 (284-339)||(26764875-26764930)
chr1 (284-339)||(42705318-42705373)
chr1 (284-339)||(44738122-44738177)
chr1 (284-445)||(28340265-28340438)
chr1 (284-445)||(35387272-35387446)
chr1 (284-341)||(13994153-13994210)
chr1 (286-339)||(45658862-45658915)
chr1 (350-450)||(5109846-5109946)
chr1 (286-445)||(32289305-32289477)
chr1 (284-339)||(7183957-7184012)
chr1 (284-339)||(12890277-12890332)
chr1 (284-339)||(16476235-16476290)
chr1 (350-445)||(21071732-21071827)
chr1 (284-445)||(24339599-24339774)
chr1 (284-339)||(30105760-30105815)
chr1 (284-339)||(41967929-41967984)
chr1 (284-339)||(42510564-42510619)
chr1 (350-445)||(42512731-42512826)
chr1 (378-449)||(46155053-46155124)
chr1 (284-339)||(50540383-50540438)
chr1 (284-337)||(504473-504526)
chr1 (286-339)||(11772712-11772765)
chr1 (284-339)||(26118295-26118350)
chr1 (350-433)||(30105653-30105736)
chr1 (284-339)||(39281933-39281988)
chr1 (284-338)||(5109767-5109821)
chr1 (372-454)||(11772584-11772666)
chr1 (351-445)||(42510644-42510738)
chr1 (284-340)||(6144065-6144121)
chr1 (350-442)||(26118179-26118271)
chr1 (349-393)||(50382413-50382457)
chr1 (350-417)||(7837251-7837318)
chr1 (284-339)||(38087076-38087131)
chr1 (284-339)||(42512850-42512905)
chr1 (350-445)||(45490836-45490931)
chr1 (284-339)||(51703244-51703298)
chr1 (287-341)||(6771410-6771464)
chr1 (351-445)||(17327610-17327704)
chr1 (285-339)||(25343289-25343343)
chr1 (351-445)||(49303315-49303409)
chr1 (350-419)||(13994062-13994131)
chr1 (284-329)||(16643272-16643317)
chr1 (284-341)||(26733594-26733651)
chr1 (377-454)||(40610867-40610944)
chr1 (284-341)||(570425-570484)
chr1 (291-339)||(10384413-10384461)
chr1 (301-341)||(39717436-39717476)
chr1 (350-434)||(41967821-41967905)
chr1 (358-454)||(44737994-44738090)
chr1 (378-434)||(51703136-51703192)
[»] chr7 (68 HSPs)
chr7 (284-454)||(18386559-18386741)
chr7 (284-445)||(21784905-21785079)
chr7 (284-445)||(26994112-26994286)
chr7 (341-454)||(16963242-16963355)
chr7 (284-454)||(10932435-10932618)
chr7 (284-339)||(23349297-23349352)
chr7 (284-454)||(36769447-36769630)
chr7 (284-419)||(34295324-34295465)
chr7 (284-445)||(47953224-47953398)
chr7 (284-445)||(46633731-46633900)
chr7 (350-454)||(48445634-48445738)
chr7 (284-339)||(1870169-1870224)
chr7 (284-445)||(11321772-11321946)
chr7 (284-445)||(43158573-43158747)
chr7 (285-339)||(43213931-43213985)
chr7 (284-445)||(44748729-44748903)
chr7 (286-339)||(30849252-30849305)
chr7 (350-445)||(38301455-38301551)
chr7 (284-454)||(34519542-34519725)
chr7 (284-339)||(41211206-41211261)
chr7 (284-339)||(43189248-43189303)
chr7 (350-445)||(43368314-43368409)
chr7 (284-339)||(46408923-46408978)
chr7 (284-339)||(47316704-47316759)
chr7 (287-341)||(329507-329561)
chr7 (285-445)||(26910298-26910470)
chr7 (352-445)||(48894832-48894925)
chr7 (284-419)||(22724444-22724592)
chr7 (284-443)||(18470718-18470888)
chr7 (284-339)||(26371815-26371870)
chr7 (284-339)||(26652900-26652955)
chr7 (284-339)||(32873775-32873830)
chr7 (284-339)||(40753189-40753244)
chr7 (288-445)||(3922590-3922760)
chr7 (380-449)||(3891925-3891994)
chr7 (298-339)||(11250665-11250706)
chr7 (372-445)||(43213812-43213885)
chr7 (365-445)||(22723919-22723999)
chr7 (353-445)||(30849133-30849225)
chr7 (284-340)||(41665580-41665636)
chr7 (377-444)||(9913664-9913731)
chr7 (377-444)||(9927352-9927419)
chr7 (378-445)||(17237217-17237284)
chr7 (350-445)||(26700590-26700685)
chr7 (288-339)||(29661361-29661412)
chr7 (284-339)||(38301377-38301431)
chr7 (350-445)||(41211087-41211182)
chr7 (350-445)||(329583-329684)
chr7 (284-341)||(15035257-15035314)
chr7 (286-339)||(16963174-16963227)
chr7 (284-341)||(48699432-48699489)
chr7 (346-454)||(11250726-11250834)
chr7 (284-339)||(3892032-3892087)
chr7 (350-445)||(26371696-26371791)
chr7 (350-445)||(29661436-29661530)
chr7 (284-339)||(34117486-34117541)
chr7 (346-445)||(40753264-40753363)
chr7 (284-339)||(43368235-43368290)
chr7 (285-339)||(1363671-1363725)
chr7 (346-444)||(1870244-1870342)
chr7 (297-339)||(11822270-11822312)
chr7 (301-339)||(30599014-30599052)
chr7 (284-337)||(9913559-9913612)
chr7 (284-337)||(9927247-9927300)
chr7 (286-339)||(20127325-20127378)
chr7 (284-341)||(29372783-29372840)
chr7 (284-341)||(48445555-48445612)
chr7 (284-328)||(42332093-42332137)
[»] chr5 (54 HSPs)
chr5 (284-454)||(27838957-27839139)
chr5 (284-445)||(11963371-11963545)
chr5 (284-444)||(18470321-18470494)
chr5 (284-454)||(2351710-2351893)
chr5 (350-445)||(3735466-3735561)
chr5 (287-445)||(4689590-4689761)
chr5 (284-339)||(32528745-32528800)
chr5 (350-445)||(37148481-37148576)
chr5 (285-338)||(6284310-6284363)
chr5 (284-448)||(7523202-7523379)
chr5 (284-454)||(31644476-31644659)
chr5 (284-451)||(553427-553607)
chr5 (284-339)||(4818151-4818206)
chr5 (284-339)||(5571655-5571710)
chr5 (350-453)||(5598589-5598692)
chr5 (284-339)||(8136867-8136922)
chr5 (284-339)||(21739172-21739227)
chr5 (284-339)||(28090531-28090586)
chr5 (284-339)||(31770602-31770657)
chr5 (284-454)||(34794917-34795100)
chr5 (284-339)||(39788223-39788278)
chr5 (284-339)||(40489367-40489422)
chr5 (284-445)||(35701307-35701481)
chr5 (284-454)||(41459619-41459801)
chr5 (284-339)||(3735387-3735442)
chr5 (350-445)||(4664940-4665035)
chr5 (284-339)||(7208241-7208296)
chr5 (287-445)||(7770171-7770342)
chr5 (284-339)||(22493430-22493485)
chr5 (284-339)||(24036260-24036315)
chr5 (284-339)||(39918537-39918592)
chr5 (284-339)||(40182494-40182549)
chr5 (284-339)||(41790473-41790528)
chr5 (297-339)||(5673182-5673224)
chr5 (284-445)||(31879968-31880142)
chr5 (287-339)||(29241411-29241463)
chr5 (378-446)||(32092873-32092941)
chr5 (351-451)||(32528825-32528925)
chr5 (288-339)||(700612-700663)
chr5 (284-339)||(24181635-24181690)
chr5 (350-445)||(29241487-29241582)
chr5 (350-453)||(39788302-39788405)
chr5 (351-445)||(24181516-24181610)
chr5 (284-339)||(7725820-7725875)
chr5 (346-445)||(8136942-8137041)
chr5 (284-339)||(8560993-8561048)
chr5 (284-339)||(22432320-22432375)
chr5 (346-445)||(39918612-39918711)
chr5 (346-445)||(40489442-40489540)
chr5 (350-436)||(17031266-17031352)
chr5 (291-341)||(32092991-32093040)
chr5 (350-451)||(23091190-23091291)
chr5 (350-453)||(6284184-6284285)
chr5 (372-444)||(7208123-7208195)
[»] chr6 (58 HSPs)
chr6 (284-454)||(18597074-18597257)
chr6 (350-445)||(32860160-32860255)
chr6 (284-445)||(18057549-18057723)
chr6 (284-339)||(166967-167022)
chr6 (284-445)||(10960030-10960204)
chr6 (284-339)||(2614926-2614981)
chr6 (284-339)||(3259713-3259768)
chr6 (284-339)||(3379740-3379795)
chr6 (284-339)||(10324155-10324210)
chr6 (284-339)||(11279158-11279213)
chr6 (284-454)||(17867865-17868048)
chr6 (284-454)||(17877648-17877831)
chr6 (284-339)||(24203392-24203447)
chr6 (284-339)||(24242694-24242749)
chr6 (284-339)||(32132424-32132479)
chr6 (378-445)||(33041403-33041470)
chr6 (284-339)||(34684027-34684082)
chr6 (284-445)||(3932732-3932906)
chr6 (286-339)||(11613835-11613888)
chr6 (284-444)||(15276863-15277036)
chr6 (284-339)||(4494159-4494214)
chr6 (284-339)||(8177925-8177980)
chr6 (284-339)||(10485187-10485242)
chr6 (284-339)||(14808045-14808100)
chr6 (284-339)||(14925500-14925555)
chr6 (284-339)||(15277324-15277379)
chr6 (284-339)||(31870144-31870199)
chr6 (284-339)||(32409896-32409951)
chr6 (351-445)||(11212367-11212461)
chr6 (343-445)||(34176932-34177034)
chr6 (290-339)||(11675418-11675467)
chr6 (378-450)||(14807938-14808010)
chr6 (284-340)||(29054386-29054442)
chr6 (346-445)||(3259788-3259887)
chr6 (286-341)||(9200430-9200485)
chr6 (284-339)||(9902702-9902757)
chr6 (350-445)||(11279237-11279332)
chr6 (350-445)||(11382171-11382266)
chr6 (284-339)||(17443292-17443347)
chr6 (346-445)||(24203467-24203566)
chr6 (346-448)||(2615001-2615103)
chr6 (284-329)||(11382094-11382139)
chr6 (372-445)||(11613716-11613789)
chr6 (377-445)||(31870022-31870090)
chr6 (350-445)||(166848-166943)
chr6 (346-445)||(3379815-3379914)
chr6 (350-445)||(10324036-10324131)
chr6 (346-445)||(10485262-10485361)
chr6 (284-339)||(34176860-34176915)
chr6 (355-445)||(14925381-14925471)
chr6 (351-445)||(32409777-32409871)
chr6 (284-337)||(11212287-11212340)
chr6 (352-445)||(23636334-23636427)
chr6 (284-339)||(3290702-3290755)
chr6 (381-445)||(3290799-3290863)
chr6 (350-454)||(15277196-15277300)
chr6 (346-414)||(24242769-24242837)
chr6 (398-450)||(34402945-34402997)
[»] scaffold0050 (1 HSPs)
scaffold0050 (291-449)||(42839-43009)
[»] scaffold0004 (1 HSPs)
scaffold0004 (284-339)||(372975-373030)
[»] scaffold0650 (2 HSPs)
scaffold0650 (284-341)||(1652-1709)
scaffold0650 (350-445)||(1535-1630)
[»] scaffold0169 (2 HSPs)
scaffold0169 (284-339)||(12547-12602)
scaffold0169 (284-339)||(18065-18120)
[»] scaffold0027 (1 HSPs)
scaffold0027 (284-445)||(15202-15376)
[»] scaffold0025 (2 HSPs)
scaffold0025 (287-339)||(5451-5503)
scaffold0025 (350-444)||(5332-5426)
[»] scaffold0729 (2 HSPs)
scaffold0729 (284-339)||(4590-4645)
scaffold0729 (378-445)||(4471-4538)
[»] scaffold0360 (2 HSPs)
scaffold0360 (350-445)||(15265-15360)
scaffold0360 (284-339)||(15392-15447)
[»] scaffold0208 (2 HSPs)
scaffold0208 (284-339)||(2349-2404)
scaffold0208 (350-454)||(2222-2325)
[»] scaffold0014 (2 HSPs)
scaffold0014 (284-339)||(101979-102034)
scaffold0014 (372-445)||(102080-102153)
[»] scaffold0054 (1 HSPs)
scaffold0054 (284-445)||(23605-23779)
[»] scaffold0181 (1 HSPs)
scaffold0181 (284-339)||(19101-19156)
[»] scaffold0957 (1 HSPs)
scaffold0957 (346-445)||(2388-2487)
[»] scaffold0155 (1 HSPs)
scaffold0155 (286-341)||(33553-33608)
[»] scaffold0098 (2 HSPs)
scaffold0098 (284-339)||(51469-51523)
scaffold0098 (352-445)||(51549-51642)
[»] scaffold0047 (1 HSPs)
scaffold0047 (350-445)||(19047-19143)


Alignment Details
Target: chr2 (Bit Score: 125; Significance: 4e-64; HSPs: 70)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 284 - 520
Target Start/End: Complemental strand, 41366170 - 41365923
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattt-------------atcactttcctccagtttgttatgtccct 370  Q
    |||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||             ||| ||| |||||||||||| ||||||||    
T  41366170 agacaacttgtatgtgagacaaaaaattgtgttgtggtttggtgagggacaaaaatttcagtttttgtcctatctcttgcctccagtttgtcatgtccct 41366071  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacactctaacttatannnnnnnngg 470  Q
     ||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||| ||||||||||||||        ||    
T  41366070 gaaactgtttcacaaatcaaacattgcacaattggagttgttctatcttgtttttcagtttttagcaaatcaaacgcactctaacttata--ttttttgg 41365973  T
Q  471 gtctctgccccttgtttagtttgattggtttttctatcttggtctttagc 520  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||    
T  41365972 gtatctgccccttgtttagtttgattggtttttctatcttggtctttagc 41365923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 7 - 196
Target Start/End: Complemental strand, 41366455 - 41366263
Alignment:
Q  7 aaacttatgagctaatgagttggtcggcaagcctgcccc---annnnnnnnnaacagctatagcttgagcagtttagctcttatgggatgtgattagagt 103  Q
    ||||||||||||||||||||||| |||||||||||||||              ||| |||||||||||||||||||||||||||||||| ||||||||||    
T  41366455 aaacttatgagctaatgagttggccggcaagcctgccccctttttttttttttacaactatagcttgagcagtttagctcttatgggatatgattagagt 41366356  T
Q  104 tccctattaattttttgagtcgtgtccaacttcaattagtcatttgttaccggtattggatagaacaaaacaaaatataataacacaacataa 196  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||  |||||||| ||||||| ||||||||||||||||||||||||    
T  41366355 tccctattaattttttgagtcatgtccaacttccattagtcatttgttactagtattggacagaacaatacaaaatataataacacaacataa 41366263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 284 - 445
Target Start/End: Complemental strand, 9732990 - 9732816
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||             || || ||| ||||||||||||  ||| |||    
T  9732990 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcctgtacct 9732891  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| | |||||||||| |||||| ||||| |||||||||||||||||    
T  9732890 gaaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttaacaaatcaaac 9732816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 284 - 445
Target Start/End: Complemental strand, 2645146 - 2644973
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat--------ttatca----ctttcctccagtttgttatgtccctc 371  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||        || ||     ||| ||||||||||||  ||| |||     
T  2645146 agacaacttgtatgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctctccttgcctccagtttgtcctgtacctg 2645047  T
Q  372 aaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||| ||||||||||||||||| || |||| | ||||||||||||||||| ||||| |||||| ||||||||||    
T  2645046 aaacagttttacaaatcaaacactggacaactagagttgttctatcctgtccttcattttttagcaaatcaaac 2644973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 284 - 445
Target Start/End: Original strand, 6896198 - 6896372
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattta-------------tcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||| | | ||||||||||||||||||||||              || ||| ||||||||||||| |||||||    
T  6896198 agacaacttgtacgtgggacaaaaagttgtgctgttgtttggtgagggacaaaaatttcagtttttatcctgtcccttgcctccagtttgttttgtccct 6896297  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| || ||||||||| ||||||  |||| |||||||||||||||||    
T  6896298 gaaacagttttacaaatcaaacactggacaactgaagttgttctgtcctgtctttcattttttaacaaatcaaac 6896372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 284 - 449
Target Start/End: Complemental strand, 38623364 - 38623186
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||             || ||  || |||| |||||||  |||||||    
T  38623364 agacaacttgtatgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttgtcttttccattgcctcaagtttgtcctgtccct 38623265  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacac 449  Q
     |||| |||||||||||||||||||| | || || ||||||| | || ||| ||||| |||||||||||||||||||||    
T  38623264 gaaacagttttacaaatcaaacattggataactgaagttgttatgtcatgtccttcaatttttaacaaatcaaacacac 38623186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 42706389 - 42706444
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  42706389 agacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 42706444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 284 - 445
Target Start/End: Complemental strand, 37003928 - 37003777
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaatttatcactttcctccagtttgttatgtccctcaaactgttttac 383  Q
    |||||| ||||| |||||||||||||||||||| |||||||||||||||||||||  ||| | ||        |||||||||| ||| |||| | |||||    
T  37003928 agacaatttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaa--tatgagtt--------tttgttatgtacctgaaacagatttac 37003839  T
Q  384 aaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||| || |||| | |||||||| | |||||| ||||| |||||| ||||||||||    
T  37003838 aaatcaaacactggacaacttgagttgttatgtcctgtccttcattttttagcaaatcaaac 37003777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 284 - 445
Target Start/End: Complemental strand, 7761633 - 7761459
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattta-------------tcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| ||| |||||||||||||| | |||||||||||||||||||||| |              || ||| |||| ||||||| |||| |||    
T  7761633 agacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcatgtacct 7761534  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| | |||||||||| |||||| ||||| |||||| ||||||||||    
T  7761533 gaaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaac 7761459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 379 - 449
Target Start/End: Original strand, 11115008 - 11115078
Alignment:
Q  379 tttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacac 449  Q
    |||||||||||||||||| ||||||||||||||| | |||||| ||||| |||||| ||||||||||||||    
T  11115008 tttacaaatcaaacattggacaattggagttgttttgtcctgtccttcattttttagcaaatcaaacacac 11115078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 284 - 449
Target Start/End: Original strand, 33366640 - 33366818
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||              | || ||| ||||||||||||  ||| |||    
T  33366640 agacaacttgtatgtgggagaaaaagttgtgttgtggtttggtgaggaacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacct 33366739  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacac 449  Q
     |||| ||||||||||||||||| || |||||| || ||||||| || | | ||||| |||||| ||||||||||||||    
T  33366740 gaaacagttttacaaatcaaacactggacaattagaattgttctgtcatatccttcattttttagcaaatcaaacacac 33366818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 343 - 449
Target Start/End: Original strand, 39461416 - 39461522
Alignment:
Q  343 tcactttcctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatca 442  Q
    |||||| ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| |  | |||||||||||||| ||||| |||||| |||||||    
T  39461416 tcacttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactaaaattgttctatcctgtccttcattttttagcaaatca 39461515  T
Q  443 aacacac 449  Q
    |||||||    
T  39461516 aacacac 39461522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 284 - 445
Target Start/End: Original strand, 9717254 - 9717405
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaatttatcactttcctccagtttgttatgtccctcaaactgttttac 383  Q
    |||||||||||| |||||||||||||||||| | |||||||||||||||||||||   || | ||        |||||  ||| ||| |||| |||||||    
T  9717254 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaa--catgagtt--------tttgtcctgtacctgaaacagttttac 9717343  T
Q  384 aaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||| || |||| | |||||||||| |||||| ||||| |||||| ||||||||||    
T  9717344 aaatcaaacactgaacaactagagttgttctgtcctgtccttcattttttagcaaatcaaac 9717405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 450
Target Start/End: Original strand, 37308685 - 37308865
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    |||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||              | || ||| ||||||||||||  ||| |||    
T  37308685 agacaatttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacct 37308784  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttca-gtttttaacaaatcaaacacact 450  Q
     |||| ||||||||||||||||| || |||| | |||||||||| |||||| |||||  |||||| |||||||||| ||||    
T  37308785 gaaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcatttttttagcaaatcaaacgcact 37308865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 17540745 - 17540800
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  17540745 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 17540800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 19513749 - 19513694
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  19513749 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 19513694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 34338919 - 34339014
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| | |||||||||| |||||| ||||| |||||| ||||||||||    
T  34338919 cctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaac 34339014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 35114815 - 35114870
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||    
T  35114815 agacaacttgtacgtgggacaaaaaattgtgttgtggtttggtgagggacaaaaat 35114870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 450
Target Start/End: Complemental strand, 38993131 - 38992952
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaatt-------------tatcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||||| |||||||  |||| |||||||||             | || ||| ||||||||||||  | | |||    
T  38993131 agacaacttgtacgtgggacaaaaagttgtgttgtggtttgacgaggaacaaaaattgtagtttttgtcctgtcccttgcctccagtttgtcctcttcct 38993032  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacact 450  Q
     |||||||||||||||||||||| || |||| ||||||| |||| || ||| ||||| |||||| |||||||||| ||||    
T  38993031 gaaactgttttacaaatcaaacactggacaactggagttattctgtcatgtccttcattttttatcaaatcaaacgcact 38992952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 3913520 - 3913468
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaa 336  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||||||||||    
T  3913520 agacaacttgtacgtggaacaaaaagttgtgttgtggtttggtgagggacaaa 3913468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 377 - 449
Target Start/End: Complemental strand, 10399824 - 10399752
Alignment:
Q  377 gttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacac 449  Q
    ||||||||||||||||| || |||| || |||||||||||| ||| ||||| |||||| ||||||||||||||    
T  10399824 gttttacaaatcaaacactgaacaactgaagttgttctatcatgtccttcattttttagcaaatcaaacacac 10399752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 454
Target Start/End: Original strand, 42365686 - 42365790
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacac 449  Q
    |||||||||||| |||| ||| |||| ||||||||||||||||| |  |||| | |||||||| | || ||| ||||| |||||| ||||||||||||||    
T  42365686 cctccagtttgtcatgtacctgaaacggttttacaaatcaaacactagacaactagagttgttatgtcatgtccttcattttttagcaaatcaaacacac 42365785  T
Q  450 tctaa 454  Q
     ||||    
T  42365786 cctaa 42365790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 1247177 - 1247232
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||||||||||||||||||   ||||||||||||||||||||||    
T  1247177 agacaacttgtacgtgggacaaaaagttgtgcagtggtttggtgagggacaaaaat 1247232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 5278894 - 5278839
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||| ||||| | ||||||||||||||||||||||    
T  5278894 agacaacttgtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaat 5278839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 7258927 - 7258982
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||| |||||||||||||| | ||||||||||||||||||||||    
T  7258927 agacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaat 7258982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 18685866 - 18685921
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | |||||||||||| |||||||||    
T  18685866 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagagacaaaaat 18685921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 26418953 - 26419008
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||| ||||||||    
T  26418953 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgaggaacaaaaat 26419008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 30326313 - 30326218
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| | |||||| ||| |||||| ||||| |||||| ||||||||||    
T  30326313 cctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgctctgtcctgtccttcattttttagcaaatcaaac 30326218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 32497945 - 32498000
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||| ||||||||    
T  32497945 agacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgaggtacaaaaat 32498000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 32766485 - 32766390
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||| |||| ||| |||| ||||||||||||||||| || ||||||  ||||||||| | |||| ||||  |||||| ||||||||||    
T  32766485 cctccagtttgtcatgtacctgaaacagttttacaaatcaaacactggacaattatagttgttctgttctgtccttcgttttttagcaaatcaaac 32766390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 33889273 - 33889328
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||| ||||||    
T  33889273 agacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggaaaaaaat 33889328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 40692327 - 40692382
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||  | ||||||||||||||||||||||    
T  40692327 agacaacttgtacgtgggacaaaaagttgttctgtggtttggtgagggacaaaaat 40692382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 40832529 - 40832474
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||| ||||||| ||| |||||||||||||||| ||||||||||||||||||||||    
T  40832529 agactacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaat 40832474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 412
Target Start/End: Complemental strand, 45463153 - 45463042
Alignment:
Q  301 gacaaaaagttgtgttatggtttggtgagggacaaaaatttatcactttcctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcaca 400  Q
    |||||||||||||||| |||||||||||| ||||||||| | ||  || ||||| ||||||  ||| ||| || | |||||||||||||||  ||| |||    
T  45463153 gacaaaaagttgtgttgtggtttggtgagtgacaaaaatatgtctattgcctcctgtttgtcttgtacctgaagcagttttacaaatcaaatgttgaaca 45463054  T
Q  401 attggagttgtt 412  Q
    | ||||||||||    
T  45463053 actggagttgtt 45463042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 375 - 445
Target Start/End: Original strand, 13829560 - 13829630
Alignment:
Q  375 ctgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||| |||||||||||| || |||| | |||||||||| |||||| ||||| |||||||||||||||||    
T  13829560 ctgtttcacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttaacaaatcaaac 13829630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 284 - 445
Target Start/End: Original strand, 44284659 - 44284833
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| ||| |||||||||||||| | |||||| |||||||||||||||             || || ||| ||||||||||||  ||| |||    
T  44284659 agacaacttgtacgtgagacaaaaagttgtgctgtggtttagtgagggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcttgtacct 44284758  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| |  ||||||||| || ||| ||||| |||||| ||||||||||    
T  44284759 gaaacagttttacaaatcaaacactgaacaactctagttgttctgtcatgtccttcattttttagcaaatcaaac 44284833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 286 - 339
Target Start/End: Original strand, 4641548 - 4641601
Alignment:
Q  286 acaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||||| |||||||||||||| | |||||||||||| |||||||||    
T  4641548 acaacttgtatgtgagacaaaaagttgtgctgtggtttggtgagagacaaaaat 4641601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 449
Target Start/End: Complemental strand, 16177842 - 16177765
Alignment:
Q  372 aaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacac 449  Q
    |||| ||||||||||||||||| || ||||||||||||||| | || | | ||||| |||||| ||||||||||||||    
T  16177842 aaacagttttacaaatcaaacactggacaattggagttgttatgtcatatccttcattttttagcaaatcaaacacac 16177765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 443
Target Start/End: Complemental strand, 37863347 - 37863254
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaa 443  Q
    ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| | |||||||||| || ||| ||||| |||||| ||||||||    
T  37863347 cctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgttctgtcatgtccttcattttttagcaaatcaa 37863254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 346 - 445
Target Start/End: Original strand, 7259002 - 7259101
Alignment:
Q  346 ctttcctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||| ||||||||||||  ||| ||| |||| ||||||||||||||||| |  |||  | |||||||||| || ||| ||||| |||||||||||||||||    
T  7259002 cttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactagacagctagagttgttctgtcatgtccttcattttttaacaaatcaaac 7259101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 11114902 - 11114957
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||  |||||||||||||||||| | ||||||||||||| ||||||||    
T  11114902 agacaacttgtgcgtgggacaaaaagttgtgatgtggtttggtgaggaacaaaaat 11114957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 12672534 - 12672479
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||||||  ||||| ||||| ||||||| ||||||||||||||||||||||    
T  12672534 agacaacttgtacttgggataaaaacttgtgttgtggtttggtgagggacaaaaat 12672479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 16104304 - 16104359
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||| ||||| ||| |||||||||||||| | ||||||||||||||||||||||    
T  16104304 agacaatttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaat 16104359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 16177943 - 16177888
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||| |||||||||||||||| ||||||||| || |||||||||    
T  16177943 agacaacttgtacgtgagacaaaaagttgtgttgtggtttggtaagcgacaaaaat 16177888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 18685945 - 18686040
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| | ||||| |||| || ||| ||||| |||||| ||||||||||    
T  18685945 cctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttattctgtcatgtccttcattttttagcaaatcaaac 18686040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 26981769 - 26981714
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| || | |||||||||| |||| ||||||||||||||||||||||    
T  26981769 agacaacttgtacgtagaacaaaaagttttgttgtggtttggtgagggacaaaaat 26981714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 30712969 - 30713064
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||| ||||| ||||||| |||| || |||||||||||||| || | || |||||||||| | || |||  |||| |||||||||||||||||    
T  30712969 cctccaggttgttctgtccctgaaacagtattacaaatcaaacactggataactggagttgttttgtcatgtctttcattttttaacaaatcaaac 30713064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 30798469 - 30798375
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||| |||| ||| |||| ||||||||||||||||| || |||| | |||||||||| | |||  ||||| |||||| ||||||||||    
T  30798469 cctccagtttgtcatgtacctgaaacagttttacaaatcaaacactggacaactagagttgttctgt-ctgcccttcattttttagcaaatcaaac 30798375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 288 - 339
Target Start/End: Complemental strand, 30798545 - 30798494
Alignment:
Q  288 aacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||| |||||| ||||||||||| | ||||||||||||||||||||||    
T  30798545 aacttgtacgtgggataaaaagttgtgatgtggtttggtgagggacaaaaat 30798494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 34338840 - 34338895
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||  |||||||||||||||||| | |||||||||||||| |||||||    
T  34338840 agacaacttgtgcgtgggacaaaaagttgtgctgtggtttggtgagggtcaaaaat 34338895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 445
Target Start/End: Complemental strand, 28824537 - 28824443
Alignment:
Q  351 ctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||| |||  ||| ||| |||| ||||||||||||||||| || |||| || ||||||||| || ||| ||||| |||||| ||||||||||    
T  28824537 ctccagtatgtgctgtacctgaaacagttttacaaatcaaacactggacaactgaagttgttctgtcatgtccttcattttttagcaaatcaaac 28824443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 339
Target Start/End: Original strand, 8112337 - 8112385
Alignment:
Q  291 ttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||| ||| ||||||||||||||| |||||||||||| |||||||||    
T  8112337 ttgtatctggaacaaaaagttgtgttgtggtttggtgagagacaaaaat 8112385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 32766565 - 32766509
Alignment:
Q  284 agacaacttgtatgtgggacaaaaa-gttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||| |||| || ||||||||| |||||||| ||||||||||||||||||||||    
T  32766565 agacaacctgtacgtaggacaaaaaagttgtgttgtggtttggtgagggacaaaaat 32766509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 2086172 - 2086266
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| | |||||| ||| || ||| ||||| |||||| ||||||||||    
T  2086172 cctccagtttgtcttgtacctgaaacagttttacaaatcaaacactggacaactagagttg-tctgtcttgtccttcattttttagcaaatcaaac 2086266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 12939360 - 12939305
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||| || ||||||||||| | ||||||||||| ||||||||||    
T  12939360 agacaacttgtacgtgagataaaaagttgtgctgtggtttggtgaaggacaaaaat 12939305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 433
Target Start/End: Complemental strand, 19513670 - 19513587
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagttttt 433  Q
    ||||| ||||||  ||| ||| |||| |||||||||||||||||||| | || | |||||||||| |||||| ||||| |||||    
T  19513670 cctcccgtttgtcctgtacctgaaacagttttacaaatcaaacattggaaaactagagttgttctgtcctgtccttcatttttt 19513587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 436
Target Start/End: Complemental strand, 26981663 - 26981604
Alignment:
Q  377 gttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaac 436  Q
    ||||||||||||||||| || |||| |||||||||||| | |||| ||||| ||||||||    
T  26981663 gttttacaaatcaaacactggacaactggagttgttctgttctgtccttcattttttaac 26981604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 445
Target Start/End: Complemental strand, 27462779 - 27462688
Alignment:
Q  354 cagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||| |||| ||| |||| ||||||||||||||||| || |||| || | ||||| ||||||||  ||||  |||||| |||||||||    
T  27462779 cagtttgtcatgtacctaaaacagttttacaaatcaaacactggacaactgaaattgttatatcctgtctttcatcttttaaaaaatcaaac 27462688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 339
Target Start/End: Complemental strand, 27462842 - 27462807
Alignment:
Q  304 aaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||||||| ||||||||||||||||||||||    
T  27462842 aaaaagttgtgttgtggtttggtgagggacaaaaat 27462807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 28824617 - 28824562
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||| | ||| || ||||||||||| | ||||||||||||||||||||||    
T  28824617 agacaacttgcacgtgagataaaaagttgtgatgtggtttggtgagggacaaaaat 28824562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 445
Target Start/End: Original strand, 32498020 - 32498119
Alignment:
Q  346 ctttcctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||| ||| |||||||| |||| ||| |||| ||||||||||||||||| || |||| | ||||||||||  | ||  ||||| |||||| ||||||||||    
T  32498020 cttgccttcagtttgtcatgtacctgaaacagttttacaaatcaaacactggacaactagagttgttctgccatgcccttcattttttagcaaatcaaac 32498119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 351 - 445
Target Start/End: Original strand, 40692407 - 40692501
Alignment:
Q  351 ctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||  ||| ||| |||| |||| |||||| ||||| || |||| | |||||||||| || ||| ||||| |||||| ||||||||||    
T  40692407 ctccagtttgtcttgtacctaaaacagtttcacaaattaaacactggacaactagagttgttctgtcttgtccttcattttttagcaaatcaaac 40692501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 83379 - 83476
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacac 447  Q
    |||| ||||||| ||||||| ||||| ||||||||||||||||| ||  ||| || ||||||  | || ||| ||||  ||||||||| |||||||||    
T  83379 cctctagtttgtcatgtcccacaaacagttttacaaatcaaacactgtgcaactgaagttgtcttgtcatgtccttcgttttttaacagatcaaacac 83476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 26796258 - 26796315
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattt 341  Q
    |||||||||||| ||| |||||||||||| ||| || ||| |||||||||| ||||||    
T  26796258 agacaacttgtacgtgtgacaaaaagttgcgttgtgctttagtgagggacacaaattt 26796315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 337
Target Start/End: Complemental strand, 30326391 - 30326338
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaa 337  Q
    |||||||||||| ||| |||||||||||||| | |||||||| ||| |||||||    
T  30326391 agacaacttgtacgtgagacaaaaagttgtgctgtggtttggcgagagacaaaa 30326338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 421
Target Start/End: Original strand, 42706458 - 42706539
Alignment:
Q  340 ttatcactttcctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgt 421  Q
    ||||| ||| ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| | || ||||||| ||||||    
T  42706458 ttatcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagaattgttctgtcctgt 42706539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 338
Target Start/End: Original strand, 83315 - 83351
Alignment:
Q  302 acaaaaagttgtgttatggtttggtgagggacaaaaa 338  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  83315 acaaaaagttgtgttatggtttagtgagagacaaaaa 83351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 310 - 342
Target Start/End: Original strand, 130355 - 130387
Alignment:
Q  310 ttgtgttatggtttggtgagggacaaaaattta 342  Q
    ||||||| |||||||||||||||||||||||||    
T  130355 ttgtgttgtggtttggtgagggacaaaaattta 130387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 414
Target Start/End: Complemental strand, 5278815 - 5278751
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttct 414  Q
    |||||||||||| |||| ||| |||| |||||||||||||||||    |||||| ||||||||||    
T  5278815 cctccagtttgtcatgtacctgaaacagttttacaaatcaaacacctaacaattagagttgttct 5278751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 372 - 444
Target Start/End: Complemental strand, 18793252 - 18793180
Alignment:
Q  372 aaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaa 444  Q
    |||| ||||||||||||||||| ||  ||| | |||||||||| || ||| ||||| |||||| |||||||||    
T  18793252 aaacagttttacaaatcaaacactgagcaactagagttgttctgtcatgtccttcattttttagcaaatcaaa 18793180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 284 - 445
Target Start/End: Complemental strand, 13753 - 13579
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattt-------------atcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||  | ||||||||||||||||||||||||             ||| ||| ||||||||||||| |||||||    
T  13753 agacaacttgtaagtgggacaaaaagttgtactgtggtttggtgagggacaaaaatttcagtttttgtcctatcccttgcctccagtttgttctgtccct 13654  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     ||||  |||||||||||||||| || |||| |||||||||||| |||||| ||||| |||||||||||||||||    
T  13653 gaaacaattttacaaatcaaacactggacaactggagttgttctgtcctgtccttcattttttaacaaatcaaac 13579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 6e-29; HSPs: 101)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 284 - 448
Target Start/End: Original strand, 39078694 - 39078871
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattt-------------atcactttcctccagtttgttatgtccct 370  Q
    |||||||| ||| || ||||||||| ||||||| ||||||||||||||||||||||||             ||| ||| ||||||||||||| |||||||    
T  39078694 agacaactcgtacgtaggacaaaaatttgtgttgtggtttggtgagggacaaaaatttcaggttttgtcctatctcttgcctccagtttgttctgtccct 39078793  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacaca 448  Q
     |||| ||||||||||||||||| || |||| |||||||||||| || ||| ||||| ||||||||||||||||||||    
T  39078794 gaaacagttttacaaatcaaacactggacaactggagttgttctgtcatgtccttcattttttaacaaatcaaacaca 39078871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 284 - 445
Target Start/End: Original strand, 3649669 - 3649843
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattta-------------tcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||              || ||| ||| ||||||||| |||||||    
T  3649669 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaattttagtttttgtcctgtcccttgccttcagtttgttctgtccct 3649768  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| |  |||| |||||||||||| || ||| ||||| |||||||||||||||||    
T  3649769 gaaacagttttacaaatcaaacactagacaactggagttgttctgtcttgtccttcattttttaacaaatcaaac 3649843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 284 - 444
Target Start/End: Original strand, 43739494 - 43739644
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaatttatcactttcctccagtttgttatgtccctcaaactgttttac 383  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||  ||| ||        ||||| ||||||||||||| |||||||    
T  43739494 agacaacttgtatgtgggacaaaatgttgtgttgtggtttggtgagggacaataatt--tcagtt--------tttgtcatgtccctcaaacagttttac 43739583  T
Q  384 aaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaa 444  Q
    ||||||||||||  |||| || ||||||  ||||  || ||||| |||||| |||||||||    
T  43739584 aaatcaaacattttacaactgaagttgtcttatcacgtccttcattttttagcaaatcaaa 43739644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 284 - 454
Target Start/End: Original strand, 24002372 - 24002555
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattta-------------tcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||| | |||||||||||||||||||||| |              || ||| ||||||||||||  ||| |||    
T  24002372 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacct 24002471  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacactctaa 454  Q
     |||||||||||||||||||||| || |||| | |||||||||| | |||| ||||| |||||| |||||||||| ||| ||||    
T  24002472 gaaactgttttacaaatcaaacactggacaactagagttgttctgtactgtccttcattttttagcaaatcaaacgcaccctaa 24002555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 28115285 - 28115340
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28115285 agacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 28115340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 50729516 - 50729421
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||| ||||||| |||| ||||||||||||||||| || |||| || ||||||||| || ||| ||||| |||||||||||||||||    
T  50729516 cctccagtttgttctgtccctgaaacagttttacaaatcaaacactggacaactgaagttgttctgtcttgtccttcattttttaacaaatcaaac 50729421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 284 - 445
Target Start/End: Original strand, 23521913 - 23522087
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||              |||| ||| | ||||||||||  ||| |||    
T  23521913 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctatcccttgcttccagtttgtcctgtacct 23522012  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| | |||||||| | |||||| ||||| |||||| ||||||||||    
T  23522013 gaaacagttttacaaatcaaacactggacaactagagttgttttgtcctgtccttcattttttagcaaatcaaac 23522087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 284 - 427
Target Start/End: Complemental strand, 47642544 - 47642388
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||             || || ||| ||||||||||||  ||| |||    
T  47642544 agacaacttgtacgtgggacaaaaagttgtgttgtggtttgctgagggacaaaaatatcagtttttatcttgtctcttacctccagtttgtcctgtgcct 47642445  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttca 427  Q
     |||| ||||||||||||||||| || |||| |||||||||||| |||||| |||||    
T  47642444 gaaacagttttacaaatcaaacactgaacaactggagttgttctgtcctgtccttca 47642388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 38812553 - 38812608
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  38812553 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 38812608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 50186561 - 50186616
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  50186561 agacaacttgtatgtgggataaaaagttgtgttgtggtttggtgagggacaaaaat 50186616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 55065386 - 55065331
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  55065386 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 55065331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 284 - 445
Target Start/End: Original strand, 12600919 - 12601093
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| ||| |||||||||||||||| ||||||| ||||||||||||||             || || |||  |||||||||||  ||| |||    
T  12600919 agacaacttgtacgtgagacaaaaagttgtgttgtggtttgatgagggacaaaaatatgagtttttgtcttgtcccttatctccagtttgtcctgtacct 12601018  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||||||||||||||||||||| || |||| | |||||||||| || ||| ||||| |||||| ||||||||||    
T  12601019 gaaactgttttacaaatcaaacactggacaactagagttgttctgtcatgtccttcattttttagcaaatcaaac 12601093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 284 - 337
Target Start/End: Original strand, 21202772 - 21202825
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaa 337  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  21202772 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaa 21202825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 25978664 - 25978607
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattt 341  Q
    |||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||    
T  25978664 agacaacttgtaagtgagacaaaaagttgtgatatggtttggtgagggacaaaaattt 25978607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 286 - 339
Target Start/End: Original strand, 37931955 - 37932008
Alignment:
Q  286 acaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  37931955 acaacttgtatgtaggacaaaaagttgtgttgtggtttggtgagggacaaaaat 37932008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 6776611 - 6776666
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||| || |||||||||||||||||||| ||||||||||||||||||||||    
T  6776611 agacaacttttacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 6776666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 20802584 - 20802529
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  20802584 agacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 20802529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 454
Target Start/End: Complemental strand, 22318437 - 22318254
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattta-------------tcactttcctccagtttgttatgtccct 370  Q
    ||||||||| || ||  |||||||||||||||| ||||||||||||||||||||||||              || ||| ||| ||||||||| |||||||    
T  22318437 agacaacttctacgtaagacaaaaagttgtgttgtggtttggtgagggacaaaaatttcaaattttgtcctgtctcttgccttcagtttgttctgtccct 22318338  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacactctaa 454  Q
     |||| ||||||||||||||||| |  |||  ||| |||||||| || ||| ||||| ||||||||||||||||| ||| ||||    
T  22318337 aaaacagttttacaaatcaaacactagacagctggggttgttctgtcatgtccttcattttttaacaaatcaaacgcaccctaa 22318254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 29785590 - 29785535
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||    
T  29785590 agacaacttgtacgtgggacaaaaagctgtgttgtggtttggtgagggacaaaaat 29785535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 33177085 - 33177030
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||  |||||||||||||||||||| ||||||||||||||||||||||    
T  33177085 agacaacttgtgcgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 33177030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 33552895 - 33552840
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  33552895 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 33552840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 36497250 - 36497305
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||    
T  36497250 agacaacttgtatgttggacaaaaagttgtgatgtggtttggtgagggacaaaaat 36497305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 43641132 - 43641187
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  43641132 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 43641187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 49152153 - 49152098
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||    
T  49152153 agacaacttgtacgtgggataaaaagttgtgttgtggtttggtgagggacaaaaat 49152098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 50178466 - 50178371
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| || ||||||||| |||||| ||||| |||||| ||||||||||    
T  50178466 cctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactgaagttgttctgtcctgtccttcattttttagcaaatcaaac 50178371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 50727966 - 50727911
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  50727966 agacaacttgtacgtgggacaaaaagttgtgttgtggtttgatgagggacaaaaat 50727911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 50735980 - 50735925
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  50735980 agacaacttgtacgtgggacaaaaagttgtgttgtggtttgatgagggacaaaaat 50735925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 445
Target Start/End: Original strand, 52319356 - 52319535
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattta-------------tcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||| | |||||||||||||||||||||| |              || ||| ||||||||||||  ||| |||    
T  52319356 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttcgtcctgtcccttgcctccagtttgtcctgtacct 52319455  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagt-----tgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| |||||||||||||||||||| |||| | ||||     |||||| |||||| ||||| |||||||||||||||||    
T  52319456 gaaacagttttacaaatcaaacattggacaactagagttgttctgttctgtcctgtccttcattttttaacaaatcaaac 52319535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 52949753 - 52949808
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  52949753 agacaacttgtacgtgggacaaaaagttgtgttgtggtttgctgagggacaaaaat 52949808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 56154654 - 56154709
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  56154654 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 56154709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 284 - 445
Target Start/End: Complemental strand, 44649217 - 44649043
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattta-------------tcactttcctccagtttgttatgtccct 370  Q
    ||||||||||||  ||||||||||||||||||| ||||||| |||||||||||||| |              || ||| ||||||||||||  ||| |||    
T  44649217 agacaacttgtacatgggacaaaaagttgtgttgtggtttgctgagggacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacct 44649118  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||| | || | || |||||||||||| |||||| ||||| |||||| ||||||||||    
T  44649117 gaaacagttttacaaatcaaaaactggataactggagttgttctgtcctgtccttcattttttagcaaatcaaac 44649043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 445
Target Start/End: Complemental strand, 9512393 - 9512219
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaa--------tttatc-----actttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||| | ||||||||||| |||||||||        ||| ||     |||| |||||||||| |  ||| |||    
T  9512393 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgaaggacaaaaatatgagtttttgtcctgttacttgcctccagtttatcttgtacct 9512294  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| | ||||||||||||| ||| ||||  |||||| ||||||||||    
T  9512293 gaaacagttttacaaatcaaacactgaacaactagagttgttctatcatgtccttcgttttttagcaaatcaaac 9512219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 26083372 - 26083429
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattt 341  Q
    |||||||||||| ||||||||||||||| || | ||||||||||||||||||||||||    
T  26083372 agacaacttgtaagtgggacaaaaagttatgctgtggtttggtgagggacaaaaattt 26083429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 339
Target Start/End: Complemental strand, 44324393 - 44324340
Alignment:
Q  286 acaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  44324393 acaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 44324340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 454
Target Start/End: Original strand, 11056154 - 11056258
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacac 449  Q
    ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| || ||||||| |||||||  ||||| |||||| |||||||||| |||    
T  11056154 cctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactgaagttgttttatcctgaccttcattttttagcaaatcaaacgcac 11056253  T
Q  450 tctaa 454  Q
     ||||    
T  11056254 cctaa 11056258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 16320555 - 16320607
Alignment:
Q  287 caacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||| |||| |||||||||||||||||||| ||||||||||||||||||||||    
T  16320555 caacctgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 16320607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 1231344 - 1231399
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | |||||| |||||||||||||||    
T  1231344 agacaacttgtacgtgggacaaaaagttgtgctgtggttttgtgagggacaaaaat 1231399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 2725107 - 2725012
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||  ||| ||| |||  ||||||||||||||||| || |||| | |||||||||| |||||| ||||| |||||| ||||||||||    
T  2725107 cctccagtttgtcctgtacctaaaagagttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaac 2725012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 7555010 - 7554955
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||| ||||||||||||||||||||||| |||| ||||||||||    
T  7555010 agacaacttgtacgtgagacaaaaagttgtgttatggtttagtgaaggacaaaaat 7554955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 20694404 - 20694459
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| || ||||||||||||| ||| ||||||||||||||||||||||    
T  20694404 agacaacttgtacgttggacaaaaagttgcgttgtggtttggtgagggacaaaaat 20694459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 32181296 - 32181351
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||  | ||||||||||||||||||||||    
T  32181296 agacaacttgtacgtgggacaaaaagttgtactgtggtttggtgagggacaaaaat 32181351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 36743741 - 36743686
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | | ||||||||||||||||||||    
T  36743741 agacaacttgtacgtgggacaaaaagttgtgctgtagtttggtgagggacaaaaat 36743686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 37695594 - 37695539
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||| |||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  37695594 agacaacctgtacgtgggacaaaaagttgtgttgtggtttgatgagggacaaaaat 37695539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 37865786 - 37865841
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||||||  ||||||||||||||||||| || |||||||||||||||||||    
T  37865786 agacaacttgtacatgggacaaaaagttgtgttgtgatttggtgagggacaaaaat 37865841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 46680484 - 46680389
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| | || ||||||| |||||| ||||| |||||| ||||||||||    
T  46680484 cctccagtttgtcctgtacctgaaacagttttacaaatcaaacactgaacaactagaattgttctgtcctgtccttcattttttagcaaatcaaac 46680389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 54543023 - 54543077
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  54543023 agacaacttgtacgtgggacaaaa-gttgtgctatggtttggtgagggacaaaaat 54543077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 352 - 454
Target Start/End: Original strand, 29593009 - 29593111
Alignment:
Q  352 tccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacactc 451  Q
    ||||||||||  ||| ||| |||| ||||||||||||||||| || |||| || || |||||| |||||| ||||| |||||| |||||||||| ||| |    
T  29593009 tccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactgaaggtgttctgtcctgtccttcattttttagcaaatcaaacgcacac 29593108  T
Q  452 taa 454  Q
    |||    
T  29593109 taa 29593111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 53200697 - 53200639
Alignment:
Q  284 agacaacttgtatgtgggacaaaaa-gttgtgttatggtttggtgagggacaaaaattt 341  Q
    |||||||||||| |||||||||||| |||||| | ||||||||||||||||||||||||    
T  53200697 agacaacttgtacgtgggacaaaaaagttgtgctgtggtttggtgagggacaaaaattt 53200639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 454
Target Start/End: Complemental strand, 20517996 - 20517891
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttca-gtttttaacaaatcaaacaca 448  Q
    ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| | |||||||||| |||||| |||||  |||||| |||||||||| ||    
T  20517996 cctccagtttgtcttgtacctgaaacagttttacaaatcaaacactgaacaactagagttgttctgtcctgtccttcatttttttagcaaatcaaacgca 20517897  T
Q  449 ctctaa 454  Q
    | ||||    
T  20517896 ccctaa 20517891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 445
Target Start/End: Original strand, 29616300 - 29616373
Alignment:
Q  372 aaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||| ||||||||||||||||| || |||| | ||||||||||||| ||| ||||| |||||| ||||||||||    
T  29616300 aaacagttttacaaatcaaacactggacaactagagttgttctatcatgtccttcattttttagcaaatcaaac 29616373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 445
Target Start/End: Complemental strand, 38486310 - 38486136
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat--------ttatca-----ctttcctccagtttgttatgtccct 370  Q
    |||||||||||| ||  |||||||||||||| | ||||||||||||||||||||||        || |||     ||| |||||||||| |  ||| |||    
T  38486310 agacaacttgtacgttagacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttatcctgtacct 38486211  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| | |||||||||| || ||| ||||| |||||| ||||||||||    
T  38486210 gaaacagttttacaaatcaaacactggacaactagagttgttctgtcatgtccttcattttttagcaaatcaaac 38486136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 450
Target Start/End: Complemental strand, 20802505 - 20802405
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacac 449  Q
    ||||||||||||  ||| ||| |||| ||||||||||||||||| || | || |  ||||||||| |||| | ||||| ||||||||||||||||| |||    
T  20802505 cctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggataactaaagttgttctgtcctatccttcattttttaacaaatcaaacgcac 20802406  T
Q  450 t 450  Q
    |    
T  20802405 t 20802405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 23327951 - 23328007
Alignment:
Q  284 agacaacttgtatgtgggacaaaa-agttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||||||||||| ||||||||| ||||||| ||||||||||||||    
T  23327951 agacaacttgtacgtgggacaaaaaagttgtgttgtggtttgctgagggacaaaaat 23328007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 55593997 - 55594093
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttca-gtttttaacaaatcaaac 445  Q
    |||||||||| | |||| ||| |||| ||||||||||||||| | || |||| | |||||||||| ||||||||||||  |||||| ||||||||||    
T  55593997 cctccagtttatcatgtacctgaaacagttttacaaatcaaatactggacaactagagttgttctgtcctgttcttcatttttttagcaaatcaaac 55594093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 346 - 445
Target Start/End: Original strand, 1231419 - 1231518
Alignment:
Q  346 ctttcctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||| |||||||||| |  ||| ||| |||| ||||||||||||||||| || |||| | |||||||||| |||| | ||||| |||||| ||||||||||    
T  1231419 cttgcctccagtttatcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgttctgtcctatccttcattttttagcaaatcaaac 1231518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 2630004 - 2629949
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||| |||||||||||||| | |||| |||||||||||||||||    
T  2630004 agacaacttgtacgtgagacaaaaagttgtgatttggtctggtgagggacaaaaat 2629949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 2725185 - 2725131
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||| ||||||||||||| | ||||||||||||||||||||||    
T  2725185 agacaacttgtacgtgg-acaaaaagttgtgatgtggtttggtgagggacaaaaat 2725131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 4325824 - 4325879
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||||||||||||||||||||  ||||| ||||| |||||||||    
T  4325824 agacaacttgtacgtgggacaaaaagttgtgttgcggttttgtgagagacaaaaat 4325879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 4325903 - 4325998
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||| |||| ||| |||| ||||||||||||||||| || |||| | |||||||| | || ||| ||| | |||||| ||||||||||    
T  4325903 cctccagtttgtcatgtacctgaaacagttttacaaatcaaacactgaacaactagagttgttttgtcttgtactttattttttagcaaatcaaac 4325998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 445
Target Start/End: Original strand, 6776718 - 6776785
Alignment:
Q  378 ttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||||||| || |||| | |||||||||| |||||| ||||| |||||| ||||||||||    
T  6776718 ttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaac 6776785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 302 - 341
Target Start/End: Original strand, 7001903 - 7001942
Alignment:
Q  302 acaaaaagttgtgttatggtttggtgagggacaaaaattt 341  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  7001903 acaaaaagttgtgttgtggtttggtgagggacaaaaattt 7001942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 21580059 - 21580114
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||| ||||| ||| |||||||||||||| | ||||||||||||||||||||||    
T  21580059 agacaatttgtacgtgagacaaaaagttgtgatgtggtttggtgagggacaaaaat 21580114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 335
Target Start/End: Original strand, 24210352 - 24210403
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaa 335  Q
    |||||||||||| |||||| ||||||||||| | ||||||||||||||||||    
T  24210352 agacaacttgtacgtgggataaaaagttgtgctgtggtttggtgagggacaa 24210403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 449
Target Start/End: Original strand, 30942901 - 30942999
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacac 449  Q
    |||||| |||||| ||||||| |||| |||||| |||||||||| || | || |||||||||||| || | | ||| | |||||||||||||||||||||    
T  30942901 cctccaatttgttctgtccctgaaacagttttataaatcaaacactgaataactggagttgttctgtcttatcctt-attttttaacaaatcaaacacac 30942999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 34929948 - 34930003
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||||||| |||| |||||||||||| | ||||||||||||| ||||||||    
T  34929948 agacaacttgtatatggggcaaaaagttgtgctgtggtttggtgaggaacaaaaat 34930003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 36885965 - 36886020
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||| ||||| |||||| ||||||||||| | ||||||||||||||||||||||    
T  36885965 agacaatttgtacgtgggataaaaagttgtgctgtggtttggtgagggacaaaaat 36886020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 44324316 - 44324221
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||| |||||||  ||| ||| |||| ||||||||||||||||| || |||| |||||||||||| || ||| ||||| ||| || ||||||||||    
T  44324316 cctctagtttgtcctgtacctgaaacagttttacaaatcaaacactgaacaactggagttgttctgtcatgtccttcattttctagcaaatcaaac 44324221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 300 - 339
Target Start/End: Complemental strand, 47361450 - 47361411
Alignment:
Q  300 ggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  47361450 ggacaaaaagttgtgttgtggtttggtgagggacaaaaat 47361411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 354 - 445
Target Start/End: Complemental strand, 50727883 - 50727792
Alignment:
Q  354 cagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||| |||| ||| |||| ||||||||||||||||| |  |||| | |||||||||| || ||| ||||| |||||| ||||||||||    
T  50727883 cagtttgtcatgtacctgaaacagttttacaaatcaaacacttgacaactagagttgttctgtcatgtccttcattttttagcaaatcaaac 50727792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 354 - 445
Target Start/End: Complemental strand, 50735897 - 50735806
Alignment:
Q  354 cagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||| |||| ||| |||| ||||||||||||||||| |  |||| | |||||||||| || ||| ||||| |||||| ||||||||||    
T  50735897 cagtttgtcatgtacctgaaacagttttacaaatcaaacacttgacaactagagttgttctgtcatgtccttcattttttagcaaatcaaac 50735806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 346 - 445
Target Start/End: Original strand, 52949828 - 52949927
Alignment:
Q  346 ctttcctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||| ||||||||||||  ||| ||| |||| ||||||||||| ||||| || |||| | |||||||| | || ||| ||||| |||||||||||||||||    
T  52949828 cttgcctccagtttgtcctgtacctgaaacagttttacaaatgaaacactggacaactagagttgttttgtcgtgtccttcattttttaacaaatcaaac 52949927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 55593918 - 55593973
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||| ||||||||||| | |||||||||||||||| |||||    
T  55593918 agacaacttgtacgtgggataaaaagttgtgctgtggtttggtgagggactaaaat 55593973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 448
Target Start/End: Original strand, 20694483 - 20694581
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacaca 448  Q
    ||| ||||||||  ||| ||| |||| ||||||||||| ||||| || |||| | |||||||||| |  ||| |||||||||||| |||||||||||||    
T  20694483 ccttcagtttgtcctgtacctaaaacagttttacaaattaaacactggacaactagagttgttctgtgttgtccttcagtttttagcaaatcaaacaca 20694581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 445
Target Start/End: Original strand, 36497330 - 36497424
Alignment:
Q  351 ctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||  ||| ||| |||| ||||||||||||||||| || |||| | |||||||| | |||| | ||||| |||||| ||||||||||    
T  36497330 ctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgttttgtcctatccttcattttttagcaaatcaaac 36497424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 339
Target Start/End: Original strand, 42772834 - 42772876
Alignment:
Q  297 gtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||||||||||| ||||||||||| ||||||||||    
T  42772834 gtgggacaaaaagttgtgttgtggtttggtgaaggacaaaaat 42772876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 6973865 - 6973792
Alignment:
Q  372 aaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||| ||||||||||||||||| || ||||    |||||||||||||||| ||||| |||||| ||||||||||    
T  6973865 aaacagttttacaaatcaaacactggacaacaaaagttgttctatcctgtccttcattttttagcaaatcaaac 6973792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 50729595 - 50729538
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattt 341  Q
    |||||||||||| ||| |||||||||||||| | |||||||||||  |||||||||||    
T  50729595 agacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgatagacaaaaattt 50729538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 450
Target Start/End: Complemental strand, 25978585 - 25978486
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacac 449  Q
    |||||| ||||| |||||| | |||| ||||||||||||||||| || | ||||| ||||||| | || ||| ||| | ||||||||||||||||| |||    
T  25978585 cctccaatttgtcatgtcc-tgaaacagttttacaaatcaaacactggataattgaagttgttttgtcatgtcctttattttttaacaaatcaaacgcac 25978487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 445
Target Start/End: Original strand, 14296707 - 14296774
Alignment:
Q  378 ttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||||||| || |||||| |||||||| | |||||| ||| | |||||| ||||||||||    
T  14296707 ttttacaaatcaaacactggacaattagagttgttatgtcctgtcctttattttttagcaaatcaaac 14296774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 445
Target Start/End: Original strand, 14314955 - 14315022
Alignment:
Q  378 ttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||||||| || |||||| |||||||| | |||||| ||| | |||||| ||||||||||    
T  14314955 ttttacaaatcaaacactggacaattagagttgttatgtcctgtcctttattttttagcaaatcaaac 14315022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 20518075 - 20518020
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||||||||| ||||| || | || |||||||||||||||||||    
T  20518075 agacaacttgtacgtgggacaagaagttatgctgtgatttggtgagggacaaaaat 20518020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 421
Target Start/End: Original strand, 21202847 - 21202922
Alignment:
Q  346 ctttcctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgt 421  Q
    ||| ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| | |||||||||| ||||||    
T  21202847 cttgcctccagtttgtcctgtaccttaaacagttttacaaatcaaacactggacaactagagttgttctgtcctgt 21202922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 449
Target Start/End: Original strand, 24210431 - 24210530
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacac 449  Q
    ||||||||||||  ||| ||| |||| |||||||||||||||||  | |||||| |||||||||  |||| |  |||| |||||| ||||||||| ||||    
T  24210431 cctccagtttgtcctgtacctgaaacagttttacaaatcaaacaccggacaattagagttgttccgtcctatctttcattttttagcaaatcaaaaacac 24210530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 29592928 - 29592983
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||| ||||||||||||||||||||| | |||||| |||| | ||||||||    
T  29592928 agacaacttttatgtgggacaaaaagttgtgctgtggtttagtgaagtacaaaaat 29592983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 445
Target Start/End: Complemental strand, 29785510 - 29785415
Alignment:
Q  351 ctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttca-gtttttaacaaatcaaac 445  Q
    |||||||||||  ||| ||| |||| ||||||||||||||||| || |||| | |||||||||| || ||| |||||  |||||| ||||||||||    
T  29785510 ctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgttctgtcatgtccttcatttttttagcaaatcaaac 29785415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 36886044 - 36886139
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| | |||||||| | || ||| ||| | |||||| ||||||||||    
T  36886044 cctccagtttgtcttgtacctgaaacagttttacaaatcaaacactggacaactagagttgttttgtcttgtcctttattttttagcaaatcaaac 36886139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 445
Target Start/End: Original strand, 38812628 - 38812727
Alignment:
Q  346 ctttcctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||| ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| | |||||||| | |||||| ||| | |||||| ||||| ||||    
T  38812628 cttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgttatgtcctgtcctttattttttagcaaatgaaac 38812727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 41711880 - 41711935
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||| |||| ||| |||||||||||||  | ||||||||||||||||||||||    
T  41711880 agacaacctgtacgtgagacaaaaagttgtactgtggtttggtgagggacaaaaat 41711935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 46680563 - 46680508
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||| ||||| ||| |||||||||||||| | ||||||||| ||||||||||||    
T  46680563 agacaatttgtacgtgagacaaaaagttgtgctgtggtttggtaagggacaaaaat 46680508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 445
Target Start/End: Original strand, 50186668 - 50186735
Alignment:
Q  378 ttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||||||| || |||| | |||||||||| || ||| ||||| |||||| ||||||||||    
T  50186668 ttttacaaatcaaacactgaacaactagagttgttctttcttgtccttcattttttagcaaatcaaac 50186735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 339
Target Start/End: Original strand, 11056089 - 11056130
Alignment:
Q  298 tgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||| ||||||||||| ||||||||| ||||||||||||    
T  11056089 tgggacataaagttgtgttgtggtttggtaagggacaaaaat 11056130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 30942821 - 30942878
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattt 341  Q
    ||||||||| |||||| | ||||| |||||||| |||||||||||| |||| ||||||    
T  30942821 agacaacttatatgtgaggcaaaatgttgtgttgtggtttggtgagagacagaaattt 30942878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 342
Target Start/End: Original strand, 32858372 - 32858413
Alignment:
Q  301 gacaaaaagttgtgttatggtttggtgagggacaaaaattta 342  Q
    ||||||||||| ||||||||||| ||||||||||||| ||||    
T  32858372 gacaaaaagttatgttatggtttagtgagggacaaaatttta 32858413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 33552794 - 33552721
Alignment:
Q  372 aaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||| ||||||||||||||||| || |||| | |||||||| | |||||| ||| | |||||| ||||||||||    
T  33552794 aaacagttttacaaatcaaacactgaacaactagagttgttttgtcctgtcctttattttttagcaaatcaaac 33552721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 45577745 - 45577688
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattt 341  Q
    |||||||||| | |||||||||||||||||||| |||||| | |||| |||| |||||    
T  45577745 agacaacttgcacgtgggacaaaaagttgtgttgtggtttagcgaggaacaagaattt 45577688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 328
Target Start/End: Original strand, 3579157 - 3579201
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtga 328  Q
    |||||||||| |||| ||||||||||||||| |||||||| ||||    
T  3579157 agacaacttgaatgttggacaaaaagttgtgatatggtttagtga 3579201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 414
Target Start/End: Original strand, 26083447 - 26083515
Alignment:
Q  346 ctttcctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttct 414  Q
    ||| ||||||||||||| ||||||| ||||  |||||||||||||||| |  |||| || |||||||||    
T  26083447 cttgcctccagtttgttctgtccctgaaacaattttacaaatcaaacactaaacaactgaagttgttct 26083515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 47361388 - 47361292
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttca-gtttttaacaaatcaaac 445  Q
    ||||| ||||||  ||| ||| |||| ||||||||||||||||| || |||| |  ||||||||| |||||| |||||  |||||| ||||||||||    
T  47361388 cctccggtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactaaagttgttctgtcctgtccttcatttttttagcaaatcaaac 47361292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 50178546 - 50178490
Alignment:
Q  284 agacaacttgtatgtgggaca-aaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||| |||||||||| | ||||||| ||||| ||||||||    
T  50178546 agacaacttgtacgtgggacaaaaaagttgtgctgtggtttgctgaggcacaaaaat 50178490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 377 - 445
Target Start/End: Original strand, 54543128 - 54543195
Alignment:
Q  377 gttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||||||| || |||| | |||||||||| || || |||||| |||||| ||||||||||    
T  54543128 gttttacaaatcaaacactgaacaactagagttgttctgtcatg-tcttcattttttagcaaatcaaac 54543195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 454
Target Start/End: Original strand, 56154729 - 56154837
Alignment:
Q  346 ctttcctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||| |||||||||| |  ||| ||| |||| ||||||||||||||||| || |||| |  ||||||||| ||||   ||||| |||||| ||||||||||    
T  56154729 cttgcctccagtttttcctgtacctgaaacagttttacaaatcaaacactggacaactaaagttgttctgtcctaaccttcattttttagcaaatcaaac 56154828  T
Q  446 acactctaa 454  Q
     ||| ||||    
T  56154829 gcaccctaa 56154837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 4e-27; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 284 - 445
Target Start/End: Complemental strand, 29611130 - 29610956
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattta-------------tcactttcctccagtttgttatgtccct 370  Q
    ||||||||| || |||||||||||||||||||| |||||||| |||||||||||||||              || ||| ||||||||||||| |||||||    
T  29611130 agacaacttttacgtgggacaaaaagttgtgttgtggtttggcgagggacaaaaatttcagtttttgtcctgtcccttgcctccagtttgttctgtccct 29611031  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| |||||||||||||||||||| |||| || ||||||||| || ||| ||||| |||||||||||||||||    
T  29611030 gaaacagttttacaaatcaaacattggacaactgaagttgttctgtcatgtccttcattttttaacaaatcaaac 29610956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 288 - 445
Target Start/End: Original strand, 15001500 - 15001670
Alignment:
Q  288 aacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattta-------------tcactttcctccagtttgttatgtccctcaaa 374  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||              ||  || ||||||||||||  ||||||| |||    
T  15001500 aacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagtttttgttctgtctattgcctccagtttgtcctgtccctgaaa 15001599  T
Q  375 ctgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    | ||||||||||||||||| || |||| || ||||||||| |||||| ||||| |||||| ||||||||||    
T  15001600 cagttttacaaatcaaacactggacaactgaagttgttctgtcctgtccttcattttttatcaaatcaaac 15001670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 284 - 452
Target Start/End: Complemental strand, 12753400 - 12753219
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||             || ||| || ||| ||||||||  ||| |||    
T  12753400 agacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgaggaacaaaaatatgagtttttgtcttgtcatttgccttcagtttgtcctgtacct 12753301  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacactct 452  Q
     |||| || |||||||||||||| || |||| | |||||||| | |||||| ||||| |||||| |||||||||||||||||    
T  12753300 gaaacagtcttacaaatcaaacactggacaactagagttgttttgtcctgtccttcattttttagcaaatcaaacacactct 12753219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 284 - 445
Target Start/End: Complemental strand, 8673130 - 8672956
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||              | || ||| |||||||||||| |||| |||    
T  8673130 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcatgtacct 8673031  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| |  ||||||| | |||||| ||||| |||||| ||||||||||    
T  8673030 gaaacagttttacaaatcaaacactggacaactatagttgttttgtcctgtccttcattttttagcaaatcaaac 8672956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 284 - 445
Target Start/End: Original strand, 10467094 - 10467268
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||||| ||||||||             || || ||| ||||||||||||  ||| |||    
T  10467094 agacaacttgtacgtgggacaaaaagttgtgttgtggtttgctgaggaacaaaaatatcagtttttgtcttgtctcttgcctccagtttgtcctgtacct 10467193  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| | |||||||||| |||||| ||||| |||||| ||||||||||    
T  10467194 aaaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaac 10467268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 284 - 454
Target Start/End: Original strand, 27103989 - 27104172
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat--------ttatca-----ctttcctccagtttgttatgtccct 370  Q
    |||||||||||| ||||||||||||||||||   ||||||||||||||||||||||        || |||     ||| ||||||||||||  ||| |||    
T  27103989 agacaacttgtacgtgggacaaaaagttgtgcagtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtacct 27104088  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacactctaa 454  Q
     |||| |||||||||||||||||||| |||| | |||||||||| | |||| ||||| |||||| |||||||||| ||| ||||    
T  27104089 gaaacagttttacaaatcaaacattgaacaactagagttgttctgttctgtccttcattttttagcaaatcaaacgcaccctaa 27104172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 285 - 337
Target Start/End: Original strand, 17520626 - 17520678
Alignment:
Q  285 gacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaa 337  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17520626 gacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggacaaaa 17520678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 350 - 454
Target Start/End: Original strand, 35225771 - 35225875
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacac 449  Q
    ||||||||||||  ||||||| ||||||||||||||| |||||| || |||| |||||||||||| |||| | ||||| |||||| |||||||||| |||    
T  35225771 cctccagtttgtcctgtccctgaaactgttttacaaaccaaacactggacaactggagttgttctgtcctatccttcattttttatcaaatcaaacgcac 35225870  T
Q  450 tctaa 454  Q
     ||||    
T  35225871 cctaa 35225875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 7394889 - 7394834
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  7394889 agacaacttgtacgtgagacaaaaagttgtgttatggtttggtgagggacaaaaat 7394834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 29563301 - 29563246
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  29563301 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 29563246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 32303660 - 32303605
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  32303660 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 32303605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 4052510 - 4052565
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  4052510 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 4052565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 6386606 - 6386661
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||    
T  6386606 agacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaat 6386661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 14005119 - 14005064
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||    
T  14005119 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgatggacaaaaat 14005064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 21272714 - 21272769
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  21272714 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 21272769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 288 - 339
Target Start/End: Complemental strand, 29672394 - 29672343
Alignment:
Q  288 aacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  29672394 aacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 29672343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 30543097 - 30543042
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||    
T  30543097 agacaacttgtacgtgggacgaaaagttgtgttgtggtttggtgagggacaaaaat 30543042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 37664358 - 37664303
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  37664358 agacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 37664303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 41709886 - 41709981
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| | |||||||||| |||||| ||||| |||||| ||||||||||    
T  41709886 cctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaac 41709981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 284 - 445
Target Start/End: Original strand, 34101538 - 34101712
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||| | |||||||| |||| ||||||||||||||||||||||             || || ||| ||||||||||||  ||| |||    
T  34101538 agacaacttgtacgtggaaaaaaaagttatgttgtggtttggtgagggacaaaaatatgagtttttgtgttgtcccttgcctccagtttgtcctgtacct 34101637  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| | |||||||||| || ||| ||||| |||||| ||||||||||    
T  34101638 gaaacagttttacaaatcaaacactggacaactagagttgttctgtcttgtccttcattttttagcaaatcaaac 34101712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 284 - 445
Target Start/End: Original strand, 39642913 - 39643087
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    ||||||| |||| |||||||| ||||||||||| ||||||||||||||||||||||             || || ||| ||||||||||||  ||| |||    
T  39642913 agacaacctgtacgtgggacagaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttatcttgtcccttgcctccagtttgtcctgtacct 39643012  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| |||||| |||||||||| || |||| || ||||||||| || ||| ||||| |||||| ||||||||||    
T  39643013 gaaacagttttaaaaatcaaacactggacaactgaagttgttctgtcatgtccttcattttttagcaaatcaaac 39643087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 445
Target Start/End: Complemental strand, 32019995 - 32019902
Alignment:
Q  352 tccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||  ||| ||| |||| ||||||||||||||||| || |||| | |||||||||| |||||| ||||| |||||| ||||||||||    
T  32019995 tccagtttgtcctgtacctgaaacagttttacaaatcaaacactgaacaactagagttgttctgtcctgtccttcaatttttagcaaatcaaac 32019902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 452
Target Start/End: Original strand, 34063158 - 34063339
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||| | |||||||| |||||||||||||              | || ||| ||||||||||||  ||| |||    
T  34063158 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggcgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacct 34063257  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacactct 452  Q
     |||  ||||||||||||||||| || |||| | |||||||||| || ||| ||||| |||||| |||||||||| ||||||    
T  34063258 gaaagagttttacaaatcaaacactggacaactagagttgttctgtcatgtccttcattttttagcaaatcaaacgcactct 34063339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 339
Target Start/End: Complemental strand, 37618465 - 37618412
Alignment:
Q  286 acaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||||||||||||    
T  37618465 acaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaat 37618412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 30501178 - 30501230
Alignment:
Q  287 caacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  30501178 caacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 30501230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 446
Target Start/End: Original strand, 40389149 - 40389245
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaaca 446  Q
    ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| |||||||||||| || ||| ||||| ||| || |||||||||||    
T  40389149 cctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactggagttgttctgtcatgtccttcattttctagcaaatcaaaca 40389245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 7591443 - 7591348
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| || ||||||||| |||||| ||||| |||||| |||| |||||    
T  7591443 cctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactgaagttgttctgtcctgtccttcattttttagcaaaacaaac 7591348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 22999367 - 22999462
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||  ||| ||| |||| ||||||||||||||||| || ||||  ||||||||||| || ||| ||||| |||||| ||||||||||    
T  22999367 cctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaaccggagttgttctgtcatgtccttcattttttagcaaatcaaac 22999462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 31732094 - 31732149
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||||||| |||||||||||||  | ||||||||||||||||||||||    
T  31732094 agacaacttgtatgtgagacaaaaagttgtactgtggtttggtgagggacaaaaat 31732149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 37474809 - 37474904
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| |||||||||||| || | | ||||| |||||| ||||||||||    
T  37474809 cctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactggagttgttctgtcatatccttcattttttagcaaatcaaac 37474904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 41548727 - 41548822
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||| ||||  || |||| ||||||||||||||||| || |||| || ||||||||| |||||| ||||| |||||| ||||| ||||    
T  41548727 cctccagtttgtcatgtatctgaaacagttttacaaatcaaacactggacaactgaagttgttctgtcctgtccttcattttttagcaaattaaac 41548822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 45446485 - 45446540
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||| ||||||||    
T  45446485 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgaggaacaaaaat 45446540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 454
Target Start/End: Original strand, 38047482 - 38047559
Alignment:
Q  377 gttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacactctaa 454  Q
    ||||||||||||||||| || |||| | |||||||||| |||||| ||||| |||||| |||||||||| ||| ||||    
T  38047482 gttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaacgcaccctaa 38047559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 286 - 339
Target Start/End: Original strand, 40389072 - 40389125
Alignment:
Q  286 acaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||||||||||||||||||||||| | |||||||||||| || ||||||    
T  40389072 acaacttgtatgtgggacaaaaagttgtgctgtggtttggtgagagataaaaat 40389125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 445
Target Start/End: Complemental strand, 16485798 - 16485710
Alignment:
Q  357 tttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||| |||||||| ||||| |||||||||||||||| || |||| || | |||||||||| ||| ||||| | |||| ||||||||||    
T  16485798 tttgtcatgtccctgaaactattttacaaatcaaacactggacaactgaaattgttctatcatgtccttcattctttatcaaatcaaac 16485710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 3251731 - 3251676
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| || ||| ||||||||||| | ||||||||||||||||||||||    
T  3251731 agacaacttgtacgtaggataaaaagttgtgatgtggtttggtgagggacaaaaat 3251676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 346 - 445
Target Start/End: Original strand, 4052585 - 4052684
Alignment:
Q  346 ctttcctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||| |||||| |||||  ||| ||| |||| ||||||||||||||||| || |||| | |||||||||| |||||| ||| | |||||| ||||||||||    
T  4052585 cttgcctccaatttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtcctttattttttagcaaatcaaac 4052684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 30543018 - 30542923
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||| |||| ||| |||| ||||||||||||||||| || |||| |  ||||||| | || ||| ||||| |||||| ||||||||||    
T  30543018 cctccagtttgtcatgtacctgaaacagttttacaaatcaaacactggacaactaaagttgttatgtcatgtccttcattttttagcaaatcaaac 30542923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 31513658 - 31513603
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||||||  | ||||||||||||||| | ||||||||||||||||||||||    
T  31513658 agacaacttgtacctaggacaaaaagttgtgctgtggtttggtgagggacaaaaat 31513603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 32020076 - 32020021
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||| ||||||||||||| | ||||||||||||||| ||||||    
T  32020076 agacaacttgtacgtggaacaaaaagttgtgctgtggtttggtgagggataaaaat 32020021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 41548648 - 41548703
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||||| |||| || ||||| ||||||||    
T  41548648 agacaacttgtacgtgggacaaaaagttgtgttgtggtctgctgaggtacaaaaat 41548703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 288 - 339
Target Start/End: Original strand, 41709811 - 41709862
Alignment:
Q  288 aacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||| || ||||||||||||||| | ||||||||||||||||||||||    
T  41709811 aacttgtacgttggacaaaaagttgtgctgtggtttggtgagggacaaaaat 41709862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 445
Target Start/End: Original strand, 25478353 - 25478447
Alignment:
Q  351 ctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||  ||| ||| |||| ||||||||||| ||||| || |||| | |||||||| | |||||| ||||| |||||| ||||||||||    
T  25478353 ctccagtttgtcctgtacctgaaacagttttacaaattaaacactggacaactagagttgttatgtcctgtccttcattttttagcaaatcaaac 25478447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 450
Target Start/End: Original strand, 45114170 - 45114264
Alignment:
Q  356 gtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacact 450  Q
    ||||||| ||| ||| |||| ||||||||||||||||| || ||||||| ||||||  | |||||| |||||  ||||| |||||||||| ||||    
T  45114170 gtttgttctgtacctgaaacagttttacaaatcaaacactgaacaattgaagttgtcatgtcctgtccttcatgttttagcaaatcaaacgcact 45114264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 377 - 445
Target Start/End: Original strand, 31732186 - 31732254
Alignment:
Q  377 gttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||||||| || |||| |  ||||||||| |||||| ||||| |||||| ||||||||||    
T  31732186 gttttacaaatcaaacactggacaactaaagttgttctgtcctgtccttcattttttagcaaatcaaac 31732254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 340
Target Start/End: Original strand, 35225692 - 35225748
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaatt 340  Q
    ||||||||||||  || |||||||||||||| | |||||||| ||||||||||||||    
T  35225692 agacaacttgtacttgtgacaaaaagttgtgatgtggtttggcgagggacaaaaatt 35225748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 343
Target Start/End: Original strand, 54204 - 54259
Alignment:
Q  288 aacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaatttat 343  Q
    ||||||||||||||||||||||||||| | |||||| |  | ||||||||||||||    
T  54204 aacttgtatgtgggacaaaaagttgtgatgtggtttagcaaaggacaaaaatttat 54259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 5968860 - 5968765
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||| ||||||| |||| ||| |||| ||||||||||||||||| || |||| | |||||||| | |||| | ||||| |||||| ||||| ||||    
T  5968860 cctctagtttgtcatgtaccttaaacagttttacaaatcaaacactggacaactagagttgttttgtcctatccttcattttttagcaaattaaac 5968765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 5968939 - 5968884
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||| ||||| |||||| ||||||||||| | ||||||||||| ||||||||||    
T  5968939 agacaatttgtacgtgggataaaaagttgtgctgtggtttggtgaaggacaaaaat 5968884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 7591522 - 7591467
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||| || ||| |||||||||||||||| ||||||| ||||| ||||||||    
T  7591522 agacaacttatacgtgtgacaaaaagttgtgttgtggtttgctgaggcacaaaaat 7591467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 453
Target Start/End: Complemental strand, 10656682 - 10656579
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacac 449  Q
    |||| ||||||| ||||| || |||  | ||||||||||||| | || |||||||  ||||||||  | ||| ||||| |||||| ||||||||||||||    
T  10656682 cctctagtttgtcatgtctctaaaaaagatttacaaatcaaatactggacaattgaggttgttctgacatgtccttcattttttagcaaatcaaacacac 10656583  T
Q  450 tcta 453  Q
    ||||    
T  10656582 tcta 10656579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 13407010 - 13406955
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||| |||||||| || || | ||||||||||||||||||||||    
T  13407010 agacaacttgtacgtgagacaaaaaattatgctgtggtttggtgagggacaaaaat 13406955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 449
Target Start/End: Original strand, 17520731 - 17520802
Alignment:
Q  378 ttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacac 449  Q
    ||||||||||||||||  | |||| |||||||||||| || ||| ||||| |||||| ||||| ||||||||    
T  17520731 ttttacaaatcaaacaccggacaactggagttgttctgtcatgtccttcattttttagcaaattaaacacac 17520802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 17805721 - 17805776
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||| |||||| ||||||| | ||||||||||||| ||||||||    
T  17805721 agacaacttgtacgtgagacaaagagttgtgctttggtttggtgaggaacaaaaat 17805776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 25478273 - 25478328
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| || ||||||||||||||| | || |||| ||||||||||||||    
T  25478273 agacaacttgtacgtaggacaaaaagttgtgctgtgatttgatgagggacaaaaat 25478328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 445
Target Start/End: Original strand, 30501250 - 30501349
Alignment:
Q  346 ctttcctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||| ||||||||||||  ||| ||| |||| ||||||||||||||||| ||  ||| || |||||||||  | ||| ||||| |||||| ||||||||||    
T  30501250 cttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaacactgggcaactgaagttgttctgccatgtccttcattttttagcaaatcaaac 30501349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 31513579 - 31513484
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||| || | ||| ||||  |||||||||||||||| || | || | |||||||||| || ||| ||||| |||||| ||||||||||    
T  31513579 cctccagtttgtcatctacctgaaacaattttacaaatcaaacactggataactagagttgttctgtcatgtccttcattttttagcaaatcaaac 31513484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 37618388 - 37618293
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||| |||||  ||| ||| |||| |||||||||||||||||  | |||| |||||||||||| || ||| ||||| ||| || ||||||||||    
T  37618388 cctccaatttgtcctgtacctgaaacagttttacaaatcaaacaccggacaactggagttgttctgtcatgtccttcattttctagcaaatcaaac 37618293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 284 - 338
Target Start/End: Complemental strand, 10656761 - 10656707
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaa 338  Q
    |||||| ||||| ||| |||||||||||||||| |||||| |||| |||||||||    
T  10656761 agacaatttgtacgtgagacaaaaagttgtgttgtggttttgtgaaggacaaaaa 10656707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 343 - 445
Target Start/End: Original strand, 37861961 - 37862062
Alignment:
Q  343 tcactttcctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatca 442  Q
    |||||| ||||||||||||  ||| ||| |||| ||||||| |||||||||||| |||| | |||||| | | | |||| ||||| |||||| |||||||    
T  37861961 tcacttgcctccagtttgtcctgtacctgaaacagttttactaatcaaacattgaacaactagagttg-tatgttctgtccttcattttttagcaaatca 37862059  T
Q  443 aac 445  Q
    |||    
T  37862060 aac 37862062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 10320352 - 10320295
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattt 341  Q
    |||||||||||| ||| |  ||||||||||||| ||||||||||||||| || |||||    
T  10320352 agacaacttgtacgtgtggtaaaaagttgtgttgtggtttggtgagggataagaattt 10320295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 16595220 - 16595171
Alignment:
Q  288 aacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaa 337  Q
    |||||||| |||||||||||||||||||| ||| || | |||||||||||    
T  16595220 aacttgtacgtgggacaaaaagttgtgttgtggattagcgagggacaaaa 16595171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 339
Target Start/End: Complemental strand, 27109614 - 27109561
Alignment:
Q  286 acaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||| ||||| | |||||||||||||||||| ||||||||| ||| ||||||||    
T  27109614 acaatttgtacgcgggacaaaaagttgtgttgtggtttggtaaggaacaaaaat 27109561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 355 - 395
Target Start/End: Complemental strand, 10320270 - 10320230
Alignment:
Q  355 agtttgttatgtccctcaaactgttttacaaatcaaacatt 395  Q
    ||||||| |||||||| |||| |||||||||||||||||||    
T  10320270 agtttgtcatgtccctaaaacggttttacaaatcaaacatt 10320230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 340
Target Start/End: Complemental strand, 16485868 - 16485828
Alignment:
Q  300 ggacaaaaagttgtgttatggtttggtgagggacaaaaatt 340  Q
    ||||||||||||||| | |||||||| ||||||||||||||    
T  16485868 ggacaaaaagttgtgctgtggtttggcgagggacaaaaatt 16485828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 22999287 - 22999343
Alignment:
Q  284 agacaacttgtatgtgggacaaaaa-gttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||| ||||| |||||||||||| ||| || ||||||||| ||||||||||||||    
T  22999287 agacaagttgtacgtgggacaaaaaagttttgctatggtttgctgagggacaaaaat 22999343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 37664279 - 37664183
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttca-gtttttaacaaatcaaac 445  Q
    |||| |||||||  ||| ||| |||| ||||||||||||||||| || |||| | ||||| |||| |||||| |||||  |||||| ||||||||||    
T  37664279 cctctagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttattctgtcctgtccttcatttttttagcaaatcaaac 37664183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 4e-27; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 284 - 445
Target Start/End: Original strand, 28675821 - 28675995
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattt-------------atcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |             ||| ||| ||||||||||||  ||| |||    
T  28675821 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctatcccttgcctccagtttgtcctgtacct 28675920  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| | || ||||||| |||||||||||| |||||||||||||||||    
T  28675921 gaaacagttttacaaatcaaacactggacaactagaattgttctgtcctgttcttcattttttaacaaatcaaac 28675995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 284 - 459
Target Start/End: Original strand, 5442322 - 5442498
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaatt-tatcactttcctccagtttgttatgtccctcaaactgtttta 382  Q
    ||||| |||||| |||||||||||||||||| | || |||||||||||||||||| | | || ||| ||||||||||||  ||| ||| |||| | ||||    
T  5442322 agacagcttgtacgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaactctgtcccttgcctccagtttgtcttgtacctgaaacagcttta 5442421  T
Q  383 caaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacactctaacttat 459  Q
    ||||||||||| || |||| | |||||||||| || ||| ||||| |||||| |||||||||| ||| |||| ||||    
T  5442422 caaatcaaacactggacaactagagttgttctgtcatgtccttcattttttagcaaatcaaacgcaccctaagttat 5442498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 350 - 454
Target Start/End: Complemental strand, 22484718 - 22484614
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacac 449  Q
    |||||||||||| |||||||| ||||||||||||||||||| || || ||||||||||||||||| |||||| ||||| |||||| |||||||||| |||    
T  22484718 cctccagtttgtcatgtccctgaaactgttttacaaatcaatcactggacaattggagttgttctgtcctgtccttcattttttatcaaatcaaacgcac 22484619  T
Q  450 tctaa 454  Q
     ||||    
T  22484618 cctaa 22484614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 19906793 - 19906965
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattta-------------tcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||              || ||| ||||||||||||| |||||||    
T  19906793 agacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttgtcctgtcccttgcctccagtttgttctgtccct 19906892  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaa 443  Q
     ||||  |||||||||||||||| || |||| || ||||||| |||||||| ||||| |||||||||||||||    
T  19906893 gaaacaattttacaaatcaaacactggacaactgaagttgttttatcctgtccttcattttttaacaaatcaa 19906965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 284 - 445
Target Start/End: Original strand, 29584906 - 29585080
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||              | |||||| ||||||||||||  ||| |||    
T  29584906 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcacttgcctccagtttgtcctgtacct 29585005  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| | |||||||||| |||||| ||| | |||||| ||||||||||    
T  29585006 gaaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtcctttattttttagcaaatcaaac 29585080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 21373961 - 21374016
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  21373961 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 21374016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 24721595 - 24721690
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||| ||||||| |||| ||||||||||||||||| || |||| | |||||||||| || ||| ||||| |||||||||||| ||||    
T  24721595 cctccagtttgttctgtccctgaaacagttttacaaatcaaacactgaacaactagagttgttctgtcatgtccttcattttttaacaaattaaac 24721690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 40094613 - 40094708
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||| ||| ||| |||| ||||||||||||||||| || |||| | |||||||||| |||||| ||||| |||||| ||||||||||    
T  40094613 cctccagtttgttctgtacctgaaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaac 40094708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 445
Target Start/End: Complemental strand, 3867699 - 3867529
Alignment:
Q  288 aacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaatt-------------tatcactttcctccagtttgttatgtccctcaaa 374  Q
    |||||||| || ||||||||||||||| | |||||||||||||||||||||||             | || |||  ||||||| |||| ||||||| |||    
T  3867699 aacttgtacgtaggacaaaaagttgtgctgtggtttggtgagggacaaaaatttcaggttttgtcatgtctcttgtctccagtatgttctgtccctgaaa 3867600  T
Q  375 ctgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    | |||||||||||||||||  | |||| |||||||||||| || ||| ||||| |||||||||||||||||    
T  3867599 cagttttacaaatcaaacaccggacaactggagttgttctgtcttgtccttcattttttaacaaatcaaac 3867529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 284 - 449
Target Start/End: Original strand, 24571312 - 24571490
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattta-------------tcactttcctccagtttgttatgtccct 370  Q
    ||||||||||||  ||||||||||||||||| | |||||||||||||||||||||| |              || ||| ||||||||||||  ||| |||    
T  24571312 agacaacttgtacatgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcttgtacct 24571411  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacac 449  Q
     |||| ||||||||||||||||| || |||| | |||||||| | |||||| ||||| |||||| ||||||||||||||    
T  24571412 gaaacagttttacaaatcaaacactggacaactagagttgttttgtcctgtccttcattttttagcaaatcaaacacac 24571490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 445
Target Start/End: Complemental strand, 49748963 - 49748791
Alignment:
Q  286 acaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaa--------tttatca----cttt-cctccagtttgttatgtccctca 372  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||        ||| |||    |||| ||||||||||||  ||| ||| |    
T  49748963 acaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttgtcatgtcctttgcctccagtttgtcctgtacctga 49748864  T
Q  373 aactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||| ||||||||||||||||| |  |||| | ||||||||||||||| | ||||| ||| || ||||||||||    
T  49748863 aacagttttacaaatcaaacactaaacaacttgagttgttctatcctatccttcattttctagcaaatcaaac 49748791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 445
Target Start/End: Complemental strand, 51925260 - 51925088
Alignment:
Q  286 acaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaa--------tttatc----acttt-cctccagtttgttatgtccctca 372  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||        ||| ||     |||| |||||||||||| |||| ||| |    
T  51925260 acaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttgtcctgtcctttgcctccagtttgtcatgtacctga 51925161  T
Q  373 aactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||| ||||||||||| ||||| || |||| |||||||||||| |||| | ||||| ||| || ||||||||||    
T  51925160 aacagttttacaaattaaacactggacaactggagttgttctgtcctatccttcattttctagcaaatcaaac 51925088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 447
Target Start/End: Complemental strand, 1344761 - 1344585
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattta-------------tcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| ||| |||||||||||||| | |||||||||||||||||||||| |              || ||| ||||||||||||  ||| |||    
T  1344761 agacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttctgtcctgtcccttgcctccagtttgtcctgtacct 1344662  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacac 447  Q
     |||  ||||||||||||||||| || |||| | |||||||||| |||||| ||||| |||||| ||||||||||||    
T  1344661 gaaatagttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaacac 1344585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 440
Target Start/End: Original strand, 34026698 - 34026867
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaa--------tttatca-----ctttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||| ||||||| |||||||||||||||||||||        ||| |||     ||| ||||||||||||  | | |||    
T  34026698 agacaacttgtacgtgggacaaaaaattgtgttgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctatacct 34026797  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaat 440  Q
     |||| ||||||||||||||||| || |||| | |||||||||| |||||| ||||| |||||| |||||    
T  34026798 gaaacagttttacaaatcaaacactgaacaaatagagttgttctgtcctgtccttcattttttagcaaat 34026867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 3695282 - 3695187
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||| |||| ||| |||| ||||||||||||||||| || |||| | |||||||| | |||||| ||||| |||||| ||||||||||    
T  3695282 cctccagtttgtcatgtacctaaaacagttttacaaatcaaacactggacaactagagttgttttgtcctgtccttcattttttagcaaatcaaac 3695187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 3864729 - 3864674
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||||| |||||||| |||||||||||||    
T  3864729 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggcgagggacaaaaat 3864674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 4851510 - 4851455
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||    
T  4851510 agacaacttgtacgtgggacaaaaagttgtgttgtgggttggtgagggacaaaaat 4851455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 12349146 - 12349051
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| |||||||||| | |||||| ||||| |||||| ||||||||||    
T  12349146 cctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactggagttgttatgtcctgtccttcattttttagcaaatcaaac 12349051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 20609702 - 20609647
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  20609702 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 20609647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 21221414 - 21221359
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||    
T  21221414 agacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaat 21221359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 31882997 - 31882902
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| |||||||||||| || ||| ||||| |||||| ||||||||||    
T  31882997 cctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactggagttgttctgtcatgtccttcattttttagcaaatcaaac 31882902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 39052892 - 39052837
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||||| |||||||||||| |||||||||    
T  39052892 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagagacaaaaat 39052837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 42636457 - 42636402
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  42636457 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 42636402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 50386431 - 50386336
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||  ||| ||| |||| ||||||||||||||||| |  |||| |||||||||||| |||||| ||||| |||||| ||||||||||    
T  50386431 cctccagtttgtcctgtacctgaaacagttttacaaatcaaacactagacaactggagttgttctgtcctgtccttcattttttagcaaatcaaac 50386336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 284 - 445
Target Start/End: Original strand, 3964319 - 3964493
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattt-------------atcactttcctccagtttgttatgtccct 370  Q
    ||||||||||||  ||||||||||||||||| | ||||||||||||||||||||||||              |  ||| |||||| ||||| |||||| |    
T  3964319 agacaacttgtacatgggacaaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttgtccagttccttgcctccaatttgtcatgtccat 3964418  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| || ||||||||| |||| | ||||| |||||| ||||||||||    
T  3964419 gaaacagttttacaaatcaaacactggacaactgaagttgttctgtcctatccttcattttttatcaaatcaaac 3964493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 284 - 445
Target Start/End: Complemental strand, 51259834 - 51259660
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattta-------------tcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| ||||||||||||||||||   |||||||||||||||||||||| |              || ||| ||||||||||||  ||| |||    
T  51259834 agacaacttgtacgtgggacaaaaagttgtgccgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacct 51259735  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| | |||||||||| || ||| ||||| |||||| ||||||||||    
T  51259734 gaaacagttttacaaatcaaacactggacaactagagttgttctgtcatgtccttcattttttagcaaatcaaac 51259660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 372 - 445
Target Start/End: Original strand, 6179558 - 6179631
Alignment:
Q  372 aaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||||||||||||| || |||| |||||||||| |||||||| ||||| ||||||  |||||||||    
T  6179558 aaactgttttacaaatcaaacactggacaactggagttgttttatcctgtccttcattttttataaaatcaaac 6179631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 339
Target Start/End: Original strand, 29646099 - 29646152
Alignment:
Q  286 acaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  29646099 acaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 29646152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 34351422 - 34351365
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattt 341  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||||||||| |||||    
T  34351422 agacaacttgtatgtgcgacaaaaagttgtgttgtggtttgatgagggacaataattt 34351365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 284 - 449
Target Start/End: Original strand, 44267773 - 44267945
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaatttat--------cactttcctccagtttgttatgtccctcaaac 375  Q
    |||||| |||||||||||| |||||||| |||| |||||||| |||||||||  |||| |        | ||| ||| |||||||| || ||| | ||||    
T  44267773 agacaatttgtatgtgggataaaaagttatgttgtggtttggcgagggacaattattttttgtcatgtcccttacctacagtttgtcatatcc-taaaac 44267871  T
Q  376 tgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacac 449  Q
    ||||||||||||||||||| | |||| || |||||||| ||| ||| ||||| |||||| ||||| ||||||||    
T  44267872 tgttttacaaatcaaacatcgaacaactgaagttgttcgatcatgtccttcattttttatcaaataaaacacac 44267945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 2135180 - 2135275
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||| |||||||  ||| ||| |||| ||||||||||||||||| || |||| | |||||||||| |||||| ||||| |||||| ||||||||||    
T  2135180 cctctagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaac 2135275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 20255154 - 20255249
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| | |||||||||| || ||| ||||| |||||| ||||||||||    
T  20255154 cctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgttctgtcatgtccttcattttttagcaaatcaaac 20255249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 25860475 - 25860420
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||| |||||||||||||| | ||||||||||||||||||||||    
T  25860475 agacaacttgtacgtgagacaaaaagttgtgatgtggtttggtgagggacaaaaat 25860420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 25927381 - 25927326
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||||| || |||||| ||||||||||||    
T  25927381 agacaacttgtacgtgggacaaaaagttgtgttgtgttttggtaagggacaaaaat 25927326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 38213385 - 38213440
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||||| |||||| ||||| |||||||||    
T  38213385 agacaacttgtacgtgggacaaaaagttgtgttgtggtttcgtgagtgacaaaaat 38213440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 41683028 - 41682933
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| || ||||||| | |||||| ||||| |||||| ||||||||||    
T  41683028 cctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactgaagttgttttgtcctgtccttcattttttagcaaatcaaac 41682933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 44117049 - 44117144
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| | |||||||||| ||| || ||||| |||||| ||||||||||    
T  44117049 cctccagtttgtcctgtacctgaaacggttttacaaatcaaacactggacaactagagttgttctgtccagtccttcattttttagcaaatcaaac 44117144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 47958486 - 47958431
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | | ||||||||||||||||||||    
T  47958486 agacaacttgtacgtgggacaaaaagttgtgctgtagtttggtgagggacaaaaat 47958431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 50678829 - 50678884
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||| |||||||||    
T  50678829 agacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagagacaaaaat 50678884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 24721516 - 24721573
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattt 341  Q
    ||||||||||||||||||| ||||||||||||| ||||||| ||||| || |||||||    
T  24721516 agacaacttgtatgtgggataaaaagttgtgttgtggtttgttgaggtaccaaaattt 24721573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 339
Target Start/End: Original strand, 2135108 - 2135156
Alignment:
Q  291 ttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  2135108 ttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 2135156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 12349225 - 12349170
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||| ||||||||| | |||||||||||| |||||||||    
T  12349225 agacaacttgtacgtgggacataaagttgtgctgtggtttggtgagagacaaaaat 12349170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 20255076 - 20255130
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||||||||| |||||||| | ||||||||||||||||||||||    
T  20255076 agacaacttgta-gtgggacaagaagttgtgctgtggtttggtgagggacaaaaat 20255130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 31883076 - 31883021
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||| ||||| ||||||||    
T  31883076 agacaacttgtacgtgggacaaaaagttgtgctgtggtttgctgaggcacaaaaat 31883021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 33364753 - 33364658
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||  ||| ||| |||| ||||||||||| ||||| || |||| || ||||||||| || ||| ||||| |||||| ||||||||||    
T  33364753 cctccagtttgtcctgtacctgaaacagttttacaaataaaacactggacaactgaagttgttctgtcttgtccttcattttttagcaaatcaaac 33364658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 44116970 - 44117025
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||||||||||||||||||   ||||||| ||||||||||||||    
T  44116970 agacaacttgtacgtgggacaaaaagttgtgcagtggtttgatgagggacaaaaat 44117025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 51296612 - 51296667
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||||||  | ||||||||| ||||||| ||||||||||||||||||||||    
T  51296612 agacaacttgtacttaggacaaaaaattgtgttgtggtttggtgagggacaaaaat 51296667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 54622850 - 54622795
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||| ||||||||||||| |||||| ||||| |||||||||    
T  54622850 agacaacttgtacgtgggataaaaagttgtgttgtggtttcgtgagcgacaaaaat 54622795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 445
Target Start/End: Original strand, 10747311 - 10747405
Alignment:
Q  351 ctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||  ||| ||| |||  ||||||||||||||||| || |||| || | ||||| | |||||| ||||| |||||||||||||||||    
T  10747311 ctccagtttgtcctgtacctaaaatagttttacaaatcaaacactgaacaactgaaattgttttgtcctgtccttcattttttaacaaatcaaac 10747405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 353 - 427
Target Start/End: Complemental strand, 20609620 - 20609546
Alignment:
Q  353 ccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttca 427  Q
    |||||||||  ||| ||| |||| |||||||||||||||||||| |||| | |||||||||| |||||| |||||    
T  20609620 ccagtttgtcctgtacctgaaacagttttacaaatcaaacattggacaactagagttgttctgtcctgtccttca 20609546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 444
Target Start/End: Complemental strand, 42636378 - 42636284
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaa 444  Q
    ||||||||||||  | | ||| |||| ||||||||||||||||| || |||| | || ||||||| |||||| ||||| |||||| |||||||||    
T  42636378 cctccagtttgtcctatacctaaaacagttttacaaatcaaacactggacaactagaattgttctgtcctgtccttcattttttagcaaatcaaa 42636284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 21221314 - 21221241
Alignment:
Q  372 aaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||| ||||||||||||||| |||| |||| | |||||||||| |||||| ||| | |||||| ||||||||||    
T  21221314 aaacagttttacaaatcaaatattggacaactagagttgttctgtcctgtcctttattttttagcaaatcaaac 21221241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 25927280 - 25927207
Alignment:
Q  372 aaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||| |||||||||||||||||||  |||| | |||||||||| |||||| | ||| |||||| ||||||||||    
T  25927280 aaacagttttacaaatcaaacattagacaactagagttgttctgtcctgtccatcattttttagcaaatcaaac 25927207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 45690859 - 45690786
Alignment:
Q  372 aaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||| ||||| ||||||||||| || |||| || |||||||||||||||| ||||| ||| || ||||||||||    
T  45690859 aaacagttttgcaaatcaaacactggacaactgaagttgttctatcctgtccttcactttatagcaaatcaaac 45690786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 284 - 337
Target Start/End: Complemental strand, 53557849 - 53557796
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaa 337  Q
    |||||||||||| ||| ||||||||||||||   ||||||||||||||||||||    
T  53557849 agacaacttgtacgtgagacaaaaagttgtgcagtggtttggtgagggacaaaa 53557796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 316
Target Start/End: Complemental strand, 41694955 - 41694923
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgtt 316  Q
    |||||||||||||||||||||||||||||||||    
T  41694955 agacaacttgtatgtgggacaaaaagttgtgtt 41694923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 377 - 445
Target Start/End: Original strand, 43175612 - 43175680
Alignment:
Q  377 gttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||||||| || |||| | |||||||||| | |||| ||||| |||||| ||||||||||    
T  43175612 gttttacaaatcaaacactggacaactagagttgttctgttctgtccttcattttttagcaaatcaaac 43175680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 26282441 - 26282386
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||| || |||||||||||||||||| | ||||||| |||| |||||||||    
T  26282441 agacaacttatacgtgggacaaaaagttgtgctgtggtttgatgagagacaaaaat 26282386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 33364832 - 33364777
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||| |||||||||||||| | ||||||| |||||| |||||||    
T  33364832 agacaacttgtacgtgagacaaaaagttgtgatgtggtttgctgaggggcaaaaat 33364777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 445
Target Start/End: Original strand, 38213492 - 38213559
Alignment:
Q  378 ttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||||||| || |||| | |||||||||||||||||  |||| |||||| ||||| ||||    
T  38213492 ttttacaaatcaaacactggacaactagagttgttctatcctgtctttcattttttagcaaataaaac 38213559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 40094534 - 40094589
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||| ||||| |||  ||||||||||||| | ||||||||||||||||||||||    
T  40094534 agacaatttgtacgtgaaacaaaaagttgtgatgtggtttggtgagggacaaaaat 40094589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 50386510 - 50386455
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| || ||||||||||||||| | ||||||| ||||| ||||||||    
T  50386510 agacaacttgtacgtaggacaaaaagttgtgctgtggtttgttgaggcacaaaaat 50386455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 452
Target Start/End: Complemental strand, 47958379 - 47958305
Alignment:
Q  378 ttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacactct 452  Q
    |||||||||||||||| || |||| | |||||||||||| |||| | ||  |||||| |||||||||| ||||||    
T  47958379 ttttacaaatcaaacactggacaactagagttgttctatactgtccatcgttttttagcaaatcaaacgcactct 47958305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 350 - 444
Target Start/End: Complemental strand, 53557770 - 53557676
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaa 444  Q
    ||||||||||||  ||| ||| |||| |||||||||||||||||||| |||| | |||||| ||| || | | ||| | |||||| |||||||||    
T  53557770 cctccagtttgtcctgtacctaaaacagttttacaaatcaaacattgaacaactagagttgctctgtcatatcctttattttttagcaaatcaaa 53557676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 329
Target Start/End: Complemental strand, 3695346 - 3695301
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgag 329  Q
    |||||||||||| ||||||||||| |||||| | ||||||||||||    
T  3695346 agacaacttgtacgtgggacaaaaggttgtgatgtggtttggtgag 3695301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 337
Target Start/End: Complemental strand, 14155514 - 14155461
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaa 337  Q
    ||||||||||||  || ||||||||||||||||||| ||| |||||||| ||||    
T  14155514 agacaacttgtacttgagacaaaaagttgtgttatgatttagtgagggataaaa 14155461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 52300468 - 52300524
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattt 341  Q
    ||||||||||||  ||||||||||| ||| ||| ||||||||||| ||||||||||||    
T  52300468 agacaacttgtac-tgggacaaaaaattgcgttgtggtttggtgatggacaaaaattt 52300524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 340
Target Start/End: Complemental strand, 22484797 - 22484741
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaatt 340  Q
    ||||||||| || |||||||||||||||||||| | ||||||  ||| |||||||||    
T  22484797 agacaacttatacgtgggacaaaaagttgtgttgtagtttggcaaggaacaaaaatt 22484741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 414
Target Start/End: Complemental strand, 25860396 - 25860332
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttct 414  Q
    ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| | ||||||||||    
T  25860396 cctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgttct 25860332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 395
Target Start/End: Complemental strand, 34351346 - 34351298
Alignment:
Q  347 tttcctccagtttgttatgtccctcaaactgttttacaaatcaaacatt 395  Q
    ||||||| ||||||| |||||||| |||| |||||||||||||| ||||    
T  34351346 tttcctctagtttgtcatgtccctgaaacagttttacaaatcaatcatt 34351298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 414
Target Start/End: Original strand, 51296691 - 51296755
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttct 414  Q
    ||||||||||||  ||| ||| |||| ||||||||||| ||||| || |||||| ||||||||||    
T  51296691 cctccagtttgtcctgtacctgaaacagttttacaaattaaacactggacaattagagttgttct 51296755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 6e-26; HSPs: 72)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 284 - 451
Target Start/End: Original strand, 1601212 - 1601389
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaa-----------tttatcactttcctccagtttgttatgtccctca 372  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||           | |||| ||| ||||||||||||  ||| ||| |    
T  1601212 agacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatgagtttttgttctatcccttgcctccagtttgtcctgtacctga 1601311  T
Q  373 aactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacactc 451  Q
    ||| ||||||||||||||||| || |||| |  ||||||||| || ||||||||| |||||| |||||||||| |||||    
T  1601312 aaccgttttacaaatcaaacactgaacaactaaagttgttctgtcatgttcttca-tttttagcaaatcaaacgcactc 1601389  T

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Target: chr1; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 284 - 445
Target Start/End: Original strand, 16451166 - 16451340
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||              | || ||| ||||||||||||  ||| |||    
T  16451166 agacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagagacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacct 16451265  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| |||||||||||||||||||| |||| | |||||||| | |||||| ||||| |||||||||||||||||    
T  16451266 gaaacagttttacaaatcaaacattggacaactagagttgttatgtcctgtccttcattttttaacaaatcaaac 16451340  T

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Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 350 - 454
Target Start/End: Complemental strand, 15539946 - 15539842
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacac 449  Q
    ||||||||||||| ||||| | |||| ||||||||||||||||| || |||| |||||||||||| |||||| ||||| ||||||||||||||||| |||    
T  15539946 cctccagtttgttctgtccttgaaacagttttacaaatcaaacactggacaactggagttgttctgtcctgtccttcattttttaacaaatcaaacgcac 15539847  T
Q  450 tctaa 454  Q
     ||||    
T  15539846 cctaa 15539842  T

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Target: chr1; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 284 - 445
Target Start/End: Complemental strand, 6029436 - 6029257
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaatt-------------tatcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||             | || ||| ||| ||||||||| |||||||    
T  6029436 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagtttttgtcctgtcccttgccttcagtttgttctgtccct 6029337  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgtt-----ctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| ||||||||||     || |||||| ||||| |||||||||||||||||    
T  6029336 gaaacagttttacaaatcaaacactggacaactggagttgttctgtcctgtcctgtccttcattttttaacaaatcaaac 6029257  T

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Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 350 - 448
Target Start/End: Complemental strand, 6144042 - 6143944
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacaca 448  Q
    |||||||||||| ||||| || ||||||||||||||||||||||||| |||| || ||||||||| |||||| ||||| ||| || |||||||||||||    
T  6144042 cctccagtttgtcatgtctctgaaactgttttacaaatcaaacattggacaactgcagttgttctgtcctgtccttcattttgtatcaaatcaaacaca 6143944  T

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Target: chr1; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 284 - 445
Target Start/End: Complemental strand, 1351570 - 1351396
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaa--------tttatc-----actttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||        ||| ||      ||| ||||||||||||  ||| |||    
T  1351570 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgcctccagtttgtcctgtacct 1351471  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| | |||||||||| |||||| ||||| |||||| ||||||||||    
T  1351470 gaaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaac 1351396  T

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Target: chr1; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 347 - 452
Target Start/End: Original strand, 8839012 - 8839117
Alignment:
Q  347 tttcctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaaca 446  Q
    |||||||||||||||  ||| ||  |||| |||||||||||||||||||| ||||||||||||||||| || ||| ||||| |||||| ||||||||||     
T  8839012 tttcctccagtttgtcttgtaccagaaacagttttacaaatcaaacattggacaattggagttgttctgtcttgtccttcattttttagcaaatcaaacg 8839111  T
Q  447 cactct 452  Q
    ||||||    
T  8839112 cactct 8839117  T

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Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 284 - 445
Target Start/End: Original strand, 31004171 - 31004345
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaa------tt-------tatcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||      ||       | || | | ||||||||||||  ||| |||    
T  31004171 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaacatcagtttttgtcctgtcccgtgcctccagtttgtcctgtacct 31004270  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| || ||||||||| |||||| ||||| |||||| ||||||||||    
T  31004271 gaaacagttttacaaatcaaacactggacaactgaagttgttctgtcctgtccttcattttttagcaaatcaaac 31004345  T

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Target: chr1; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 286 - 445
Target Start/End: Original strand, 51264536 - 51264708
Alignment:
Q  286 acaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccctca 372  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||             || || ||| ||||||||||||  ||| ||| |    
T  51264536 acaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcctgtacctga 51264635  T
Q  373 aactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||| ||||||||||||||||| || |||| | ||||| |||| || ||| ||||| |||||| ||||||||||    
T  51264636 aacagttttacaaatcaaacactggacaactagagttattctgtcttgtccttcattttttagcaaatcaaac 51264708  T

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Target: chr1; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 454
Target Start/End: Complemental strand, 844859 - 844676
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||              | || ||| |||| |||||||  ||| |||    
T  844859 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacct 844760  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacactctaa 454  Q
     |||| ||||||||||||||||| || |||| | |||||||||| |||||| ||||| |||||| |||||||||| ||| ||||    
T  844759 gaaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaacgcaccctaa 844676  T

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Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 444
Target Start/End: Original strand, 16437401 - 16437574
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat--------ttatca----cttt-cctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||        || ||     |||| |||| |||||||  |||  ||    
T  16437401 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcctttgcctctagtttgtcctgtagct 16437500  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaa 444  Q
     |||| |||||||||||||||||||| |||| | |||||||||||| |||| ||||| |||||| |||||||||    
T  16437501 gaaacagttttacaaatcaaacattggacaactagagttgttctattctgtccttcattttttagcaaatcaaa 16437574  T

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Target: chr1; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 45491010 - 45490955
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  45491010 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 45490955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 50304769 - 50304864
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| |||||||||||| |||||| ||||| |||||| ||||||||||    
T  50304769 cctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactggagttgttctgtcctgtccttcattttttagcaaatcaaac 50304864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 284 - 445
Target Start/End: Complemental strand, 6711181 - 6711007
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||              | || ||| |||| |||||||  ||| |||    
T  6711181 agacaacttgtacgtgggacaaaaaattgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacct 6711082  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| | |||||||||| |||||| ||||| |||||| ||||||||||    
T  6711081 gaaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaac 6711007  T

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Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 284 - 421
Target Start/End: Original strand, 16704765 - 16704915
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaatttat-------------cactttcctccagtttgttatgtccct 370  Q
    |||||||||||||||| |||||| ||||||| | ||||||||| |||||||||||| |||             | ||| |||||||||||| |||| |||    
T  16704765 agacaacttgtatgtgagacaaagagttgtgatgtggtttggtaagggacaaaaatatatgtttttgtcgtgtcccttgcctccagtttgtcatgtacct 16704864  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgt 421  Q
     |||| |||||||||||||||||||| ||||||| ||||||||| ||||||    
T  16704865 gaaacagttttacaaatcaaacattggacaattgaagttgttctgtcctgt 16704915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 286 - 339
Target Start/End: Original strand, 25539896 - 25539949
Alignment:
Q  286 acaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  25539896 acaacttgtaggtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 25539949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 284 - 448
Target Start/End: Original strand, 32270392 - 32270569
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattta-------------tcactttcctccagtttgttatgtccct 370  Q
    ||||||||||||  ||||||||||||||||| | |||||||||||||||||||||| |              || ||| ||||||||||||  | | |||    
T  32270392 agacaacttgtacatgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctctacct 32270491  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacaca 448  Q
     |||| ||||||||||||||||| || |||| | |||||||||| |||||| ||||| |||||| |||||||||||||    
T  32270492 gaaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaacaca 32270569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 284 - 445
Target Start/End: Original strand, 41972950 - 41973124
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat--------ttatca-----ctttcctccagtttgttatgtccct 370  Q
    |||||||||||| ||| |||||||||||||  | ||||||||||||||||||||||        || |||     ||| ||||||||||||  |||  ||    
T  41972950 agacaacttgtacgtgagacaaaaagttgtagtgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtatct 41973049  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| | ||||||||||||||||| ||||| |||||| ||||||||||    
T  41973050 gaaacagttttacaaatcaaacactggacaactagagttgttctatcctgtccttcattttttagcaaatcaaac 41973124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 50382538 - 50382481
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattt 341  Q
    |||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||    
T  50382538 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgaaggacaaaaattt 50382481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 445
Target Start/End: Original strand, 38663171 - 38663320
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaatttatcactttcctccagtttgttatgtccctcaaactgttttac 383  Q
    |||||||||||| |||||||||||||||||| | ||||||| ||||||||||||||             ||||||| |  ||||| | |||| |||||||    
T  38663171 agacaacttgtacgtgggacaaaaagttgtgctgtggtttgctgagggacaaaaat------------accagtttatcctgtccttgaaacagttttac 38663258  T
Q  384 aaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||| || |||| |||||||||||| || ||| ||||| |||||| ||||||||||    
T  38663259 aaatcaaacactggacaactggagttgttctgtcttgtccttcattttttagcaaatcaaac 38663320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 16386893 - 16386948
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  16386893 agacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 16386948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 17887987 - 17888042
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||||| |||||||| |||||||||||||    
T  17887987 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggcgagggacaaaaat 17888042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 26764930 - 26764875
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||    
T  26764930 agacaacttgtacgtgggacaaaaagttgtgttgtggttcggtgagggacaaaaat 26764875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 42705373 - 42705318
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||    
T  42705373 agacaacttgtacgtgggacgaaaagttgtgttgtggtttggtgagggacaaaaat 42705318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 44738177 - 44738122
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  44738177 agacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 44738122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 284 - 445
Target Start/End: Complemental strand, 28340438 - 28340265
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| ||| |||||||||||||| | ||||||| ||||||||||||||             || || ||| ||||||||||||  ||| |||    
T  28340438 agacaacttgtacgtgagacaaaaagttgtgctgtggtttgatgagggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcttgtacct 28340339  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| | ||||||||||||||||| ||| | |||||| ||||||||||    
T  28340338 gaaacagttttacaaatcaaacactggacaactagagttgttctatcctgtcctt-attttttagcaaatcaaac 28340265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 284 - 445
Target Start/End: Complemental strand, 35387446 - 35387272
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattta-------------tcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||| ||||||||||||| | |||||||||||||||||||||| |              || ||| ||||||||||||  ||| |||    
T  35387446 agacaacttgtacgtggaacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttacctccagtttgtcctgtacct 35387347  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| | |||||||||| || ||| ||||| |||||| ||||||||||    
T  35387346 gaaacagttttacaaatcaaacactggacaactagagttgttctgtcatgtccttcattttttagcaaatcaaac 35387272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 13994210 - 13994153
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattt 341  Q
    ||||||||||||  || |||||||||||||||| ||||||||||||||||||||||||    
T  13994210 agacaacttgtacatgagacaaaaagttgtgttgtggtttggtgagggacaaaaattt 13994153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 339
Target Start/End: Original strand, 45658862 - 45658915
Alignment:
Q  286 acaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||| |||||||||||||||||||| |||||||||||| |||||||||    
T  45658862 acaacttgtaggtgggacaaaaagttgtgttgtggtttggtgagcgacaaaaat 45658915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 450
Target Start/End: Original strand, 5109846 - 5109946
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacac 449  Q
    |||||| |||||  ||| ||| |||| ||||||||||||||||| || |||| |||||||||||| |||||  ||||| |||||| |||||||||| |||    
T  5109846 cctccaatttgtcttgtacctgaaacagttttacaaatcaaacactgaacaactggagttgttctgtcctgcacttcattttttagcaaatcaaacgcac 5109945  T
Q  450 t 450  Q
    |    
T  5109946 t 5109946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 286 - 445
Target Start/End: Complemental strand, 32289477 - 32289305
Alignment:
Q  286 acaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccctca 372  Q
    |||||||||| |||| ||||||||||||| | ||||||||||||||||||||||             || || ||| |||||| |||||  ||| ||| |    
T  32289477 acaacttgtacgtggaacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcttgtcccttgcctccaatttgtcctgtacctga 32289378  T
Q  373 aactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||| ||||||||||||||||| || |||| | |||||||||| || ||| ||||| |||||| ||||||||||    
T  32289377 aacagttttacaaatcaaacactggacaactagagttgttctgtcttgtccttcattttttagcaaatcaaac 32289305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 7183957 - 7184012
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| || ||||||||||||||||| ||||||||| ||||||||||||    
T  7183957 agacaacttgtacgtaggacaaaaagttgtgttgtggtttggtaagggacaaaaat 7184012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 12890277 - 12890332
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||| ||||||||||||||    
T  12890277 agacaacttgtacgtgggacaaaaagttgtgctgtggtttgatgagggacaaaaat 12890332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 16476290 - 16476235
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||||||||||||||||||   ||||||||||||||||||||||    
T  16476290 agacaacttgtacgtgggacaaaaagttgtgccgtggtttggtgagggacaaaaat 16476235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 21071732 - 21071827
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||| |||| ||| ||||  |||||||||||||||| || ||||||| ||||||||| || ||| ||||| | |||| ||||||||||    
T  21071732 cctccagtttgtcatgtacctgaaacaattttacaaatcaaacactggacaattgaagttgttctgtcatgtacttcattctttagcaaatcaaac 21071827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 445
Target Start/End: Complemental strand, 24339774 - 24339599
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatgg-tttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccc 369  Q
    |||||||||||| |||||| ||||||||||||| ||| |||||||||||||||||||              | || ||| |||||||||||| |||| ||    
T  24339774 agacaacttgtacgtgggaaaaaaagttgtgttgtggttttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcatgtacc 24339675  T
Q  370 tcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    | |||| ||| ||||||||||||| || |||| | |||||||||| |||||| ||| | |||||| ||||||||||    
T  24339674 tgaaacagttatacaaatcaaacactgaacaactagagttgttctgtcctgtcctttattttttagcaaatcaaac 24339599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 30105815 - 30105760
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||||||||||||||| || | ||||||||||||||||||||||    
T  30105815 agacaacttgtacgtgggacaaaaagttatgctgtggtttggtgagggacaaaaat 30105760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 41967984 - 41967929
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||| |||||||||||||||| ||||||||| ||||||||||||    
T  41967984 agacaacttgtacgtgagacaaaaagttgtgttgtggtttggtaagggacaaaaat 41967929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 42510564 - 42510619
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | |||||||||||| |||||||||    
T  42510564 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagagacaaaaat 42510619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 42512826 - 42512731
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| || ||||||||| |||||| ||| | |||||| ||||||||||    
T  42512826 cctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactgaagttgttctgtcctgtcctttattttttagcaaatcaaac 42512731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 449
Target Start/End: Original strand, 46155053 - 46155124
Alignment:
Q  378 ttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacac 449  Q
    |||||||||||||||| || |||||| |||||||||| || ||| ||||| |||||| ||||||||||||||    
T  46155053 ttttacaaatcaaacactgaacaattagagttgttctgtcatgtccttcattttttagcaaatcaaacacac 46155124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 50540383 - 50540438
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||| ||||||||||    
T  50540383 agacaacttgtacgtgggacaaaaagttgtgttgtggtttgatgaaggacaaaaat 50540438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 337
Target Start/End: Complemental strand, 504526 - 504473
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaa 337  Q
    ||||||||| ||||||||||||||| |||||||||||||| ||||| |||||||    
T  504526 agacaacttctatgtgggacaaaaaattgtgttatggtttagtgagagacaaaa 504473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 286 - 339
Target Start/End: Complemental strand, 11772765 - 11772712
Alignment:
Q  286 acaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||| ||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  11772765 acaatttgtaggtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 11772712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 26118350 - 26118295
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||| || |||||||||||||||||| | || |||||||||||||||||||    
T  26118350 agacaacttttacgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaat 26118295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 433
Target Start/End: Complemental strand, 30105736 - 30105653
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagttttt 433  Q
    ||||||||||||  | | ||| |||| ||||||||||||||||| || |||| | ||||||||||||||||| ||||| |||||    
T  30105736 cctccagtttgtcctttacctgaaacagttttacaaatcaaacactggacaactagagttgttctatcctgtccttcatttttt 30105653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 39281933 - 39281988
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| || ||||||||||||||  | ||||||||||||||||||||||    
T  39281933 agacaacttgtacgtaggacaaaaagttgtactgtggtttggtgagggacaaaaat 39281988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 338
Target Start/End: Original strand, 5109767 - 5109821
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaa 338  Q
    ||||||||||||  | ||||||||||||||| | |||||||||||||||||||||    
T  5109767 agacaacttgtactttggacaaaaagttgtgatgtggtttggtgagggacaaaaa 5109821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 454
Target Start/End: Complemental strand, 11772666 - 11772584
Alignment:
Q  372 aaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacactctaa 454  Q
    |||| ||||||||||||||||| || |||| |||||||||| | |||||| ||||| ||| || |||||||||| ||| ||||    
T  11772666 aaacagttttacaaatcaaacactggacaactggagttgttatgtcctgtccttcattttctagcaaatcaaacgcaccctaa 11772584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 445
Target Start/End: Original strand, 42510644 - 42510738
Alignment:
Q  351 ctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||  ||| ||| |||| ||||||| ||||||||| || |||| | ||||||| || |||||| ||||| |||||| ||||||||||    
T  42510644 ctccagtttgtcctgtacctgaaacagttttacgaatcaaacactggacaactagagttgtcctgtcctgtccttcattttttagcaaatcaaac 42510738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 340
Target Start/End: Complemental strand, 6144121 - 6144065
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaatt 340  Q
    ||||||||| || |||||| ||||||||||||| |||||||  ||||||||||||||    
T  6144121 agacaacttctacgtgggagaaaaagttgtgttgtggtttgccgagggacaaaaatt 6144065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 442
Target Start/End: Complemental strand, 26118271 - 26118179
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatca 442  Q
    ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| | |||||||| | || ||| ||||| |||||| |||||||    
T  26118271 cctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgttatgtcatgtccttcattttttagcaaatca 26118179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 393
Target Start/End: Complemental strand, 50382457 - 50382413
Alignment:
Q  349 tcctccagtttgttatgtccctcaaactgttttacaaatcaaaca 393  Q
    |||||||||||||||||||||| |||| |||||| ||||||||||    
T  50382457 tcctccagtttgttatgtccctgaaacagttttaaaaatcaaaca 50382413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 417
Target Start/End: Original strand, 7837251 - 7837318
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatc 417  Q
    |||| ||||||| |||| ||| |||| ||||||||||||||||| || |||| || ||||||||||||    
T  7837251 cctctagtttgtcatgttcctgaaacagttttacaaatcaaacactgaacaactgaagttgttctatc 7837318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 38087131 - 38087076
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||||||  ||||||||||||||||| | |||||| |||| ||||||||||    
T  38087131 agacaacttgtacttgggacaaaaagttgtgatgtggtttagtgaaggacaaaaat 38087076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 42512905 - 42512850
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||| ||||| || ||||||||||||||||| ||||||| ||||| ||||||||    
T  42512905 agacaatttgtacgtaggacaaaaagttgtgttgtggtttgctgaggcacaaaaat 42512850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 45490931 - 45490836
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||  ||| | | |||| ||||||||||||||||| || |||| | || ||||||| ||||||  |||| |||||| ||||||||||    
T  45490931 cctccagtttgtcctgtacttgaaacagttttacaaatcaaacactggacaactagaattgttctgtcctgtctttcattttttagcaaatcaaac 45490836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 51703298 - 51703244
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||| |||| |||||||||||||||||||| ||| ||||||||| ||||||||    
T  51703298 agacaacatgtaggtgggacaaaaagttgtgttgtgg-ttggtgaggaacaaaaat 51703244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 6771410 - 6771464
Alignment:
Q  287 caacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattt 341  Q
    |||||||||||||||| ||||||||||||| || ||| ||||| ||||| |||||    
T  6771410 caacttgtatgtgggagaaaaagttgtgttgtgatttagtgagtgacaagaattt 6771464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 351 - 445
Target Start/End: Complemental strand, 17327704 - 17327610
Alignment:
Q  351 ctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||  ||| ||| |||| ||||||||||| ||||| || |||| | |||||||| | || ||| ||||| |||||| ||||||||||    
T  17327704 ctccagtttgtcctgtacctgaaacagttttacaaattaaacactggacaactagagttgttttgtcttgtccttcattttttagcaaatcaaac 17327610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 285 - 339
Target Start/End: Complemental strand, 25343343 - 25343289
Alignment:
Q  285 gacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||||| ||| |||||||||||||  |||||||| |||| ||||||||||    
T  25343343 gacaacttgtacgtgcgacaaaaagttgtactatggtttagtgaaggacaaaaat 25343289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 351 - 445
Target Start/End: Complemental strand, 49303409 - 49303315
Alignment:
Q  351 ctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||  | | ||| |||| ||||||||||||||||| || |||||| |||||||| | || ||| ||| | |||||| ||||||||||    
T  49303409 ctccagtttgtcttatacctgaaacagttttacaaatcaaacactggacaattagagttgttttgtcttgtactttattttttagcaaatcaaac 49303315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 419
Target Start/End: Complemental strand, 13994131 - 13994062
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcct 419  Q
    |||||| ||||| |||||| | |||| ||||||||||||||||| || |||| || ||||||||| ||||    
T  13994131 cctccaatttgtcatgtccatgaaacagttttacaaatcaaacactggacaactgaagttgttctgtcct 13994062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 329
Target Start/End: Complemental strand, 16643317 - 16643272
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgag 329  Q
    ||||||| ||||||||||||||||||||||||  || |||||||||    
T  16643317 agacaacctgtatgtgggacaaaaagttgtgtcgtgatttggtgag 16643272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 26733594 - 26733651
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattt 341  Q
    ||||||||||||  || | ||||||||||||||||||||| ||| ||||||| |||||    
T  26733594 agacaacttgtacatgaggcaaaaagttgtgttatggtttagtgggggacaagaattt 26733651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 454
Target Start/End: Original strand, 40610867 - 40610944
Alignment:
Q  377 gttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacactctaa 454  Q
    |||||||||||||||||||| | |||| || ||||  |||| | | ||||| ||||||| ||||||||||||| ||||    
T  40610867 gttttacaaatcaaacattgtaaaatttgaattgtcatatcatatacttcattttttaataaatcaaacacaccctaa 40610944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 570425 - 570484
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtg--ttatggtttggtgagggacaaaaattt 341  Q
    ||||||||| || | | ||||||||||||||  || ||||||||||||||||||||||||    
T  570425 agacaacttatacgcgagacaaaaagttgtgcattgtggtttggtgagggacaaaaattt 570484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 339
Target Start/End: Original strand, 10384413 - 10384461
Alignment:
Q  291 ttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||| |||||||||||||||||| | |||||| |||| ||||||||||    
T  10384413 ttgtacgtgggacaaaaagttgtgctgtggtttagtgaaggacaaaaat 10384461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 301 - 341
Target Start/End: Original strand, 39717436 - 39717476
Alignment:
Q  301 gacaaaaagttgtgttatggtttggtgagggacaaaaattt 341  Q
    ||||||||||||| | ||||||| |||||||||||||||||    
T  39717436 gacaaaaagttgtctcatggtttagtgagggacaaaaattt 39717476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 434
Target Start/End: Complemental strand, 41967905 - 41967821
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagttttta 434  Q
    |||| |||||||  ||| ||| |||| ||||||||||||||| | || |||| | |||||||||| |||||| ||||| ||||||    
T  41967905 cctctagtttgtcctgtacctgaaacagttttacaaatcaaatactggacaactagagttgttctgtcctgtccttcatttttta 41967821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 358 - 454
Target Start/End: Complemental strand, 44738090 - 44737994
Alignment:
Q  358 ttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacactctaa 454  Q
    |||| |||| ||| |||| ||||||||||| ||||| || |||||| |||||||||| || |||  |||| |||||| |||| ||||| ||| ||||    
T  44738090 ttgtcatgtacctgaaacagttttacaaattaaacactggacaattagagttgttctgtcttgtctttcattttttagcaaaacaaacgcaccctaa 44737994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 434
Target Start/End: Complemental strand, 51703192 - 51703136
Alignment:
Q  378 ttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagttttta 434  Q
    |||||||||||||||| || |||||| |||||||||| || ||| ||||| ||||||    
T  51703192 ttttacaaatcaaacactggacaattagagttgttctgtcttgtccttcatttttta 51703136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 4e-24; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 284 - 454
Target Start/End: Original strand, 18386559 - 18386741
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattta------------tcactttcctccagtttgttatgtccctc 371  Q
    |||||||||||| |||||||||||||||||| | |||||||||||||||||||||| |             || ||| |||||||||||| |||| |||     
T  18386559 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagttttgtcctgtcccttgcctccagtttgtcatgtacctg 18386658  T
Q  372 aaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacactctaa 454  Q
    |||| ||||||||||||||||| || |||| | || ||||||| |||||| ||||| |||||| |||||||||||||| ||||    
T  18386659 aaacagttttacaaatcaaacactggacaactagaattgttctgtcctgtccttcattttttagcaaatcaaacacaccctaa 18386741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 284 - 445
Target Start/End: Original strand, 21784905 - 21785079
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||              | || ||| |||||||||||| |||| |||    
T  21784905 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtctcttgcctccagtttgtcatgtgcct 21785004  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| | |||||||||| || ||| ||||| |||||| ||||||||||    
T  21785005 gaaacagttttacaaatcaaacactgaacaactagagttgttctgtcatgtccttcattttttagcaaatcaaac 21785079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 284 - 445
Target Start/End: Complemental strand, 26994286 - 26994112
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattta-------------tcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||| | |||||||||||||||||||||| |              || ||| |||||||||||| |||| |||    
T  26994286 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagattttgtcctgtcccttgcctccagtttgtcatgtacct 26994187  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| | |||||||||| |||||| ||||| |||||| ||||||||||    
T  26994186 gaaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaac 26994112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 341 - 454
Target Start/End: Original strand, 16963242 - 16963355
Alignment:
Q  341 tatcactttcctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaat 440  Q
    |||| ||| |||| ||||||| |||| ||| |||| ||||||||||||||||| || |||||| |||||||||| |||||| ||||| ||||||||||||    
T  16963242 tatcccttgcctctagtttgtcatgtacctgaaacagttttacaaatcaaacactggacaattagagttgttctgtcctgtccttcattttttaacaaat 16963341  T
Q  441 caaacacactctaa 454  Q
    ||||| ||| ||||    
T  16963342 caaacgcaccctaa 16963355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 284 - 454
Target Start/End: Complemental strand, 10932618 - 10932435
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattta-------------tcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||||| | |||||||||||||||||||| |              || ||| ||||||||||||  ||| |||    
T  10932618 agacaacttgtacgtgggacaaaaagttgtgttgtagtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacct 10932519  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacactctaa 454  Q
     |||| ||||||||||||||||| || |||| | |||||||||| |||||| ||||| |||||| |||||||||| ||| ||||    
T  10932518 gaaacagttttacaaatcaaacactgaacaactagagttgttctgtcctgtccttcattttttagcaaatcaaacgcaccctaa 10932435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 23349352 - 23349297
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23349352 agacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 23349297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 284 - 454
Target Start/End: Complemental strand, 36769630 - 36769447
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattta-------------tcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||| | |||||||||||||||||||||| |              || ||| |||| |||||||  ||| |||    
T  36769630 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacct 36769531  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacactctaa 454  Q
     |||| ||||||||||||||||| || |||| | |||||||||||| |||| ||||| |||||| |||||||||||||| ||||    
T  36769530 gaaacagttttacaaatcaaacactggacaactagagttgttctattctgtccttcattttttagcaaatcaaacacaccctaa 36769447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 284 - 419
Target Start/End: Complemental strand, 34295465 - 34295324
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaa------tttatcactttcctccagtttgttatgtccctcaaactg 377  Q
    |||||||||||| |||||||||||||||||| | ||||||| |||||||||||||      ||| |  ||| |||||||||||| |||| ||| |||| |    
T  34295465 agacaacttgtacgtgggacaaaaagttgtgctgtggtttgctgagggacaaaaatatcagtttttgtcttgcctccagtttgtcatgtacctgaaacag 34295366  T
Q  378 ttttacaaatcaaacattgcacaattggagttgttctatcct 419  Q
    |||||||||||||||| || | || |||||||||||| ||||    
T  34295365 ttttacaaatcaaacactggataactggagttgttctgtcct 34295324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 284 - 445
Target Start/End: Original strand, 47953224 - 47953398
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaa--------tttatca-----ctttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||| | |||||||||||||||||||||        ||| |||     ||| ||||||||||||  ||| |||    
T  47953224 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtacct 47953323  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| | |||||||||| ||||||  |||| |||||| ||||||||||    
T  47953324 gaaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtcgttcattttttagcaaatcaaac 47953398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 284 - 445
Target Start/End: Original strand, 46633731 - 46633900
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaa--------tttatcactttcctccagtttgttatgtccctcaaac 375  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||| |||||        ||| ||   ||||||||||||||  |||  || ||||    
T  46633731 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggataaaaatatgagtttttgtcttgttcctccagtttgtcctgtatctgaaac 46633830  T
Q  376 tgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     ||||||||||||||||| || |||| | |||||||||| || ||| ||||| |||||| ||||||||||    
T  46633831 agttttacaaatcaaacactggacaactagagttgttctgtcatgtccttcattttttagcaaatcaaac 46633900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 350 - 454
Target Start/End: Original strand, 48445634 - 48445738
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacac 449  Q
    ||||||||||||| |||||||||||| ||||||||||| |||||||| | || |||||||||||| || | | ||||| |||||||||||| |||| |||    
T  48445634 cctccagtttgttctgtccctcaaacagttttacaaattaaacattggataactggagttgttctgtcttttccttcattttttaacaaattaaacgcac 48445733  T
Q  450 tctaa 454  Q
     ||||    
T  48445734 cctaa 48445738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 1870169 - 1870224
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  1870169 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 1870224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 284 - 445
Target Start/End: Complemental strand, 11321946 - 11321772
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattta-------------tcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||| | |||||||||||||||||||||| |              ||  || ||||||||||||  ||| |||    
T  11321946 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtccgttgcctccagtttgtcctgtacct 11321847  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     || | |||||||||||||||||||| |||| | |||||||||| || ||||||||| |||||| ||||||||||    
T  11321846 gaatcagttttacaaatcaaacattggacaactagagttgttctgtcatgttcttcattttttagcaaatcaaac 11321772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 284 - 445
Target Start/End: Complemental strand, 43158747 - 43158573
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||              | || ||| ||||||||||||  ||| |||    
T  43158747 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggtaagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacct 43158648  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| | |||||||||| || ||| ||||| |||||| ||||||||||    
T  43158647 gaaacagttttacaaatcaaacactggacaactagagttgttctgtcttgtccttcattttttagcaaatcaaac 43158573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 285 - 339
Target Start/End: Complemental strand, 43213985 - 43213931
Alignment:
Q  285 gacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  43213985 gacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgaaggacaaaaat 43213931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 284 - 445
Target Start/End: Original strand, 44748729 - 44748903
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaatt-------------tatcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| ||||||||||||||||| || |||||||||||||||||||||||             | || ||| |||| ||||||| |||| |||    
T  44748729 agacaacttgtacgtgggacaaaaagttgtattgtggtttggtgagggacaaaaatttgagtttttgttctgtcccttgcctctagtttgtcatgtacct 44748828  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| | |||||||| | |||||| ||| | |||||| ||||||||||    
T  44748829 gaaacagttttacaaatcaaacactggacaactagagttgttttgtcctgtcctttattttttagcaaatcaaac 44748903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 286 - 339
Target Start/End: Complemental strand, 30849305 - 30849252
Alignment:
Q  286 acaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  30849305 acaacttgtatatgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 30849252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 38301455 - 38301551
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttca-gtttttaacaaatcaaac 445  Q
    ||||||||||||  ||| ||| |||| ||||||||||||||||| || ||||||||||||||||| |||||| |||||  |||||| ||||||||||    
T  38301455 cctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaattggagttgttctgtcctgtccttcatttttttagcaaatcaaac 38301551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 454
Target Start/End: Original strand, 34519542 - 34519725
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaatt-------------tatcactttcctccagtttgttatgtccct 370  Q
    ||||||||||||  ||||||||||||||||||| |||||||| ||||||||||||||             | || ||| ||||||| |||| ||||||||    
T  34519542 agacaacttgtacctgggacaaaaagttgtgttgtggtttggcgagggacaaaaattgcagtttttgtcctgtcccttgcctccagcttgtcatgtccct 34519641  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacactctaa 454  Q
     |||||||||||||| || |||| || |||| || ||||||||| |||||| ||| | ||||||  ||||||||| ||| ||||    
T  34519642 gaaactgttttacaattcgaacactggacaactgaagttgttctgtcctgtcctttattttttattaaatcaaacgcaccctaa 34519725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 41211261 - 41211206
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  41211261 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 41211206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 43189303 - 43189248
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||    
T  43189303 agacaacttgtacgtgggataaaaagttgtgttgtggtttggtgagggacaaaaat 43189248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 43368314 - 43368409
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||  | | ||| |||| ||||||||||||||||| || |||| |||||||||||| |||||| ||||| |||||| ||||||||||    
T  43368314 cctccagtttgtcctatacctgaaacagttttacaaatcaaacactggacaactggagttgttctgtcctgtccttcattttttagcaaatcaaac 43368409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 46408923 - 46408978
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||    
T  46408923 agacaacttgtatgtcggacaaaaagttgtgctgtggtttggtgagggacaaaaat 46408978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 47316759 - 47316704
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||    
T  47316759 agacaacttgcatgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaat 47316704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 329507 - 329561
Alignment:
Q  287 caacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattt 341  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||||||||||||    
T  329507 caacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaattt 329561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 445
Target Start/End: Complemental strand, 26910470 - 26910298
Alignment:
Q  285 gacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaatt-------------tatcactttcctccagtttgttatgtccctc 371  Q
    ||||||||||| ||| |||||||||||||||| |||||||| ||||||||||||||             | || ||| |||||||||||   |||||||     
T  26910470 gacaacttgtacgtgtgacaaaaagttgtgttgtggtttggcgagggacaaaaattgcagtttttatcctgtcccttgcctccagtttgccctgtccctg 26910371  T
Q  372 aaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||||||||||||| || |||| || ||||||||| || ||| ||||| ||| || ||||||||||    
T  26910370 aaactgttttacaaatcaaacactggacaactgtagttgttctgtcatgtccttca-tttatatcaaatcaaac 26910298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 445
Target Start/End: Original strand, 48894832 - 48894925
Alignment:
Q  352 tccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||  ||| ||| ||||  |||||||||||||||| || |||| |||||||||||| |||||| ||||| |||||| ||||||||||    
T  48894832 tccagtttgtactgtacctgaaacaattttacaaatcaaacactggacaactggagttgttctgtcctgtccttcattttttagcaaatcaaac 48894925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 284 - 419
Target Start/End: Complemental strand, 22724592 - 22724444
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaatt-------------tatcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||| ||||||| | | |||||||||||||||||||||||             |||| ||| ||||||||||||  |||||||    
T  22724592 agacaacttgtacgtgggacataaagttgcgctgtggtttggtgagggacaaaaattgcagcttttgtcatatcccttgcctccagtttgtcctgtccct 22724493  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcct 419  Q
     |||||||||||||||||||||  || |||| |||| ||||||| ||||    
T  22724492 gaaactgttttacaaatcaaacgctgaacaactggaattgttctgtcct 22724444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 18470718 - 18470888
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat--------ttatca---ctttcctccagtttgttatgtccctca 372  Q
    |||||||||||| ||||||||||||||| || | |||||||||||| |||||||||        || ||    ||| ||||||||||||  ||| ||| |    
T  18470718 agacaacttgtacgtgggacaaaaagttatgctgtggtttggtgagagacaaaaatatgagtttttgtcctgtcttgcctccagtttgtcctgtacctga 18470817  T
Q  373 aactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaa 443  Q
    ||| ||||||||||||||||| |  |||| | ||||||||||||||||| ||||| ||| || ||||||||    
T  18470818 aacagttttacaaatcaaacactcgacaactagagttgttctatcctgtccttcattttgtagcaaatcaa 18470888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 26371870 - 26371815
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | || |||||||||||||||||||    
T  26371870 agacaacttgtacgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaat 26371815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 26652900 - 26652955
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||| ||||||||||||||    
T  26652900 agacaacttgtacgtgggacaaaaagttgtgctgtggtttgctgagggacaaaaat 26652955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 32873830 - 32873775
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||| ||||||||||    
T  32873830 agacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgaaggacaaaaat 32873775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 40753189 - 40753244
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | || |||||||||||||||||||    
T  40753189 agacaacttgtacgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaat 40753244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 288 - 445
Target Start/End: Complemental strand, 3922760 - 3922590
Alignment:
Q  288 aacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccctcaaa 374  Q
    |||||||| |||||||||||||||||| | ||||||||||||| ||||||||             || || ||| ||||||||||||  ||| ||| |||    
T  3922760 aacttgtacgtgggacaaaaagttgtgctgtggtttggtgaggaacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcctgtacctgaaa 3922661  T
Q  375 ctgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    | ||||||||||| ||||| || |||| | |||||||||| || ||| ||||| |||||| ||||||||||    
T  3922660 cagttttacaaataaaacactggacaactagagttgttctgtcatgtccttcattttttagcaaatcaaac 3922590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 449
Target Start/End: Complemental strand, 3891994 - 3891925
Alignment:
Q  380 ttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacac 449  Q
    ||||||||||||||||| |||| | |||||||||| |||||| ||||| |||||| ||||||||| ||||    
T  3891994 ttacaaatcaaacattggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaatacac 3891925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 298 - 339
Target Start/End: Original strand, 11250665 - 11250706
Alignment:
Q  298 tgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  11250665 tgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 11250706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 43213885 - 43213812
Alignment:
Q  372 aaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||| ||||||||||||||||| |  |||| || ||||||||| |||||||||||| |||||| ||||||||||    
T  43213885 aaacagttttacaaatcaaacactagacaactgaagttgttctgtcctgttcttcattttttagcaaatcaaac 43213812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 445
Target Start/End: Complemental strand, 22723999 - 22723919
Alignment:
Q  365 gtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||| |||||||||||||||||||||| || |||| |||||||||||| ||   | ||||| |||||| ||||||||||    
T  22723999 gtccctgaaactgttttacaaatcaaacactggacaactggagttgttctgtcacatccttcattttttatcaaatcaaac 22723919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 445
Target Start/End: Complemental strand, 30849225 - 30849133
Alignment:
Q  353 ccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||  ||| ||| |||| |||||||||||||| ||||| |||| | || ||||||| || ||| ||||| |||||||||||||||||    
T  30849225 ccagtttgtcctgtacctaaaacagttttacaaatcaatcattggacaactagaattgttctgtcttgtccttcattttttaacaaatcaaac 30849133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 340
Target Start/End: Complemental strand, 41665636 - 41665580
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaatt 340  Q
    |||||||||||| ||| |||||||||||||| | |||||||| ||||||||||||||    
T  41665636 agacaacttgtacgtgagacaaaaagttgtgatgtggtttggcgagggacaaaaatt 41665580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 377 - 444
Target Start/End: Original strand, 9913664 - 9913731
Alignment:
Q  377 gttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaa 444  Q
    |||||||||||||||||  | |||| |||||||||||| |||||| ||||| |||||| |||||||||    
T  9913664 gttttacaaatcaaacaccggacaactggagttgttctgtcctgtccttcattttttagcaaatcaaa 9913731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 377 - 444
Target Start/End: Original strand, 9927352 - 9927419
Alignment:
Q  377 gttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaa 444  Q
    |||||||||||||||||  | |||| |||||||||||| |||||| ||||| |||||| |||||||||    
T  9927352 gttttacaaatcaaacaccggacaactggagttgttctgtcctgtccttcattttttagcaaatcaaa 9927419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 445
Target Start/End: Original strand, 17237217 - 17237284
Alignment:
Q  378 ttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||||||| || |||| |||||||||||| || ||| ||||| |||||| ||||||||||    
T  17237217 ttttacaaatcaaacactggacaactggagttgttctgtcatgtccttcattttttagcaaatcaaac 17237284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 26700590 - 26700685
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||| |||| ||| |||| ||| ||||||||||||| || |||| |||| ||||| | || ||| ||||| |||||| ||||||||||    
T  26700590 cctccagtttgtcatgtacctgaaacagttatacaaatcaaacactggacaactggaattgttatgtcatgtccttcattttttaccaaatcaaac 26700685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 288 - 339
Target Start/End: Original strand, 29661361 - 29661412
Alignment:
Q  288 aacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||| |||||| ||||||||||| | ||||||||||||||||||||||    
T  29661361 aacttgtacgtgggataaaaagttgtgctgtggtttggtgagggacaaaaat 29661412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 38301377 - 38301431
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||  |||||||||||||||||||| ||||||| ||||||||||||||    
T  38301377 agacaacttgtc-gtgggacaaaaagttgtgttgtggtttgctgagggacaaaaat 38301431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 41211182 - 41211087
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||| |||||||  ||| ||| |||| ||||||||||||||||| ||  ||| | |||||||||| |||||| ||||| |||||| ||||||||||    
T  41211182 cctctagtttgtcttgtacctgaaacagttttacaaatcaaacactgggcaacttgagttgttctgtcctgtccttcattttttagcaaatcaaac 41211087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 329583 - 329684
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaa------ttggagttgttctatcctgttcttcagtttttaacaaatcaa 443  Q
    ||||||||||||| ||||||| |||| |||||||||||||||||  | ||||      ||||||||||| | || ||| ||||| |||||||||||||||    
T  329583 cctccagtttgttctgtccctgaaacagttttacaaatcaaacacgggacaactggagttggagttgttttgtcttgtccttcattttttaacaaatcaa 329682  T
Q  444 ac 445  Q
    ||    
T  329683 ac 329684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 15035314 - 15035257
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattt 341  Q
    |||||| |||||||||| ||||||||||||||| |||| |||||||| |||| |||||    
T  15035314 agacaatttgtatgtggtacaaaaagttgtgttgtggtctggtgaggaacaagaattt 15035257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 286 - 339
Target Start/End: Original strand, 16963174 - 16963227
Alignment:
Q  286 acaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||| ||||||||||||||||| || ||||||| | ||||||||||||    
T  16963174 acaacttgtacgtgggacaaaaagttgtattgtggtttgataagggacaaaaat 16963227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 48699432 - 48699489
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattt 341  Q
    |||||||||||| |||| ||||| ||||||||| |||||| ||||||||||| |||||    
T  48699432 agacaacttgtacgtggaacaaatagttgtgttgtggtttagtgagggacaagaattt 48699489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 454
Target Start/End: Original strand, 11250726 - 11250834
Alignment:
Q  346 ctttcctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||| ||||||||||||  ||| ||| ||||  |||||||||| ||||| || |||| | |||||||||| || ||| ||||| |||||| ||||||||||    
T  11250726 cttgcctccagtttgtcctgtacctgaaacaattttacaaatgaaacactggacaactagagttgttctgtcatgtccttcattttttagcaaatcaaac 11250825  T
Q  446 acactctaa 454  Q
     ||| ||||    
T  11250826 gcaccctaa 11250834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 3892087 - 3892032
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| || ||||||||||||||| | || ||||||||| |||||||||    
T  3892087 agacaacttgtacgtaggacaaaaagttgtgctgtgatttggtgagagacaaaaat 3892032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 26371791 - 26371696
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||  ||| ||| |||  ||||| ||||||||||| || |||| | |||||||||| |||| | ||||| |||||| ||||||||||    
T  26371791 cctccagtttgtcctgtacctgaaatagttttgcaaatcaaacactggacaactagagttgttctgtcctatccttcattttttagcaaatcaaac 26371696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 29661436 - 29661530
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||| |||| ||| || | ||| ||||||||||||| || |||| | |||||||||||| || | ||||| |||||| ||||||||||    
T  29661436 cctccagtttgtcatgtacctgaatcagttctacaaatcaaacactggacaactagagttgttctat-ctatccttcattttttagcaaatcaaac 29661530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 34117486 - 34117541
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||||||  ||| ||||||| ||||| | ||||||||||||||||||||||    
T  34117486 agacaacttgtacatggaacaaaaaattgtgatgtggtttggtgagggacaaaaat 34117541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 445
Target Start/End: Original strand, 40753264 - 40753363
Alignment:
Q  346 ctttcctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||| ||||||||||||  ||| ||| |||| |||||||||||||||||||| ||||   |||||||||| || ||| | | | |||||| ||||||||||    
T  40753264 cttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacattggacaacgagagttgttctgtcatgtcccttattttttagcaaatcaaac 40753363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 43368235 - 43368290
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| || ||||||||||||||| | ||||||| ||||| ||||||||    
T  43368235 agacaacttgtacgtaggacaaaaagttgtgctgtggtttgctgaggcacaaaaat 43368290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 285 - 339
Target Start/End: Original strand, 1363671 - 1363725
Alignment:
Q  285 gacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||| |||| ||| |||||||||||||| | ||||||| ||||||||||||||    
T  1363671 gacaacctgtacgtgagacaaaaagttgtgatgtggtttgatgagggacaaaaat 1363725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 346 - 444
Target Start/End: Original strand, 1870244 - 1870342
Alignment:
Q  346 ctttcctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaa 444  Q
    ||| |||||||||| |  ||| ||| |||| ||||||||||||||||| || |||| | ||||||||||   |||| ||||| |||||| |||||||||    
T  1870244 cttgcctccagtttatcttgtacctgaaacagttttacaaatcaaacactgaacaactagagttgttctgcactgtccttcattttttagcaaatcaaa 1870342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 339
Target Start/End: Original strand, 11822270 - 11822312
Alignment:
Q  297 gtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||||||||||| |||||| |||| ||||||||||    
T  11822270 gtgggacaaaaagttgtgttgtggtttagtgaaggacaaaaat 11822312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 30599052 - 30599014
Alignment:
Q  301 gacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  30599052 gacaaaaagttgtgttgtggtttgatgagggacaaaaat 30599014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 337
Target Start/End: Original strand, 9913559 - 9913612
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaa 337  Q
    ||||||| |||| |||||| ||||||||||| | |||||||||||| |||||||    
T  9913559 agacaacctgtacgtgggaaaaaaagttgtgatgtggtttggtgagcgacaaaa 9913612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 337
Target Start/End: Original strand, 9927247 - 9927300
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaa 337  Q
    ||||||| |||| |||||| ||||||||||| | |||||||||||| |||||||    
T  9927247 agacaacctgtacgtgggaaaaaaagttgtgatgtggtttggtgagcgacaaaa 9927300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 339
Target Start/End: Original strand, 20127325 - 20127378
Alignment:
Q  286 acaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||| ||||| |||||||||||||||||| | ||||||| ||||| ||||||||    
T  20127325 acaaattgtacgtgggacaaaaagttgtgatgtggtttgctgaggaacaaaaat 20127378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 29372840 - 29372783
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattt 341  Q
    ||||||||||||  ||| ||| ||||||||||| |||||| |||| ||||||||||||    
T  29372840 agacaacttgtacatggaacagaaagttgtgttgtggtttagtgacggacaaaaattt 29372783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 48445555 - 48445612
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattt 341  Q
    |||||||||||||| | |||||||||||||  | || |||||||| ||||||||||||    
T  48445555 agacaacttgtatgcgagacaaaaagttgtcctgtgatttggtgaaggacaaaaattt 48445612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 328
Target Start/End: Original strand, 42332093 - 42332137
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtga 328  Q
    |||||| ||||||||| |||||||||||||| | |||||||||||    
T  42332093 agacaatttgtatgtgagacaaaaagttgtgatgtggtttggtga 42332137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 4e-24; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 284 - 454
Target Start/End: Complemental strand, 27839139 - 27838957
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaatttat------------cactttcctccagtttgttatgtccctc 371  Q
    ||||||||||||  || ||||||||||||| |||||||||||||||||||||||||||||            |  || ||| |||||||| |||| |||     
T  27839139 agacaacttgtacatgagacaaaaagttgttttatggtttggtgagggacaaaaatttatgttttatcctgtccattgccttcagtttgtcatgtacctg 27839040  T
Q  372 aaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacactctaa 454  Q
    |||| ||||||||||||||||| || |||| |||||||||||| || ||| ||||| ||||||||||||||||| ||| ||||    
T  27839039 aaacagttttacaaatcaaacactggacaactggagttgttctgtcatgtccttcattttttaacaaatcaaacgcaccctaa 27838957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 284 - 445
Target Start/End: Original strand, 11963371 - 11963545
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat--------ttatca-----ctttcctccagtttgttatgtccct 370  Q
    |||||||||| | |||||||||||||||||| | ||||||||||||||||||||||        || |||     ||| ||||||||||||  ||| |||    
T  11963371 agacaacttgcacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtacct 11963470  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| | |||||||||| |||||| ||||| |||||| ||||||||||    
T  11963471 gaaacagttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaac 11963545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 284 - 444
Target Start/End: Complemental strand, 18470494 - 18470321
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattta-------------tcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||| ||||||||||| | ||||||||| ||||||||||||||              || ||| ||| ||||||||| |||||||    
T  18470494 agacaacttgtacgtgggataaaaagttgtgctgtggtttggtaagggacaaaaatttcagtttttgtcttgtcccttgccttcagtttgttctgtccct 18470395  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaa 444  Q
     |||| ||||||||||||||||| || | || |||||||||||| || ||| ||||| ||||||||||||||||    
T  18470394 gaaacagttttacaaatcaaacactggataactggagttgttctgtcttgtccttcattttttaacaaatcaaa 18470321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 454
Target Start/End: Original strand, 2351710 - 2351893
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||              | |||||| ||||||||||||  | | |||    
T  2351710 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcacttgcctccagtttgtcctatacct 2351809  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacactctaa 454  Q
     |||| ||||||||||||||||| || |||| | ||||||| || |||||| ||||| |||||| |||||||||| ||| ||||    
T  2351810 taaacagttttacaaatcaaacactgaacaactagagttgtcctgtcctgtccttcattttttagcaaatcaaacgcaccctaa 2351893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 3735466 - 3735561
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||| ||||| |||| ||| |||| ||||||||||||||||| || |||| |||||||||||| || ||||||||| |||||| ||||||||||    
T  3735466 cctccattttgtcatgtacctgaaacggttttacaaatcaaacactggacaactggagttgttctgtcatgttcttcattttttagcaaatcaaac 3735561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 445
Target Start/End: Complemental strand, 4689761 - 4689590
Alignment:
Q  287 caacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccctcaa 373  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||              | || ||| ||||||||||||  ||| ||| ||    
T  4689761 caacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgtgtttttgtcctgtcccttgcctccagtttgtcttgtacctgaa 4689662  T
Q  374 actgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    || ||||||||||||||||| || |||| || ||||||||| || ||| ||||| |||||| ||||||||||    
T  4689661 acagttttacaaatcaaacactggacaactgaagttgttctgtcatgtccttcattttttagcaaatcaaac 4689590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 32528745 - 32528800
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  32528745 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 32528800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 37148576 - 37148481
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||| ||||||| |||| ||||||||||||||||| |  |||| |||||||||||| || | | ||||| |||||||||||||||||    
T  37148576 cctccagtttgttctgtccctgaaacagttttacaaatcaaacaattgacaactggagttgttctgtcatatccttcattttttaacaaatcaaac 37148481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 285 - 338
Target Start/End: Complemental strand, 6284363 - 6284310
Alignment:
Q  285 gacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaa 338  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  6284363 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaa 6284310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 284 - 448
Target Start/End: Original strand, 7523202 - 7523379
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||              | || ||| ||||||||||||  ||| |||    
T  7523202 agacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacct 7523301  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacaca 448  Q
     |||| ||||||||||||||||| || |||| | || ||||||| |||| | ||||| |||||| |||||||||||||    
T  7523302 gaaacagttttacaaatcaaacactggacaactagaattgttctgtcctatccttcattttttagcaaatcaaacaca 7523379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 284 - 454
Target Start/End: Original strand, 31644476 - 31644659
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat----ttat--------cactttcctccagtttgttatgtccctc 371  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||     |||        | ||| ||||||||||||  ||| |||     
T  31644476 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtatttgtcttgctcttgcctccagtttgtcctgtacctg 31644575  T
Q  372 aaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaa-caaatcaaacacactctaa 454  Q
    |||| ||||||||||||||||| || |||| | |||||||||| ||| || ||||| ||||||| |||||||||| ||| ||||    
T  31644576 aaacagttttacaaatcaaacactggacaactagagttgttctgtcccgtccttcattttttaagcaaatcaaacgcaccctaa 31644659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 451
Target Start/End: Original strand, 553427 - 553607
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||||| |||||||||||| |||||||||             || || ||| ||||||||||||  ||| | |    
T  553427 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagagacaaaaatatgagtttttgtcttgtctcttgcctccagtttgtcctgtactt 553526  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacactc 451  Q
     |||| |||||| |||||||||| |  ||||||  ||||||||| || | ||||||| |||||| ||||||||||||||||    
T  553527 gaaacagttttataaatcaaacactagacaattaaagttgttctgtcatattcttcattttttagcaaatcaaacacactc 553607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 4818206 - 4818151
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  4818206 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 4818151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 5571710 - 5571655
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| || ||||||||||||||||| ||||||||||||||||||||||    
T  5571710 agacaacttgtacgttggacaaaaagttgtgttgtggtttggtgagggacaaaaat 5571655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 350 - 453
Target Start/End: Original strand, 5598589 - 5598692
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacac 449  Q
    ||||||||||||   || ||| |||| |||||||||||||||||||| |||| | |||||||||| | |||| ||||| |||||| |||||||||| |||    
T  5598589 cctccagtttgtctcgtacctgaaacagttttacaaatcaaacattggacaacttgagttgttctgttctgtgcttcattttttagcaaatcaaacgcac 5598688  T
Q  450 tcta 453  Q
    ||||    
T  5598689 tcta 5598692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 8136867 - 8136922
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| || ||||||||||||||||| ||||||||||||||||||||||    
T  8136867 agacaacttgtacgtaggacaaaaagttgtgttgtggtttggtgagggacaaaaat 8136922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 21739227 - 21739172
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  21739227 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 21739172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 28090586 - 28090531
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||||| | ||||||||||||||||||||    
T  28090586 agacaacttgtacgtgggacaaaaagttgtgttgtagtttggtgagggacaaaaat 28090531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 31770657 - 31770602
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||    
T  31770657 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggataaaaat 31770602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 454
Target Start/End: Original strand, 34794917 - 34795100
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattta-------------tcactttcctccagtttgttatgtccct 370  Q
    ||||||||| || |||||||||||||||||| | |||||||||||||||||||||| |              || ||| |||| |||||||  ||| |||    
T  34794917 agacaacttatacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacct 34795016  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacactctaa 454  Q
     |||| ||||||||||||||| |||| |||| | |||||||||| || ||| ||||| ||||||||||||||||| ||| ||||    
T  34795017 gaaacagttttacaaatcaaatattggacaactagagttgttctgtcatgtccttcattttttaacaaatcaaacgcaccctaa 34795100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 39788223 - 39788278
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  39788223 agacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 39788278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 40489367 - 40489422
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||||||||||||||||||||||||| | || |||||||||||||||||||    
T  40489367 agacaacttgtatgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaat 40489422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 284 - 445
Target Start/End: Original strand, 35701307 - 35701481
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||| |||||||||| |||| ||||||||||||||||||||||              | || ||| ||||||||||||  ||| ||     
T  35701307 agacaacttgtacgtggaacaaaaagttatgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacca 35701406  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| | ||||||||||||| ||| ||||| |||||| ||||||||||    
T  35701407 gaaacagttttacaaatcaaacactggacaactagagttgttctatcttgtccttcattttttagcaaatcaaac 35701481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 454
Target Start/End: Original strand, 41459619 - 41459801
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat------------ttatcactttcctccagtttgttatgtccctc 371  Q
    |||||||||||| |||| ||||||||||||| | ||||||||||||||||||||||            || || ||| ||||||||||||  ||| |||     
T  41459619 agacaacttgtacgtggaacaaaaagttgtgctctggtttggtgagggacaaaaatatgagttttttcttgtcccttgcctccagtttgtcctgtacctg 41459718  T
Q  372 aaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacactctaa 454  Q
    |||| ||||||||||||||| | |  |||| | |||||||||| || ||| ||||| |||||| |||||||||| ||| ||||    
T  41459719 aaacagttttacaaatcaaatactaaacaactagagttgttctgtcatgtccttcattttttagcaaatcaaacgcaccctaa 41459801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 3735387 - 3735442
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||||||| ||||||||||    
T  3735387 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgatggacaaaaat 3735442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 4664940 - 4665035
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||| ||||||  ||||||| |||||||||||||||||||||| || | || |||||||||||| || ||| ||||| |||| | ||||||||||    
T  4664940 cctcctgtttgtcctgtccctgaaactgttttacaaatcaaacactggataactggagttgttctgtcatgtccttcatttttaatcaaatcaaac 4665035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 7208296 - 7208241
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||| |||||||||||||| | ||||||||||||||||||||||    
T  7208296 agacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaat 7208241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 445
Target Start/End: Complemental strand, 7770342 - 7770171
Alignment:
Q  287 caacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccctcaa 373  Q
    ||||||||| |||||||||||||||||| | ||||||||||| ||||||||||              | || ||| ||||||||||||  ||| ||| ||    
T  7770342 caacttgtacgtgggacaaaaagttgtgctgtggtttggtgaaggacaaaaatatgtgtttttgtcctgtcccttgcctccagtttgtcctgtacctgaa 7770243  T
Q  374 actgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||  |||||||||||||||| || |||| | ||||||||||||| ||| ||||| |||||| ||||||||||    
T  7770242 acaattttacaaatcaaacactggacaactagagttgttctatcatgtccttcattttttagcaaatcaaac 7770171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 22493485 - 22493430
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||| |||||||||||||| | ||||||||||||||||||||||    
T  22493485 agacaacttgtacgtgtgacaaaaagttgtgctgtggtttggtgagggacaaaaat 22493430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 24036260 - 24036315
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||| ||||||||||| | ||||||||||||||||||||||    
T  24036260 agacaacttgtacgtgggataaaaagttgtgatgtggtttggtgagggacaaaaat 24036315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 39918537 - 39918592
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||| |||||||||||||| | ||||||||||||||||||||||    
T  39918537 agacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaat 39918592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 40182494 - 40182549
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||||||  ||||||||||||||||| | ||||||||||||||||||||||    
T  40182494 agacaacttgtacatgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 40182549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 41790528 - 41790473
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||| ||||| ||| |||||||||||||||| ||||||||||||||||||||||    
T  41790528 agacaatttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaat 41790473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 297 - 339
Target Start/End: Original strand, 5673182 - 5673224
Alignment:
Q  297 gtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  5673182 gtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 5673224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 284 - 445
Target Start/End: Complemental strand, 31880142 - 31879968
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| || ||||||| ||||||| | ||||||||||||||||||||||              | |||||| ||||||||||||  ||| |||    
T  31880142 agacaacttgtacgtaggacaaatagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcacttgcctccagtttgtcctgtacct 31880043  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||| ||||||||| || |||| | |||||||| |||| ||| ||||| |||||| ||||||||||    
T  31880042 gaaacagttttactaatcaaacactgaacaactagagttgttatatcttgtccttcattttttagcaaatcaaac 31879968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 29241411 - 29241463
Alignment:
Q  287 caacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||| |||||||||||||||||| | |||||||| |||||||||||||    
T  29241411 caacttgtacgtgggacaaaaagttgtgctgtggtttggcgagggacaaaaat 29241463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 446
Target Start/End: Complemental strand, 32092941 - 32092873
Alignment:
Q  378 ttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaaca 446  Q
    |||||||||||||||| ||||||| |||||||||||| || ||| ||||| ||||||  ||||||||||    
T  32092941 ttttacaaatcaaacactgcacaactggagttgttctgtcttgtccttcattttttataaaatcaaaca 32092873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 351 - 451
Target Start/End: Original strand, 32528825 - 32528925
Alignment:
Q  351 ctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacact 450  Q
    |||||||||||  ||| ||| |||| ||||||||||||||||| || |||| | ||||||| || || ||| ||||| |||||| |||||||||| ||||    
T  32528825 ctccagtttgtcctgtacctgaaacagttttacaaatcaaacactgaacaactagagttgtcctgtcatgtccttcattttttagcaaatcaaacgcact 32528924  T
Q  451 c 451  Q
    |    
T  32528925 c 32528925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 288 - 339
Target Start/End: Complemental strand, 700663 - 700612
Alignment:
Q  288 aacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||| ||| |||||||||||||||| ||||||||||||| ||||||||    
T  700663 aacttgtacgtgagacaaaaagttgtgttgtggtttggtgaggaacaaaaat 700612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 24181690 - 24181635
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||| || ||||||||||||||| || | ||||||||||||||||||||||    
T  24181690 agacaacttatacgtgggacaaaaagttatgctgtggtttggtgagggacaaaaat 24181635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 29241487 - 29241582
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||| ||||| |||| ||| |||| ||||||||||||||||| || |||| | ||||||||||  ||||  ||||| |||||| ||||||||||    
T  29241487 cctccaatttgtcatgtacctgaaacagttttacaaatcaaacactggacaactagagttgttctggcctggccttcattttttagcaaatcaaac 29241582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 453
Target Start/End: Original strand, 39788302 - 39788405
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacac 449  Q
    ||| ||||||||  ||| ||| |||| ||||||||||||||| | || |||| | || ||||||| |||||| ||| | ||||||||||||||||| |||    
T  39788302 cctacagtttgtcctgtacctgaaacagttttacaaatcaaatactggacaactagaattgttctgtcctgtcctttattttttaacaaatcaaacgcac 39788401  T
Q  450 tcta 453  Q
    ||||    
T  39788402 tcta 39788405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 445
Target Start/End: Complemental strand, 24181610 - 24181516
Alignment:
Q  351 ctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||  ||| ||| |||| ||||||||||||||||| || |||| | |||||||| | || ||| ||||| |||||| ||||||||||    
T  24181610 ctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgttttgtcatgtccttcattttttagcaaatcaaac 24181516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 7725875 - 7725820
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||| || |||||||||||||||||||| ||||||  ||| ||||||||||    
T  7725875 agacaacttatacgtgggacaaaaagttgtgttgtggtttaatgaaggacaaaaat 7725820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 445
Target Start/End: Original strand, 8136942 - 8137041
Alignment:
Q  346 ctttcctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||| ||||||||||||  |||  || |||| |||||||||| |||||| || |||| | |||||||||| |||| | ||||| |||||| ||||||||||    
T  8136942 cttgcctccagtttgtcctgtatctgaaacagttttacaaaacaaacactggacaactagagttgttctgtcctatccttcattttttagcaaatcaaac 8137041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 8561048 - 8560993
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||||||  ||| ||||||||||||| | ||||||||||||| ||||||||    
T  8561048 agacaacttgtacctggaacaaaaagttgtgatgtggtttggtgaggaacaaaaat 8560993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 22432375 - 22432320
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||||||  || |||||||| ||||||| ||||||| ||||||||||||||    
T  22432375 agacaacttgtacttgagacaaaaaattgtgttgtggtttgatgagggacaaaaat 22432320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 445
Target Start/End: Original strand, 39918612 - 39918711
Alignment:
Q  346 ctttcctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||| ||||||||||||  |||  || |||| ||||||||||||||||| || |||| | |||||||  | |||||| ||||| |||||| ||||||||||    
T  39918612 cttgcctccagtttgtcttgtatctgaaacagttttacaaatcaaacactggacaactagagttgtcttgtcctgtccttcattttttagcaaatcaaac 39918711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 445
Target Start/End: Original strand, 40489442 - 40489540
Alignment:
Q  346 ctttcctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||| ||||||||||||  | | ||| |||| ||||||||||||||||| || |||||| ||||| |||| |||||| ||| | |||||| ||||||||||    
T  40489442 cttgcctccagtttgtcttctacctgaaacagttttacaaatcaaacactgaacaattagagttattctgtcctgtcctt-attttttagcaaatcaaac 40489540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 350 - 436
Target Start/End: Original strand, 17031266 - 17031352
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaac 436  Q
    |||||| |||||  ||||||| |||| |||||||||||||||||||  |||| |||||||||  | || ||| ||||| ||||||||    
T  17031266 cctccaatttgtactgtccctgaaacagttttacaaatcaaacattatacaagtggagttgtgttgtcttgtccttcattttttaac 17031352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 291 - 341
Target Start/End: Complemental strand, 32093040 - 32092991
Alignment:
Q  291 ttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattt 341  Q
    ||||| |||||||||||||||||| | ||||||||||| ||||||||||||    
T  32093040 ttgtacgtgggacaaaaagttgtgctgtggtttggtga-ggacaaaaattt 32092991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 451
Target Start/End: Complemental strand, 23091291 - 23091190
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacac 449  Q
    |||||||||| |  ||| ||| |||| ||||||||||||||||| || |||| | |||| ||| |||| |||  |||| |||||| |||||||||| |||    
T  23091291 cctccagtttatcctgtacctgaaacagttttacaaatcaaacactggacaacttgagtagttatatcttgtcattcattttttagcaaatcaaacgcac 23091192  T
Q  450 tc 451  Q
    ||    
T  23091191 tc 23091190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 453
Target Start/End: Complemental strand, 6284285 - 6284184
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacac 449  Q
    ||||||||||||  ||| ||| || | ||||||||||||||||| || |||| |  |||| ||||  || || ||||| ||||||||||||||||| |||    
T  6284285 cctccagtttgtcctgtacctgaagcagttttacaaatcaaacactggacaactaaagttattct--cccgtccttcattttttaacaaatcaaacgcac 6284188  T
Q  450 tcta 453  Q
    ||||    
T  6284187 tcta 6284184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 372 - 444
Target Start/End: Complemental strand, 7208195 - 7208123
Alignment:
Q  372 aaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaa 444  Q
    |||| ||||||||||||||||| || |||| |  ||||||||| | |||| ||||| |||||| |||||||||    
T  7208195 aaacagttttacaaatcaaacactggacaactaaagttgttctgttctgtccttcattttttagcaaatcaaa 7208123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 6e-23; HSPs: 58)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 284 - 454
Target Start/End: Complemental strand, 18597257 - 18597074
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaatt-------------tatcactttcctccagtttgttatgtccct 370  Q
    ||||||||| || |||||||||||||||||||| |||||||||||||||||||||||             | || ||| ||||| |||||| || |||||    
T  18597257 agacaacttatacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagattttgtcatgtcccttgcctccggtttgtcatatccct 18597158  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacactctaa 454  Q
     |||| ||||||||||||||||| || |||| || | |||||| |||| || ||||| ||||||||||||||||| ||||||||    
T  18597157 gaaacagttttacaaatcaaacactgaacaactgaaattgttcaatcccgtccttcattttttaacaaatcaaacgcactctaa 18597074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 32860160 - 32860255
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||| |||||||| |||||||||||||||||||||| || ||||||||||||||| | || ||| ||||| |||||| ||||||||||    
T  32860160 cctccagtttgtcatgtccctgaaactgttttacaaatcaaacactggacaattggagttgttttgtcatgtccttcattttttatcaaatcaaac 32860255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 284 - 445
Target Start/End: Original strand, 18057549 - 18057723
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat--------ttatca-----ctttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||  | ||||||||||||||||||||||        || |||     ||| | || ||||||| ||||  ||    
T  18057549 agacaacttgtacgtgggacaaaaagttgtactgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttacatctagtttgtcatgtatct 18057648  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||| |||||||||||||||||||| ||||||| |||||| ||||||||| ||||| |||||| | ||||||||    
T  18057649 caaacagttttacaaatcaaacattggacaattgaagttgtcctatcctgtccttcattttttagcgaatcaaac 18057723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 167022 - 166967
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  167022 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 166967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 284 - 445
Target Start/End: Original strand, 10960030 - 10960204
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||              | || ||| ||| ||||||||  ||| |||    
T  10960030 agacaacttgtacgtgggacaaaaagttgtgttgtggtttgttgagggacaaaaatatgagtttttgtcctgtcccttgccttcagtttgtcctgtacct 10960129  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| |||||||||||| |||| | ||||| |||||| ||||||||||    
T  10960130 gaaacagttttacaaatcaaacactggacaactggagttgttctgtcctatccttcattttttagcaaatcaaac 10960204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 2614926 - 2614981
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  2614926 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 2614981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 3259713 - 3259768
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||    
T  3259713 agacaacttgtacgtgggataaaaagttgtgttgtggtttggtgagggacaaaaat 3259768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 3379740 - 3379795
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||||||| |||||||||||||| |||||||||||||| |||||||||    
T  3379740 agacaacttgtatgtgagacaaaaagttgtgctatggtttggtgagcgacaaaaat 3379795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 10324210 - 10324155
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||    
T  10324210 agacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaat 10324155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 11279158 - 11279213
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||    
T  11279158 agacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaat 11279213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 454
Target Start/End: Original strand, 17867865 - 17868048
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    |||||| ||||| |||||||||||||||||| | ||||||| ||||||||||||||             || || ||| ||||||||||||  ||| |||    
T  17867865 agacaatttgtacgtgggacaaaaagttgtgctgtggtttgatgagggacaaaaatatgagtttttatcttgtcccttgcctccagtttgtcctgtacct 17867964  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacactctaa 454  Q
     |||| ||||||||||||||||| || |||  | |||||||||| |||||| ||||| |||||| |||||||||| ||| ||||    
T  17867965 gaaacagttttacaaatcaaacactggacagctagagttgttctgtcctgtccttcattttttagcaaatcaaacgcaccctaa 17868048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 454
Target Start/End: Original strand, 17877648 - 17877831
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    |||||| ||||| |||||||||||||||||| | ||||||| ||||||||||||||             || || ||| ||||||||||||  ||| |||    
T  17877648 agacaatttgtacgtgggacaaaaagttgtgctgtggtttgatgagggacaaaaatatgagtttttatcttgtcccttgcctccagtttgtcctgtacct 17877747  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacactctaa 454  Q
     |||| ||||||||||||||||| || |||  | |||||||||| |||||| ||||| |||||| |||||||||| ||| ||||    
T  17877748 gaaacagttttacaaatcaaacactggacagctagagttgttctgtcctgtccttcattttttagcaaatcaaacgcaccctaa 17877831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 24203392 - 24203447
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  24203392 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 24203447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 24242694 - 24242749
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  24242694 agacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 24242749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 32132479 - 32132424
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||    
T  32132479 agacaacttgtacgtgggacaaaaagttgtgttgtggattggtgagggacaaaaat 32132424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 378 - 445
Target Start/End: Original strand, 33041403 - 33041470
Alignment:
Q  378 ttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||||||| || |||| |||||||||||| |||| ||||||| |||||||||||||||||    
T  33041403 ttttacaaatcaaacactggacaactggagttgttctgtcctattcttcattttttaacaaatcaaac 33041470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 34684082 - 34684027
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||    
T  34684082 agacaacttgtacgtggaacaaaaagttgtgttgtggtttggtgagggacaaaaat 34684027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 445
Target Start/End: Complemental strand, 3932906 - 3932732
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat--------ttatca-----ctttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||| | |||||||||||| |||||||||        || ||      ||| ||||||||||||  ||| |||    
T  3932906 agacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagagacaaaaatatgagtttttgtcctgccccttgcctccagtttgtcctgtacct 3932807  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| | || ||||||| |||||| ||||| |||||| ||||||||||    
T  3932806 gaaacagttttacaaatcaaacactgaacaactagaattgttctgtcctgtccttcattttttagcaaatcaaac 3932732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 339
Target Start/End: Complemental strand, 11613888 - 11613835
Alignment:
Q  286 acaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  11613888 acaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 11613835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 444
Target Start/End: Complemental strand, 15277036 - 15276863
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||| ||||||||||| | ||||||||||||||||||||||              | || ||| ||||||||||||  ||| |||    
T  15277036 agacaacttgtacgtgggaaaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacct 15276937  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaa 444  Q
     |||| |||||||||||||||||||  |||| | |||||||||| || ||| ||||| |||||| |||||||||    
T  15276936 gaaacagttttacaaatcaaacattagacaactagagttgttctgtcatgtccttcattttttagcaaatcaaa 15276863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 4494214 - 4494159
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||  | ||||||||||||||||||||||    
T  4494214 agacaacttgtacgtgggacaaaaagttgtactgtggtttggtgagggacaaaaat 4494159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 8177980 - 8177925
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||| | |||||||||||||||||||| ||||||||| ||||||||||||    
T  8177980 agacaacttgaacgtgggacaaaaagttgtgttgtggtttggtaagggacaaaaat 8177925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 10485187 - 10485242
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||| ||||||||||||||    
T  10485187 agacaacttgtacgtgggacaaaaagttgtgctgtggtttgctgagggacaaaaat 10485242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 14808100 - 14808045
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||| | || |||||||||||||||||||| ||||||||||||||||||||||    
T  14808100 agacaacctatacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 14808045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 14925555 - 14925500
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||  | ||||||||||||||||||||||    
T  14925555 agacaacttgtaagtgggacaaaaagttgtactgtggtttggtgagggacaaaaat 14925500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 15277379 - 15277324
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||| ||||||||||| | ||||||||||||||||||||||    
T  15277379 agacaacttgtacgtgggataaaaagttgtgatgtggtttggtgagggacaaaaat 15277324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 31870199 - 31870144
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||| | || |||||||||||||||||||| ||||||||||||||||||||||    
T  31870199 agacaacctatacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 31870144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 32409951 - 32409896
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||  |||||||||||||||||| | ||||||||||||||||||||||    
T  32409951 agacaacttgtgagtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 32409896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 351 - 445
Target Start/End: Original strand, 11212367 - 11212461
Alignment:
Q  351 ctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||  ||| ||| |||| ||||||||||||||||| || |||| | |||||||||| ||| || ||||| |||||| ||||||||||    
T  11212367 ctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgttctgtcccgtccttcattttttagcaaatcaaac 11212461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 343 - 445
Target Start/End: Original strand, 34176932 - 34177034
Alignment:
Q  343 tcactttcctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatca 442  Q
    |||||| |||||||||||| |||| ||| |||| |||||||||||||||||    |||| | |||||||||| || ||| ||||| |||||| |||||||    
T  34176932 tcacttgcctccagtttgtcatgtacctgaaacagttttacaaatcaaacaagtgacaactagagttgttctgtcttgtccttcattttttagcaaatca 34177031  T
Q  443 aac 445  Q
    |||    
T  34177032 aac 34177034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 290 - 339
Target Start/End: Complemental strand, 11675467 - 11675418
Alignment:
Q  290 cttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||| |||||| |||||||||||||||||||||||||| |||||||||    
T  11675467 cttgtacgtgggataaaaagttgtgttatggtttggtgagagacaaaaat 11675418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 450
Target Start/End: Complemental strand, 14808010 - 14807938
Alignment:
Q  378 ttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacact 450  Q
    |||||||||||||||| || |||| |||||||||||| || ||| ||||| |||||| |||||||||| ||||    
T  14808010 ttttacaaatcaaacactggacaactggagttgttctgtcatgtccttcattttttagcaaatcaaacgcact 14807938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 340
Target Start/End: Original strand, 29054386 - 29054442
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaatt 340  Q
    |||||||||||| ||| |||||||||||||| | |||||||| ||||||||||||||    
T  29054386 agacaacttgtacgtgagacaaaaagttgtgctgtggtttggcgagggacaaaaatt 29054442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 346 - 445
Target Start/End: Original strand, 3259788 - 3259887
Alignment:
Q  346 ctttcctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||| ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| | |||||||| | || ||| ||||| |||||| ||||||||||    
T  3259788 cttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgttttgtcatgtccttcattttttagcaaatcaaac 3259887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 286 - 341
Target Start/End: Complemental strand, 9200485 - 9200430
Alignment:
Q  286 acaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattt 341  Q
    |||| |||||||||||||||||||||||  ||||||||||||||||| || |||||    
T  9200485 acaatttgtatgtgggacaaaaagttgttatatggtttggtgagggagaagaattt 9200430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 9902757 - 9902702
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||  ||||||||||||||    
T  9902757 agacaacttgtacgtgggacaaaaagttgtgctgtggtttaatgagggacaaaaat 9902702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 11279237 - 11279332
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||  ||| | | |||| ||||||||||||||||| || |||| |||||||||||| ||| ||  |||| |||||| ||||||||||    
T  11279237 cctccagtttgtcctgtacttgaaacagttttacaaatcaaacactggacaactggagttgttctgtcccgtctttcattttttagcaaatcaaac 11279332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 11382171 - 11382266
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||  ||| ||| |||| ||||||||||| ||||| || |||| | |||||||||| || ||| ||||| |||||| ||||||||||    
T  11382171 cctccagtttgtcctgtacctgaaacagttttacaaattaaacactggacaactagagttgttctgtcatgtccttcattttttagcaaatcaaac 11382266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 17443292 - 17443347
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||  | ||||||||||||||| ||||||    
T  17443292 agacaacttgtacgtgggacaaaaagttgtactgtggtttggtgagggataaaaat 17443347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 346 - 445
Target Start/End: Original strand, 24203467 - 24203566
Alignment:
Q  346 ctttcctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||| ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| |  ||||||||| || ||| ||||| |||||| ||||||||||    
T  24203467 cttgcctccagtttgtcctgtacctaaaacagttttacaaatcaaacactggacaactatagttgttctgtcatgtccttcattttttagcaaatcaaac 24203566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 448
Target Start/End: Original strand, 2615001 - 2615103
Alignment:
Q  346 ctttcctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||| |||||| |||||  ||| ||| ||||  |||||||||||||||| || |||| | |||||||||| || ||| ||||| |||||| ||||||||||    
T  2615001 cttgcctccaatttgtcctgtacctgaaacaattttacaaatcaaacagtggacaactagagttgttctgtcttgtccttcattttttagcaaatcaaac 2615100  T
Q  446 aca 448  Q
    |||    
T  2615101 aca 2615103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 284 - 329
Target Start/End: Original strand, 11382094 - 11382139
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgag 329  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||    
T  11382094 agacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgag 11382139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 11613789 - 11613716
Alignment:
Q  372 aaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||| ||||||||||||||||| || |||| |  ||||||||| |||||| ||||| |||||| ||||||||||    
T  11613789 aaacagttttacaaatcaaacactggacaactaaagttgttctgtcctgtccttcattttttagcaaatcaaac 11613716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 377 - 445
Target Start/End: Complemental strand, 31870090 - 31870022
Alignment:
Q  377 gttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||||||| || |||| |||||||||| | ||| || ||||| |||||| ||||||||||    
T  31870090 gttttacaaatcaaacactggacaactggagttgttatgtccagtccttcattttttagcaaatcaaac 31870022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 166943 - 166848
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||| |||||||  ||| ||| |||| ||||||||||||||||| || |||| | |||||||||| || | | ||||| |||||| ||||||||||    
T  166943 cctctagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaagtagagttgttctgtcatatccttcattttttagcaaatcaaac 166848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 445
Target Start/End: Original strand, 3379815 - 3379914
Alignment:
Q  346 ctttcctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||| ||||||||||||  |||  || |||| |||||| |||||||||| || |||| |  |||||||||||| ||| ||||| |||||| ||||||||||    
T  3379815 cttgcctccagtttgtcctgtatctgaaacagttttataaatcaaacactggacaactaaagttgttctatcatgtccttcattttttagcaaatcaaac 3379914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 10324131 - 10324036
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||| |||||||  ||| ||| |||| ||||||||||| ||||| || |||| | |||||||||| | |||| ||||| |||||| ||||||||||    
T  10324131 cctctagtttgtcctgtacctgaaacagttttacaaattaaacactgaacaactagagttgttctgttctgtccttcattttttagcaaatcaaac 10324036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 445
Target Start/End: Original strand, 10485262 - 10485361
Alignment:
Q  346 ctttcctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||| ||||||||||||  ||| ||| |||   |||||||||||||||| || |||| |||||||||| | || ||| ||||| |||||| ||||||||||    
T  10485262 cttgcctccagtttgtcctgtacctgaaataattttacaaatcaaacactggacaactggagttgttttgtcttgtccttcattttttagcaaatcaaac 10485361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 34176860 - 34176915
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||| ||||||| |||||||||||||||||| | || ||||||||| |||||||||    
T  34176860 agactacttgtacgtgggacaaaaagttgtgctgtgatttggtgagagacaaaaat 34176915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 355 - 445
Target Start/End: Complemental strand, 14925471 - 14925381
Alignment:
Q  355 agtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||  ||| ||| |||| ||||||||||||||||| || |||| || ||||||  | |||||| ||||| |||||||| ||||||||    
T  14925471 agtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactgaagttgtcatgtcctgtccttcattttttaacgaatcaaac 14925381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 351 - 445
Target Start/End: Complemental strand, 32409871 - 32409777
Alignment:
Q  351 ctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||  ||| ||| |||| ||||||||||||||||| || | || | ||||| |||| || ||| ||||| |||||| ||||||||||    
T  32409871 ctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggataactagagttattctgtcatgtccttcattttttagcaaatcaaac 32409777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 337
Target Start/End: Original strand, 11212287 - 11212340
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaa 337  Q
    |||||||||| | ||| ||||||| ||| |||| ||||||||||||||||||||    
T  11212287 agacaacttgcacgtgagacaaaaggttatgttgtggtttggtgagggacaaaa 11212340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 445
Target Start/End: Original strand, 23636334 - 23636427
Alignment:
Q  352 tccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||| | |||| ||| ||||  |||||||||||||||| || |||| || ||||||||| || | | ||||| |||||| ||||||||||    
T  23636334 tccagtttatcatgtacctaaaacaattttacaaatcaaacactgaacaactgaagttgttctgtcatatccttcattttttagcaaatcaaac 23636427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 3290702 - 3290755
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||| || ||||||  |||||||||||| ||||||||| ||||||||||||    
T  3290702 agacaacttatacgtggga--aaaagttgtgttgtggtttggtaagggacaaaaat 3290755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 445
Target Start/End: Original strand, 3290799 - 3290863
Alignment:
Q  381 tacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||| || |||| | |||||||||| || ||| ||||| |||||| ||||||||||    
T  3290799 tacaaatcaaacactgaacaactagagttgttctgtcatgtccttcattttttagcaaatcaaac 3290863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 454
Target Start/End: Complemental strand, 15277300 - 15277196
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacac 449  Q
    ||||||||||||  ||| ||| ||||  |||||||||||||||| || |||| | |||||||| | || |||  |||| |||||| |||||||||| |||    
T  15277300 cctccagtttgtcctgtaccttaaacaattttacaaatcaaacactggacaaatagagttgttttgtcttgtctttcattttttagcaaatcaaacgcac 15277201  T
Q  450 tctaa 454  Q
     ||||    
T  15277200 cctaa 15277196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 414
Target Start/End: Original strand, 24242769 - 24242837
Alignment:
Q  346 ctttcctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttct 414  Q
    ||| ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| | ||||||||||    
T  24242769 cttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactagagttgttct 24242837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 398 - 450
Target Start/End: Original strand, 34402945 - 34402997
Alignment:
Q  398 acaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacact 450  Q
    ||||||| ||||||||| || ||| || || ||||||||||||||||||||||    
T  34402945 acaattgaagttgttctgtcttgtcctccattttttaacaaatcaaacacact 34402997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 291 - 449
Target Start/End: Complemental strand, 43009 - 42839
Alignment:
Q  291 ttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattta-------------tcactttcctccagtttgttatgtccctcaaactg 377  Q
    ||||| |||||||||||||||||||| ||||||||||||||||| ||||||              || ||| ||||||||||||| ||||||| |||| |    
T  43009 ttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacacaaatttcagtttttgttctgtcccttgcctccagtttgttctgtccctgaaacag 42910  T
Q  378 ttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacac 449  Q
    |||||||||||||||| || || | |||||||||||| || | | ||||| |||||||||||||||||||||    
T  42909 ttttacaaatcaaacactggacta-tggagttgttctgtcttatccttcattttttaacaaatcaaacacac 42839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 373030 - 372975
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  373030 agacaacttgtacgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 372975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 1709 - 1652
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattt 341  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  1709 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaattt 1652  T

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Target: scaffold0650; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 1630 - 1535
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||||  | ||| | |||| ||||||||||||||||| || | || || ||||||||| |  ||| ||||| |||||||||||||||||    
T  1630 cctccagtttgtcctatccttgaaacagttttacaaatcaaacactggagaactgaagttgttctgttttgtccttcattttttaacaaatcaaac 1535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 12602 - 12547
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  12602 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 12547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 18120 - 18065
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  18120 agacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 18065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 284 - 445
Target Start/End: Original strand, 15202 - 15376
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat-------------ttatcactttcctccagtttgttatgtccct 370  Q
    |||||||||||| ||| |||||||||||||||| |||||||||| |||||||||||             || || ||| ||||||||||||  ||| |||    
T  15202 agacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgggggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcctgtacct 15301  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||||| |||||||| | || ||| ||||| |||||| ||||||||||    
T  15302 gaaacagttttacaaatcaaacactggacaattagagttgttttgtcttgtccttcattttttagcaaatcaaac 15376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 339
Target Start/End: Complemental strand, 5503 - 5451
Alignment:
Q  287 caacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  5503 caacttgtatgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 5451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 350 - 444
Target Start/End: Complemental strand, 5426 - 5332
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaa 444  Q
    ||||||||||||  ||| ||| |||| ||||||||||||||||| || |||| || ||||||||| | |||| ||||| |||||| |||||||||    
T  5426 cctccagtttgtcttgtacctgaaacagttttacaaatcaaacactggacaactgaagttgttctgttctgtccttcattttttagcaaatcaaa 5332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 4645 - 4590
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||| || |||||||||||||||||||| ||||||||||||||||||||||    
T  4645 agacaacttttacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 4590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 445
Target Start/End: Complemental strand, 4538 - 4471
Alignment:
Q  378 ttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||||||||| || |||| | |||||||||| |||||| ||||| |||||| ||||||||||    
T  4538 ttttacaaatcaaacactggacaactagagttgttctgtcctgtccttcattttttagcaaatcaaac 4471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 15360 - 15265
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||| |  ||| ||| |||| ||||||||||||||||| || |||| | ||||||||||||| ||||||||| |||||| ||||||||||    
T  15360 cctccagtttatcctgtacctgaaacagttttacaaatcaaacactgaacaactagagttgttctatcatgttcttcattttttagcaaatcaaac 15265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 15447 - 15392
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    ||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  15447 agacaacttgtacatgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 15392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 2404 - 2349
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  2404 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 2349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 454
Target Start/End: Complemental strand, 2325 - 2222
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaacacac 449  Q
    |||||| |||||  ||| ||| |||| ||||||||||||||||| || | || |  |||||||||||||||| ||||| |||||| |||||||||| |||    
T  2325 cctccaatttgtcctgtacctgaaacagttttacaaatcaaacactgaa-aactaaagttgttctatcctgtccttcattttttagcaaatcaaacgcac 2227  T
Q  450 tctaa 454  Q
     ||||    
T  2226 cctaa 2222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 101979 - 102034
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  101979 agacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 102034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 445
Target Start/End: Original strand, 102080 - 102153
Alignment:
Q  372 aaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||| ||||||||||||||||| || | || | |||||||||| || ||| ||||| |||||| ||||||||||    
T  102080 aaacagttttacaaatcaaacactggataactagagttgttctgtcatgtccttcattttttagcaaatcaaac 102153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 445
Target Start/End: Original strand, 23605 - 23779
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaa--------tttatca-----ctttcctccagtttgttatgtccct 370  Q
    |||||||||||| |||||||||||||||||| | ||||||||||| |||||||||        ||| |||     ||| |||| |||||||  ||| |||    
T  23605 agacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgaaggacaaaaatatgagtttttgtcatgtcccttgcctcaagtttgtcctgtacct 23704  T
Q  371 caaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
     |||| ||||||||||||||||| || |||| | |||||||||| |||||  ||||| |||||| ||||||||||    
T  23705 gaaacagttttacaaatcaaacactggacaactagagttgttctgtcctgcccttcattttttagcaaatcaaac 23779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 19156 - 19101
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | || |||||||||||||||||||    
T  19156 agacaacttgtacgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaat 19101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 346 - 445
Target Start/End: Complemental strand, 2487 - 2388
Alignment:
Q  346 ctttcctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    |||||||||| |||||  ||| ||| |||| ||||||||||||||||| || |||| | |||||||| | || ||| ||||| |||||| ||||||||||    
T  2487 ctttcctccaatttgtcttgtacctgaaacagttttacaaatcaaacactgaacaactagagttgttatgtcttgtccttcaatttttagcaaatcaaac 2388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 286 - 341
Target Start/End: Complemental strand, 33608 - 33553
Alignment:
Q  286 acaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaattt 341  Q
    |||| ||||| |||||||||||||||||||| ||||||| |||||||||| |||||    
T  33608 acaatttgtacgtgggacaaaaagttgtgttgtggtttgatgagggacaagaattt 33553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 51469 - 51523
Alignment:
Q  284 agacaacttgtatgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 339  Q
    |||||||||||| |||||||||||||||||| | |||||| |||||||||||||||    
T  51469 agacaacttgtacgtgggacaaaaagttgtgctgtggttt-gtgagggacaaaaat 51523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 352 - 445
Target Start/End: Original strand, 51549 - 51642
Alignment:
Q  352 tccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttcagtttttaacaaatcaaac 445  Q
    ||||||||||| ||  ||| |||| ||||||||||||||||| || ||||||  ||||||||| |  ||| ||||| |||||| ||||||||||    
T  51549 tccagtttgttctgcacctgaaacagttttacaaatcaaacactggacaattaaagttgttctgttttgtccttcattttttatcaaatcaaac 51642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 19143 - 19047
Alignment:
Q  350 cctccagtttgttatgtccctcaaactgttttacaaatcaaacattgcacaattggagttgttctatcctgttcttca-gtttttaacaaatcaaac 445  Q
    ||||| |||| || ||||||| |||| ||||||||||||||||| || | || |||| ||||| | |||| | |||||  |||||||||||||||||    
T  19143 cctcctgtttattctgtccctgaaacagttttacaaatcaaacactggataactggaattgttatgtcctatccttcatttttttaacaaatcaaac 19047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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