View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1751-Insertion-16 (Length: 479)
Name: NF1751-Insertion-16
Description: NF1751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1751-Insertion-16 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 441; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 441; E-Value: 0
Query Start/End: Original strand, 7 - 479
Target Start/End: Complemental strand, 4224137 - 4223665
Alignment:
| Q |
7 |
aagaaccaccatcttgattctcatgcaagtaaaattccaaattcaccattcgaacaaactccatcaatataactctttcacctgataatgagagaatatg |
106 |
Q |
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| T |
4224137 |
aagaaccaccatcttgattctcatgcaagtaaaattccaaattcgccattcgaacaaactccatcaatataactctttcacctgataatgagagaatatg |
4224038 |
T |
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| Q |
107 |
aattacatcaagggatacataagacttatatagtcgacgagaaccgagaagaacaactaactagtataactaacgtttatatggaatacctggtgcttct |
206 |
Q |
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| T |
4224037 |
aattacatcaagagatacataagacttatatagtcgacgagaaccgagaagaacaactaactagtataactaacgtttatatggaatacctggtgcttct |
4223938 |
T |
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| Q |
207 |
gagaatcctattataggaacaacgttagggtgttgagctaaagagagccatttcatgacagatgaaaaaccaaatcctgcgttgcttaacacaagaacag |
306 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
4223937 |
gagaatcctattataggaacaacgttagggtgttgagataaagagagccatttcatcacagatgaaaaaccaaaacctgcgttgcttaacacaagaacag |
4223838 |
T |
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| Q |
307 |
aatgaatgcgtttcacagctacaagctcttcattttcgagtttaccagcataaactgttcctaaacgaccttttccaatgatactcctatggttgaagcc |
406 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
4223837 |
aatgaatgcgtttcacagctacaagctcttcattttcgagtttaccagcataaactgttcctaaacgaccttttccaatgattctcctatggttgaagcc |
4223738 |
T |
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| Q |
407 |
atttgtagcaatatcaataactgttaaagggtatacaagagcactttgtttcactggaagtgtttcttctgat |
479 |
Q |
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| T |
4223737 |
atttgtagcaatatcaataactgttaaagggtataaaagagcaatttgtttcactggaagtgtttcttctgat |
4223665 |
T |
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