View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1751-Insertion-18 (Length: 389)
Name: NF1751-Insertion-18
Description: NF1751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1751-Insertion-18 |
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Alignment Details
Target: chr8 (Bit Score: 342; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 7 - 377
Target Start/End: Complemental strand, 39059132 - 39058756
Alignment:
| Q |
7 |
agggagtagggtagtatcttgaacaatttcactaccccacccattcttacaatatggtttctgacccgttccgttgtagaattgaactaagctccattcc |
106 |
Q |
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| T |
39059132 |
agggagtagggtagtatcttgaacaatttcactaccccacccattcttacaatatggtttctgacccgttccgttgtagaattgaactaagctccattcc |
39059033 |
T |
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| Q |
107 |
ttgaatgtaaatatgttttgttattgtacctgtaatggaatagactagtcccatatttaagattttatattgcaatttagatgtaatttctttaaaattg |
206 |
Q |
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| T |
39059032 |
ttgaatgtaaatatgttttgttattgtacctgtaatggaatagactagtcccatatttaagattttatattgcaatttagaggtaatttctttaaaattg |
39058933 |
T |
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| Q |
207 |
tacgtgtatacacatgcttaatcaatcaggggttagcttttttgggccacttgctttaaattattttctatggtttagttagaattggaatataatttcg |
306 |
Q |
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| T |
39058932 |
tacgtgtatacacatgcttaatcaatcaggggttagcttttttgggccacttgctttaaattattttctatggtttagttagaattggaatataatttcg |
39058833 |
T |
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| Q |
307 |
tggaaaaagaaggaacgtacggaaca------ttgattgatttgtgcttccttgtcatatttgatcgtatttatttt |
377 |
Q |
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| T |
39058832 |
tggaaaaagaagaagcgtacggaacacatatcttgattgatttgtgcttccttgtcatatttgatcgtatttatttt |
39058756 |
T |
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