View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17512_high_21 (Length: 246)
Name: NF17512_high_21
Description: NF17512
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17512_high_21 |
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Alignment Details
Target: chr6 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 15 - 227
Target Start/End: Original strand, 32322915 - 32323127
Alignment:
| Q |
15 |
atactccactgattaggccagctttcattactgtggataaatatcttctatcaaaggtcagaaattgaattgatataggatttagtcctttgtctagatg |
114 |
Q |
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| T |
32322915 |
atactccactgattaggccagctttcattactgtggataaatatcttctatcaaaggtcagaaattgaattgatataggatttagtcctttgtctagatg |
32323014 |
T |
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| Q |
115 |
ccccacctacatatgtataaacatcaaatatcaaatgtaagaagnnnnnnnntgttgtattttatataaataagatactaagaaattgaagaaaaataat |
214 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32323015 |
ccccacctacatatgtataaacatcaaatatcaaatataagaagaaaaaaaatgttgtattttatataaataagatactaagaaattgaagaaaaataat |
32323114 |
T |
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| Q |
215 |
actaattataagt |
227 |
Q |
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||||||||||||| |
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| T |
32323115 |
actaattataagt |
32323127 |
T |
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