View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17512_low_11 (Length: 314)

Name: NF17512_low_11
Description: NF17512
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17512_low_11
NF17512_low_11
[»] chr8 (14 HSPs)
chr8 (17-129)||(15004547-15004659)
chr8 (17-129)||(22354239-22354351)
chr8 (17-129)||(22342579-22342691)
chr8 (192-301)||(22342415-22342524)
chr8 (192-306)||(15004714-15004828)
chr8 (259-306)||(9995307-9995354)
chr8 (257-306)||(43801112-43801161)
chr8 (255-306)||(30232864-30232915)
chr8 (263-306)||(36701203-36701246)
chr8 (253-303)||(13248676-13248726)
chr8 (253-307)||(31627564-31627617)
chr8 (199-306)||(33365014-33365120)
chr8 (253-306)||(24616860-24616913)
chr8 (259-307)||(39921340-39921387)
[»] chr3 (13 HSPs)
chr3 (17-129)||(44270180-44270292)
chr3 (17-129)||(1672198-1672310)
chr3 (192-306)||(44273591-44273705)
chr3 (192-306)||(1668776-1668890)
chr3 (253-303)||(11342445-11342495)
chr3 (253-307)||(4774490-4774543)
chr3 (254-303)||(37735160-37735209)
chr3 (253-306)||(52965197-52965250)
chr3 (199-306)||(39085348-39085454)
chr3 (253-306)||(12026239-12026291)
chr3 (248-305)||(28700394-28700451)
chr3 (253-306)||(53592968-53593020)
chr3 (257-305)||(46551678-46551726)
[»] chr4 (7 HSPs)
chr4 (17-129)||(26071392-26071504)
chr4 (192-306)||(26074818-26074932)
chr4 (253-306)||(33616135-33616188)
chr4 (253-307)||(35671033-35671087)
chr4 (257-306)||(26687784-26687833)
chr4 (257-306)||(24221263-24221312)
chr4 (253-305)||(39068050-39068102)
[»] chr7 (6 HSPs)
chr7 (17-129)||(10461197-10461310)
chr7 (192-306)||(10461023-10461142)
chr7 (192-309)||(13071671-13071789)
chr7 (253-306)||(26626028-26626081)
chr7 (253-305)||(44523895-44523947)
chr7 (253-306)||(33438500-33438552)
[»] chr2 (9 HSPs)
chr2 (253-306)||(5703186-5703239)
chr2 (253-306)||(13369239-13369292)
chr2 (253-306)||(17205701-17205754)
chr2 (253-306)||(14793877-14793930)
chr2 (253-306)||(22417120-22417172)
chr2 (258-296)||(20463946-20463984)
chr2 (253-307)||(24934993-24935047)
chr2 (253-307)||(25683685-25683739)
chr2 (253-306)||(5533260-5533313)
[»] chr1 (11 HSPs)
chr1 (253-307)||(32829979-32830033)
chr1 (253-306)||(19263546-19263599)
chr1 (259-306)||(28251516-28251563)
chr1 (253-306)||(8059029-8059081)
chr1 (253-306)||(14949481-14949534)
chr1 (259-306)||(14190494-14190541)
chr1 (199-307)||(51251235-51251343)
chr1 (199-306)||(31200556-31200662)
chr1 (253-306)||(14939465-14939518)
chr1 (253-306)||(14944709-14944762)
chr1 (253-306)||(28882494-28882547)
[»] chr5 (5 HSPs)
chr5 (253-306)||(40484960-40485012)
chr5 (257-307)||(4421846-4421896)
chr5 (269-306)||(14634728-14634765)
chr5 (253-306)||(23927823-23927875)
chr5 (257-302)||(34490640-34490685)
[»] chr6 (5 HSPs)
chr6 (253-305)||(24495743-24495795)
chr6 (199-306)||(8770545-8770651)
chr6 (257-306)||(9606518-9606567)
chr6 (253-307)||(35165971-35166025)
chr6 (253-306)||(4151466-4151519)


Alignment Details
Target: chr8 (Bit Score: 109; Significance: 8e-55; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 15004547 - 15004659
Alignment:
Q  17 atacaaaaaagagcccaaaacataacaagaaaagattcttgatgtcatcattaacattccccacaattcaaaagagtcctgacttcatcgtttatattct 116  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15004547 atacaaaaaagagcccaaaacataacaagaaaagagtcttgatgtcatcattaacattccccacaattcaaaagagtcctgacttcatcgtttatattct 15004646  T
Q  117 ccatctccaccaa 129  Q
    |||||||||||||    
T  15004647 ccatctccaccaa 15004659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 22354351 - 22354239
Alignment:
Q  17 atacaaaaaagagcccaaaacataacaagaaaagattcttgatgtcatcattaacattccccacaattcaaaagagtcctgacttcatcgtttatattct 116  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22354351 atacaaaaaagagcccaaaacataacaagaaaagagtcttgatgtcatcattaacattccccacaattcaaaagagtcctgacttcatcgtttatattct 22354252  T
Q  117 ccatctccaccaa 129  Q
    |||||||||||||    
T  22354251 ccatctccaccaa 22354239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 22342691 - 22342579
Alignment:
Q  17 atacaaaaaagagcccaaaacataacaagaaaagattcttgatgtcatcattaacattccccacaattcaaaagagtcctgacttcatcgtttatattct 116  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22342691 atacaaaaaagagcccaaaacataacaagaaaagagtcttgatgtcatcattaaaattccccacaattcaaaagagtcctgacttcatcgtttatattct 22342592  T
Q  117 ccatctccaccaa 129  Q
    |||||||||||||    
T  22342591 ccatctccaccaa 22342579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 22342524 - 22342415
Alignment:
Q  192 atatcaatttttaaaaccacattcacccatttacccgacccaacccgnnnnnnnggttttctttgggtgggtttgaccgggttttccgggttgacccaac 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||    
T  22342524 atatcaatttttaaaaccacattcacccatttacccgacccaacccgtttttttggttttctttgggtgggtttgaccgggttttccgggttgacccaac 22342425  T
Q  292 ccatgtacac 301  Q
    ||||||||||    
T  22342424 ccatgtacac 22342415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 192 - 306
Target Start/End: Original strand, 15004714 - 15004828
Alignment:
Q  192 atatcaatttttaaaaccacattcacccatttacccgacccaacccgnnnnnnnggttttctttgggtgggtttgaccgggttttccgggttgacccaac 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||| |||||||||||||||||||||    
T  15004714 atatcaatttttaaaaccacattcacccatttacccgacccaacccgtttttttggttttctttaggtgggtttgacctggttttccgggttgacccaac 15004813  T
Q  292 ccatgtacaccccta 306  Q
    |||||||||||||||    
T  15004814 ccatgtacaccccta 15004828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 9995307 - 9995354
Alignment:
Q  259 tgggtttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    ||||||||||||||||||| |||||||||||||||||| |||| ||||    
T  9995307 tgggtttgaccgggttttctgggttgacccaacccatgaacactccta 9995354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 257 - 306
Target Start/End: Original strand, 43801112 - 43801161
Alignment:
Q  257 ggtgggtttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    ||||||||||||||||||||  |||||| ||||||||||| |||||||||    
T  43801112 ggtgggtttgaccgggttttttgggttggcccaacccatgaacaccccta 43801161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 30232915 - 30232864
Alignment:
Q  255 tgggtgggtttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    |||||| |||||||| |||||| ||||||||||||||| ||||| |||||||    
T  30232915 tgggtgagtttgaccaggtttttcgggttgacccaacctatgtataccccta 30232864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 263 - 306
Target Start/End: Original strand, 36701203 - 36701246
Alignment:
Q  263 tttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    |||||||||||||| |  ||||||||||||||||||||||||||    
T  36701203 tttgaccgggttttacatgttgacccaacccatgtacaccccta 36701246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 303
Target Start/End: Original strand, 13248676 - 13248726
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacaccc 303  Q
    |||||||||||||||  |||||||| ||||| |||||||||||| ||||||    
T  13248676 tttgggtgggtttgattgggttttctgggtttacccaacccatgaacaccc 13248726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 31627617 - 31627564
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacacccctaa 307  Q
    |||||||||||||||  |||||||  ||||| |||||||||||||||||||||||    
T  31627617 tttgggtgggtttgat-gggttttttgggtttacccaacccatgtacacccctaa 31627564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 306
Target Start/End: Complemental strand, 33365120 - 33365014
Alignment:
Q  199 tttttaaaaccacattcacccatttacccgacccaacccgnnnnnnnggttttctttgggtgggtttgaccgggttttccgggttgacccaacccatgta 298  Q
    |||||||||||| || |||||| | |||| |||||||||        || ||| ||||| |||||||||| |||||||  ||||| ||||||||||||||    
T  33365120 tttttaaaaccatatccacccaatcacccaacccaacccacttttttggatttttttggatgggtttgac-gggttttttgggtttacccaacccatgta 33365022  T
Q  299 caccccta 306  Q
    ||||||||    
T  33365021 caccccta 33365014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 24616913 - 24616860
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    ||||| ||| ||||||| ||||||| |||||||||||||||||| |||| ||||    
T  24616913 tttggatggatttgaccaggttttctgggttgacccaacccatgaacactccta 24616860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 307
Target Start/End: Original strand, 39921340 - 39921387
Alignment:
Q  259 tgggtttgaccgggttttccgggttgacccaacccatgtacacccctaa 307  Q
    |||||||||| |||||||  |||||||||||||||||| ||||||||||    
T  39921340 tgggtttgac-gggttttttgggttgacccaacccatgaacacccctaa 39921387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 8e-55; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 44270180 - 44270292
Alignment:
Q  17 atacaaaaaagagcccaaaacataacaagaaaagattcttgatgtcatcattaacattccccacaattcaaaagagtcctgacttcatcgtttatattct 116  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44270180 atacaaaaaagagcccaaaacataacaagaaaagagtcttgatgtcatcattaacattccccacaattcaaaagagtcctgacttcatcgtttatattct 44270279  T
Q  117 ccatctccaccaa 129  Q
    |||||||||||||    
T  44270280 ccatctccaccaa 44270292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 1672310 - 1672198
Alignment:
Q  17 atacaaaaaagagcccaaaacataacaagaaaagattcttgatgtcatcattaacattccccacaattcaaaagagtcctgacttcatcgtttatattct 116  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1672310 atacaaaaaagagcccaaaacataacaagaaacgagtcttgatgtcatcattaacattccccacaattcaaaagagtcctgacttcatcgtttatattct 1672211  T
Q  117 ccatctccaccaa 129  Q
    |||||||||||||    
T  1672210 ccatctccaccaa 1672198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 192 - 306
Target Start/End: Original strand, 44273591 - 44273705
Alignment:
Q  192 atatcaatttttaaaaccacattcacccatttacccgacccaacccgnnnnnnnggttttctttgggtgggtttgaccgggttttccgggttgacccaac 291  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||        ||||||||||||||||||||||||||||||||||||||||||||||    
T  44273591 atatcaatttttaaaaccacattcacccatttacccggcccaacccatttttttggttttctttgggtgggtttgaccgggttttccgggttgacccaac 44273690  T
Q  292 ccatgtacaccccta 306  Q
    |||||||||||||||    
T  44273691 ccatgtacaccccta 44273705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 192 - 306
Target Start/End: Complemental strand, 1668890 - 1668776
Alignment:
Q  192 atatcaatttttaaaaccacattcacccatttacccgacccaacccgnnnnnnnggttttctttgggtgggtttgaccgggttttccgggttgacccaac 291  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||        ||||||||||||||||||||||||||||||||||| || |||||||    
T  1668890 atatcaatttttaaaaccacattcacccatttacccggcccaacccatttttttggttttctttgggtgggtttgaccgggttttccggattaacccaac 1668791  T
Q  292 ccatgtacaccccta 306  Q
    |||||||||||||||    
T  1668790 ccatgtacaccccta 1668776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 303
Target Start/End: Complemental strand, 11342495 - 11342445
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacaccc 303  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  11342495 tttgggtgggtttgaccaagttttccggtttgacccaacccatgtacaccc 11342445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 4774490 - 4774543
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacacccctaa 307  Q
    |||||||||||||||| |||||||  ||||| |||||||||||||||||||||||    
T  4774490 tttgggtgggtttgac-gggttttttgggtttacccaacccatgtacacccctaa 4774543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 254 - 303
Target Start/End: Complemental strand, 37735209 - 37735160
Alignment:
Q  254 ttgggtgggtttgaccgggttttccgggttgacccaacccatgtacaccc 303  Q
    |||||||||||||||| | ||||| |||||||||||||||||| ||||||    
T  37735209 ttgggtgggtttgaccagattttctgggttgacccaacccatgaacaccc 37735160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 52965250 - 52965197
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    ||||||||||||||||||| |||||  ||||||||||||||||| |||| ||||    
T  52965250 tttgggtgggtttgaccggattttctaggttgacccaacccatgaacactccta 52965197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 306
Target Start/End: Original strand, 39085348 - 39085454
Alignment:
Q  199 tttttaaaaccacattcacccatttacccgacccaacccgnnnnnnnggttttctttgggtgggtttgaccgggttttccgggttgacccaacccatgta 298  Q
    |||||||||||| || |||||| | |||| |||||||||        || ||| ||||| |||||||||| |||||||  ||||| ||||||||||||||    
T  39085348 tttttaaaaccatatccacccaatcacccaacccaacccacttttttgggtttttttggatgggtttgac-gggttttttgggtttacccaacccatgta 39085446  T
Q  299 caccccta 306  Q
    ||||||||    
T  39085447 caccccta 39085454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 306
Target Start/End: Original strand, 12026239 - 12026291
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    |||||||||||||||| || ||||  ||||| ||||||||||||||||||||||    
T  12026239 tttgggtgggtttgac-ggtttttttgggtttacccaacccatgtacaccccta 12026291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 305
Target Start/End: Original strand, 28700394 - 28700451
Alignment:
Q  248 ttttctttgggtgggtttgaccgggttttccgggttgacccaacccatgtacacccct 305  Q
    |||| ||||| || ||||||||||||||| ||||||||||||||| ||| | ||||||    
T  28700394 ttttttttggatgagtttgaccgggtttttcgggttgacccaacctatgcatacccct 28700451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 306
Target Start/End: Original strand, 53592968 - 53593020
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    |||||||||||||||| || ||||  |||||||||||||||||| |||||||||    
T  53592968 tttgggtgggtttgac-ggtttttttgggttgacccaacccatgaacaccccta 53593020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 305
Target Start/End: Complemental strand, 46551726 - 46551678
Alignment:
Q  257 ggtgggtttgaccgggttttccgggttgacccaacccatgtacacccct 305  Q
    ||||| |||||||| |||||| || ||||||||||||||| ||||||||    
T  46551726 ggtggatttgaccgagttttctggattgacccaacccatgaacacccct 46551678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 2e-52; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 26071392 - 26071504
Alignment:
Q  17 atacaaaaaagagcccaaaacataacaagaaaagattcttgatgtcatcattaacattccccacaattcaaaagagtcctgacttcatcgtttatattct 116  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26071392 atacaaaaaagagcccaaaacataacaagaaaagagtcttgatgtcatcattaacattccccacaattcaaaagagtcttgacttcatcgtttatattct 26071491  T
Q  117 ccatctccaccaa 129  Q
    |||||||||||||    
T  26071492 ccatctccaccaa 26071504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 192 - 306
Target Start/End: Original strand, 26074818 - 26074932
Alignment:
Q  192 atatcaatttttaaaaccacattcacccatttacccgacccaacccgnnnnnnnggttttctttgggtgggtttgaccgggttttccgggttgacccaac 291  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||        |||||||||||||||||||||||||| |||| ||||||||||||||    
T  26074818 atatcaatttttaaaaccacattcacccatttacccggcccaacccatttttttggttttctttgggtgggtttgaccggatttttcgggttgacccaac 26074917  T
Q  292 ccatgtacaccccta 306  Q
    |||||||||||||||    
T  26074918 ccatgtacaccccta 26074932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 253 - 306
Target Start/End: Original strand, 33616135 - 33616188
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    ||||||||||||||||||||||||  |||||||||||||||||| |||||||||    
T  33616135 tttgggtgggtttgaccgggttttttgggttgacccaacccatgaacaccccta 33616188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 35671033 - 35671087
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacacccctaa 307  Q
    ||||||||||||||| |||||||||  ||||||||||||||||| ||||||||||    
T  35671033 tttgggtgggtttgatcgggttttctaggttgacccaacccatgaacacccctaa 35671087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 306
Target Start/End: Complemental strand, 26687833 - 26687784
Alignment:
Q  257 ggtgggtttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||||||    
T  26687833 ggtgagtttgaccgggttttctgggttgacccaacccatgaacaccccta 26687784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 257 - 306
Target Start/End: Complemental strand, 24221312 - 24221263
Alignment:
Q  257 ggtgggtttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    |||||||||||||| |||||  |||||||||||||||||| |||||||||    
T  24221312 ggtgggtttgaccgagttttgtgggttgacccaacccatgaacaccccta 24221263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 39068102 - 39068050
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacacccct 305  Q
    |||| |||||||||||||| ||||| | |||||||||||||||| ||||||||    
T  39068102 tttgagtgggtttgaccggattttctgagttgacccaacccatgaacacccct 39068050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 98; Significance: 3e-48; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 10461310 - 10461197
Alignment:
Q  17 atacaaaaaagagcccaaaacataacaagaaaa-gattcttgatgtcatcattaacattccccacaattcaaaagagtcctgacttcatcgtttatattc 115  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10461310 atacaaaaaagagcccaaaacataacaagaaaaagagtcttgatgtcatcattaacattccccacaattcaaaagagtcatgacttcatcgtttatattc 10461211  T
Q  116 tccatctccaccaa 129  Q
    ||||||||||||||    
T  10461210 tccatctccaccaa 10461197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 192 - 306
Target Start/End: Complemental strand, 10461142 - 10461023
Alignment:
Q  192 atatcaatttttaaaaccacattcacccatttacccgacccaaccc-----gnnnnnnnggttttctttgggtgggtttgaccgggttttccgggttgac 286  Q
    |||||||||||||||||||||| |||||||||||||||||||||||     |       |||||||||||||||||||||||||||||||||||||||||    
T  10461142 atatcaatttttaaaaccacatgcacccatttacccgacccaacccaacccgtttttttggttttctttgggtgggtttgaccgggttttccgggttgac 10461043  T
Q  287 ccaacccatgtacaccccta 306  Q
    ||||||||||||||||||||    
T  10461042 ccaacccatgtacaccccta 10461023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 192 - 309
Target Start/End: Original strand, 13071671 - 13071789
Alignment:
Q  192 atatcaatttttaaaaccacattcacccatttacccgacccaacccgnnnnnnnggttttctttgg-gtgggtttgaccgggttttccgggttgacccaa 290  Q
    ||||| |||||||||||||||||||||||||||||||  ||||||||       |||||| |||   ||||||||||  ||||||| ||| |||||||||    
T  13071671 atatcgatttttaaaaccacattcacccatttacccggtccaacccgtttttttggtttttttttttgtgggtttgatggggtttttcggattgacccaa 13071770  T
Q  291 cccatgtacacccctaaat 309  Q
    |||||||||||||||||||    
T  13071771 cccatgtacacccctaaat 13071789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 306
Target Start/End: Original strand, 26626028 - 26626081
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    ||||||||||||||||||||||||  |||||||||||||||||  |||||||||    
T  26626028 tttgggtgggtttgaccgggttttttgggttgacccaacccataaacaccccta 26626081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 44523947 - 44523895
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacacccct 305  Q
    ||||||||  ||||||||||||||| ||||||||||||||| || ||||||||    
T  44523947 tttgggtgaatttgaccgggttttctgggttgacccaacccgtgaacacccct 44523895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 33438552 - 33438500
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    ||||| |||||||||| |||||||  ||||| ||||||||||||||||||||||    
T  33438552 tttggatgggtttgac-gggttttttgggtttacccaacccatgtacaccccta 33438500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 253 - 306
Target Start/End: Original strand, 5703186 - 5703239
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| |||||||||    
T  5703186 tttgggtggatttgaccgggttttctgggttgacccaacccatgaacaccccta 5703239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 13369292 - 13369239
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    ||||||| ||||||||||||||||| |||||||||||||||||| |||||||||    
T  13369292 tttgggtaggtttgaccgggttttctgggttgacccaacccatgaacaccccta 13369239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 17205754 - 17205701
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    ||||||||||||||| ||| ||||| |||||||||||||||||| |||||||||    
T  17205754 tttgggtgggtttgatcggattttctgggttgacccaacccatgaacaccccta 17205701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 253 - 306
Target Start/End: Original strand, 14793877 - 14793930
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    |||||||||||||||| |  ||||  ||||||||||||||||||||||||||||    
T  14793877 tttgggtgggtttgactgtattttttgggttgacccaacccatgtacaccccta 14793930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 253 - 306
Target Start/End: Original strand, 22417120 - 22417172
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    |||||||||||||||| |||||||  ||||| ||||||||||||||||||||||    
T  22417120 tttgggtgggtttgac-gggttttttgggtttacccaacccatgtacaccccta 22417172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 296
Target Start/End: Complemental strand, 20463984 - 20463946
Alignment:
Q  258 gtgggtttgaccgggttttccgggttgacccaacccatg 296  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  20463984 gtgggtttgaccggattttctgggttgacccaacccatg 20463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 24935047 - 24934993
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacacccctaa 307  Q
    ||||||||||||||| ||||||||  |||||||||||||| ||| |||| |||||    
T  24935047 tttgggtgggtttgatcgggttttatgggttgacccaaccaatgaacacacctaa 24934993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 25683739 - 25683685
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacacccctaa 307  Q
    ||||||||||||||| ||||||||  |||||||||||||| ||| |||| |||||    
T  25683739 tttgggtgggtttgatcgggttttttgggttgacccaaccaatgaacacacctaa 25683685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 5533313 - 5533260
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    ||||||||| ||||||| ||||||  ||||||||||||||||| | ||||||||    
T  5533313 tttgggtggatttgaccaggttttatgggttgacccaacccatatccaccccta 5533260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 32829979 - 32830033
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacacccctaa 307  Q
    ||||||||||||||||||| ||||| |||||||||||||||||| | ||||||||    
T  32829979 tttgggtgggtttgaccggattttctgggttgacccaacccatgaatacccctaa 32830033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 19263599 - 19263546
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    ||||||||||||| ||||||||||| || ||||||||||||||| |||||||||    
T  19263599 tttgggtgggtttaaccgggttttctggattgacccaacccatggacaccccta 19263546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 28251516 - 28251563
Alignment:
Q  259 tgggtttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    ||||||||||||||||||| |||||||||||||||||| |||| ||||    
T  28251516 tgggtttgaccgggttttctgggttgacccaacccatgaacactccta 28251563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 8059081 - 8059029
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    |||||||||||||||| |||||||  ||||| ||||||||||||||||||||||    
T  8059081 tttgggtgggtttgac-gggttttttgggtttacccaacccatgtacaccccta 8059029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 14949534 - 14949481
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    ||||||||||||||  ||||||||| |||||||||||||||||  |||||||||    
T  14949534 tttgggtgggtttgctcgggttttctgggttgacccaacccataaacaccccta 14949481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 14190494 - 14190541
Alignment:
Q  259 tgggtttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    |||||||||||||| |||  |||||||||||||||||| |||||||||    
T  14190494 tgggtttgaccggggtttttgggttgacccaacccatgaacaccccta 14190541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 307
Target Start/End: Original strand, 51251235 - 51251343
Alignment:
Q  199 tttttaaaaccacattcacccatttacccgacccaacccgnnnnnnnggttttctttgggtgggtttgaccgggttttccgggttgacccaacccatgta 298  Q
    |||||||||||| || |||||| | |||| |||||||||        || ||| |||||||||||||||  || ||||  ||||| ||||||||||||||    
T  51251235 tttttaaaaccatatccacccaatcacccaacccaacccacttttttgggtttttttgggtgggtttgatgggtttttttgggtttacccaacccatgta 51251334  T
Q  299 cacccctaa 307  Q
    |||||||||    
T  51251335 cacccctaa 51251343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 306
Target Start/End: Original strand, 31200556 - 31200662
Alignment:
Q  199 tttttaaaaccacattcacccatttacccgacccaacccgnnnnnnnggttttctttgggtgggtttgaccgggttttccgggttgacccaacccatgta 298  Q
    |||||||||||| || |||||| | |||| |||||||||        || ||| |||||||||||||||| || ||||  ||||| ||||||||||||||    
T  31200556 tttttaaaaccatatccacccaatcacccaacccaacccacttttttgggtttttttgggtgggtttgacaggtttttt-gggtttacccaacccatgta 31200654  T
Q  299 caccccta 306  Q
    ||||||||    
T  31200655 caccccta 31200662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 14939518 - 14939465
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    ||||||||||||||| ||| |||||  ||||||||||||||||  |||||||||    
T  14939518 tttgggtgggtttgatcggattttctaggttgacccaacccataaacaccccta 14939465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 14944762 - 14944709
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    ||||||||||||||| ||| |||||  ||||||||||||||||  |||||||||    
T  14944762 tttgggtgggtttgatcggattttctaggttgacccaacccataaacaccccta 14944709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 306
Target Start/End: Original strand, 28882494 - 28882547
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    |||||||||||||||||| |||| | ||||||| ||||| |||| |||||||||    
T  28882494 tttgggtgggtttgaccgcgtttgctgggttgatccaacacatgaacaccccta 28882547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 306
Target Start/End: Original strand, 40484960 - 40485012
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    |||||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  40484960 tttgggtgggtttgac-gggttttttgggttgacccaacccatgtacaccccta 40485012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 4421846 - 4421896
Alignment:
Q  257 ggtgggtttgaccgggttttccgggttgacccaacccatgtacacccctaa 307  Q
    ||||||||||||||| ||||| | |||||||||||||||| ||||||||||    
T  4421846 ggtgggtttgaccggattttctgagttgacccaacccatgaacacccctaa 4421896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 306
Target Start/End: Original strand, 14634728 - 14634765
Alignment:
Q  269 cgggttttccgggttgacccaacccatgtacaccccta 306  Q
    |||||||| | |||||||||||||||||||||||||||    
T  14634728 cgggtttttcaggttgacccaacccatgtacaccccta 14634765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 23927875 - 23927823
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    |||||||||||||||| |||||||  || || ||||||||||||||||||||||    
T  23927875 tttgggtgggtttgac-gggttttttggatttacccaacccatgtacaccccta 23927823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 34490685 - 34490640
Alignment:
Q  257 ggtgggtttgaccgggttttccgggttgacccaacccatgtacacc 302  Q
    |||||||||||| |||||| |||||||||||||||| ||| |||||    
T  34490685 ggtgggtttgactgggtttaccgggttgacccaacctatgcacacc 34490640  T

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Target: chr6 (Bit Score: 37; Significance: 0.000000000007; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 24495795 - 24495743
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacacccct 305  Q
    ||||||||||||||||| ||||||| |||| ||||||||||||| ||||||||    
T  24495795 tttgggtgggtttgaccaggttttctgggtcgacccaacccatgaacacccct 24495743  T

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Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 306
Target Start/End: Original strand, 8770545 - 8770651
Alignment:
Q  199 tttttaaaaccacattcacccatttacccgacccaacccgnnnnnnnggttttctttgggtgggtttgaccgggttttccgggttgacccaacccatgta 298  Q
    |||||||||||| || |||||| | |||| |||||||||        || ||| |||||||||||||||| |||||||  ||||| ||||||||||||||    
T  8770545 tttttaaaaccatatccacccaatcacccaacccaacccacttttttgggtttttttgggtgggtttgac-gggttttttgggtttacccaacccatgta 8770643  T
Q  299 caccccta 306  Q
    ||||||||    
T  8770644 caccccta 8770651  T

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Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 257 - 306
Target Start/End: Original strand, 9606518 - 9606567
Alignment:
Q  257 ggtgggtttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    |||||||||||||| ||||||  ||||||||||||||||| |||||||||    
T  9606518 ggtgggtttgaccgagttttctaggttgacccaacccatgaacaccccta 9606567  T

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Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 35165971 - 35166025
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacacccctaa 307  Q
    ||||||||||||||| ||||||||  |||||||||||||| ||| |||| |||||    
T  35165971 tttgggtgggtttgatcgggttttttgggttgacccaaccaatgaacacacctaa 35166025  T

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Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 306
Target Start/End: Original strand, 4151466 - 4151519
Alignment:
Q  253 tttgggtgggtttgaccgggttttccgggttgacccaacccatgtacaccccta 306  Q
    ||||| ||||||| || || ||||  ||||||||||||||||||||||||||||    
T  4151466 tttggatgggttttacgggattttttgggttgacccaacccatgtacaccccta 4151519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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