View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17515_low_25 (Length: 313)

Name: NF17515_low_25
Description: NF17515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17515_low_25
NF17515_low_25
[»] chr4 (53 HSPs)
chr4 (7-296)||(1232604-1232893)
chr4 (143-247)||(45011893-45011997)
chr4 (56-98)||(241406-241448)
chr4 (56-98)||(9913896-9913938)
chr4 (56-98)||(35287529-35287571)
chr4 (56-98)||(9946424-9946466)
chr4 (58-103)||(24995780-24995825)
chr4 (53-98)||(32923252-32923297)
chr4 (64-97)||(36059033-36059066)
chr4 (62-98)||(3936630-3936666)
chr4 (51-99)||(7282549-7282597)
chr4 (62-106)||(29681471-29681515)
chr4 (129-236)||(35065067-35065175)
chr4 (59-98)||(10204840-10204879)
chr4 (51-98)||(10303533-10303580)
chr4 (51-98)||(11198756-11198803)
chr4 (51-98)||(32430145-32430192)
chr4 (56-98)||(2186355-2186397)
chr4 (56-98)||(9539215-9539257)
chr4 (56-98)||(10401418-10401460)
chr4 (56-98)||(15849231-15849273)
chr4 (56-98)||(16304120-16304162)
chr4 (64-98)||(16431621-16431655)
chr4 (56-98)||(19588151-19588193)
chr4 (64-98)||(30305983-30306017)
chr4 (56-98)||(32180827-32180869)
chr4 (56-98)||(39171392-39171434)
chr4 (64-98)||(42198598-42198632)
chr4 (56-98)||(43374294-43374336)
chr4 (56-98)||(52270052-52270094)
chr4 (56-98)||(53468593-53468635)
chr4 (56-98)||(54857637-54857679)
chr4 (49-98)||(7230270-7230319)
chr4 (57-98)||(10497257-10497298)
chr4 (62-91)||(22474695-22474724)
chr4 (53-98)||(31352106-31352151)
chr4 (62-111)||(31780748-31780797)
chr4 (132-224)||(33347155-33347248)
chr4 (57-98)||(37463520-37463561)
chr4 (57-98)||(40070990-40071031)
chr4 (57-98)||(47537468-47537509)
chr4 (53-98)||(50380858-50380903)
chr4 (62-98)||(9221961-9221997)
chr4 (62-98)||(11949785-11949821)
chr4 (54-98)||(14197453-14197497)
chr4 (62-98)||(19854568-19854604)
chr4 (62-98)||(20383491-20383527)
chr4 (62-98)||(30780132-30780168)
chr4 (62-98)||(31604315-31604351)
chr4 (144-207)||(33456394-33456455)
chr4 (50-98)||(35021489-35021537)
chr4 (62-98)||(50152366-50152402)
chr4 (62-98)||(51458681-51458717)
[»] chr5 (49 HSPs)
chr5 (129-247)||(42858112-42858231)
chr5 (56-98)||(22619871-22619913)
chr5 (51-98)||(26034630-26034677)
chr5 (51-98)||(29178439-29178486)
chr5 (51-98)||(42505864-42505911)
chr5 (64-102)||(10359615-10359653)
chr5 (56-98)||(28207129-28207171)
chr5 (166-224)||(34443017-34443075)
chr5 (51-105)||(39610356-39610410)
chr5 (49-98)||(10199009-10199058)
chr5 (52-93)||(32283572-32283613)
chr5 (132-207)||(6951307-6951383)
chr5 (62-98)||(10704353-10704389)
chr5 (52-92)||(31591565-31591605)
chr5 (61-92)||(26647974-26648005)
chr5 (61-92)||(26919559-26919590)
chr5 (143-210)||(28110437-28110504)
chr5 (56-107)||(32858667-32858718)
chr5 (51-98)||(37932322-37932369)
chr5 (56-106)||(5485183-5485233)
chr5 (56-98)||(8410467-8410509)
chr5 (56-98)||(11637594-11637636)
chr5 (56-98)||(14880409-14880451)
chr5 (53-107)||(16133078-16133132)
chr5 (56-98)||(16193104-16193146)
chr5 (56-98)||(18589889-18589931)
chr5 (51-105)||(19248471-19248525)
chr5 (52-98)||(22665225-22665271)
chr5 (56-98)||(27721697-27721739)
chr5 (64-98)||(31602847-31602881)
chr5 (56-98)||(39980505-39980547)
chr5 (62-95)||(1488367-1488400)
chr5 (49-98)||(1808615-1808664)
chr5 (56-93)||(12165235-12165272)
chr5 (65-98)||(12909188-12909221)
chr5 (56-93)||(16089447-16089484)
chr5 (53-98)||(27903107-27903152)
chr5 (53-93)||(4573086-4573126)
chr5 (62-98)||(5551303-5551339)
chr5 (62-98)||(6234822-6234858)
chr5 (62-98)||(12265917-12265953)
chr5 (54-98)||(13864339-13864383)
chr5 (54-98)||(17046329-17046373)
chr5 (62-98)||(18331710-18331746)
chr5 (62-98)||(18391603-18391639)
chr5 (62-98)||(26223347-26223383)
chr5 (62-98)||(26409256-26409292)
chr5 (50-98)||(31708168-31708216)
chr5 (66-98)||(41633639-41633671)
[»] chr7 (46 HSPs)
chr7 (56-106)||(46207757-46207807)
chr7 (51-103)||(47589570-47589622)
chr7 (62-98)||(13955483-13955519)
chr7 (50-98)||(19416505-19416553)
chr7 (51-98)||(27993051-27993098)
chr7 (52-98)||(44770165-44770211)
chr7 (53-98)||(18505679-18505724)
chr7 (144-224)||(22195884-22195964)
chr7 (58-98)||(26471215-26471255)
chr7 (58-98)||(26547655-26547695)
chr7 (52-92)||(27068185-27068225)
chr7 (52-92)||(27210088-27210128)
chr7 (62-98)||(36341087-36341123)
chr7 (160-232)||(42816445-42816517)
chr7 (51-103)||(48980479-48980531)
chr7 (56-95)||(38728205-38728244)
chr7 (62-93)||(45051700-45051731)
chr7 (51-98)||(47342669-47342716)
chr7 (51-98)||(48069859-48069906)
chr7 (56-98)||(580948-580990)
chr7 (58-88)||(2512305-2512335)
chr7 (56-98)||(5526722-5526764)
chr7 (64-98)||(9522917-9522951)
chr7 (56-98)||(10244724-10244766)
chr7 (56-98)||(10326951-10326993)
chr7 (55-93)||(20131840-20131878)
chr7 (56-98)||(20205819-20205861)
chr7 (56-98)||(21993179-21993221)
chr7 (56-98)||(23198771-23198813)
chr7 (56-98)||(39801703-39801745)
chr7 (57-98)||(7670432-7670473)
chr7 (57-98)||(7908591-7908632)
chr7 (53-98)||(10555365-10555410)
chr7 (53-94)||(11373666-11373707)
chr7 (57-98)||(13044164-13044205)
chr7 (56-89)||(14786120-14786153)
chr7 (56-93)||(20243252-20243289)
chr7 (62-99)||(42043087-42043124)
chr7 (56-105)||(47677592-47677641)
chr7 (62-98)||(2450583-2450619)
chr7 (54-98)||(5458093-5458137)
chr7 (66-98)||(6528827-6528859)
chr7 (62-98)||(24656973-24657009)
chr7 (56-92)||(31038550-31038586)
chr7 (54-98)||(31885967-31886011)
chr7 (62-98)||(38841990-38842026)
[»] chr3 (41 HSPs)
chr3 (56-98)||(52575944-52575986)
chr3 (51-98)||(14827517-14827564)
chr3 (56-110)||(43490427-43490481)
chr3 (51-98)||(3176995-3177042)
chr3 (58-97)||(53705650-53705689)
chr3 (56-98)||(21506780-21506822)
chr3 (56-98)||(22722399-22722441)
chr3 (56-98)||(25340946-25340988)
chr3 (56-98)||(28244126-28244168)
chr3 (56-98)||(44579633-44579675)
chr3 (53-98)||(8831367-8831412)
chr3 (57-98)||(32836171-32836212)
chr3 (58-98)||(977963-978003)
chr3 (62-98)||(32629083-32629119)
chr3 (57-93)||(43329247-43329283)
chr3 (56-107)||(10498708-10498759)
chr3 (51-98)||(10926461-10926508)
chr3 (47-98)||(54018428-54018479)
chr3 (56-98)||(7868719-7868761)
chr3 (64-98)||(10840423-10840457)
chr3 (56-98)||(20370303-20370345)
chr3 (56-98)||(28150743-28150785)
chr3 (56-98)||(32843284-32843326)
chr3 (56-94)||(39481138-39481176)
chr3 (55-93)||(47313399-47313437)
chr3 (52-98)||(49710713-49710759)
chr3 (57-98)||(5941316-5941357)
chr3 (57-98)||(7938722-7938763)
chr3 (57-98)||(8942015-8942056)
chr3 (53-98)||(32909323-32909368)
chr3 (56-93)||(47040921-47040958)
chr3 (62-98)||(13800670-13800706)
chr3 (62-98)||(24428495-24428531)
chr3 (62-98)||(29631189-29631225)
chr3 (58-98)||(35492792-35492832)
chr3 (62-98)||(41737799-41737835)
chr3 (62-98)||(44968180-44968216)
chr3 (62-102)||(46469280-46469320)
chr3 (62-98)||(47471612-47471648)
chr3 (57-93)||(50037309-50037345)
chr3 (62-98)||(53996302-53996338)
[»] chr8 (34 HSPs)
chr8 (132-207)||(38868505-38868581)
chr8 (160-224)||(40769352-40769416)
chr8 (51-98)||(26885660-26885707)
chr8 (56-98)||(8137932-8137974)
chr8 (56-98)||(14975885-14975927)
chr8 (57-98)||(1644695-1644736)
chr8 (53-98)||(28580938-28580983)
chr8 (47-108)||(33451361-33451422)
chr8 (50-98)||(33445561-33445609)
chr8 (57-93)||(35103104-35103140)
chr8 (51-98)||(8020302-8020349)
chr8 (51-98)||(20469333-20469380)
chr8 (51-98)||(29499763-29499810)
chr8 (51-98)||(39433402-39433449)
chr8 (132-197)||(4662915-4662981)
chr8 (145-207)||(13384656-13384718)
chr8 (141-207)||(26100148-26100214)
chr8 (56-102)||(37117542-37117588)
chr8 (60-98)||(44037387-44037425)
chr8 (52-93)||(9855047-9855088)
chr8 (57-98)||(13004163-13004204)
chr8 (53-106)||(13394165-13394218)
chr8 (56-93)||(19163563-19163600)
chr8 (57-98)||(26799182-26799223)
chr8 (132-236)||(32927899-32928004)
chr8 (53-98)||(37750021-37750066)
chr8 (57-98)||(37872975-37873016)
chr8 (57-98)||(40919381-40919422)
chr8 (53-98)||(41625188-41625233)
chr8 (53-93)||(2958419-2958459)
chr8 (62-98)||(9656019-9656055)
chr8 (62-98)||(30427734-30427770)
chr8 (62-98)||(30694461-30694497)
chr8 (62-98)||(32878664-32878700)
[»] chr1 (57 HSPs)
chr1 (141-296)||(30557521-30557674)
chr1 (51-95)||(39452452-39452496)
chr1 (56-98)||(2613719-2613761)
chr1 (56-98)||(5503787-5503829)
chr1 (48-98)||(35308174-35308224)
chr1 (52-98)||(45701321-45701367)
chr1 (56-98)||(48681955-48681997)
chr1 (54-95)||(15892792-15892833)
chr1 (57-98)||(50595905-50595946)
chr1 (132-207)||(11049257-11049333)
chr1 (62-98)||(14520947-14520983)
chr1 (62-98)||(17188690-17188726)
chr1 (62-98)||(25086486-25086522)
chr1 (62-98)||(40227832-40227868)
chr1 (62-98)||(42888578-42888614)
chr1 (62-98)||(48100725-48100761)
chr1 (62-98)||(52262188-52262224)
chr1 (130-236)||(7524118-7524225)
chr1 (51-98)||(13590102-13590149)
chr1 (51-94)||(20481092-20481135)
chr1 (51-98)||(26834512-26834559)
chr1 (51-98)||(28832193-28832240)
chr1 (51-102)||(35442847-35442898)
chr1 (51-98)||(39387813-39387860)
chr1 (51-98)||(41032923-41032970)
chr1 (141-208)||(50569644-50569711)
chr1 (60-98)||(124466-124504)
chr1 (56-98)||(13673542-13673584)
chr1 (56-98)||(16826351-16826393)
chr1 (56-102)||(17139535-17139581)
chr1 (51-93)||(24752675-24752717)
chr1 (56-106)||(26086926-26086976)
chr1 (56-98)||(27853352-27853394)
chr1 (56-98)||(29739334-29739376)
chr1 (52-98)||(32962556-32962602)
chr1 (56-98)||(40735027-40735069)
chr1 (56-98)||(42045394-42045436)
chr1 (52-93)||(2636782-2636823)
chr1 (53-98)||(3509963-3510008)
chr1 (57-98)||(7550894-7550935)
chr1 (56-93)||(17339212-17339249)
chr1 (62-95)||(17605421-17605454)
chr1 (53-98)||(21041338-21041383)
chr1 (57-98)||(26498059-26498100)
chr1 (51-92)||(27526783-27526824)
chr1 (52-93)||(29451009-29451050)
chr1 (53-98)||(30895328-30895373)
chr1 (160-237)||(34721812-34721889)
chr1 (56-105)||(52043270-52043319)
chr1 (62-98)||(14390-14426)
chr1 (51-91)||(6423791-6423831)
chr1 (51-95)||(6567702-6567746)
chr1 (62-98)||(8253742-8253778)
chr1 (62-98)||(11410630-11410666)
chr1 (62-98)||(21015965-21016001)
chr1 (62-98)||(23203325-23203361)
chr1 (62-98)||(45140028-45140064)
[»] chr6 (28 HSPs)
chr6 (132-246)||(4910915-4911030)
chr6 (54-98)||(33938701-33938745)
chr6 (52-98)||(2108718-2108764)
chr6 (56-98)||(4494893-4494935)
chr6 (56-98)||(9444954-9444996)
chr6 (160-246)||(25195329-25195415)
chr6 (53-98)||(9581960-9582005)
chr6 (56-93)||(14036306-14036343)
chr6 (53-98)||(24269877-24269922)
chr6 (57-98)||(26320585-26320626)
chr6 (51-98)||(9111039-9111086)
chr6 (51-98)||(12333590-12333637)
chr6 (59-98)||(32149138-32149177)
chr6 (51-98)||(32193881-32193928)
chr6 (56-98)||(2445296-2445338)
chr6 (56-98)||(20744135-20744177)
chr6 (56-98)||(28951396-28951438)
chr6 (56-98)||(32053785-32053827)
chr6 (166-247)||(3482088-3482169)
chr6 (132-236)||(5724603-5724708)
chr6 (57-98)||(7989212-7989253)
chr6 (53-98)||(9372377-9372422)
chr6 (57-98)||(16130763-16130804)
chr6 (58-98)||(12276253-12276293)
chr6 (62-98)||(12329279-12329315)
chr6 (62-98)||(12700443-12700479)
chr6 (147-207)||(17225875-17225935)
chr6 (62-98)||(24827055-24827091)
[»] chr2 (40 HSPs)
chr2 (56-98)||(17736790-17736832)
chr2 (56-98)||(29133506-29133548)
chr2 (59-98)||(6765610-6765649)
chr2 (51-98)||(42714431-42714478)
chr2 (56-98)||(7350543-7350585)
chr2 (56-98)||(40365428-40365470)
chr2 (60-98)||(41668656-41668694)
chr2 (65-98)||(16221368-16221401)
chr2 (52-92)||(30956422-30956462)
chr2 (51-98)||(3752797-3752844)
chr2 (144-207)||(8800700-8800763)
chr2 (51-98)||(9517031-9517078)
chr2 (56-99)||(29798538-29798581)
chr2 (51-98)||(37984347-37984394)
chr2 (51-98)||(42475132-42475179)
chr2 (51-93)||(6471258-6471300)
chr2 (56-98)||(7201504-7201546)
chr2 (56-98)||(9383231-9383273)
chr2 (56-98)||(9842224-9842266)
chr2 (56-98)||(10109668-10109710)
chr2 (52-98)||(19189766-19189812)
chr2 (56-98)||(23984001-23984043)
chr2 (52-98)||(25562019-25562065)
chr2 (145-207)||(32596012-32596074)
chr2 (145-247)||(33019118-33019220)
chr2 (56-98)||(35404577-35404619)
chr2 (56-98)||(41187479-41187521)
chr2 (160-197)||(3352112-3352149)
chr2 (56-93)||(19967415-19967452)
chr2 (52-93)||(19976146-19976187)
chr2 (53-98)||(32167820-32167865)
chr2 (56-93)||(44526125-44526162)
chr2 (166-238)||(10126126-10126198)
chr2 (54-98)||(20565097-20565141)
chr2 (54-98)||(25598584-25598628)
chr2 (62-98)||(27314870-27314906)
chr2 (62-98)||(31582189-31582225)
chr2 (54-98)||(37133002-37133046)
chr2 (54-98)||(41672306-41672350)
chr2 (166-210)||(45066484-45066528)
[»] scaffold0154 (1 HSPs)
scaffold0154 (53-98)||(37529-37574)
[»] scaffold0031 (1 HSPs)
scaffold0031 (51-98)||(47263-47310)
[»] scaffold0012 (1 HSPs)
scaffold0012 (51-98)||(118811-118858)
[»] scaffold0011 (2 HSPs)
scaffold0011 (51-98)||(185255-185302)
scaffold0011 (56-98)||(223155-223197)
[»] scaffold0197 (1 HSPs)
scaffold0197 (52-98)||(21777-21823)
[»] scaffold0062 (1 HSPs)
scaffold0062 (53-98)||(7468-7513)
[»] scaffold0016 (1 HSPs)
scaffold0016 (49-98)||(204580-204629)
[»] scaffold0735 (1 HSPs)
scaffold0735 (62-98)||(1531-1567)
[»] scaffold0460 (1 HSPs)
scaffold0460 (51-98)||(1245-1292)
[»] scaffold0198 (1 HSPs)
scaffold0198 (51-98)||(19232-19278)
[»] scaffold0118 (1 HSPs)
scaffold0118 (56-98)||(39995-40037)
[»] scaffold0098 (1 HSPs)
scaffold0098 (56-98)||(5422-5464)
[»] scaffold0006 (1 HSPs)
scaffold0006 (56-98)||(171156-171198)
[»] scaffold0122 (1 HSPs)
scaffold0122 (53-98)||(14208-14253)
[»] scaffold0458 (1 HSPs)
scaffold0458 (51-95)||(11177-11221)
[»] scaffold0180 (1 HSPs)
scaffold0180 (53-93)||(17726-17766)
[»] scaffold0135 (1 HSPs)
scaffold0135 (62-98)||(32614-32650)
[»] scaffold0072 (1 HSPs)
scaffold0072 (62-98)||(25698-25734)
[»] scaffold0021 (1 HSPs)
scaffold0021 (62-98)||(161144-161180)


Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 7 - 296
Target Start/End: Complemental strand, 1232893 - 1232604
Alignment:
Q  7 aattgattatgaaggcgggttattgatcccaacatggttggttgttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatattcaatgtc 106  Q
    |||||||| ||||||||||||||||||||||||||  ||||||||||| || |||||||||| ||| |||||||| |||||||||||||||||||| |||    
T  1232893 aattgattttgaaggcgggttattgatcccaacatatttggttgttgtccttgtaagcttagttcaattggtatggacaatgcataaaatattcaaggtc 1232794  T
Q  107 aaaatcctacatccagagtttcttttacttgaagtaggatttgtaactattgtttctataattgattttcacatacaaatttatatttcaattcaatttt 206  Q
    ||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  1232793 aaaatcctacatccagaattccttttacttgaagtaggatttataactattgtttctataattgaatttcacatgcaaatttatatttcaattcaatttt 1232694  T
Q  207 atattattgtattcaaacgcatatcacttttagttagaatccatttcaattaaaatcaatcttacatactcaattttatcaaaatcaatt 296  Q
    |||||||||||||||||| ||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||| ||||    
T  1232693 atattattgtattcaaacccatatcacttttagttataatcaattttaattaaaatcaatcttacatactcaattttatcaaaataaatt 1232604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 247
Target Start/End: Original strand, 45011893 - 45011997
Alignment:
Q  143 ggatttgtaactattgtttctataattgattttcacatacaaatttatatttcaattcaattttatattattgtattcaaacgcatatcacttttagtta 242  Q
    ||||||||| || ||| ||||| |||||||||||||| ||||||||||| ||  | ||| |||||||| | ||||||||||| || | |||||||||| |    
T  45011893 ggatttgtagcttttgattctagaattgattttcacacacaaatttataattttactcacttttatatgaatgtattcaaacccaaaccacttttagtga 45011992  T
Q  243 gaatc 247  Q
    |||||    
T  45011993 gaatc 45011997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 241448 - 241406
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  241448 ctcgtaagcttagctcggttggtatgaacaatgcataaaatat 241406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 9913896 - 9913938
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  9913896 ctcgtgagcttagctcagttggtatgaacaatgcataaaatat 9913938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 35287571 - 35287529
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  35287571 ctcgtgagcttagctcagttggtatgaacaatgcataaaatat 35287529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 9946424 - 9946466
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||||| ||||||||||||||||    
T  9946424 ctcgtgagcttagctcagttggtatggacaatgcataaaatat 9946466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 24995780 - 24995825
Alignment:
Q  58 cgtaagcttagctcagttggtatgaacaatgcataaaatattcaat 103  Q
    |||||||||||||||||||||||||| ||||||||| |||| ||||    
T  24995780 cgtaagcttagctcagttggtatgaataatgcataatatatccaat 24995825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 32923297 - 32923252
Alignment:
Q  53 gttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||| |||||| ||||||||||||||||||||||||| ||||    
T  32923297 gttctcgtgagcttaactcagttggtatgaacaatgcataatatat 32923252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 97
Target Start/End: Original strand, 36059033 - 36059066
Alignment:
Q  64 cttagctcagttggtatgaacaatgcataaaata 97  Q
    ||||||||||||||||||||||||||||||||||    
T  36059033 cttagctcagttggtatgaacaatgcataaaata 36059066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 3936630 - 3936666
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||||||||||||||| ||||    
T  3936630 agcttagctcagttggtatgaacaatgcataatatat 3936666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 7282549 - 7282597
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatatt 99  Q
    ||||||| || | |||||||||||||||||||||||||||||| |||||    
T  7282549 ttgttcttgtgaacttagctcagttggtatgaacaatgcataatatatt 7282597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 29681515 - 29681471
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatattcaatgtc 106  Q
    ||||||| |||||||||||| |||||||||||||||| |||||||    
T  29681515 agcttagttcagttggtatggacaatgcataaaatatgcaatgtc 29681471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 236
Target Start/End: Original strand, 35065067 - 35065175
Alignment:
Q  129 ttttacttgaag-taggatttgtaactattgtttctataattgattttcacatacaaatttatatttcaattcaattttatattattgtattcaaacgca 227  Q
    |||||||||||| ||| |||||| ||| ||| ||||| |||||||||| ||| |||||||||||| || | ||| ||||| || | ||||| ||||| ||    
T  35065067 ttttacttgaagctagtatttgtgacttttgattctagaattgatttttacacacaaatttatatctccactcacttttacatgaatgtatccaaacaca 35065166  T
Q  228 tatcacttt 236  Q
     ||||||||    
T  35065167 aatcacttt 35065175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 98
Target Start/End: Original strand, 10204840 - 10204879
Alignment:
Q  59 gtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||||||||||||||||||| ||||||||||| ||||    
T  10204840 gtaagcttagctcagttggtatggacaatgcataatatat 10204879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 10303580 - 10303533
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| ||||| |||||||||||||||||| | ||||||||||||||||    
T  10303580 ttgtcctcgtgagcttagctcagttggtaaggacaatgcataaaatat 10303533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 11198756 - 11198803
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| ||||| |||||||||||||||||||| | ||||||||||||||    
T  11198756 ttgtcctcgtgagcttagctcagttggtatggagaatgcataaaatat 11198803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 32430192 - 32430145
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| ||||| |||||| ||||||| ||||||||||||||||||||||    
T  32430192 ttgtcctcgtgagcttaactcagttagtatgaacaatgcataaaatat 32430145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 2186397 - 2186355
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||||| ||||||||||| ||||    
T  2186397 ctcgtgagcttagctcagttggtatggacaatgcataatatat 2186355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 9539257 - 9539215
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||    
T  9539257 ctcgtgagcttagctcagttgttatggacaatgcataaaatat 9539215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 10401460 - 10401418
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| ||||||| ||||||||||||||||||||||| |||||    
T  10401460 ctcgtgagcttagttcagttggtatgaacaatgcatacaatat 10401418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 15849231 - 15849273
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||||| | ||||||||||||||    
T  15849231 ctcgtgagcttagctcagttggtatggataatgcataaaatat 15849273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 16304162 - 16304120
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||| ||||||||||||||||| ||||||||||| ||||    
T  16304162 ctcgtaagtttagctcagttggtatggacaatgcataatatat 16304120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 16431621 - 16431655
Alignment:
Q  64 cttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||| ||||||||||||||||    
T  16431621 cttagctcagttggtatggacaatgcataaaatat 16431655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 19588151 - 19588193
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| ||||||||||| |||||||| ||||||||||||||||    
T  19588151 ctcgtgagcttagctcaattggtatggacaatgcataaaatat 19588193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 30305983 - 30306017
Alignment:
Q  64 cttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||||||||||||||    
T  30305983 cttagttcagttggtatgaacaatgcataaaatat 30306017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 32180827 - 32180869
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||||  ||||||||||||||||    
T  32180827 ctcgtgagcttagctcagttggtatagacaatgcataaaatat 32180869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 39171434 - 39171392
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||    
T  39171434 ctcgtgagcttagctcagttgatatggacaatgcataaaatat 39171392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 42198632 - 42198598
Alignment:
Q  64 cttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||||||||||||| |||||||||||||||||    
T  42198632 cttagctcagttggtataaacaatgcataaaatat 42198598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 43374336 - 43374294
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||    
T  43374336 ctcgtgagcttagctcagttgatatggacaatgcataaaatat 43374294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 52270094 - 52270052
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||||| ||||||||||| ||||    
T  52270094 ctcgtgagcttagctcagttggtatggacaatgcataatatat 52270052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 53468635 - 53468593
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| ||| ||||||| |||||||||||||||||||||||||    
T  53468635 ctcgtgagcatagctcaattggtatgaacaatgcataaaatat 53468593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 54857679 - 54857637
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||| |||||||| |||||||||||||||||    
T  54857679 ctcgtgagcttagctcggttggtataaacaatgcataaaatat 54857637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 7230270 - 7230319
Alignment:
Q  49 tgttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||| ||||| |||||||||||||||||| | ||||||||||| ||||    
T  7230270 tgttgtcctcgtgagcttagctcagttggtaaggacaatgcataatatat 7230319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 10497257 - 10497298
Alignment:
Q  57 tcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| ||||||||||| |||||||| ||||||||||||||||    
T  10497257 tcgtgagcttagctcaattggtatggacaatgcataaaatat 10497298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 91
Target Start/End: Complemental strand, 22474724 - 22474695
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcat 91  Q
    ||||||||||||||||||||||||||||||    
T  22474724 agcttagctcagttggtatgaacaatgcat 22474695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 31352106 - 31352151
Alignment:
Q  53 gttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||| | ||||||| |||||||||| ||||||||||||||||    
T  31352106 gttctcgtgaacttagctaagttggtatggacaatgcataaaatat 31352151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 31780748 - 31780797
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatattcaatgtcaaaat 111  Q
    |||||||||||||||||| | |||||||||||||||| ||| ||| ||||    
T  31780748 agcttagctcagttggtaaggacaatgcataaaatatgcaaggtccaaat 31780797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 224
Target Start/End: Complemental strand, 33347248 - 33347155
Alignment:
Q  132 tacttgaag-taggatttgtaactattgtttctataattgattttcacatacaaatttatatttcaattcaattttatattattgtattcaaac 224  Q
    ||||||||| |||||||||||| | ||  ||| |||||| |||||  || |||||| |||| ||||||||| ||||| || |||||||||||||    
T  33347248 tacttgaaggtaggatttgtaattttttattcgataattaatttttgcacacaaatatatagttcaattcacttttacatgattgtattcaaac 33347155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 37463520 - 37463561
Alignment:
Q  57 tcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| |||||||||| ||||||||||||||||||||| ||||    
T  37463520 tcgtgagcttagctcggttggtatgaacaatgcataatatat 37463561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 40071031 - 40070990
Alignment:
Q  57 tcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| |||||| ||||||||||||||||||||||||| ||||    
T  40071031 tcgtgagcttaactcagttggtatgaacaatgcataatatat 40070990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 47537509 - 47537468
Alignment:
Q  57 tcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||| |||| |||||||||||| |||||||||||||||||    
T  47537509 tcgtaaacttaactcagttggtataaacaatgcataaaatat 47537468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 50380903 - 50380858
Alignment:
Q  53 gttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||| ||||||  |||||||||||||||||||||||| ||||    
T  50380903 gttctcgtgagcttaattcagttggtatgaacaatgcataatatat 50380858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 9221961 - 9221997
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  9221961 agcttagctcagttggtttgaacaatgcataatatat 9221997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 11949821 - 11949785
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  11949821 agcttagctcagttggtatggacaatgcataatatat 11949785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 14197497 - 14197453
Alignment:
Q  54 ttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||| ||||||||||| | ||||||||||| ||||    
T  14197497 ttctcgtaagcttaactcagttggtagggacaatgcataatatat 14197453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 19854568 - 19854604
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  19854568 agcttagctcagttggtatggacaatgcataatatat 19854604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 20383491 - 20383527
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  20383491 agcttagctcagttggtatggacaatgcataatatat 20383527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 30780132 - 30780168
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  30780132 agcttaactcagttggtatggacaatgcataaaatat 30780168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 31604351 - 31604315
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  31604351 agcttaactcagttggtaagaacaatgcataaaatat 31604315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 33456394 - 33456455
Alignment:
Q  144 gatttgtaactattgtttctataattgattttcacatacaaatttatatttcaattcaatttta 207  Q
    |||||||| || ||| |||||||||||||||||||||  |||| |||| ||||||||| |||||    
T  33456394 gatttgtagcttttgattctataattgattttcacat--aaatctatagttcaattcactttta 33456455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 35021537 - 35021489
Alignment:
Q  50 gttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| ||||| ||||||||||||||| |||| ||||| ||||||||||    
T  35021537 gttgtcctcgtgagcttagctcagttgatatggacaatacataaaatat 35021489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 50152366 - 50152402
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  50152366 agcttagctcagatggtacgaacaatgcataaaatat 50152402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 51458681 - 51458717
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  51458681 agcttagctcagttggtatggacaatacataaaatat 51458717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 247
Target Start/End: Original strand, 42858112 - 42858231
Alignment:
Q  129 ttttacttgaagt-aggatttgtaactattgtttctataattgattttcacatacaaatttatatttcaattcaattttatattattgtattcaaacgca 227  Q
    ||||||||||||| |||||||| | || ||  |||||||||||||||||||| ||||||||||| ||||| ||| ||||| || | | ||||||||| ||    
T  42858112 ttttacttgaagttaggatttggagcttttaattctataattgattttcacacacaaatttatagttcaactcacttttacatgaatttattcaaacaca 42858211  T
Q  228 tatcacttttagttagaatc 247  Q
     |||||||||||| ||||||    
T  42858212 gatcacttttagtcagaatc 42858231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 22619871 - 22619913
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  22619871 ctcgtgagcttagctcagttggtatgaacaatgcataaaatat 22619913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 26034677 - 26034630
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||| |||||| ||||||||||||||||||||||||| ||||    
T  26034677 ttgttctcgtgagcttaactcagttggtatgaacaatgcataatatat 26034630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 29178439 - 29178486
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||    
T  29178439 ttgttctcgtgagcttaactcagttggtatggacaatgcataaaatat 29178486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 42505864 - 42505911
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| |||||||||||||||||||||||||| ||||||||||| ||||    
T  42505864 ttgtcctcgtaagcttagctcagttggtatggacaatgcataatatat 42505911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 102
Target Start/End: Complemental strand, 10359653 - 10359615
Alignment:
Q  64 cttagctcagttggtatgaacaatgcataaaatattcaa 102  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  10359653 cttagctcagttggtatgaacaatgcattaaatattcaa 10359615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 28207129 - 28207171
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||||| ||||||||||||||||    
T  28207129 ctcgtgagcttagctcagttggtatggacaatgcataaaatat 28207171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 224
Target Start/End: Original strand, 34443017 - 34443075
Alignment:
Q  166 aattgattttcacatacaaatttatatttcaattcaattttatattattgtattcaaac 224  Q
    |||||||||| ||| |||||||||| |||||||||| |||||||| | |||||||||||    
T  34443017 aattgattttaacaaacaaatttatttttcaattcacttttatataaatgtattcaaac 34443075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 105
Target Start/End: Complemental strand, 39610410 - 39610356
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatattcaatgt 105  Q
    |||||||||| ||||||||||||||| |||| ||||||||||| |||| ||||||    
T  39610410 ttgttctcgtgagcttagctcagttgatatggacaatgcataatatatgcaatgt 39610356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 10199009 - 10199058
Alignment:
Q  49 tgttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||| ||||| |||||||||||||||||||| ||||||||||| ||||    
T  10199009 tgttgtcctcgtgagcttagctcagttggtatggacaatgcataatatat 10199058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 32283572 - 32283613
Alignment:
Q  52 tgttctcgtaagcttagctcagttggtatgaacaatgcataa 93  Q
    ||||||||| |||||||||||||||||||| |||||||||||    
T  32283572 tgttctcgtgagcttagctcagttggtatggacaatgcataa 32283613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 6951383 - 6951307
Alignment:
Q  132 tacttgaagt-aggatttgtaactattgtttctataattgattttcacatacaaatttatatttcaattcaatttta 207  Q
    |||||||||| |||||||||| || ||| |||||||||||||||  ||| | ||||||||| ||||||||| |||||    
T  6951383 tacttgaagttaggatttgtagcttttgattctataattgatttgtacacataaatttataattcaattcactttta 6951307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 10704389 - 10704353
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||| ||||||||||||||||    
T  10704389 agcttagctcagttggtatggacaatgcataaaatat 10704353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 31591605 - 31591565
Alignment:
Q  52 tgttctcgtaagcttagctcagttggtatgaacaatgcata 92  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  31591605 tgttctcgtgagcttagctcagttggtaggaacaatgcata 31591565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 92
Target Start/End: Complemental strand, 26648005 - 26647974
Alignment:
Q  61 aagcttagctcagttggtatgaacaatgcata 92  Q
    ||||||||||||||||||||||||||||||||    
T  26648005 aagcttagctcagttggtatgaacaatgcata 26647974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 92
Target Start/End: Complemental strand, 26919590 - 26919559
Alignment:
Q  61 aagcttagctcagttggtatgaacaatgcata 92  Q
    ||||||||||||||||||||||||||||||||    
T  26919590 aagcttagctcagttggtatgaacaatgcata 26919559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 28110504 - 28110437
Alignment:
Q  143 ggatttgtaactattgtttctataattgattttcacatacaaatttatatttcaattcaattttatat 210  Q
    |||||||||||| ||| || || |||||||||||||| ||||||||||| || || ||| ||||||||    
T  28110504 ggatttgtaacttttgattttagaattgattttcacacacaaatttatagttgaactcacttttatat 28110437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 107
Target Start/End: Original strand, 32858667 - 32858718
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatattcaatgtca 107  Q
    ||||| |||||||||| ||||||||| |||||||||||||||| ||| ||||    
T  32858667 ctcgtgagcttagctccgttggtatggacaatgcataaaatatgcaaggtca 32858718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 37932322 - 37932369
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| ||||| |||||||||||||||||||| ||||||||||| ||||    
T  37932322 ttgtcctcgtgagcttagctcagttggtatggacaatgcataatatat 37932369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 5485183 - 5485233
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatattcaatgtc 106  Q
    ||||| |||||||||||||||||| | ||||||||||| |||| |||||||    
T  5485183 ctcgtgagcttagctcagttggtagggacaatgcataatatatgcaatgtc 5485233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 8410509 - 8410467
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||| || |||||||||||||||||||    
T  8410509 ctcgtgagcttagctcagttagtgtgaacaatgcataaaatat 8410467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 11637636 - 11637594
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||| ||||||||||||| ||||||||||||||||    
T  11637636 ctcgtgagcttaactcagttggtatggacaatgcataaaatat 11637594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 14880409 - 14880451
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||| |||||||||||||||||||||| |||||||    
T  14880409 ctcgtgagcttaactcagttggtatgaacaatgcagaaaatat 14880451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 107
Target Start/End: Complemental strand, 16133132 - 16133078
Alignment:
Q  53 gttctcgtaagcttagctcagttggtatgaacaatgcataaaatattcaatgtca 107  Q
    |||||||| |||||||||||||||||| | ||||||||||| |||| ||| ||||    
T  16133132 gttctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtca 16133078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 16193104 - 16193146
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| || |||| |||||||||||||||||||||||||||||    
T  16193104 ctcgtgagtttagttcagttggtatgaacaatgcataaaatat 16193146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 18589931 - 18589889
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||| ||||||||||||||||||||||||| ||||    
T  18589931 ctcgtgagcttaactcagttggtatgaacaatgcataatatat 18589889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 105
Target Start/End: Original strand, 19248471 - 19248525
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatattcaatgt 105  Q
    |||| ||||| |||||||||||||||||||  ||||||||||| |||| ||||||    
T  19248471 ttgtcctcgtgagcttagctcagttggtatagacaatgcataatatatgcaatgt 19248525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 22665271 - 22665225
Alignment:
Q  52 tgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||||| |||||||||||||| ||||| |||||| |||||||||    
T  22665271 tgttctcgtgagcttagctcagttagtatggacaatgtataaaatat 22665225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 27721739 - 27721697
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||    
T  27721739 ctcgtgagcttagctcagttggtaggaacaatgcataatatat 27721697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 31602881 - 31602847
Alignment:
Q  64 cttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||||||||||||| ||||    
T  31602881 cttagctcagttggtatgaacaatgcataatatat 31602847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 39980505 - 39980547
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||||| | ||||||||||||||    
T  39980505 ctcgtgagcttagctcagttggtatggataatgcataaaatat 39980547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 95
Target Start/End: Original strand, 1488367 - 1488400
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaa 95  Q
    |||||||||||||||||||| |||||||||||||    
T  1488367 agcttagctcagttggtatggacaatgcataaaa 1488400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 1808664 - 1808615
Alignment:
Q  49 tgttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||| ||||| | |||||||||||||||||| | ||||||||||||||    
T  1808664 tgttgtcctcgtgaacttagctcagttggtatggataatgcataaaatat 1808615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 12165235 - 12165272
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataa 93  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  12165235 ctcgtgagcttagctcaggtggtatgaacaatgcataa 12165272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 98
Target Start/End: Complemental strand, 12909221 - 12909188
Alignment:
Q  65 ttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||||||||||||||||||||||||| ||||    
T  12909221 ttagctcagttggtatgaacaatgcataatatat 12909188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 16089447 - 16089484
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataa 93  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  16089447 ctcgtaagcttagttcagttggtatggacaatgcataa 16089484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 27903107 - 27903152
Alignment:
Q  53 gttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||| || |||| |||||||||||||||||||||||| ||||    
T  27903107 gttctcgtgagtttagttcagttggtatgaacaatgcataatatat 27903152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 4573126 - 4573086
Alignment:
Q  53 gttctcgtaagcttagctcagttggtatgaacaatgcataa 93  Q
    |||||||| ||||||| |||||||||||| |||||||||||    
T  4573126 gttctcgtgagcttagttcagttggtatggacaatgcataa 4573086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 5551339 - 5551303
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||  ||||||||||||||||||    
T  5551339 agcttagctcagttggttggaacaatgcataaaatat 5551303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 6234858 - 6234822
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  6234858 agcttagctcagttagtatgaacaatgcataatatat 6234822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 12265917 - 12265953
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  12265917 agcttagttcagttggtatggacaatgcataaaatat 12265953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 13864339 - 13864383
Alignment:
Q  54 ttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||| |||||| ||||||||||||||||||| ||||| ||||    
T  13864339 ttctcgtgagcttaactcagttggtatgaacaatacataatatat 13864383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 17046329 - 17046373
Alignment:
Q  54 ttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||| |||||| ||||||||||||| ||||||||||| ||||    
T  17046329 ttctcgtgagcttaactcagttggtatggacaatgcataatatat 17046373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 18331710 - 18331746
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  18331710 agcttagctcacttggtatggacaatgcataaaatat 18331746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 18391603 - 18391639
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||| | ||||||||||||||||    
T  18391603 agcttagctcagttggtaaggacaatgcataaaatat 18391639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 26223383 - 26223347
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||  ||||||||||||||||    
T  26223383 agcttagctcagttggtattgacaatgcataaaatat 26223347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 26409256 - 26409292
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  26409256 agcttagctcagttggtatggacaatgcataatatat 26409292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 31708216 - 31708168
Alignment:
Q  50 gttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| ||||| ||| | |||||||||||||||||||||||||| ||||    
T  31708216 gttgtcctcgtgagcattgctcagttggtatgaacaatgcataatatat 31708168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 98
Target Start/End: Complemental strand, 41633671 - 41633639
Alignment:
Q  66 tagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||||| ||||||||||    
T  41633671 tagctcagttggtatgaacaatacataaaatat 41633639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 46207757 - 46207807
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatattcaatgtc 106  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  46207757 ctcgtgagcttagctcagttggtatgaacaatgcataaaatatgcaatgtc 46207807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 47589622 - 47589570
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatattcaat 103  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  47589622 ttgtcctcgtgagcttagctcagttggtatgaacaatgcataaaatatgcaat 47589570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 13955483 - 13955519
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||||||||||||||||||||    
T  13955483 agcttagctcagttggtatgaacaatgcataaaatat 13955519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 19416505 - 19416553
Alignment:
Q  50 gttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| ||||| |||||||||||||||||||| ||||||||||||||||    
T  19416505 gttgtcctcgtgagcttagctcagttggtatggacaatgcataaaatat 19416553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 27993098 - 27993051
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| ||||| |||||| ||||||||||||||||||||||||||||||    
T  27993098 ttgtcctcgtgagcttaactcagttggtatgaacaatgcataaaatat 27993051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 44770211 - 44770165
Alignment:
Q  52 tgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||||||| |||| ||||||||||||| ||||||||||||||||    
T  44770211 tgttctcgtaaacttaactcagttggtatggacaatgcataaaatat 44770165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 18505724 - 18505679
Alignment:
Q  53 gttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||| |||||||||||||||||| | ||||||||||||||||    
T  18505724 gttctcgtgagcttagctcagttggtagggacaatgcataaaatat 18505679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 22195884 - 22195964
Alignment:
Q  144 gatttgtaactattgtttctataattgattttcacatacaaatttatatttcaattcaattttatattattgtattcaaac 224  Q
    ||||||||||| ||| ||||| ||||||||||||||| || ||||||| || |||||| ||||| |||  ||||| |||||    
T  22195884 gatttgtaacttttgattctaaaattgattttcacatgcatatttatagtttaattcacttttacattcatgtatccaaac 22195964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 26471215 - 26471255
Alignment:
Q  58 cgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||||||| ||||| ||||||||||    
T  26471215 cgtaagcttagctcagttggtatggacaatacataaaatat 26471255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 26547655 - 26547695
Alignment:
Q  58 cgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||||||| ||||| ||||||||||    
T  26547655 cgtaagcttagctcagttggtatggacaatacataaaatat 26547695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 27068225 - 27068185
Alignment:
Q  52 tgttctcgtaagcttagctcagttggtatgaacaatgcata 92  Q
    |||||||||||||||||||||||||||||| | ||||||||    
T  27068225 tgttctcgtaagcttagctcagttggtatggataatgcata 27068185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 27210088 - 27210128
Alignment:
Q  52 tgttctcgtaagcttagctcagttggtatgaacaatgcata 92  Q
    |||||||||||||||||||||||||||||| | ||||||||    
T  27210088 tgttctcgtaagcttagctcagttggtatggataatgcata 27210128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 36341123 - 36341087
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||| ||||||||||||||||||||||||||||||    
T  36341123 agcttaactcagttggtatgaacaatgcataaaatat 36341087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 232
Target Start/End: Complemental strand, 42816517 - 42816445
Alignment:
Q  160 ttctataattgattttcacatacaaatttatatttcaattcaattttatattattgtattcaaacgcatatca 232  Q
    ||||| |||||||||||||| ||||||||||| ||||||||| || || || | ||||| ||||| |||||||    
T  42816517 ttctagaattgattttcacacacaaatttataattcaattcacttctacatgaatgtatgcaaacacatatca 42816445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 48980479 - 48980531
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatattcaat 103  Q
    |||| ||||| |||||||||||||||||||| ||||||||||| |||| ||||    
T  48980479 ttgtcctcgtgagcttagctcagttggtatggacaatgcataatatatacaat 48980531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 95
Target Start/End: Original strand, 38728205 - 38728244
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaa 95  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  38728205 ctcgtgagcttagctcagttggtatggacaatgcataaaa 38728244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 62 - 93
Target Start/End: Original strand, 45051700 - 45051731
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataa 93  Q
    ||||||||||||||||||||||||||||||||    
T  45051700 agcttagctcagttggtatgaacaatgcataa 45051731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 47342669 - 47342716
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| ||||| | |||||||||||||||||| ||||||||||||||||    
T  47342669 ttgtcctcgtgaacttagctcagttggtatggacaatgcataaaatat 47342716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 48069906 - 48069859
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||| |||||||||||||||  ||||||||||||||| ||||    
T  48069906 ttgttctcgtgagcttagctcagttgacatgaacaatgcataatatat 48069859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 580990 - 580948
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||| ||||||||| ||||||||||||||||    
T  580990 ctcgtgagcttagctcggttggtatggacaatgcataaaatat 580948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 88
Target Start/End: Original strand, 2512305 - 2512335
Alignment:
Q  58 cgtaagcttagctcagttggtatgaacaatg 88  Q
    |||||||||||||||||||||||||||||||    
T  2512305 cgtaagcttagctcagttggtatgaacaatg 2512335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 5526722 - 5526764
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||||| ||||||||||| ||||    
T  5526722 ctcgtgagcttagctcagttggtatggacaatgcataatatat 5526764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 9522917 - 9522951
Alignment:
Q  64 cttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||||||||||||| ||||    
T  9522917 cttagctcagttggtatgaacaatgcataatatat 9522951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 10244724 - 10244766
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||||| ||||||||||| ||||    
T  10244724 ctcgtgagcttagctcagttggtatggacaatgcataatatat 10244766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 10326951 - 10326993
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||| ||||||||||||||| |||||||||||||| ||||    
T  10326951 ctcgtaaacttagctcagttggtgtgaacaatgcataatatat 10326993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 93
Target Start/End: Original strand, 20131840 - 20131878
Alignment:
Q  55 tctcgtaagcttagctcagttggtatgaacaatgcataa 93  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  20131840 tctcgtgagcttagctcagttggcatgaacaatgcataa 20131878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 20205819 - 20205861
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||| ||||||||||||||||| ||||||||||| ||||    
T  20205819 ctcgtaagtttagctcagttggtatggacaatgcataatatat 20205861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 21993179 - 21993221
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||| ||||||||||||| ||||||||||||||||    
T  21993179 ctcgtgagcttaactcagttggtatggacaatgcataaaatat 21993221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 23198813 - 23198771
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| || ||| ||||||||||||||||||||||||||||||    
T  23198813 ctcgtgagtttaactcagttggtatgaacaatgcataaaatat 23198771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 39801703 - 39801745
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||||| ||||||||||| ||||    
T  39801703 ctcgtgagcttagctcagttggtatggacaatgcataatatat 39801745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 7670432 - 7670473
Alignment:
Q  57 tcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| ||||||||||||||||| |||||||||||||| ||||    
T  7670432 tcgtgagcttagctcagttggtttgaacaatgcataatatat 7670473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 7908591 - 7908632
Alignment:
Q  57 tcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||| |||| |||||||||||| ||||||||||||||||    
T  7908591 tcgtaagtttagttcagttggtatggacaatgcataaaatat 7908632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 10555410 - 10555365
Alignment:
Q  53 gttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| ||||| |||||||||||||||||||||||| |||| ||||    
T  10555410 gttcttgtaagtttagctcagttggtatgaacaatgtataatatat 10555365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 94
Target Start/End: Original strand, 11373666 - 11373707
Alignment:
Q  53 gttctcgtaagcttagctcagttggtatgaacaatgcataaa 94  Q
    |||||||| ||||||||||||||||| || ||||||||||||    
T  11373666 gttctcgtgagcttagctcagttggtgtggacaatgcataaa 11373707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 13044205 - 13044164
Alignment:
Q  57 tcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| |||||||||||||||||| | ||||||||||||||||    
T  13044205 tcgtgagcttagctcagttggtaaggacaatgcataaaatat 13044164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 89
Target Start/End: Original strand, 14786120 - 14786153
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgc 89  Q
    ||||| ||||||||||||||||||||||||||||    
T  14786120 ctcgtgagcttagctcagttggtatgaacaatgc 14786153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 20243252 - 20243289
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataa 93  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  20243252 ctcgtgagcttagctcagttggtatggacaatgcataa 20243289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 42043124 - 42043087
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatatt 99  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  42043124 agcttagctcagttggtatggacaatgcataatatatt 42043087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 47677641 - 47677592
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatattcaatgt 105  Q
    ||||| || ||||||||||||||  |||||||||||||||||| ||||||    
T  47677641 ctcgtgagtttagctcagttggttagaacaatgcataaaatatgcaatgt 47677592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 2450583 - 2450619
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  2450583 agcttaactcagttggtatgaacaatacataaaatat 2450619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 5458137 - 5458093
Alignment:
Q  54 ttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||| ||||||||||||||| || ||||||||||||| ||||    
T  5458137 ttctcgtgagcttagctcagttgataagaacaatgcataatatat 5458093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 98
Target Start/End: Complemental strand, 6528859 - 6528827
Alignment:
Q  66 tagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||| ||||||||||||||||    
T  6528859 tagctcagttggtatggacaatgcataaaatat 6528827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 24656973 - 24657009
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||| | ||||||||||||||    
T  24656973 agcttagctcagttggtatggataatgcataaaatat 24657009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 31038586 - 31038550
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcata 92  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  31038586 ctcgtgagcttagctcagttggtatggacaatgcata 31038550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 31886011 - 31885967
Alignment:
Q  54 ttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||| || |||| |||||||||||||||||||||||| ||||    
T  31886011 ttctcgtgagtttagttcagttggtatgaacaatgcataatatat 31885967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 38841990 - 38842026
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  38841990 agcttagctcagttggtatggacaatgcataatatat 38842026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 52575944 - 52575986
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  52575944 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 52575986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 14827517 - 14827564
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||    
T  14827517 ttgttctcgtgagcttagctcagttggtatggacaatgcataaaatat 14827564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 43490481 - 43490427
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatattcaatgtcaaaa 110  Q
    ||||| |||||||||||||||||||||||||||||||| |||| ||| |||||||    
T  43490481 ctcgtgagcttagctcagttggtatgaacaatgcataatatatgcaaggtcaaaa 43490427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 3177042 - 3176995
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||||||||||||| ||||||||||| ||||||||||||| ||||    
T  3177042 ttgttctcgtaagcttaactcagttggtaggaacaatgcataatatat 3176995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 97
Target Start/End: Complemental strand, 53705689 - 53705650
Alignment:
Q  58 cgtaagcttagctcagttggtatgaacaatgcataaaata 97  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  53705689 cgtaagcttagctcagttggtaagaacaatgcataaaata 53705650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 21506822 - 21506780
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||||| ||||||||||||||||    
T  21506822 ctcgtgagcttagctcagttggtatggacaatgcataaaatat 21506780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 22722399 - 22722441
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||| ||||||||||||||||||||||    
T  22722399 ctcgtgagcttagctcagttagtatgaacaatgcataaaatat 22722441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 25340988 - 25340946
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||||| ||||||||||||||||    
T  25340988 ctcgtgagcttagctcagttggtatggacaatgcataaaatat 25340946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 28244168 - 28244126
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  28244168 ctcgtgagcttaactcagttggtatgaacaatgcataaaatat 28244126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 44579633 - 44579675
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||||| ||||||||||||||||    
T  44579633 ctcgtgagcttagctcagttggtatggacaatgcataaaatat 44579675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 8831412 - 8831367
Alignment:
Q  53 gttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||||||||||||||||||||||||| ||||| ||||| ||||    
T  8831412 gttctcgtaagcttagctcagttggtatgtacaatacataatatat 8831367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 32836171 - 32836212
Alignment:
Q  57 tcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| |||||||||||||||||||| ||||||||||||||||    
T  32836171 tcgtgagcttagctcagttggtatggacaatgcataaaatat 32836212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 978003 - 977963
Alignment:
Q  58 cgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  978003 cgtaagcttagctcagttggtatggacaatgcataatatat 977963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 32629083 - 32629119
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||| ||||||||||||||||    
T  32629083 agcttagctcagttggtatggacaatgcataaaatat 32629119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 43329283 - 43329247
Alignment:
Q  57 tcgtaagcttagctcagttggtatgaacaatgcataa 93  Q
    |||||||||||||||||| ||||||||||||||||||    
T  43329283 tcgtaagcttagctcagtcggtatgaacaatgcataa 43329247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 107
Target Start/End: Complemental strand, 10498759 - 10498708
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatattcaatgtca 107  Q
    ||||| |||||||||||||||||||| ||||||||||| |||| ||| ||||    
T  10498759 ctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtca 10498708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 10926461 - 10926508
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| |||||||||||||||||||||||| | ||||||||||| ||||    
T  10926461 ttgtcctcgtaagcttagctcagttggtaaggacaatgcataatatat 10926508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 54018479 - 54018428
Alignment:
Q  47 gttgttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||| ||||||| |||| || |||||||||| ||||||||||||||||    
T  54018479 gttgttgtcctcgtaaccttaacttagttggtatggacaatgcataaaatat 54018428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 7868719 - 7868761
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||    
T  7868719 ctcgtgagcttagctcagttggtaagaacaatgcataatatat 7868761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 10840423 - 10840457
Alignment:
Q  64 cttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||||||||||||| ||||    
T  10840423 cttagctcagttggtatgaacaatgcataatatat 10840457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 20370345 - 20370303
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||    
T  20370345 ctcgtgagcttagctcagttgatatggacaatgcataaaatat 20370303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 28150785 - 28150743
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||||||| | ||||||| ||||||||    
T  28150785 ctcgtaagcttagctcagttggtacggacaatgcgtaaaatat 28150743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 32843326 - 32843284
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| ||||||||||||||||| || ||||||||||||||||    
T  32843326 ctcgtgagcttagctcagttggtttggacaatgcataaaatat 32843284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 39481138 - 39481176
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaa 94  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  39481138 ctcgtgagcttagctcagttggtatggacaatgcataaa 39481176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 93
Target Start/End: Complemental strand, 47313437 - 47313399
Alignment:
Q  55 tctcgtaagcttagctcagttggtatgaacaatgcataa 93  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  47313437 tctcgtgagcttagctcagttggtatggacaatgcataa 47313399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 98
Target Start/End: Original strand, 49710713 - 49710759
Alignment:
Q  52 tgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||| | |||||| |||||||||||| |||||||||||||||||    
T  49710713 tgttctcatgagcttaactcagttggtattaacaatgcataaaatat 49710759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 5941357 - 5941316
Alignment:
Q  57 tcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| |||||| ||||||||||||||||||||||||| ||||    
T  5941357 tcgtgagcttaactcagttggtatgaacaatgcataatatat 5941316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 7938722 - 7938763
Alignment:
Q  57 tcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| ||||||| |||||||||||||||||||||||| ||||    
T  7938722 tcgtgagcttagttcagttggtatgaacaatgcataatatat 7938763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 8942015 - 8942056
Alignment:
Q  57 tcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| |||||| ||||||||||||||||||||||||| ||||    
T  8942015 tcgtgagcttaactcagttggtatgaacaatgcataatatat 8942056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 32909368 - 32909323
Alignment:
Q  53 gttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||| |||||| ||||||| ||||| ||||||||||||||||    
T  32909368 gttctcgtgagcttaactcagttagtatggacaatgcataaaatat 32909323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 47040958 - 47040921
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataa 93  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  47040958 ctcgtaagcttagttcagttgatatgaacaatgcataa 47040921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 13800670 - 13800706
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  13800670 agcttagctcagttggtaagaacaatgcataatatat 13800706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 24428531 - 24428495
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  24428531 agcttagctcagttggtatggacaatgcataatatat 24428495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 29631189 - 29631225
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  29631189 agcttagctcagttggtatggacaatgcataatatat 29631225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 35492792 - 35492832
Alignment:
Q  58 cgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||| ||||||||||||| ||||    
T  35492792 cgtaaacttagctcagttggtaagaacaatgcataatatat 35492832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 41737799 - 41737835
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||| | ||||||||||||||||    
T  41737799 agcttagctcagttggtaaggacaatgcataaaatat 41737835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 44968180 - 44968216
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  44968180 agcttaactcagttggtatggacaatgcataaaatat 44968216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 102
Target Start/End: Original strand, 46469280 - 46469320
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatattcaa 102  Q
    |||||||||||||||||| | ||||||||||| ||||||||    
T  46469280 agcttagctcagttggtaaggacaatgcataatatattcaa 46469320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 47471648 - 47471612
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||| |||||||| |||||||    
T  47471648 agcttagctcagttggtatgtacaatgcaaaaaatat 47471612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 93
Target Start/End: Original strand, 50037309 - 50037345
Alignment:
Q  57 tcgtaagcttagctcagttggtatgaacaatgcataa 93  Q
    |||| |||||||||||||||||||| |||||||||||    
T  50037309 tcgtgagcttagctcagttggtatggacaatgcataa 50037345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 53996302 - 53996338
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  53996302 agcttagctcagttggtatggacaatgcataatatat 53996338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 38868505 - 38868581
Alignment:
Q  132 tacttgaag-taggatttgtaactattgtttctataattgattttcacatacaaatttatatttcaattcaatttta 207  Q
    ||||||||| || |||||||| || ||| |||||||||||||||||||| ||||||||||| ||||| |||||||||    
T  38868505 tacttgaagctaagatttgtagcttttggttctataattgattttcacacacaaatttatagttcaactcaatttta 38868581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 40769416 - 40769352
Alignment:
Q  160 ttctataattgattttcacatacaaatttatatttcaattcaattttatattattgtattcaaac 224  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||| |  | |||||||||||    
T  40769416 ttctataattgattttcacacacaaatttataattcaattcaattttacacaaatgtattcaaac 40769352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 26885707 - 26885660
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||    
T  26885707 ttgttctcgtgagtttagctcagttggtatgaacaatgcataaaatat 26885660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 8137932 - 8137974
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  8137932 ctcgtaagcttagctcagttggtatggacaatgcataaaatat 8137974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 14975927 - 14975885
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||||||||| ||||||||||||    
T  14975927 ctcgtgagcttagctcagttggtatgaacagtgcataaaatat 14975885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 1644736 - 1644695
Alignment:
Q  57 tcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| ||||||||||||||||||||| |||||||||||||||    
T  1644736 tcgtgagcttagctcagttggtatgagcaatgcataaaatat 1644695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 28580938 - 28580983
Alignment:
Q  53 gttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||| ||||| |||||||||||||||| ||||||||||||||    
T  28580938 gttctcgtgagcttggctcagttggtatgaataatgcataaaatat 28580983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 33451422 - 33451361
Alignment:
Q  47 gttgttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatattcaatgtcaa 108  Q
    |||||||| ||||| |||||||||||||||||||| | ||||||||| |||| ||| |||||    
T  33451422 gttgttgtcctcgtgagcttagctcagttggtatggataatgcataatatatgcaaggtcaa 33451361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 33445561 - 33445609
Alignment:
Q  50 gttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| ||||| |||||||||||||||||| ||||||||||||| ||||    
T  33445561 gttgtcctcgtgagcttagctcagttggtaggaacaatgcataatatat 33445609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 93
Target Start/End: Original strand, 35103104 - 35103140
Alignment:
Q  57 tcgtaagcttagctcagttggtatgaacaatgcataa 93  Q
    |||| ||||||||||||||||||||||||||||||||    
T  35103104 tcgtgagcttagctcagttggtatgaacaatgcataa 35103140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 8020302 - 8020349
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| |||||||||||||||||||||||| |||||| |||||| ||||    
T  8020302 ttgtcctcgtaagcttagctcagttggtaggaacaacgcataatatat 8020349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 20469380 - 20469333
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||| ||||||| ||||||||||| |||||||||||| ||||    
T  20469380 ttgttctcgtgagcttagatcagttggtataaacaatgcataatatat 20469333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 29499763 - 29499810
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| ||||| ||||||||||| |||||||| ||||||||||||||||    
T  29499763 ttgtcctcgtgagcttagctcaattggtatggacaatgcataaaatat 29499810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 39433402 - 39433449
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| ||||| ||||||||||||||| |||||||||| ||||||||||    
T  39433402 ttgtcctcgtgagcttagctcagttgatatgaacaatacataaaatat 39433449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 4662981 - 4662915
Alignment:
Q  132 tacttgaag-taggatttgtaactattgtttctataattgattttcacatacaaatttatatttcaa 197  Q
    ||||||||| ||||||||||| || ||||||||| |||||||||| ||| |||||| |||| |||||    
T  4662981 tacttgaagctaggatttgtagcttttgtttctagaattgatttttacacacaaatgtatagttcaa 4662915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 207
Target Start/End: Complemental strand, 13384718 - 13384656
Alignment:
Q  145 atttgtaactattgtttctataattgattttcacatacaaatttatatttcaattcaatttta 207  Q
    ||||||| || ||| ||||| |||||||||||||| ||||||||||| ||||| ||| |||||    
T  13384718 atttgtagcttttgattctagaattgattttcacacacaaatttatagttcaactcactttta 13384656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 207
Target Start/End: Complemental strand, 26100214 - 26100148
Alignment:
Q  141 taggatttgtaactattgtttctataattgattttcacatacaaatttatatttcaattcaatttta 207  Q
    ||||||||||| || ||| |||||||||||||||| ||| ||||||||||  ||||| ||| |||||    
T  26100214 taggatttgtagcttttgattctataattgatttttacacacaaatttatggttcaactcactttta 26100148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 37117588 - 37117542
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatattcaa 102  Q
    ||||| ||||||| ||| |||||||||||||||||||| ||||||||    
T  37117588 ctcgtgagcttagatcaattggtatgaacaatgcataatatattcaa 37117542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 98
Target Start/End: Complemental strand, 44037425 - 44037387
Alignment:
Q  60 taagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||| ||||||||||||||||||||||||| ||||    
T  44037425 taagcttaactcagttggtatgaacaatgcataatatat 44037387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 9855047 - 9855088
Alignment:
Q  52 tgttctcgtaagcttagctcagttggtatgaacaatgcataa 93  Q
    ||||||||| | ||| ||||||||||||||||||||||||||    
T  9855047 tgttctcgtgaactttgctcagttggtatgaacaatgcataa 9855088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 13004163 - 13004204
Alignment:
Q  57 tcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| |||||| ||||||||||||| ||||||||||||||||    
T  13004163 tcgtgagcttaactcagttggtatggacaatgcataaaatat 13004204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 13394218 - 13394165
Alignment:
Q  53 gttctcgtaagcttagctcagttggtatgaacaatgcataaaatattcaatgtc 106  Q
    ||||||||||||||| ||| ||||||||  ||||||||||| |||| |||||||    
T  13394218 gttctcgtaagcttaactcggttggtatagacaatgcataatatatgcaatgtc 13394165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 19163600 - 19163563
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataa 93  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  19163600 ctcgtgagcttagctcagttggtatggacaatgcataa 19163563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 26799182 - 26799223
Alignment:
Q  57 tcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||||||| ||||||||||| | ||||||||||||||||    
T  26799182 tcgtaagcttaactcagttggtagggacaatgcataaaatat 26799223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 236
Target Start/End: Original strand, 32927899 - 32928004
Alignment:
Q  132 tacttgaag-taggatttgtaactattgtttctataattgattttcacatacaaatttatatttcaattcaattttatattattgtattcaaacgcatat 230  Q
    ||||||||| ||||||||||| || ||| || || |||| ||||| ||| ||||||||||| ||||| ||| ||||| || | ||||| ||||| || ||    
T  32927899 tacttgaagctaggatttgtagcttttgattatagaattcatttttacacacaaatttatagttcaactcacttttacatgaatgtatccaaacacaaat 32927998  T
Q  231 cacttt 236  Q
    ||||||    
T  32927999 cacttt 32928004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 37750066 - 37750021
Alignment:
Q  53 gttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||| || |||||||||||| |||||||||||||||| ||||    
T  37750066 gttctcgtgagtttagctcagttgatatgaacaatgcataatatat 37750021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 37872975 - 37873016
Alignment:
Q  57 tcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| ||||||||||||||||||||  |||||||||||||||    
T  37872975 tcgtgagcttagctcagttggtatggtcaatgcataaaatat 37873016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 40919422 - 40919381
Alignment:
Q  57 tcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||| ||||||||||||||| ||||||||||||| ||||    
T  40919422 tcgtaagtttagctcagttggtaggaacaatgcataatatat 40919381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 41625188 - 41625233
Alignment:
Q  53 gttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| ||| |||||||||||||||||||||| ||||||||| ||||    
T  41625188 gttcccgtgagcttagctcagttggtatgaataatgcataatatat 41625233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 2958419 - 2958459
Alignment:
Q  53 gttctcgtaagcttagctcagttggtatgaacaatgcataa 93  Q
    |||||||| ||||||| |||||||||||| |||||||||||    
T  2958419 gttctcgtgagcttagttcagttggtatggacaatgcataa 2958459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 9656055 - 9656019
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||| | ||||||||||||||||    
T  9656055 agcttagctcagttggtaaggacaatgcataaaatat 9656019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 30427734 - 30427770
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  30427734 agcttagctcagttggtatggacaatgcataatatat 30427770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 30694497 - 30694461
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  30694497 agcttatctcagtttgtatgaacaatgcataaaatat 30694461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 32878664 - 32878700
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  32878664 agcttagctcagttggtaagaacaatgcataatatat 32878700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 296
Target Start/End: Original strand, 30557521 - 30557674
Alignment:
Q  141 taggatttgtaactattgtttctataattgattttcacatacaaatttatatttcaattcaattttatattattgtattcaaacgcatatcacttttagt 240  Q
    |||||||||||  | ||| ||||| ||||||||||||||  |||||||||| ||||| ||| |||||||| | ||||| ||||| || ||||||| ||||    
T  30557521 taggatttgtagtttttgattctagaattgattttcaca--caaatttatagttcaactcacttttatatgaatgtatccaaacacaaatcacttctagt 30557618  T
Q  241 tagaatccatttcaattaaaatcaatcttacatactcaattttatcaaaatcaatt 296  Q
     ||| ||  ||| ||  |||||||||  |||| | |||||| ||||||||||||||    
T  30557619 cagagtcacttttaaccaaaatcaattctacagaatcaattctatcaaaatcaatt 30557674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 51 - 95
Target Start/End: Original strand, 39452452 - 39452496
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaa 95  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||    
T  39452452 ttgtcctcgtgagcttagctcagttggtatgaacaatgcataaaa 39452496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 2613719 - 2613761
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||||| ||||||||||||||||    
T  2613719 ctcgtgagcttagctcagttggtatggacaatgcataaaatat 2613761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 5503829 - 5503787
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||||||||||||||||||||  |||||||||||||||||    
T  5503829 ctcgtaagcttagctcagttggtagaaacaatgcataaaatat 5503787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 35308174 - 35308224
Alignment:
Q  48 ttgttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||| ||||| ||||||| |||||||||||||||||||||||| ||||    
T  35308174 ttgttgtcctcgtgagcttagttcagttggtatgaacaatgcataatatat 35308224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 98
Target Start/End: Original strand, 45701321 - 45701367
Alignment:
Q  52 tgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| |||| || ||||||||||||||||||||||||||||||||||    
T  45701321 tgttttcgtgagtttagctcagttggtatgaacaatgcataaaatat 45701367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 48681997 - 48681955
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||||||||||||||||| ||||    
T  48681997 ctcgtgagcttagctcagttggtatgaacaatgcataatatat 48681955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 15892792 - 15892833
Alignment:
Q  54 ttctcgtaagcttagctcagttggtatgaacaatgcataaaa 95  Q
    ||||||| ||||||| ||||||||||||||||||||||||||    
T  15892792 ttctcgtgagcttagttcagttggtatgaacaatgcataaaa 15892833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 50595946 - 50595905
Alignment:
Q  57 tcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  50595946 tcgtgagcttagctcaattggtatgaacaatgcataaaatat 50595905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 11049257 - 11049333
Alignment:
Q  132 tacttgaag-taggatttgtaactattgtttctataattgattttcacatacaaatttatatttcaattcaatttta 207  Q
    ||||||||| ||||||||||| || ||| ||||| |||||||||| ||| ||||||||||| ||||| ||| |||||    
T  11049257 tacttgaagctaggatttgtagcttttgattctaaaattgatttttacacacaaatttatagttcaagtcactttta 11049333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 14520947 - 14520983
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||| ||||||||||||||||    
T  14520947 agcttagctcagttggtatggacaatgcataaaatat 14520983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 17188726 - 17188690
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||| ||||||||||||||||    
T  17188726 agcttagctcagttggtatggacaatgcataaaatat 17188690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 25086486 - 25086522
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||| ||||||||||||||||    
T  25086486 agcttagctcagttggtatggacaatgcataaaatat 25086522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 40227832 - 40227868
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||| ||||||||||||||||    
T  40227832 agcttagctcagttggtatggacaatgcataaaatat 40227868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 42888578 - 42888614
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||| ||||||||||||||||    
T  42888578 agcttagctcagttggtatggacaatgcataaaatat 42888614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 48100725 - 48100761
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||| ||||||||||||||||    
T  48100725 agcttagctcagttggtatggacaatgcataaaatat 48100761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 52262224 - 52262188
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||| ||||||||||||||||||||||||||||||    
T  52262224 agcttaactcagttggtatgaacaatgcataaaatat 52262188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 7524118 - 7524225
Alignment:
Q  130 tttacttgaagt-aggatttgtaactattgtttctataattgattttcacatacaaatttatatttcaattcaattttatattattgtattcaaacgcat 228  Q
    |||||||||||| |||||||||| || ||| || || |||||||||| ||| ||||||||||| ||||| ||| ||||| || | ||| | ||||| ||     
T  7524118 tttacttgaagttaggatttgtagcttttgattatagaattgatttttacacacaaatttatagttcaactcacttttacataaatgtgtccaaacacaa 7524217  T
Q  229 atcacttt 236  Q
    ||||||||    
T  7524218 atcacttt 7524225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 13590102 - 13590149
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| ||||| ||||||||||||||||| || ||||||||||||||||    
T  13590102 ttgtcctcgtgagcttagctcagttggtttggacaatgcataaaatat 13590149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 94
Target Start/End: Original strand, 20481092 - 20481135
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaa 94  Q
    |||| ||||| ||||||||||||||||| |||||||||||||||    
T  20481092 ttgtcctcgtgagcttagctcagttggtttgaacaatgcataaa 20481135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 26834512 - 26834559
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| ||||| ||||||||||||||| ||||||| |||||||||||||    
T  26834512 ttgtcctcgtgagcttagctcagttgatatgaacgatgcataaaatat 26834559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 28832240 - 28832193
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||| || |||||| ||||||||||||||||||||||||| ||||    
T  28832240 ttgttcttgtgagcttaactcagttggtatgaacaatgcataatatat 28832193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 35442847 - 35442898
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatattcaa 102  Q
    ||||| |||| |||| | ||||||||||||||||||||||||| ||||||||    
T  35442847 ttgttttcgtgagctaaactcagttggtatgaacaatgcataatatattcaa 35442898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 39387860 - 39387813
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||| ||||||||| |||||||||| | ||||||||||||||    
T  39387860 ttgttctcgtgagcttagctaagttggtatggataatgcataaaatat 39387813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 41032923 - 41032970
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| ||||| |||||| |||||||| |||||||||||||||||||||    
T  41032923 ttgtcctcgtgagcttaactcagttgatatgaacaatgcataaaatat 41032970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 141 - 208
Target Start/End: Complemental strand, 50569711 - 50569644
Alignment:
Q  141 taggatttgtaactattgtttctataattgattttcacatacaaatttatatttcaattcaattttat 208  Q
    |||||| ||||||| |||  ||||||||||| ||||||| ||||||||||| |||||| || ||||||    
T  50569711 taggatctgtaacttttgaatctataattgaatttcacaaacaaatttatagttcaatccagttttat 50569644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 98
Target Start/End: Complemental strand, 124504 - 124466
Alignment:
Q  60 taagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  124504 taagcttagctcatttggtatggacaatgcataaaatat 124466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 13673542 - 13673584
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||| |||||| |||||||||||||||||||    
T  13673542 ctcgtgagcttagctcggttggtttgaacaatgcataaaatat 13673584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 16826351 - 16826393
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||    
T  16826351 ctcgtgagcttagctcagttgctatggacaatgcataaaatat 16826393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 17139581 - 17139535
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatattcaa 102  Q
    ||||| |||||||||||||||||| | ||||||||||| ||||||||    
T  17139581 ctcgtgagcttagctcagttggtagggacaatgcataatatattcaa 17139535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 93
Target Start/End: Complemental strand, 24752717 - 24752675
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataa 93  Q
    |||| ||||| |||||||||||||||||||| |||||||||||    
T  24752717 ttgtcctcgtgagcttagctcagttggtatggacaatgcataa 24752675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 26086926 - 26086976
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatattcaatgtc 106  Q
    ||||| |||||| |||||||||||||| |||||||||| |||| |||||||    
T  26086926 ctcgtgagcttaactcagttggtatgatcaatgcataatatatacaatgtc 26086976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 27853352 - 27853394
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||| ||||||||||||||||||||||||| ||||    
T  27853352 ctcgtgagcttaactcagttggtatgaacaatgcataatatat 27853394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 29739334 - 29739376
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||| | ||||||||||||||||    
T  29739334 ctcgttagcttagctcagttggtaaggacaatgcataaaatat 29739376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 98
Target Start/End: Original strand, 32962556 - 32962602
Alignment:
Q  52 tgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||| || ||| || ||||||||||||||||||||||||||||||    
T  32962556 tgttcttgtgagcataactcagttggtatgaacaatgcataaaatat 32962602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 40735069 - 40735027
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||| ||||||||||| ||||| ||||||||||||||||    
T  40735069 ctcgtaagtttagctcagttagtatggacaatgcataaaatat 40735027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 42045436 - 42045394
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||||| ||||||||||| ||||    
T  42045436 ctcgtgagcttagctcagttggtatggacaatgcataatatat 42045394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 93
Target Start/End: Complemental strand, 2636823 - 2636782
Alignment:
Q  52 tgttctcgtaagcttagctcagttggtatgaacaatgcataa 93  Q
    ||||||||| |||||| ||||||||||||| |||||||||||    
T  2636823 tgttctcgtgagcttaactcagttggtatggacaatgcataa 2636782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 3510008 - 3509963
Alignment:
Q  53 gttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||| | |||||||||||||||||| ||||||||||| ||||    
T  3510008 gttctcgtgaacttagctcagttggtatggacaatgcataatatat 3509963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 7550894 - 7550935
Alignment:
Q  57 tcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| |||||| |||||||| |||||||||||||||||||||    
T  7550894 tcgtgagcttaactcagttgatatgaacaatgcataaaatat 7550935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 17339212 - 17339249
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataa 93  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  17339212 ctcgtaagcttaactcagttggtatgaacaatacataa 17339249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 95
Target Start/End: Complemental strand, 17605454 - 17605421
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaa 95  Q
    ||||||||||||||||||||||||||||| ||||    
T  17605454 agcttagctcagttggtatgaacaatgcacaaaa 17605421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 21041338 - 21041383
Alignment:
Q  53 gttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||| || ||| ||||||||||||| ||||||||||||||||    
T  21041338 gttctcgtgagtttacctcagttggtatggacaatgcataaaatat 21041383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 26498059 - 26498100
Alignment:
Q  57 tcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| |||||||||||||||||| | ||||||||||||||||    
T  26498059 tcgtgagcttagctcagttggtacggacaatgcataaaatat 26498100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 27526824 - 27526783
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcata 92  Q
    |||||||||| | |||||||||||||| ||||||||||||||    
T  27526824 ttgttctcgtgatcttagctcagttggaatgaacaatgcata 27526783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 93
Target Start/End: Complemental strand, 29451050 - 29451009
Alignment:
Q  52 tgttctcgtaagcttagctcagttggtatgaacaatgcataa 93  Q
    ||||||||| |||||| ||||||||||||| |||||||||||    
T  29451050 tgttctcgtgagcttaactcagttggtatggacaatgcataa 29451009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 30895328 - 30895373
Alignment:
Q  53 gttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||| |||||| ||||||||||||| ||||| ||||||||||    
T  30895328 gttctcgtgagcttaactcagttggtatggacaatacataaaatat 30895373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 237
Target Start/End: Complemental strand, 34721889 - 34721812
Alignment:
Q  160 ttctataattgattttcacatacaaatttatatttcaattcaattttatattattgtattcaaacgcatatcactttt 237  Q
    |||||||||||||||||||| ||||||||||| ||| | | | ||||| || | ||||||||||  || |||||||||    
T  34721889 ttctataattgattttcacacacaaatttatagttcgacttacttttacatcaatgtattcaaatacaaatcactttt 34721812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 105
Target Start/End: Original strand, 52043270 - 52043319
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatattcaatgt 105  Q
    ||||| || ||||||||||||||||| | |||||||||||||| ||||||    
T  52043270 ctcgtgagtttagctcagttggtatggataatgcataaaatatgcaatgt 52043319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 14390 - 14426
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  14390 agcttagctcagttggtataaacaatgcataatatat 14426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 6423831 - 6423791
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcat 91  Q
    |||| ||||| |||||| |||||||||||||||||||||||    
T  6423831 ttgtcctcgtgagcttaactcagttggtatgaacaatgcat 6423791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 95
Target Start/End: Original strand, 6567702 - 6567746
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaa 95  Q
    |||| ||||| ||||||||||| |||||||| |||||||||||||    
T  6567702 ttgtcctcgtgagcttagctcaattggtatggacaatgcataaaa 6567746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 8253742 - 8253778
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  8253742 agcttagctcagttggtatggacaatgcataatatat 8253778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 11410630 - 11410666
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  11410630 agcttaactcagttggtatgaacaatacataaaatat 11410666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 21015965 - 21016001
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  21015965 agcttagctcagttggtaagaacaatgcataatatat 21016001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 23203325 - 23203361
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||  ||||||||||||||||||    
T  23203325 agcttagctcagttggttggaacaatgcataaaatat 23203361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 45140064 - 45140028
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  45140064 agcttagctcagttggtatggacaatgcataatatat 45140028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 246
Target Start/End: Original strand, 4910915 - 4911030
Alignment:
Q  132 tacttgaag-taggatttgtaactattgtttctataattgattttcacatacaaatttatatttcaattcaattttatattattgtattcaaacgcatat 230  Q
    ||||||||| || |||||||| || ||| ||||| |||||||||||||||||||||||||| ||| | ||| ||||| || | ||||| |||||  | ||    
T  4910915 tacttgaagctatgatttgtagcttttgattctagaattgattttcacatacaaatttatagttcgactcacttttacataaatgtatccaaacataaat 4911014  T
Q  231 cacttttagttagaat 246  Q
    |||||||||| |||||    
T  4911015 cacttttagtcagaat 4911030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 33938745 - 33938701
Alignment:
Q  54 ttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||    
T  33938745 ttctcgtgagcttagctcagttggtatgaacaatgcataatatat 33938701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 98
Target Start/End: Original strand, 2108718 - 2108764
Alignment:
Q  52 tgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||||| |||||| ||||||||||||| ||||||||||||||||    
T  2108718 tgttctcgtgagcttaactcagttggtatggacaatgcataaaatat 2108764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 4494935 - 4494893
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||||| ||||||||||||||||    
T  4494935 ctcgtgagcttagctcagttggtatggacaatgcataaaatat 4494893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 9444954 - 9444996
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| ||||||||||||||||||||||||||| |||||||||    
T  9444954 ctcgtgagcttagctcagttggtatgaacaatgtataaaatat 9444996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 25195415 - 25195329
Alignment:
Q  160 ttctataattgattttcacatacaaatttatatttcaattcaattttatattattgtattcaaacgcatatcacttttagttagaat 246  Q
    |||||||||||||||||| | ||||||||| | ||||| ||| ||||| || | ||||| ||||| || |||||||||| |||||||    
T  25195415 ttctataattgattttcatacacaaatttacaattcaactcacttttacataaatgtatccaaacacaaatcacttttaattagaat 25195329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 9581960 - 9582005
Alignment:
Q  53 gttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||| |||||||||||||||||  ||||||||||||||||||    
T  9581960 gttctcgtgagcttagctcagttggttggaacaatgcataaaatat 9582005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 14036343 - 14036306
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataa 93  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  14036343 ctcgtaaccttagctcagttggtatgaacaatgcataa 14036306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 24269877 - 24269922
Alignment:
Q  53 gttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||| |||||||||||||| ||||| ||||||||||||||||    
T  24269877 gttctcgtgagcttagctcagttagtatggacaatgcataaaatat 24269922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 26320626 - 26320585
Alignment:
Q  57 tcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| |||||||||||||||||||| ||||||||||||||||    
T  26320626 tcgtgagcttagctcagttggtatggacaatgcataaaatat 26320585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 9111039 - 9111086
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| ||||| ||||||| |||||||||||||||||||||||| ||||    
T  9111039 ttgtcctcgtgagcttagttcagttggtatgaacaatgcataatatat 9111086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 12333637 - 12333590
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||||||||    
T  12333637 ttgtcctcgtgagcttagctcagttagtatggacaatgcataaaatat 12333590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 98
Target Start/End: Original strand, 32149138 - 32149177
Alignment:
Q  59 gtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  32149138 gtaagcttagctcagttggtaagaacaatgcataatatat 32149177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 32193928 - 32193881
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||| || ||||||||||||||| ||||||||||||| ||||    
T  32193928 ttgttctcgtgagtttagctcagttggtaagaacaatgcataatatat 32193881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 2445296 - 2445338
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||| |||||||| |||||||||||||||| ||||    
T  2445296 ctcgtaagcttaactcagttgatatgaacaatgcataatatat 2445338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 20744135 - 20744177
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||||| ||||||||||| ||||    
T  20744135 ctcgtgagcttagctcagttggtatggacaatgcataatatat 20744177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 28951396 - 28951438
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||| ||||||||||||||||||||||||| ||||    
T  28951396 ctcgtgagcttaactcagttggtatgaacaatgcataatatat 28951438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 32053785 - 32053827
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||||| ||||||||||| ||||    
T  32053785 ctcgtgagcttagctcagttggtatggacaatgcataatatat 32053827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 247
Target Start/End: Original strand, 3482088 - 3482169
Alignment:
Q  166 aattgattttcacatacaaatttatatttcaattcaattttatattattgtattcaaacgcatatcacttttagttagaatc 247  Q
    |||||||||||||| |||| |||||| ||||| | | ||||| || | ||||||||||| || |||||||||| | ||||||    
T  3482088 aattgattttcacacacaagtttatagttcaacttacttttacatgaatgtattcaaacacaaatcacttttattgagaatc 3482169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 236
Target Start/End: Complemental strand, 5724708 - 5724603
Alignment:
Q  132 tacttgaag-taggatttgtaactattgtttctataattgattttcacatacaaatttatatttcaattcaattttatattattgtattcaaacgcatat 230  Q
    ||||||||| |||||||||||||| ||  |||||||||||||||| ||| |||||| |||  || || ||| |||||||| |   ||||||||| || ||    
T  5724708 tacttgaagctaggatttgtaactttttattctataattgatttttacacacaaatatatcatttaactcacttttatatgaacatattcaaacacaaat 5724609  T
Q  231 cacttt 236  Q
    ||||||    
T  5724608 cacttt 5724603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 7989253 - 7989212
Alignment:
Q  57 tcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| |||||||||||||||||||| |||||| |||||||||    
T  7989253 tcgtgagcttagctcagttggtatggacaatgtataaaatat 7989212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 9372422 - 9372377
Alignment:
Q  53 gttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||||||||||||||||||| ||||| |||| |||||| ||||    
T  9372422 gttctcgtaagcttagctcagttagtatggacaacgcataatatat 9372377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 16130763 - 16130804
Alignment:
Q  57 tcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| ||||||||| |||||||||| ||||||||||||||||    
T  16130763 tcgtgagcttagcttagttggtatggacaatgcataaaatat 16130804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 12276293 - 12276253
Alignment:
Q  58 cgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||| ||||||||||||| ||||    
T  12276293 cgtaaacttagctcagttggtaagaacaatgcataatatat 12276253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 12329279 - 12329315
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  12329279 agcttagctcagttgttatgaacaatacataaaatat 12329315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 12700479 - 12700443
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  12700479 agcttagttcagttggtatgaacaatgcataatatat 12700443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 17225875 - 17225935
Alignment:
Q  147 ttgtaactattgtttctataattgattttcacatacaaatttatatttcaattcaatttta 207  Q
    ||||| || ||| ||||| |||||||||| ||||||||||||||| ||||| ||| |||||    
T  17225875 ttgtagcttttgattctagaattgatttttacatacaaatttatagttcaactcagtttta 17225935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 24827055 - 24827091
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  24827055 agcttagctcagttgatatggacaatgcataaaatat 24827091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 17736790 - 17736832
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  17736790 ctcgtgagcttagctcagttggtatgaacaatgcataaaatat 17736832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 29133548 - 29133506
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  29133548 ctcgtaagtttagctcagttggtatgaacaatgcataaaatat 29133506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 98
Target Start/End: Original strand, 6765610 - 6765649
Alignment:
Q  59 gtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  6765610 gtaagcttagctcagttggtatggacaatgcataaaatat 6765649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 42714431 - 42714478
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||| ||||||| |||||||||||| ||||||||||||||||    
T  42714431 ttgttctcgtgagcttagttcagttggtatggacaatgcataaaatat 42714478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 7350543 - 7350585
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||||||||| ||||||||||| ||||    
T  7350543 ctcgtaagcttagctcagttggtatggacaatgcataatatat 7350585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 40365470 - 40365428
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||||| ||||||||||||||||    
T  40365470 ctcgtgagcttagctcagttggtatgtacaatgcataaaatat 40365428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 98
Target Start/End: Original strand, 41668656 - 41668694
Alignment:
Q  60 taagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  41668656 taagcttagctcagttggtatgaacaatgcataatatat 41668694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 98
Target Start/End: Complemental strand, 16221401 - 16221368
Alignment:
Q  65 ttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||||||||||||||||||||||||||||||    
T  16221401 ttagctcagttggtatgaacaatgcataaaatat 16221368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 30956422 - 30956462
Alignment:
Q  52 tgttctcgtaagcttagctcagttggtatgaacaatgcata 92  Q
    ||||||| | |||||||||||||||||||||||||||||||    
T  30956422 tgttctcatgagcttagctcagttggtatgaacaatgcata 30956462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 3752844 - 3752797
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| ||||| |||||||||| |||| |||||||||||||||||||||    
T  3752844 ttgtcctcgtgagcttagctcggttgttatgaacaatgcataaaatat 3752797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 8800763 - 8800700
Alignment:
Q  144 gatttgtaactattgtttctataattgattttcacatacaaatttatatttcaattcaatttta 207  Q
    ||||||||||| |||  ||||||||||||||| | ||||||||||||| ||||| ||| |||||    
T  8800763 gatttgtaacttttgaatctataattgattttaatatacaaatttataattcaactcactttta 8800700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 9517078 - 9517031
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| ||||| || ||||||||||||||||||||||||||||| ||||    
T  9517078 ttgtcctcgtgagattagctcagttggtatgaacaatgcataatatat 9517031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 99
Target Start/End: Complemental strand, 29798581 - 29798538
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatatt 99  Q
    ||||| |||||| ||||||||||||| |||||||||||||||||    
T  29798581 ctcgtgagcttaactcagttggtatggacaatgcataaaatatt 29798538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 37984347 - 37984394
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| ||||||| ||||||||||||||||| |||||||||||| ||||    
T  37984347 ttgtcctcgtaaacttagctcagttggtataaacaatgcataatatat 37984394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 42475179 - 42475132
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| ||||| |||||| |||||||||||| |||||||||||||||||    
T  42475179 ttgtcctcgtgagcttaactcagttggtataaacaatgcataaaatat 42475132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 93
Target Start/End: Original strand, 6471258 - 6471300
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataa 93  Q
    ||||||||||||||||| ||||||||||||| |||||| ||||    
T  6471258 ttgttctcgtaagcttaactcagttggtatggacaatgtataa 6471300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 7201504 - 7201546
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| ||||||||||||||||| |||||||||||||| ||||    
T  7201504 ctcgtgagcttagctcagttggtttgaacaatgcataatatat 7201546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 9383273 - 9383231
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||||| ||||||||||| ||||    
T  9383273 ctcgtgagcttagctcagttggtatggacaatgcataatatat 9383231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 9842266 - 9842224
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||| | ||||||||||||||||    
T  9842266 ctcgtgagcttagctcagttggtagggacaatgcataaaatat 9842224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 10109710 - 10109668
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| ||||||||||||||||| || ||||||||||||||||    
T  10109710 ctcgtgagcttagctcagttggtttggacaatgcataaaatat 10109668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 19189812 - 19189766
Alignment:
Q  52 tgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||||| | |||| ||||||||||||||||||||||||| ||||    
T  19189812 tgttctcgtgaacttaactcagttggtatgaacaatgcataatatat 19189766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 23984001 - 23984043
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||||||||||||| |||||||| ||||||||||| ||||    
T  23984001 ctcgtaagcttagctcaattggtatggacaatgcataatatat 23984043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 25562065 - 25562019
Alignment:
Q  52 tgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||||||| |||||||||||||||| | ||| ||||||||||||    
T  25562065 tgttctcgtaaacttagctcagttggtaaggacagtgcataaaatat 25562019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 207
Target Start/End: Original strand, 32596012 - 32596074
Alignment:
Q  145 atttgtaactattgtttctataattgattttcacatacaaatttatatttcaattcaatttta 207  Q
    |||||||||| ||| ||||| |||||||||| ||||||||||| ||| ||||| ||| |||||    
T  32596012 atttgtaacttttgattctaaaattgatttttacatacaaattcataattcaactcactttta 32596074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 33019220 - 33019118
Alignment:
Q  145 atttgtaactattgtttctataattgattttcacatacaaatttatatttcaattcaattttatattattgtattcaaacgcatatcacttttagttaga 244  Q
    ||||||| || ||| || || |||||||||||||| | ||||||||| ||||| ||| ||||| || | || || ||||| || |||||||||||| |||    
T  33019220 atttgtagcttttggttttagaattgattttcacacataaatttatagttcaactcacttttacatgaatgcatccaaacacaaatcacttttagtcaga 33019121  T
Q  245 atc 247  Q
    |||    
T  33019120 atc 33019118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 35404619 - 35404577
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||    
T  35404619 ctcgttagcttagttcagttggtatgaacaatgtataaaatat 35404577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 41187521 - 41187479
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| ||||||||| |||||||||| ||||||||||||||||    
T  41187521 ctcgtgagcttagcttagttggtatggacaatgcataaaatat 41187479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 197
Target Start/End: Original strand, 3352112 - 3352149
Alignment:
Q  160 ttctataattgattttcacatacaaatttatatttcaa 197  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  3352112 ttctataattgattttcacacacaaatttatgtttcaa 3352149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 19967415 - 19967452
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataa 93  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  19967415 ctcgtgagcttagctcagttgatatgaacaatgcataa 19967452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 19976146 - 19976187
Alignment:
Q  52 tgttctcgtaagcttagctcagttggtatgaacaatgcataa 93  Q
    ||||||||| || ||||||||||||||||| |||||||||||    
T  19976146 tgttctcgtgagtttagctcagttggtatggacaatgcataa 19976187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 32167865 - 32167820
Alignment:
Q  53 gttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| |||||||||||||||||||||| | ||||||||||| ||||    
T  32167865 gttcccgtaagcttagctcagttggtaaggacaatgcataacatat 32167820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 44526125 - 44526162
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataa 93  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  44526125 ctcgtgagcttagctcagttggtatggacaatgcataa 44526162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 10126126 - 10126198
Alignment:
Q  166 aattgattttcacatacaaatttatatttcaattcaattttatattattgtattcaaacgcatatcactttta 238  Q
    |||||||||||| | | ||||||||| ||||| ||| ||| || | ||||||||||||| || ||||||||||    
T  10126126 aattgattttcataaataaatttataattcaactcactttaatttaattgtattcaaacacaaatcactttta 10126198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 20565141 - 20565097
Alignment:
Q  54 ttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||| |||||||||||||||||| | ||||||||||| ||||    
T  20565141 ttctcgtgagcttagctcagttggtagggacaatgcataatatat 20565097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 25598628 - 25598584
Alignment:
Q  54 ttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||| | |||||||||||||||||| ||||||||||| ||||    
T  25598628 ttctcgtgaacttagctcagttggtatggacaatgcataatatat 25598584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 27314870 - 27314906
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  27314870 agcttaactcagttggtaagaacaatgcataaaatat 27314906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 31582189 - 31582225
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  31582189 agcttagctcagttggtttgaacaatgcatagaatat 31582225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 37133046 - 37133002
Alignment:
Q  54 ttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||| |||||||||||||||||  | ||||||||||||||||    
T  37133046 ttctcgtgagcttagctcagttggttgggacaatgcataaaatat 37133002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 41672350 - 41672306
Alignment:
Q  54 ttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||| || |||| ||||||||||| |||||||||||||||||    
T  41672350 ttctcgttagtttagttcagttggtataaacaatgcataaaatat 41672306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 45066484 - 45066528
Alignment:
Q  166 aattgattttcacatacaaatttatatttcaattcaattttatat 210  Q
    |||| ||||||||| ||||||||||| ||||||||| ||||||||    
T  45066484 aatttattttcacacacaaatttataattcaattcatttttatat 45066528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 37529 - 37574
Alignment:
Q  53 gttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||    
T  37529 gttctcgtgagcttagctaagttggtatgaacaatgcataaaatat 37574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 47310 - 47263
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  47310 ttgttttcgtgagcttagctcagttggtatggacaatgcataaaatat 47263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 118811 - 118858
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| ||||| ||||||||||||||||| |||||||||||||||||||    
T  118811 ttgtcctcgtgagcttagctcagttggtttgaacaatgcataaaatat 118858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 185255 - 185302
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| ||||| |||||||||||||||||||| ||||||||||||||||    
T  185255 ttgtcctcgtgagcttagctcagttggtatggacaatgcataaaatat 185302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 223155 - 223197
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||||| ||||| ||||||||||    
T  223155 ctcgtgagcttagctcagttggtatggacaatacataaaatat 223197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 21823 - 21777
Alignment:
Q  52 tgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||||| |||||||||||||||||||  ||||||||||||||||    
T  21823 tgttctcgtgagcttagctcagttggtatagacaatgcataaaatat 21777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 7468 - 7513
Alignment:
Q  53 gttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||| |||||| |||| |||||||||||||||||||||||||    
T  7468 gttctcgtgagcttaactcaattggtatgaacaatgcataaaatat 7513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 204580 - 204629
Alignment:
Q  49 tgttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||| ||||| ||| |||||||||||| ||||||||||||||||||||    
T  204580 tgttgtcctcgtgagcatagctcagttggcatgaacaatgcataaaatat 204629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0735 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 1531 - 1567
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||||| ||||||||||||||||    
T  1531 agcttagctcagttggtatggacaatgcataaaatat 1567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 1245 - 1292
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||| ||||| ||||||||| ||||||| |||||||||||||||||||    
T  1245 ttgtcctcgtgagcttagcttagttggtttgaacaatgcataaaatat 1292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 19232 - 19278
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||  |||||||||| ||||||||||||||||||    
T  19232 ttgttctcgtaagcttat-tcagttggtaggaacaatgcataaaatat 19278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 39995 - 40037
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||||| ||||||||||| ||||    
T  39995 ctcgtgagcttagctcagttggtatggacaatgcataatatat 40037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 5422 - 5464
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||    
T  5422 ctcgtgagcttagctcagttggtaagaacaatgcataatatat 5464  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 171156 - 171198
Alignment:
Q  56 ctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||| |||||||||| |||||| |||||||||||||||||||    
T  171156 ctcgtgagcttagctcggttggtttgaacaatgcataaaatat 171198  T

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Target: scaffold0122 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 14253 - 14208
Alignment:
Q  53 gttctcgtaagcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||| || ||| ||||||||||||||||||||||||| ||||    
T  14253 gttctcgtgagtttaactcagttggtatgaacaatgcataatatat 14208  T

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Target: scaffold0458 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0458
Description:

Target: scaffold0458; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 95
Target Start/End: Complemental strand, 11221 - 11177
Alignment:
Q  51 ttgttctcgtaagcttagctcagttggtatgaacaatgcataaaa 95  Q
    |||| ||||| ||||||| |||||||||||| |||||||||||||    
T  11221 ttgtcctcgtgagcttagatcagttggtatggacaatgcataaaa 11177  T

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Target: scaffold0180 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 17726 - 17766
Alignment:
Q  53 gttctcgtaagcttagctcagttggtatgaacaatgcataa 93  Q
    |||||||| || ||||||||||||||||| |||||||||||    
T  17726 gttctcgtgagtttagctcagttggtatggacaatgcataa 17766  T

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Target: scaffold0135 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 32614 - 32650
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  32614 agcttagctcagttggtttgaacaatgcataatatat 32650  T

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Target: scaffold0072 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 25698 - 25734
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  25698 agcttagctcagttggtaagaacaatgcataatatat 25734  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 161144 - 161180
Alignment:
Q  62 agcttagctcagttggtatgaacaatgcataaaatat 98  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  161144 agcttaactcagttggtatggacaatgcataaaatat 161180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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