View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17515_low_32 (Length: 255)

Name: NF17515_low_32
Description: NF17515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17515_low_32
NF17515_low_32
[»] chr3 (69 HSPs)
chr3 (1-249)||(33235545-33235792)
chr3 (107-242)||(12914036-12914171)
chr3 (107-230)||(40272813-40272936)
chr3 (118-230)||(6411834-6411945)
chr3 (106-230)||(22609799-22609922)
chr3 (107-243)||(13628791-13628929)
chr3 (107-243)||(39203536-39203670)
chr3 (107-243)||(26869727-26869862)
chr3 (106-217)||(31904856-31904968)
chr3 (108-243)||(26573147-26573282)
chr3 (107-217)||(54484736-54484847)
chr3 (107-230)||(14986990-14987115)
chr3 (119-243)||(34420656-34420781)
chr3 (107-230)||(10795424-10795549)
chr3 (107-241)||(46421035-46421172)
chr3 (107-243)||(516429-516568)
chr3 (107-243)||(1217110-1217244)
chr3 (107-241)||(29366721-29366857)
chr3 (107-217)||(45786215-45786327)
chr3 (107-243)||(53996566-53996703)
chr3 (126-230)||(55401209-55401314)
chr3 (110-217)||(7943036-7943143)
chr3 (107-240)||(13730603-13730738)
chr3 (118-240)||(45948850-45948972)
chr3 (110-243)||(54374349-54374483)
chr3 (107-217)||(49013474-49013586)
chr3 (104-243)||(22122915-22123052)
chr3 (107-230)||(31592882-31593003)
chr3 (108-243)||(8247688-8247826)
chr3 (155-240)||(4495713-4495798)
chr3 (125-214)||(9276313-9276401)
chr3 (107-214)||(15797271-15797376)
chr3 (106-217)||(31672739-31672851)
chr3 (156-217)||(47624088-47624148)
chr3 (155-240)||(54032608-54032693)
chr3 (108-205)||(353351-353450)
chr3 (107-199)||(34771365-34771457)
chr3 (118-213)||(19731052-19731147)
chr3 (107-217)||(25517171-25517282)
chr3 (107-217)||(16735487-16735596)
chr3 (107-181)||(24578007-24578081)
chr3 (107-243)||(25944489-25944626)
chr3 (120-231)||(43114882-43114995)
chr3 (159-243)||(45620881-45620966)
chr3 (107-191)||(52926220-52926304)
chr3 (107-243)||(5173720-5173857)
chr3 (123-243)||(9607223-9607345)
chr3 (118-213)||(19751628-19751723)
chr3 (107-243)||(45139479-45139615)
chr3 (156-214)||(52428527-52428585)
chr3 (191-239)||(35417940-35417988)
chr3 (118-213)||(44403567-44403663)
chr3 (156-243)||(30928197-30928284)
chr3 (106-145)||(31922839-31922878)
chr3 (164-241)||(7696945-7697020)
chr3 (181-243)||(12525427-12525489)
chr3 (107-181)||(24577917-24577991)
chr3 (166-230)||(21875046-21875111)
chr3 (179-243)||(10870025-10870088)
chr3 (156-243)||(33926103-33926190)
chr3 (172-211)||(39212042-39212081)
chr3 (98-141)||(47624221-47624264)
chr3 (107-141)||(4495677-4495711)
chr3 (107-141)||(10484617-10484651)
chr3 (107-141)||(40390363-40390397)
chr3 (107-141)||(54032572-54032606)
chr3 (157-205)||(8410918-8410966)
chr3 (107-139)||(24851302-24851334)
chr3 (157-217)||(52952532-52952592)
[»] chr1 (70 HSPs)
chr1 (107-243)||(46247954-46248090)
chr1 (120-240)||(23768334-23768454)
chr1 (107-243)||(34725099-34725233)
chr1 (107-243)||(18944664-18944803)
chr1 (107-243)||(32632558-32632693)
chr1 (107-243)||(10668246-10668384)
chr1 (107-243)||(35005144-35005282)
chr1 (107-203)||(4349699-4349795)
chr1 (107-243)||(14617059-14617195)
chr1 (107-243)||(27474302-27474437)
chr1 (109-240)||(46991828-46991959)
chr1 (107-240)||(20004091-20004226)
chr1 (107-240)||(30395727-30395862)
chr1 (107-243)||(27201668-27201806)
chr1 (118-240)||(6925124-6925246)
chr1 (117-243)||(18724557-18724682)
chr1 (107-243)||(38478283-38478417)
chr1 (107-243)||(41319807-41319943)
chr1 (109-230)||(45402128-45402251)
chr1 (107-217)||(35253188-35253296)
chr1 (107-212)||(1517312-1517418)
chr1 (118-243)||(45264411-45264537)
chr1 (110-243)||(45812541-45812672)
chr1 (107-243)||(47214532-47214666)
chr1 (98-217)||(31382206-31382324)
chr1 (107-217)||(23796512-23796622)
chr1 (160-209)||(4430080-4430129)
chr1 (107-243)||(6983812-6983946)
chr1 (107-201)||(18741958-18742054)
chr1 (115-217)||(19701617-19701720)
chr1 (128-243)||(25468285-25468400)
chr1 (118-243)||(2435798-2435924)
chr1 (109-199)||(10378738-10378828)
chr1 (171-217)||(17470411-17470457)
chr1 (108-207)||(19932755-19932856)
chr1 (107-212)||(8197095-8197200)
chr1 (107-243)||(19414460-19414594)
chr1 (118-243)||(35019251-35019375)
chr1 (107-243)||(9939482-9939621)
chr1 (161-217)||(34679274-34679330)
chr1 (118-201)||(46859129-46859213)
chr1 (126-217)||(11596560-11596650)
chr1 (119-217)||(12126850-12126946)
chr1 (107-198)||(43768205-43768296)
chr1 (126-217)||(44485129-44485220)
chr1 (126-196)||(15505632-15505702)
chr1 (120-217)||(43207542-43207640)
chr1 (108-230)||(22324927-22325049)
chr1 (118-243)||(35117777-35117905)
chr1 (109-241)||(39214961-39215094)
chr1 (123-243)||(18335305-18335425)
chr1 (163-243)||(24564365-24564445)
chr1 (107-200)||(42304208-42304303)
chr1 (108-243)||(15511150-15511288)
chr1 (107-213)||(20999851-20999957)
chr1 (112-230)||(30682848-30682963)
chr1 (156-216)||(27136701-27136762)
chr1 (171-243)||(52910238-52910311)
chr1 (171-239)||(50760291-50760359)
chr1 (160-243)||(31272429-31272511)
chr1 (152-217)||(19656151-19656217)
chr1 (156-217)||(33223031-33223092)
chr1 (107-169)||(50606498-50606560)
chr1 (178-243)||(22327120-22327185)
chr1 (118-243)||(23371145-23371268)
chr1 (156-217)||(34149010-34149071)
chr1 (156-243)||(20036241-20036329)
chr1 (173-217)||(20169156-20169200)
chr1 (156-200)||(21910699-21910743)
chr1 (187-215)||(25290214-25290242)
[»] chr7 (57 HSPs)
chr7 (104-243)||(11617586-11617725)
chr7 (107-242)||(2541020-2541155)
chr7 (107-241)||(23419675-23419809)
chr7 (98-242)||(19426882-19427025)
chr7 (98-240)||(7879639-7879781)
chr7 (107-243)||(21172010-21172144)
chr7 (107-243)||(31591110-31591244)
chr7 (107-243)||(32758259-32758393)
chr7 (107-240)||(42798670-42798803)
chr7 (107-242)||(27629633-27629768)
chr7 (110-243)||(33871914-33872046)
chr7 (107-243)||(42391101-42391235)
chr7 (107-240)||(42805525-42805660)
chr7 (107-240)||(47716460-47716595)
chr7 (107-243)||(10693074-10693208)
chr7 (126-243)||(28362165-28362282)
chr7 (108-240)||(35334818-35334948)
chr7 (107-216)||(35787270-35787378)
chr7 (98-243)||(43557470-43557618)
chr7 (107-243)||(19265813-19265947)
chr7 (107-243)||(34626209-34626344)
chr7 (121-240)||(42101899-42102019)
chr7 (107-210)||(22698968-22699074)
chr7 (107-217)||(42476897-42477005)
chr7 (156-243)||(48123534-48123621)
chr7 (107-217)||(48735123-48735231)
chr7 (107-213)||(14099008-14099113)
chr7 (107-213)||(14409025-14409130)
chr7 (108-242)||(18512455-18512588)
chr7 (107-243)||(29907417-29907552)
chr7 (107-217)||(40463901-40464010)
chr7 (101-217)||(16341302-16341419)
chr7 (107-243)||(18747484-18747621)
chr7 (171-243)||(7644954-7645026)
chr7 (118-237)||(21566439-21566559)
chr7 (125-217)||(38604551-38604642)
chr7 (156-240)||(46354195-46354281)
chr7 (153-230)||(2662982-2663057)
chr7 (107-204)||(23618978-23619075)
chr7 (107-237)||(8148947-8149077)
chr7 (127-230)||(19266461-19266564)
chr7 (107-185)||(27889317-27889395)
chr7 (118-243)||(47077867-47077990)
chr7 (156-213)||(1408485-1408542)
chr7 (174-243)||(35203437-35203506)
chr7 (107-240)||(38262197-38262330)
chr7 (111-217)||(25198749-25198856)
chr7 (171-217)||(5180222-5180268)
chr7 (98-243)||(11741793-11741936)
chr7 (107-141)||(45018924-45018958)
chr7 (171-243)||(12473302-12473374)
chr7 (196-243)||(1524276-1524323)
chr7 (118-213)||(23231585-23231680)
chr7 (161-243)||(6736888-6736969)
chr7 (107-141)||(36602547-36602581)
chr7 (159-243)||(32233188-32233271)
chr7 (121-198)||(33500556-33500635)
[»] chr8 (52 HSPs)
chr8 (107-240)||(36720797-36720930)
chr8 (107-240)||(28817627-28817760)
chr8 (105-217)||(45071289-45071400)
chr8 (111-240)||(29521690-29521819)
chr8 (108-217)||(29877118-29877227)
chr8 (107-240)||(44530150-44530283)
chr8 (107-242)||(2626518-2626656)
chr8 (107-243)||(39460995-39461133)
chr8 (105-243)||(22598155-22598292)
chr8 (107-217)||(35261703-35261813)
chr8 (107-217)||(12625913-12626024)
chr8 (107-217)||(13160726-13160835)
chr8 (107-243)||(12670251-12670385)
chr8 (107-240)||(26954133-26954269)
chr8 (107-240)||(6760823-6760958)
chr8 (107-242)||(17823575-17823710)
chr8 (110-243)||(18164764-18164896)
chr8 (107-243)||(30454098-30454232)
chr8 (118-230)||(5689642-5689754)
chr8 (118-230)||(8483950-8484062)
chr8 (107-230)||(5135291-5135413)
chr8 (107-217)||(10857852-10857963)
chr8 (107-217)||(8897765-8897875)
chr8 (98-217)||(20869947-20870068)
chr8 (157-243)||(14018019-14018106)
chr8 (107-215)||(16225045-16225155)
chr8 (107-230)||(7136528-7136653)
chr8 (112-243)||(20284075-20284210)
chr8 (126-217)||(24365079-24365171)
chr8 (107-240)||(25250523-25250658)
chr8 (107-243)||(31457171-31457306)
chr8 (112-243)||(21070703-21070839)
chr8 (119-243)||(44781517-44781643)
chr8 (109-206)||(44742521-44742619)
chr8 (118-242)||(389642-389768)
chr8 (119-214)||(17250888-17250985)
chr8 (155-215)||(23286374-23286432)
chr8 (118-207)||(40604918-40605006)
chr8 (156-217)||(43942348-43942411)
chr8 (157-243)||(35105921-35106008)
chr8 (107-169)||(28407475-28407537)
chr8 (174-243)||(11748297-11748366)
chr8 (171-243)||(20869563-20869633)
chr8 (107-180)||(26102578-26102651)
chr8 (107-184)||(16013511-16013590)
chr8 (119-199)||(19729382-19729462)
chr8 (180-243)||(30962847-30962910)
chr8 (107-217)||(23000229-23000329)
chr8 (107-141)||(27468093-27468127)
chr8 (166-243)||(36918122-36918199)
chr8 (105-141)||(27508010-27508046)
chr8 (156-243)||(42083748-42083836)
[»] chr2 (54 HSPs)
chr2 (107-240)||(8455317-8455450)
chr2 (107-230)||(9671192-9671313)
chr2 (115-243)||(32781298-32781425)
chr2 (107-243)||(10543696-10543834)
chr2 (107-243)||(10546160-10546297)
chr2 (107-240)||(11514437-11514569)
chr2 (107-240)||(14444730-14444862)
chr2 (107-243)||(14530316-14530454)
chr2 (107-217)||(40762235-40762345)
chr2 (107-217)||(36871517-36871625)
chr2 (107-206)||(25632544-25632643)
chr2 (107-243)||(21779262-21779396)
chr2 (107-243)||(23397764-23397898)
chr2 (156-243)||(12023969-12024055)
chr2 (152-243)||(23145744-23145835)
chr2 (152-243)||(23557534-23557625)
chr2 (107-243)||(24200624-24200762)
chr2 (98-240)||(25249730-25249871)
chr2 (107-217)||(30826061-30826169)
chr2 (107-240)||(17668003-17668136)
chr2 (107-242)||(19977715-19977850)
chr2 (107-217)||(14544087-14544200)
chr2 (118-217)||(31158451-31158552)
chr2 (109-217)||(4516354-4516462)
chr2 (107-217)||(17896283-17896394)
chr2 (156-243)||(21377123-21377210)
chr2 (107-217)||(25079718-25079829)
chr2 (107-217)||(39914307-39914417)
chr2 (122-243)||(99281-99400)
chr2 (107-217)||(17623588-17623698)
chr2 (107-201)||(44643563-44643657)
chr2 (107-216)||(27573646-27573754)
chr2 (107-240)||(40416872-40417005)
chr2 (156-243)||(5450283-5450371)
chr2 (110-243)||(7214532-7214667)
chr2 (109-243)||(45235820-45235955)
chr2 (125-243)||(44521392-44521510)
chr2 (107-217)||(5841052-5841164)
chr2 (174-243)||(19614990-19615059)
chr2 (156-239)||(22371059-22371139)
chr2 (166-242)||(12315712-12315787)
chr2 (187-243)||(29419970-29420026)
chr2 (118-243)||(26684632-26684759)
chr2 (119-201)||(24890451-24890533)
chr2 (126-243)||(33795283-33795400)
chr2 (107-192)||(13245096-13245181)
chr2 (118-217)||(17471572-17471673)
chr2 (156-243)||(31821393-31821478)
chr2 (104-140)||(40579747-40579783)
chr2 (174-217)||(15296475-15296518)
chr2 (118-185)||(24860000-24860067)
chr2 (107-141)||(8575995-8576029)
chr2 (107-141)||(22371212-22371246)
chr2 (171-240)||(17705496-17705565)
[»] scaffold0049 (1 HSPs)
scaffold0049 (107-243)||(58975-59113)
[»] chr6 (37 HSPs)
chr6 (107-243)||(29355856-29355994)
chr6 (107-243)||(12221915-12222054)
chr6 (107-243)||(1354758-1354892)
chr6 (107-243)||(9161121-9161258)
chr6 (107-243)||(1346962-1347096)
chr6 (107-243)||(32728158-32728293)
chr6 (113-243)||(3815084-3815214)
chr6 (107-241)||(18277194-18277328)
chr6 (153-243)||(20400665-20400755)
chr6 (119-243)||(7947384-7947509)
chr6 (156-220)||(1941876-1941940)
chr6 (107-243)||(2166411-2166549)
chr6 (107-243)||(2178044-2178182)
chr6 (107-217)||(26097184-26097292)
chr6 (107-217)||(25557749-25557857)
chr6 (171-217)||(6024257-6024303)
chr6 (119-243)||(23240837-23240959)
chr6 (153-230)||(33138844-33138921)
chr6 (171-243)||(12889424-12889496)
chr6 (107-243)||(24097579-24097711)
chr6 (173-243)||(8409241-8409311)
chr6 (107-185)||(12885967-12886047)
chr6 (167-208)||(24751135-24751176)
chr6 (113-230)||(32579437-32579553)
chr6 (107-183)||(383761-383837)
chr6 (128-241)||(14553511-14553626)
chr6 (152-243)||(13905026-13905116)
chr6 (107-243)||(17432338-17432482)
chr6 (156-241)||(28007628-28007711)
chr6 (119-243)||(15866052-15866174)
chr6 (107-184)||(23930128-23930205)
chr6 (98-187)||(3116121-3116212)
chr6 (182-217)||(9671161-9671196)
chr6 (107-178)||(13267788-13267859)
chr6 (98-140)||(6808496-6808538)
chr6 (107-139)||(12892111-12892143)
chr6 (166-217)||(13628316-13628368)
[»] chr5 (44 HSPs)
chr5 (97-240)||(24448891-24449034)
chr5 (107-243)||(38879579-38879717)
chr5 (107-216)||(16880648-16880757)
chr5 (107-243)||(32703422-32703556)
chr5 (107-243)||(28516434-28516571)
chr5 (107-240)||(41014320-41014452)
chr5 (120-243)||(27328750-27328875)
chr5 (107-240)||(4619105-4619240)
chr5 (107-242)||(8169985-8170118)
chr5 (107-243)||(43334200-43334338)
chr5 (107-217)||(7097761-7097870)
chr5 (107-214)||(13801768-13801877)
chr5 (107-243)||(35710311-35710445)
chr5 (119-235)||(19142956-19143071)
chr5 (118-210)||(43574637-43574729)
chr5 (107-217)||(29334419-29334530)
chr5 (110-217)||(30006349-30006456)
chr5 (109-217)||(7368422-7368528)
chr5 (107-217)||(20135628-20135740)
chr5 (107-243)||(22187283-22187421)
chr5 (106-217)||(12006328-12006441)
chr5 (107-181)||(16957374-16957448)
chr5 (129-217)||(2838803-2838890)
chr5 (107-195)||(34154815-34154903)
chr5 (171-243)||(42924899-42924971)
chr5 (164-243)||(34074620-34074699)
chr5 (152-240)||(1405188-1405276)
chr5 (110-166)||(39801591-39801647)
chr5 (157-216)||(36770806-36770864)
chr5 (156-207)||(41425982-41426033)
chr5 (156-241)||(208977-209062)
chr5 (126-207)||(22600488-22600569)
chr5 (156-217)||(22907915-22907975)
chr5 (100-141)||(29184055-29184096)
chr5 (187-243)||(22025541-22025597)
chr5 (176-243)||(37024626-37024691)
chr5 (126-217)||(24323725-24323816)
chr5 (126-217)||(24360349-24360440)
chr5 (105-139)||(19438768-19438802)
chr5 (107-205)||(31694109-31694207)
chr5 (118-199)||(9794390-9794471)
chr5 (156-217)||(24903746-24903807)
chr5 (107-168)||(25622533-25622594)
chr5 (107-140)||(32354228-32354261)
[»] chr4 (73 HSPs)
chr4 (107-217)||(20639659-20639770)
chr4 (105-243)||(6430625-6430762)
chr4 (109-243)||(17043398-17043531)
chr4 (107-217)||(14983858-14983968)
chr4 (107-217)||(25629073-25629183)
chr4 (107-240)||(5648260-5648392)
chr4 (107-240)||(16408602-16408737)
chr4 (107-243)||(44363131-44363269)
chr4 (107-242)||(47443956-47444091)
chr4 (109-240)||(21646965-21647098)
chr4 (118-220)||(51865050-51865152)
chr4 (107-243)||(47528531-47528665)
chr4 (107-243)||(48598826-48598960)
chr4 (107-243)||(30639378-30639513)
chr4 (104-240)||(40915830-40915965)
chr4 (107-215)||(23501813-23501923)
chr4 (107-243)||(9832314-9832448)
chr4 (107-243)||(11054149-11054283)
chr4 (118-243)||(19027846-19027971)
chr4 (107-243)||(20224982-20225116)
chr4 (108-243)||(29207900-29208033)
chr4 (107-243)||(35567168-35567304)
chr4 (107-202)||(30690177-30690272)
chr4 (120-243)||(37494849-37494972)
chr4 (107-243)||(5306661-5306800)
chr4 (107-209)||(12711450-12711553)
chr4 (107-217)||(20405110-20405223)
chr4 (107-217)||(16911586-16911698)
chr4 (106-217)||(7909280-7909391)
chr4 (106-230)||(8473620-8473744)
chr4 (106-217)||(21489111-21489223)
chr4 (115-243)||(25463120-25463247)
chr4 (107-217)||(54175088-54175199)
chr4 (118-217)||(9987846-9987945)
chr4 (107-198)||(55766467-55766558)
chr4 (107-198)||(55830722-55830813)
chr4 (107-213)||(13256400-13256508)
chr4 (152-209)||(17079697-17079754)
chr4 (157-217)||(39029111-39029172)
chr4 (171-243)||(7038051-7038122)
chr4 (119-243)||(41018807-41018930)
chr4 (152-243)||(7385522-7385613)
chr4 (127-217)||(49796822-49796911)
chr4 (109-243)||(54967019-54967151)
chr4 (159-243)||(487187-487272)
chr4 (107-196)||(20225119-20225210)
chr4 (107-202)||(20908637-20908733)
chr4 (171-239)||(25343189-25343257)
chr4 (157-210)||(48327814-48327869)
chr4 (110-243)||(39077800-39077931)
chr4 (156-243)||(47441580-47441667)
chr4 (124-243)||(49938611-49938727)
chr4 (157-217)||(14590861-14590922)
chr4 (107-185)||(30352581-30352661)
chr4 (107-168)||(38755909-38755970)
chr4 (156-230)||(30581515-30581591)
chr4 (98-141)||(35532092-35532135)
chr4 (107-197)||(2813169-2813262)
chr4 (107-141)||(11394952-11394986)
chr4 (107-141)||(11404679-11404713)
chr4 (179-213)||(23580281-23580315)
chr4 (158-243)||(30496374-30496457)
chr4 (107-177)||(38786673-38786743)
chr4 (107-141)||(40553938-40553972)
chr4 (171-217)||(51420598-51420644)
chr4 (107-168)||(33836488-33836549)
chr4 (107-230)||(10277758-10277879)
chr4 (122-199)||(16494259-16494338)
chr4 (107-239)||(32478793-32478918)
chr4 (107-139)||(32484335-32484367)
chr4 (156-207)||(35894511-35894563)
chr4 (107-167)||(44718641-44718701)
chr4 (107-139)||(56323002-56323034)
[»] scaffold0057 (4 HSPs)
scaffold0057 (98-216)||(24764-24882)
scaffold0057 (107-217)||(46855-46965)
scaffold0057 (119-217)||(43683-43780)
scaffold0057 (109-169)||(46710-46770)
[»] scaffold0258 (1 HSPs)
scaffold0258 (107-243)||(13025-13160)
[»] scaffold0168 (1 HSPs)
scaffold0168 (107-243)||(30577-30711)
[»] scaffold0015 (1 HSPs)
scaffold0015 (107-230)||(48635-48756)
[»] scaffold0311 (1 HSPs)
scaffold0311 (119-217)||(10834-10932)
[»] scaffold0018 (1 HSPs)
scaffold0018 (107-210)||(72868-72971)
[»] scaffold0223 (1 HSPs)
scaffold0223 (107-243)||(11129-11263)
[»] scaffold0187 (2 HSPs)
scaffold0187 (108-243)||(10052-10185)
scaffold0187 (108-243)||(20380-20513)
[»] scaffold1176 (1 HSPs)
scaffold1176 (110-243)||(1591-1722)
[»] scaffold0036 (1 HSPs)
scaffold0036 (152-240)||(35063-35152)
[»] scaffold0167 (1 HSPs)
scaffold0167 (126-230)||(23610-23714)
[»] scaffold0180 (1 HSPs)
scaffold0180 (107-193)||(24134-24220)
[»] scaffold0028 (1 HSPs)
scaffold0028 (151-211)||(32960-33021)
[»] scaffold0005 (1 HSPs)
scaffold0005 (157-217)||(226456-226517)
[»] scaffold0254 (1 HSPs)
scaffold0254 (171-243)||(4155-4227)
[»] scaffold0954 (1 HSPs)
scaffold0954 (118-213)||(3572-3667)
[»] scaffold0194 (1 HSPs)
scaffold0194 (97-193)||(24696-24792)


Alignment Details
Target: chr3 (Bit Score: 194; Significance: 1e-105; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 33235792 - 33235545
Alignment:
Q  1 caacatatccactcactgttactttctgctgcttcaagtccacgtccactttcttagctcctgttcaaatttcaaattaatttccaataaatgaactaaa 100  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33235792 caacatatccactcaccgttactttctgctgcttcaagtccacatccactttcttagctcctgttcaaatttcaa-ttaatttccaataaatgaactaaa 33235694  T
Q  101 aacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctg-tttt 199  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||| | |||||||||||||||||||||||||| ||||||||||||| ||||    
T  33235693 aacaataagggcaacctggtgcactaaagcttccgcatacgtaaggtctgcg-aggggtcccaccatttagtgtattgtacacagtcttaccctgttttt 33235595  T
Q  200 ttacacaagaggctgtttacacgatttgaacttgtgacctttcatctcac 249  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  33235594 ttacacaagaggctctttacacgatttgaacttgtgacctttcatgtcac 33235545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 107 - 242
Target Start/End: Original strand, 12914036 - 12914171
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| |||||| | ||||||||||||| | | || ||| ||| ||||| |||||||| ||||||||||||| | ||||||||||||||||||||    
T  12914036 aagggcaacccggtgcattgaagctcccgcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgccgccttaccctgttttttacaca 12914135  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttc 242  Q
    ||||||||||| || || ||||||||||||||||||    
T  12914136 agaggctgtttccaggacttgaacttgtgacctttc 12914171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 107 - 230
Target Start/End: Original strand, 40272813 - 40272936
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  40272813 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacaca 40272912  T
Q  207 agaggctgtttacacgatttgaac 230  Q
    ||||| ||||| || || ||||||    
T  40272913 agaggttgtttccaggacttgaac 40272936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 118 - 230
Target Start/End: Original strand, 6411834 - 6411945
Alignment:
Q  118 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    |||||||||||||||||||||||| |||| ||| ||| |||||||| ||||| ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  6411834 ggtgcactaaagctcccgcatacgcaaggtctgggaaggggtcccatcatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgttt 6411932  T
Q  218 acacgatttgaac 230  Q
    ||| || ||||||    
T  6411933 acaagacttgaac 6411945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 106 - 230
Target Start/End: Complemental strand, 22609922 - 22609799
Alignment:
Q  106 taagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacac 205  Q
    ||||||||||| |||||||| ||||||||||||||| |||| | | ||| |||||||||||||| ||||||||||||||| |||||||||| ||||||||    
T  22609922 taagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacac 22609824  T
Q  206 aagaggctgtttacacgatttgaac 230  Q
    |||||||||||| || || ||||||    
T  22609823 aagaggctgtttccaagacttgaac 22609799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 13628791 - 13628929
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||  | ||||||||||||||| |||||||||||| |||||    
T  13628791 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttaca 13628890  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||||| || || ||||||  |||||||||||    
T  13628891 caagaggctgtttccaggacttgaacccgtgacctttca 13628929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 39203670 - 39203536
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| |||||||||||||||||||||| | |||| | | ||| |||||||||||||| ||||||||||||||  |||||||||  |||||||||    
T  39203670 aagggcaacccggtgcactaaagctcccgcatatgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg--ttttacaca 39203573  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||||||  | || |||||| ||||||||||||    
T  39203572 agaggctgtttcaaggacttgaacctgtgacctttca 39203536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 26869862 - 26869727
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||| |||||||||||||||| | || | |  || |||||||||||||| ||||||||||||||| |||||||||| ||||||||     
T  26869862 aagggcaacccggtgcaccaaagctcccgcatacgcatggtccggcaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacc 26869764  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||| || || |||||| ||||||||||||    
T  26869763 agaggctgtttccaggacttgaacctgtgacctttca 26869727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 31904856 - 31904968
Alignment:
Q  106 taagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaaggg-tcccaccatttagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||| ||||||||||||||||||||||| |||||||  ||| ||| ||| ||||||||||| ||||||||||||||||| ||||||||||||||||    
T  31904856 taagggcagcctggtgcactaaagctcccgcacacgtaagatctgggaagggggtcccaccatttggtgtattgtacgcagtcataccctgttttttaca 31904955  T
Q  205 caagaggctgttt 217  Q
     || |||||||||    
T  31904956 taataggctgttt 31904968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 243
Target Start/End: Complemental strand, 26573282 - 26573147
Alignment:
Q  108 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaa 207  Q
    |||||| |||||||||||||||||| |||||||| | || | | ||  ||||||||||| || ||||||||||||||| ||||||||||||||||||||     
T  26573282 agggcagcctggtgcactaaagctcacgcatacgcagggtccgggatggggtcccaccaattggtgtattgtacgcagccttaccctgttttttacacag 26573183  T
Q  208 gaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||||| || || ||||||  |||||||||||    
T  26573182 gaggctgtttccaggacttgaacccgtgacctttca 26573147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 54484847 - 54484736
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacac 205  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||| |||||| || ||||||||||    
T  54484847 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgtttttttacac 54484748  T
Q  206 aagaggctgttt 217  Q
    ||||||||||||    
T  54484747 aagaggctgttt 54484736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 230
Target Start/End: Complemental strand, 14987115 - 14986990
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    ||||| |||| |||||||||||||||||||||| | |||| | | ||| |||||||||||||  | ||||||||||||||| ||||||||||||||||||    
T  14987115 aagggaaacccggtgcactaaagctcccgcatatgcaaggtccgggaatgggtcccaccattattggtgtattgtacgcagccttaccctgttttttaca 14987016  T
Q  205 caagaggctgtttacacgatttgaac 230  Q
    ||||||||||||| || || ||||||    
T  14987015 caagaggctgtttccaggacttgaac 14986990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 119 - 243
Target Start/End: Original strand, 34420656 - 34420781
Alignment:
Q  119 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    |||||||||||||||| |||||| |||| | | ||| |||||||||||||| | ||||| |||||||| |||||||||||||||||||||||||||||||    
T  34420656 gtgcactaaagctcccacatacgcaaggtccgggaaggggtcccaccattttggtgtatggtacgcagccttaccctgttttttacacaagaggctgttt 34420755  T
Q  218 acacgatttgaacttgtgacctttca 243  Q
     || || ||||||  |||||||||||    
T  34420756 ccaggacttgaacccgtgacctttca 34420781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 107 - 230
Target Start/End: Original strand, 10795424 - 10795549
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttaca 204  Q
    ||||||||||||||||||| ||||||||||||||| | || |   ||| ||||||||||||||   ||||||||||||||| |||||||||| |||||||    
T  10795424 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttaca 10795523  T
Q  205 caagaggctgtttacacgatttgaac 230  Q
    ||||||||||||| || || ||||||    
T  10795524 caagaggctgtttccaggacttgaac 10795549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 107 - 241
Target Start/End: Original strand, 46421035 - 46421172
Alignment:
Q  107 aagggcaacctggtgcact-aaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttac 203  Q
    |||||||| | |||||||| |||||||||||||||| | || | | ||| |||||||||||||  | ||||||||||||||| |||||||||||||||||    
T  46421035 aagggcaaaccggtgcacttaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttac 46421134  T
Q  204 acaagaggctgtttacacgatttgaacttgtgaccttt 241  Q
    |||||||||||||| || || ||||||  |||||||||    
T  46421135 acaagaggctgtttccaggacttgaacccgtgaccttt 46421172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 516568 - 516429
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtg---tattgtacgcagtcttaccctgttttttac 203  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| ||||||| ||||||  ||   |||||| ||||| |||||||||||||||||    
T  516568 aagggcaacccggtgcactaaagctcccgcatacgcagggtcggggaaggggtcccgccattttttggtttattgtgcgcagccttaccctgttttttac 516469  T
Q  204 acaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||||||||| || || ||||||  |||||||||||    
T  516468 acaagaggctgtttccaggacttgaacccgtgacctttca 516429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 1217244 - 1217110
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| ||||||| |||||| ||||||||||||||| |||||||||  |||||||||    
T  1217244 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccgccatttggtgtattgtacgcagccttaccctg--ttttacaca 1217147  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||| || || ||||||  |||||||||||    
T  1217146 agaggctgtttccaggacttgaacccgtgacctttca 1217110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 241
Target Start/End: Original strand, 29366721 - 29366857
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    ||||||||||  |||||||||||||||| |||||| | || | | ||| |||||||||||||  | ||||||||||||||| |||||||||||||||| |    
T  29366721 aagggcaacccagtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttata 29366820  T
Q  205 caagaggctgtttacacgatttgaacttgtgaccttt 241  Q
    ||||||||||||| || || ||||||  |||||||||    
T  29366821 caagaggctgtttccaggacttgaacccgtgaccttt 29366857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 217
Target Start/End: Original strand, 45786215 - 45786327
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||| |||||||||||||||| |||| || | || | | ||| ||||||||||||||   ||||||||||||||| ||||||||||||||||||    
T  45786215 aagggcaacccggtgcactaaagctccagcattcgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttaca 45786314  T
Q  205 caagaggctgttt 217  Q
    |||||||||||||    
T  45786315 caagaggctgttt 45786327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 53996566 - 53996703
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacac 205  Q
    ||||||| || ||||||||||||||||| |||||| |  | | | ||| |||||||||||||| | ||||||||| |||| |||||||||||||||||||    
T  53996566 aagggcagcccggtgcactaaagctcccacatacgcagtgtcagggaaggggtcccaccattttggtgtattgtaagcagccttaccctgttttttacac 53996665  T
Q  206 aagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||| ||||| ||||| ||||||  |||||||||||    
T  53996666 aagaggttgtttccacgacttgaacacgtgacctttca 53996703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 55401314 - 55401209
Alignment:
Q  126 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgat 224  Q
    |||||||||||||||| |||| | | ||| |||||||||||||| | |||||| |||||||||||| ||||||||||||||||||||||||||||| ||     
T  55401314 aaagctcccgcatacggaaggtccgagaaggggtcccaccattttggtgtattatacgcagtcttaacctgttttttacacaagaggctgtttacaggac 55401215  T
Q  225 ttgaac 230  Q
    ||||||    
T  55401214 ttgaac 55401209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 7943143 - 7943036
Alignment:
Q  110 ggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaaggg-tcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaag 208  Q
    |||||||  ||||||||||||||||||||||| | || ||| ||||||| |||||||||||  ||||||||||||||||||||||||||||||| |||||    
T  7943143 ggcaacccagtgcactaaagctcccgcatacgcatggtctg-gaaagggatcccaccatttgatgtattgtacgcagtcttaccctgttttttagacaag 7943045  T
Q  209 aggctgttt 217  Q
    | |||||||    
T  7943044 atgctgttt 7943036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 107 - 240
Target Start/End: Original strand, 13730603 - 13730738
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||| |||||||||||||||||||||| |   || | | ||| |||||||||||||  | ||||||||||| ||| ||||||||||||||||||    
T  13730603 aagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttaca 13730702  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctt 240  Q
    ||||||||||||| || || ||||||  ||||||||    
T  13730703 caagaggctgtttccaggacttgaacccgtgacctt 13730738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 118 - 240
Target Start/End: Original strand, 45948850 - 45948972
Alignment:
Q  118 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    |||||||||||||||||||||||| | || | | ||| ||||||||||| || |||||||||| |||| |||||||| |||||||||||||||| |||||    
T  45948850 ggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccaattggtgtattgtatgcagccttaccctattttttacacaagaggttgttt 45948949  T
Q  218 acacgatttgaacttgtgacctt 240  Q
     || || ||||||  ||||||||    
T  45948950 ccaggaattgaacccgtgacctt 45948972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 243
Target Start/End: Original strand, 54374349 - 54374483
Alignment:
Q  110 ggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaag 208  Q
    |||| ||||||| ||||||||||||||||| | | || | | ||| |||||||||||||| | || ||||||||||| |||||||| |||||||||||||    
T  54374349 ggcagcctggtgaactaaagctcccgcatatgcagggtccgggaaggggtcccaccattttggtggattgtacgcagccttaccctattttttacacaag 54374448  T
Q  209 aggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||| ||||| || || |||||| ||||||||||||    
T  54374449 aggttgtttccaagacttgaacctgtgacctttca 54374483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 217
Target Start/End: Original strand, 49013474 - 49013586
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||| ||||||||||||||||||| || |   || | | ||| |||||||||||||  | ||||||||||||||| ||||||||||||||||||    
T  49013474 aagggcaacccggtgcactaaagctcccgcgtatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttaca 49013573  T
Q  205 caagaggctgttt 217  Q
    |||||||||||||    
T  49013574 caagaggctgttt 49013586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 243
Target Start/End: Original strand, 22122915 - 22123052
Alignment:
Q  104 aataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttac 203  Q
    ||||||||||||| ||||||||| ||||| |||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  ||||||    
T  22122915 aataagggcaacccggtgcactagagctctcgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttac 22123012  T
Q  204 acaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||| |||||| || || ||||||  | |||||||||    
T  22123013 acaagagactgtttccaggacttgaacccgcgacctttca 22123052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 230
Target Start/End: Complemental strand, 31593003 - 31592882
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| | |||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  31593003 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggagtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 31592906  T
Q  207 agaggctgtttacacgatttgaac 230  Q
    ||||||||||| || || ||||||    
T  31592905 agaggctgtttccaggacttgaac 31592882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 243
Target Start/End: Original strand, 8247688 - 8247826
Alignment:
Q  108 agggcaacctggtgcact-aaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||  ||||||| |||||||||||||||| | || | | ||| | |||||||||||  | ||||||||||||||  ||||||||||||||||||    
T  8247688 agggcaacccagtgcacttaaagctcccgcatacgcagggtccgggaaggagtcccaccattattggtgtattgtacgcaaccttaccctgttttttaca 8247787  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||||| || || ||||||  |||||||||||    
T  8247788 caagaggctgtttccaggacttgaacccgtgacctttca 8247826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 4495713 - 4495798
Alignment:
Q  155 agggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctt 240  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||| ||| || || ||||||  ||||||||    
T  4495713 agggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaataggctattttcaggacttgaacccgtgacctt 4495798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 214
Target Start/End: Complemental strand, 9276401 - 9276313
Alignment:
Q  125 taaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctg 214  Q
    ||||| ||||||||||| | || | | |||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  9276401 taaagttcccgcatacgcagggtccgggaaagggtcc-accatttggtgtattgtacgcagccttaccctgttttttacacaagaggctg 9276313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 107 - 214
Target Start/End: Complemental strand, 15797376 - 15797271
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||| ||||||| |||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  15797376 aagggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 15797279  T
Q  207 agaggctg 214  Q
    ||||||||    
T  15797278 agaggctg 15797271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 31672851 - 31672739
Alignment:
Q  106 taagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaa-agggtcccaccatttagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    ||||| || ||||||||||||||||||||||| |||||||   || ||| || |||||||||||| |||||||||||||| |||| || |||||||||||    
T  31672851 taaggacagcctggtgcactaaagctcccgcacacgtaagatatgggaagagagtcccaccatttggtgtattgtacgcactcttgccttgttttttaca 31672752  T
Q  205 caagaggctgttt 217  Q
     || |||||||||    
T  31672751 taataggctgttt 31672739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 47624148 - 47624088
Alignment:
Q  156 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    |||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  47624148 gggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgttt 47624088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 54032608 - 54032693
Alignment:
Q  155 agggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctt 240  Q
    ||||||||||||||  |||||||||| |||| ||||||||||||||||||||||||| ||||| || || ||||||  ||||||||    
T  54032608 agggtcccaccattcggtgtattgtatgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgacctt 54032693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 353351 - 353450
Alignment:
Q  108 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttacac 205  Q
    ||||||||| |||||||||||||||||||||| |   || | | ||| |||||||||||||  | ||||||||||||||| |||||||||||||||||||    
T  353351 agggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacac 353450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 107 - 199
Target Start/End: Original strand, 34771365 - 34771457
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttt 199  Q
    ||||||| || ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||||||    
T  34771365 aagggcagcccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 34771457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 19731147 - 19731052
Alignment:
Q  118 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggct 213  Q
    |||||||||||||||| ||||||  |  | ||| ||||||||||||||| |  ||||||||||||||  |||||| ||||||||||||||||||||    
T  19731147 ggtgcactaaagctcctgcatacacagagtctgggaaagggtcccaccaataggtgtattgtacgcaaccttaccttgttttttacacaagaggct 19731052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 217
Target Start/End: Original strand, 25517171 - 25517282
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacac 205  Q
    |||||||||| |||||||||||||||| ||||||| | |  | | ||| |||||||||||||| ||||||||||||||| | || | || ||||||||||    
T  25517171 aagggcaacccggtgcactaaagctccagcatacgcaggatccgggaaggggtcccaccattttgtgtattgtacgcagccatatcttgtttttttacac 25517270  T
Q  206 aagaggctgttt 217  Q
    |||||| |||||    
T  25517271 aagaggatgttt 25517282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 16735596 - 16735487
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    ||||||||||  ||||||| ||||| ||||||||| |  | | | ||| |||||||||||||| ||||||||||||||| |||||||||| ||||  |||    
T  16735596 aagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttctaca 16735498  T
Q  207 agaggctgttt 217  Q
    |||||||||||    
T  16735497 agaggctgttt 16735487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 24578081 - 24578007
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtac 181  Q
    |||||||||| ||||||||| || ||||||||| ||| || ||| ||||| ||||||||||||||||||||||||    
T  24578081 aagggcaacccggtgcactagagttcccgcatatgtagggtctgggaaagagtcccaccatttagtgtattgtac 24578007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 25944626 - 25944489
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca-tttagtgtattgtacgcagtcttaccctgttttttacac 205  Q
    ||||||| |||||||| ||||||||||| |||||| | || | | ||| ||||||||||| ||| ||||||||||| ||| ||| ||| |||||||||||    
T  25944626 aagggcagcctggtgcgctaaagctcccacatacgcagggtcagggaaggggtcccaccattttggtgtattgtactcagccttgcccagttttttacac 25944527  T
Q  206 aagaggctgtttacacgatttgaacttgtgacctttca 243  Q
     |||||| |||| || || ||||||   ||||||||||    
T  25944526 gagaggcggtttccaggacttgaacccatgacctttca 25944489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 43114882 - 43114995
Alignment:
Q  120 tgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtc-ttaccctgtttt-ttacacaagaggctgttt 217  Q
    |||||||||||||||||||||| | |||    | |||||||||||||||| |||||||||| | || | |||||||||||| ||||||||||||||||||    
T  43114882 tgcactaaagctcccgcatacgcaggggtccaggaagggtcccaccatttggtgtattgtaggtagcccttaccctgtttttttacacaagaggctgttt 43114981  T
Q  218 acacgatttgaact 231  Q
     || || |||||||    
T  43114982 ccaggacttgaact 43114995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 45620881 - 45620966
Alignment:
Q  159 tcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||| ||  | ||||||  |||||||||||    
T  45620881 tcccaccaattggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccagaacttgaacccgtgacctttca 45620966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 191
Target Start/End: Original strand, 52926220 - 52926304
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttac 191  Q
    |||||||||| ||||| |||||||||||||||||| | || | | ||| | |||||||||||| ||||||||||||||| |||||    
T  52926220 aagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaaggtgtcccaccatttggtgtattgtacgcagccttac 52926304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 5173720 - 5173857
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca--tttagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||| |||||||||||||||||||||||| |||| | | ||| ||| |||||||  ||| |||||||| | |||  |||||  || ||||||||    
T  5173720 aagggcaacccggtgcactaaagctcccgcatacgcaaggtccgggaaggggccccaccatttttggtgtattgcatgcaaccttactttg-tttttaca 5173818  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||| ||||| || || ||||||  |||||||||||    
T  5173819 caagaggttgtttccaggacttgaacccgtgacctttca 5173857  T

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Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 243
Target Start/End: Complemental strand, 9607345 - 9607223
Alignment:
Q  123 actaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttaca 220  Q
    ||||||||||||||||| |   || ||| ||| |||||||| ||||  | ||||||| ||||||| ||||||||||||||||| ||||||||||||| ||    
T  9607345 actaaagctcccgcatatgcggggtctgggaaggggtcccaacattattggtgtattctacgcagccttaccctgttttttacgcaagaggctgtttcca 9607246  T
Q  221 cgatttgaacttgtgacctttca 243  Q
     || ||||||   ||||||||||    
T  9607245 ggacttgaaccgatgacctttca 9607223  T

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Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 19751723 - 19751628
Alignment:
Q  118 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggct 213  Q
    |||||||||||||||  ||||||  || | ||| ||||||||||||||| |  ||||||||||||||  |||||| || |||||||||||||||||    
T  19751723 ggtgcactaaagctcatgcatacacaaagtctgggaaagggtcccaccaataggtgtattgtacgcaaccttaccttgatttttacacaagaggct 19751628  T

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Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 45139479 - 45139615
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttaca 204  Q
    ||||||| || ||||||| |||| ||||||||||| | || ||| ||| ||||||||||||||   |||||||||| |||| |||||||||| |||||||    
T  45139479 aagggcagcccggtgcac-aaagttcccgcatacgca-ggtctgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgtgttttaca 45139576  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||| ||||| ||  | ||||||  |||||||||||    
T  45139577 caagaggttgtttccaaaacttgaacccgtgacctttca 45139615  T

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Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 52428527 - 52428585
Alignment:
Q  156 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctg 214  Q
    |||| |||| |||| ||||||||||||||| |||||||||| |||||||||||||||||    
T  52428527 gggttccactatttggtgtattgtacgcagccttaccctgtattttacacaagaggctg 52428585  T

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Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 35417988 - 35417940
Alignment:
Q  191 ccctgttttttacacaagaggctgtttacacgatttgaacttgtgacct 239  Q
    ||||||||||||||||||||||||||| || |||||||||| |||||||    
T  35417988 ccctgttttttacacaagaggctgtttccaggatttgaactcgtgacct 35417940  T

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Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 44403567 - 44403663
Alignment:
Q  118 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagt-gtattgtacgcagtcttaccctgttttttacacaagaggct 213  Q
    |||||||||||||| | ||||||||| || | | ||| |||||||||||||| || ||||| | ||||| |||||| ||| ||||||||||||||||    
T  44403567 ggtgcactaaagcttcagcatacgtagggtccgggaaggggtcccaccattttgtggtattctccgcagccttaccttgtcttttacacaagaggct 44403663  T

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Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 30928197 - 30928284
Alignment:
Q  156 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||| ||| || ||||||| ||| ||  |||||| |||||||||||||||||||||||| || || ||||||  |||||||||||    
T  30928197 gggtcccgccaattggtgtattttacacaaccttaccttgttttttacacaagaggctgtttccaggacttgaacccgtgacctttca 30928284  T

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Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 145
Target Start/End: Original strand, 31922839 - 31922878
Alignment:
Q  106 taagggcaacctggtgcactaaagctcccgcatacgtaag 145  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  31922839 taagggcagcctggtgcactaaagctcccgcatacgtaag 31922878  T

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Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 241
Target Start/End: Original strand, 7696945 - 7697020
Alignment:
Q  164 ccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgaccttt 241  Q
    |||||| ||||||||||||||| |||||||||  ||||||||||||| |||||| || || ||||||  |||||||||    
T  7696945 ccatttggtgtattgtacgcagccttaccctg--ttttacacaagagactgtttccaggacttgaacccgtgaccttt 7697020  T

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Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 12525489 - 12525427
Alignment:
Q  181 cgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||| ||||||||| ||||||||||||||||||||| || || | |||| ||||||||||||    
T  12525489 cgcagccttaccctgatttttacacaagaggctgtttccaggactcgaacctgtgacctttca 12525427  T

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Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 24577991 - 24577917
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtac 181  Q
    |||||||| | ||||||||| |||||||| ||| | | || ||| |||||| |||||||||||||||||||||||    
T  24577991 aagggcaatccggtgcactagagctcccgtatatgcagggtctgggaaaggatcccaccatttagtgtattgtac 24577917  T

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Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 21875111 - 21875046
Alignment:
Q  166 atttagtgtattgtacgcagtcttaccctgtttttt-acacaagaggctgtttacacgatttgaac 230  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||| ||||| ||  ||||||||    
T  21875111 atttagtgtattgtacgcagccttaccctcttttttaacacaagaggttgtttccagaatttgaac 21875046  T

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Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 10870025 - 10870088
Alignment:
Q  179 tacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||| ||||||||||||| ||||||||||||||||| || || ||||||  |||||||||||    
T  10870025 tacgcagccttaccctgtttt-tacacaagaggctgtttccaggacttgaacccgtgacctttca 10870088  T

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Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 33926190 - 33926103
Alignment:
Q  156 gggtcccaccatt-tagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||||| | ||||||||||| ||| |||||||||| |||||||||||||||| ||| || || ||||||   ||||||||||    
T  33926190 gggtcccaccattatggtgtattgtacacagccttaccctgt-ttttacacaagaggctatttccaggacttgaacccatgacctttca 33926103  T

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Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 211
Target Start/End: Complemental strand, 39212081 - 39212042
Alignment:
Q  172 tgtattgtacgcagtcttaccctgttttttacacaagagg 211  Q
    ||||||||||||||||||||| |||| |||||||||||||    
T  39212081 tgtattgtacgcagtcttaccttgttatttacacaagagg 39212042  T

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Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 47624264 - 47624221
Alignment:
Q  98 aaaaacaataagggcaacctggtgcactaaagctcccgcatacg 141  Q
    ||||| || |||||||||| ||||||||||||||||||||||||    
T  47624264 aaaaaaaaaaagggcaacccggtgcactaaagctcccgcatacg 47624221  T

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Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 141
Target Start/End: Original strand, 4495677 - 4495711
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacg 141  Q
    |||||||||| ||||||||||||||||||||||||    
T  4495677 aagggcaacccggtgcactaaagctcccgcatacg 4495711  T

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Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 141
Target Start/End: Original strand, 10484617 - 10484651
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacg 141  Q
    |||||||||| ||||||||||||||||||||||||    
T  10484617 aagggcaacccggtgcactaaagctcccgcatacg 10484651  T

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Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 141
Target Start/End: Complemental strand, 40390397 - 40390363
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacg 141  Q
    |||||||||| ||||||||||||||||||||||||    
T  40390397 aagggcaacccggtgcactaaagctcccgcatacg 40390363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 141
Target Start/End: Original strand, 54032572 - 54032606
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacg 141  Q
    |||||||||| ||||||||||||||||||||||||    
T  54032572 aagggcaacccggtgcactaaagctcccgcatacg 54032606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 8410918 - 8410966
Alignment:
Q  157 ggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacac 205  Q
    |||||||||| || |||||||||  |||| |||||||||||||||||||    
T  8410918 ggtcccaccagttggtgtattgtgagcagccttaccctgttttttacac 8410966  T

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Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 139
Target Start/End: Original strand, 24851302 - 24851334
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcata 139  Q
    |||||||||| ||||||||||||||||||||||    
T  24851302 aagggcaacccggtgcactaaagctcccgcata 24851334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 52952592 - 52952532
Alignment:
Q  157 ggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    |||||||| |||| ||||||||||| |||||||| | | ||||||||| |||||| |||||    
T  52952592 ggtcccactatttggtgtattgtacacagtcttatcatattttttacataagaggttgttt 52952532  T

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Target: chr1 (Bit Score: 77; Significance: 8e-36; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 46247954 - 46248090
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||| |||||||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  46247954 aagggcaacccggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacaca 46248053  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||| || || ||||||  ||||| |||||    
T  46248054 agaggctgtttccaagacttgaacccgtgacatttca 46248090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 120 - 240
Target Start/End: Original strand, 23768334 - 23768454
Alignment:
Q  120 tgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttac 219  Q
    |||||||||||||||||||||| | || ||| ||| | |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  23768334 tgcactaaagctcccgcatacgcagggtctgggaaggtgtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttcc 23768433  T
Q  220 acgatttgaacttgtgacctt 240  Q
    | || |||||| |||||||||    
T  23768434 atgacttgaacctgtgacctt 23768454  T

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Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 34725099 - 34725233
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||||||||||||||||||| |||||||||  |||||||||    
T  34725099 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttagtgtattgtacgcagccttaccctg--ttttacaca 34725196  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||| || || ||||||  |||||||||||    
T  34725197 agaggctgtttccaggacttgaacccgtgacctttca 34725233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 18944803 - 18944664
Alignment:
Q  107 aagggcaacctggtgcactaaa-gctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttac 203  Q
    |||||||||| ||||||||||| ||||||||||||| | || | | ||| |||||||||||||  | ||||||||||||||| |||||||||||||||||    
T  18944803 aagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggtgtattgtacgcagccttaccctgttttttac 18944704  T
Q  204 acaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||||||||| || |  |||||| ||||||||||||    
T  18944703 acaagaggctgtttccaggccttgaacctgtgacctttca 18944664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 32632558 - 32632693
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    ||||| ||||||||||||| ||||||||||||| | | ||  || ||| |||||||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  32632558 aagggaaacctggtgcactcaagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacaca 32632656  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||| || || ||||||  |||||||||||    
T  32632657 agaggctgtttccaggacttgaacccgtgacctttca 32632693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 10668384 - 10668246
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||  | ||||||||||||||  |||||| |||||||||||    
T  10668384 aagggcaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccttgttttttaca 10668285  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||||| || || ||||||  |||||||||||    
T  10668284 caagaggctgtttccaggacttgaacccgtgacctttca 10668246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 35005282 - 35005144
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||| ||||||||||||| |||||||||| | || | | ||| ||||||||||||||   |||||||||| |||| ||||||||||||||||||    
T  35005282 aagggcaacccggtgcactaaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgttttttaca 35005183  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||||| || || ||||||  |||||||||||    
T  35005182 caagaggctgttttcaagacttgaacccgtgacctttca 35005144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 4349795 - 4349699
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttac 203  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||| |||||||||||||||||    
T  4349795 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttac 4349699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 14617195 - 14617059
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    ||||| |||| |||||||||||||||||||||| | | || | | ||| || ||||||||||| ||||||||||||||  |||||| |||| ||||||||    
T  14617195 aagggtaacccggtgcactaaagctcccgcatatgcagggtccgggaagggatcccaccatttggtgtattgtacgcaaccttaccttgttatttacaca 14617096  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||| || || ||||||| |||||||||||    
T  14617095 agaggctgtttccaggacttgaactcgtgacctttca 14617059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 27474437 - 27474302
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||| | |||||||||||||||||||||||| | || | | ||| ||||||||||||| ||||||||||||||||  || ||||| ||||||||||    
T  27474437 aagggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattcagtgtattgtacgcagctttgccctg-tttttacaca 27474339  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||| |||||| || || |||||| ||||||||||||    
T  27474338 agagactgtttccaagacttgaacctgtgacctttca 27474302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 109 - 240
Target Start/End: Complemental strand, 46991959 - 46991828
Alignment:
Q  109 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaag 208  Q
    |||||||| ||||||||||||||||| |||||| | || | | ||| |||||||||||||  ||||||||||| ||| ||||||||||||||||||||||    
T  46991959 gggcaacccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagccttaccctgttttttacacaag 46991860  T
Q  209 aggctgtttacacgatttgaacttgtgacctt 240  Q
    ||| ||||| || || ||||||  ||||||||    
T  46991859 aggttgtttccaggacttgaacccgtgacctt 46991828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 107 - 240
Target Start/End: Original strand, 20004091 - 20004226
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||| |||||||||||||||||||||| |   || ||| ||| |||||||||||||  | ||||||||||||||| |||||| |||||||||||    
T  20004091 aagggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttaca 20004190  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctt 240  Q
    | ||||||||||| || || ||||||  ||||||||    
T  20004191 cgagaggctgtttccaggacttgaacccgtgacctt 20004226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 107 - 240
Target Start/End: Original strand, 30395727 - 30395862
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||  |||||||||||||||||||||| |   || | | ||| |||||||||||||  | ||||||||||||||| ||||||||||||||||||    
T  30395727 aagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttaca 30395826  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctt 240  Q
    ||||||||||||| || || ||||||  ||||||||    
T  30395827 caagaggctgtttccaggacttgaacccgtgacctt 30395862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 27201806 - 27201668
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttaca 204  Q
    ||||||||||   |||||||||||||||||||||| |||| | | ||| ||||||||||||||   ||||||||||||||| |||||||||||| | |||    
T  27201806 aagggcaacccaatgcactaaagctcccgcatacgcaaggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttctgaca 27201707  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||||| || || ||||||   ||||||||||    
T  27201706 caagaggctgtttccaggacttgaacccatgacctttca 27201668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 118 - 240
Target Start/End: Complemental strand, 6925246 - 6925124
Alignment:
Q  118 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    |||||||||||||||||||||||| | || | | ||| |||||||||||||  ||||||||| ||||| |||||||| |||||||||||||||||| |||    
T  6925246 ggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattcggtgtattgtccgcagccttaccctattttttacacaagaggctattt 6925147  T
Q  218 acacgatttgaacttgtgacctt 240  Q
     || || ||||||  ||||||||    
T  6925146 ccaggacttgaacccgtgacctt 6925124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 243
Target Start/End: Original strand, 18724557 - 18724682
Alignment:
Q  117 tggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtt 216  Q
    |||||||| |||||||||||||| ||| || | | ||| ||||||||  |||| ||||||||||| ||| ||||||||||||||||||||||||||||||    
T  18724557 tggtgcac-aaagctcccgcatatgtagggtccgggaaggggtcccaagatttggtgtattgtacacagccttaccctgttttttacacaagaggctgtt 18724655  T
Q  217 tacacgatttgaacttgtgacctttca 243  Q
    | || || ||||||  |||||||||||    
T  18724656 tccaggacttgaacccgtgacctttca 18724682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 38478283 - 38478417
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||| ||||||||| ||||||||||||||| |||||||||  |||||||||    
T  38478283 aagggcaacccggtgcactagagctcccgcatatgcagggtccgagaaggggttccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 38478380  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||||||  | || ||||||  |||||||||||    
T  38478381 agaggctgtttctaggacttgaacccgtgacctttca 38478417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 41319807 - 41319943
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggct-gcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacac 205  Q
    ||||||||||  ||||||| || |||||||||| | ||||| | | ||| |||||||| ||||| ||||||||||||||| |||||||||||||||||||    
T  41319807 aagggcaacccagtgcactgaaactcccgcatatg-aagggttcgggaaggggtcccatcatttggtgtattgtacgcagccttaccctgttttttacac 41319905  T
Q  206 aagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||| |||||| || || || ||| ||||||||||||    
T  41319906 aagagactgtttccaggacttaaacctgtgacctttca 41319943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 45402251 - 45402128
Alignment:
Q  109 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcag-tctt--accctgttttttacac 205  Q
    |||||||| |||||||||||||||||||||||| | || ||| ||| |||||||||||||| |||||||||||||||  |||  |||||| |||||||||    
T  45402251 gggcaacccggtgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttggtgtattgtacgcagaacttgaaccctg-tttttacac 45402153  T
Q  206 aagaggctgtttacacgatttgaac 230  Q
    |||||||||||| || || ||||||    
T  45402152 aagaggctgtttccaggacttgaac 45402128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 107 - 217
Target Start/End: Original strand, 35253188 - 35253296
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||| | ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  35253188 aagggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 35253285  T
Q  207 agaggctgttt 217  Q
    |||||||||||    
T  35253286 agaggctgttt 35253296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 107 - 212
Target Start/End: Original strand, 1517312 - 1517418
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttttt-acac 205  Q
    |||||||||| |||||||||||||||| ||||||| | || ||| ||| ||||||||||| || ||||||||||||||| |||| | |||||||| ||||    
T  1517312 aagggcaacccggtgcactaaagctcctgcatacgcagggtctgagaaggggtcccaccaattggtgtattgtacgcagccttatcatgttttttaacac 1517411  T
Q  206 aagaggc 212  Q
    |||||||    
T  1517412 aagaggc 1517418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 118 - 243
Target Start/End: Original strand, 45264411 - 45264537
Alignment:
Q  118 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgtt 216  Q
    |||||||||||||||||||||| | | || ||| ||| |||||||||||||| | ||||||| || ||| ||||| ||||||||| ||||||||| ||||    
T  45264411 ggtgcactaaagctcccgcatatgcagggtctgagaaggggtcccaccattttggtgtattgcacacagccttactctgttttttgcacaagaggttgtt 45264510  T
Q  217 tacacgatttgaacttgtgacctttca 243  Q
    | || || |||||| ||||||||||||    
T  45264511 tccaggacttgaacatgtgacctttca 45264537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 243
Target Start/End: Original strand, 45812541 - 45812672
Alignment:
Q  110 ggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaaga 209  Q
    ||||||| ||||||||| |||||||||||| | | ||  || ||| |||||||||||||| |||||||||| |||| |||||||  | ||||||||||||    
T  45812541 ggcaacccggtgcactagagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtatgcagccttaccc--tcttttacacaaga 45812638  T
Q  210 ggctgtttacacgatttgaacttgtgacctttca 243  Q
    | |||||| || || |||||| ||||||||||||    
T  45812639 gactgttttcaggacttgaacctgtgacctttca 45812672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 47214666 - 47214532
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    ||||| || ||||||||||| |||||||||||| | | || ||| ||| |||||||||||||| ||||||||||||||  |||||||||  ||||| |||    
T  47214666 aagggtaatctggtgcactagagctcccgcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg--ttttaaaca 47214569  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||| |||||| || || ||||||  |||||||||||    
T  47214568 agagactgtttccaggacttgaacccgtgacctttca 47214532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 217
Target Start/End: Original strand, 31382206 - 31382324
Alignment:
Q  98 aaaaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtt 197  Q
    ||||| || |||||||||| ||| || ||||||||||||||| | | || |   ||| |||||||||||||| ||||||||||||||| |||| |||| |    
T  31382206 aaaaaaaaaaagggcaacccggtacagtaaagctcccgcatatgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttatcctg-t 31382304  T
Q  198 ttttacacaagaggctgttt 217  Q
    ||||||||||||||||||||    
T  31382305 ttttacacaagaggctgttt 31382324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 23796622 - 23796512
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    ||||||| || |||||||||||||||| ||||| | | || ||| ||| ||||| |||||||| ||||||||||||||  |||||  || ||||||||||    
T  23796622 aagggcagcccggtgcactaaagctccagcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgcaaccttacattgatttttacaca 23796523  T
Q  207 agaggctgttt 217  Q
    |||||||||||    
T  23796522 agaggctgttt 23796512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 4430080 - 4430129
Alignment:
Q  160 cccaccatttagtgtattgtacgcagtcttaccctgttttttacacaaga 209  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  4430080 cccaccatttggtgtattgtacgcagtcttaccctgttttttacacaaga 4430129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 6983812 - 6983946
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    ||||||| || ||||||| |||||||| || |||| | || | |  || |||||||||||||| ||||||||||||||  |||||||||||||||| ||     
T  6983812 aagggcagcccggtgcaccaaagctcctgcctacgcagggtccggaaaggggtcccaccatttggtgtattgtacgcatacttaccctgttttttatac- 6983910  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
     |||||||||| || || |||||| ||||||||||||    
T  6983911 -gaggctgtttccaggacttgaacctgtgacctttca 6983946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 18741958 - 18742054
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca--tttagtgtattgtacgcagtcttaccctgtttttt 201  Q
    ||||| |||| ||||||||||||||| |||||||| | || ||| ||| |||||||||||  ||| ||||||||||||||| |||||||||||||||    
T  18741958 aagggaaacccggtgcactaaagctctcgcatacgcagggtctgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttt 18742054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 115 - 217
Target Start/End: Complemental strand, 19701720 - 19701617
Alignment:
Q  115 cctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggct 213  Q
    ||||||||||||||||||||||||||| | || | | ||| ||| |||||||||| | |||||||||| ||  ||||||  |||||||||||||||||||    
T  19701720 cctggtgcactaaagctcccgcatacgcagggtccgggaaggggccccaccattttggtgtattgtacccatccttaccaagttttttacacaagaggct 19701621  T
Q  214 gttt 217  Q
    ||||    
T  19701620 gttt 19701617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 243
Target Start/End: Original strand, 25468285 - 25468400
Alignment:
Q  128 agctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttg 227  Q
    |||||||||||||| | || ||| |||  ||||| ||||||| ||||||||||||||  ||||||||| ||||||||||||||| ||||| || || |||    
T  25468285 agctcccgcatacgcagggtctgggaagaggtccaaccatttggtgtattgtacgcaaccttaccctgatttttacacaagaggttgtttccaggacttg 25468384  T
Q  228 aacttgtgacctttca 243  Q
    |||   ||||||||||    
T  25468385 aacccatgacctttca 25468400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 243
Target Start/End: Original strand, 2435798 - 2435924
Alignment:
Q  118 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgtt 216  Q
    ||||||||||||||||||||| || | ||   |  || |||||||||||||| | |||||||||||||| |||||||| ||||| ||||| |||||||||    
T  2435798 ggtgcactaaagctcccgcatgcggagggtacggaaaggggtcccaccattttggtgtattgtacgcaggcttaccctatttttcacacaggaggctgtt 2435897  T
Q  217 tacacgatttgaacttgtgacctttca 243  Q
    | || || ||||||  |||||||||||    
T  2435898 tccaggacttgaacccgtgacctttca 2435924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 199
Target Start/End: Original strand, 10378738 - 10378828
Alignment:
Q  109 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttt 199  Q
    ||||| || |||||||||||||||||||||| | | || |   ||| |||||||||||||| ||||||||||||||| |||||||||||||    
T  10378738 gggcagcccggtgcactaaagctcccgcatatgcagggtccaagaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 10378828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 17470411 - 17470457
Alignment:
Q  171 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  17470411 gtgtattgtacgcagccttaccctgttttttacacaagaggctgttt 17470457  T

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Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 19932755 - 19932856
Alignment:
Q  108 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttacac 205  Q
    |||||||||||||||||||| | ||  ||||||| | || | | ||| ||||||||||||||   ||||||||||||||| |||||||||||||||||||    
T  19932755 agggcaacctggtgcactaatgatcttgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacac 19932854  T
Q  206 aa 207  Q
    ||    
T  19932855 aa 19932856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 212
Target Start/End: Complemental strand, 8197200 - 8197095
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||| ||||||||||||  |||||| | || | | ||| |||||| ||||||| ||||| |||||| || |||||| |||||||||||||    
T  8197200 aagggcaacccggtacactaaagctccaacatacgcagggtccgagaaggggtcctaccatttggtgtactgtacgtagccttaccatgttttttacaca 8197101  T
Q  207 agaggc 212  Q
    ||||||    
T  8197100 agaggc 8197095  T

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Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 19414594 - 19414460
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||| |||||||||||| | | ||   | ||| |||||||||||||| ||||||||||||||| |||| ||||  ||||||| |    
T  19414594 aagggcaacccggtgcactagagctcccgcatatgcagggtacgggaaggggtcccaccatttggtgtattgtacgcagccttaacctg--ttttacata 19414497  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||| |||  | || ||||||  |||||||||||    
T  19414496 agaggctctttctaggacttgaacccgtgacctttca 19414460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 243
Target Start/End: Complemental strand, 35019375 - 35019251
Alignment:
Q  118 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    ||||||||||||||| |||||||| | || ||| ||  ||||||||||| || |||||||||| |||| ||||  ||| |||||| |||||||| |||||    
T  35019375 ggtgcactaaagctctcgcatacgcagggtctgggag-gggtcccaccaattggtgtattgtatgcagccttatactgatttttatacaagaggttgttt 35019277  T
Q  218 acacgatttgaacttgtgacctttca 243  Q
    ||| || |||||  ||||||||||||    
T  35019276 acaggacttgaatctgtgacctttca 35019251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 9939621 - 9939482
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaa-agggtcccacca--tttagtgtattgtacgcagtcttaccctgttttttac 203  Q
    ||||| |||| |||||||||||||||||||||||| | || | | |||  |||||||||||  ||| |||||||| |||||  |||||| ||||| |||     
T  9939621 aagggtaacccggtgcactaaagctcccgcatacgcagggtccgagaagggggtcccaccatttttggtgtattgcacgcaaccttaccatgtttcttaa 9939522  T
Q  204 acaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||| ||||| || || ||||||| |||||||||||    
T  9939521 acaagaggttgtttccaggacttgaactcgtgacctttca 9939482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 34679274 - 34679330
Alignment:
Q  161 ccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    |||||||||  ||||| |||||||||||||||||||||||||||||||||| |||||    
T  34679274 ccaccatttgatgtatagtacgcagtcttaccctgttttttacacaagaggttgttt 34679330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 201
Target Start/End: Complemental strand, 46859213 - 46859129
Alignment:
Q  118 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgtttttt 201  Q
    ||||||||||| ||||| |||||| |||| |||  || | |||||||||||| | ||||||||||||||||||||||||||||||    
T  46859213 ggtgcactaaaactcccacatacgcaaggcctgaaaatgagtcccaccattttggtgtattgtacgcagtcttaccctgtttttt 46859129  T

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Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 11596650 - 11596560
Alignment:
Q  126 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    |||||||||||||||| | || |   ||| |||||||||||||| ||||||| ||||||| |||||||||| |||||||||||||| |||||    
T  11596650 aaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattatacgcagccttaccctgt-ttttacacaagaggttgttt 11596560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 119 - 217
Target Start/End: Original strand, 12126850 - 12126946
Alignment:
Q  119 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    |||||||| |||||||||||| | | || | | ||| ||||||||| |||| ||||||||||||||| |||||||||  |||||||||||| |||||||    
T  12126850 gtgcactacagctcccgcatatgcagggtccgggaaggggtcccacaatttggtgtattgtacgcagccttaccctg--ttttacacaagaagctgttt 12126946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 43768296 - 43768205
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttt 198  Q
    ||||||| || |||||| ||||||||||| ||||| | || ||| ||| ||||||||||| || |||||||||| |||| ||||||||||||    
T  43768296 aagggcagcccggtgcattaaagctcccgtatacgcagggtctgggaaggggtcccaccaattggtgtattgtaggcagccttaccctgttt 43768205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 44485129 - 44485220
Alignment:
Q  126 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    |||||||||||||||||| |  | | ||| |||||| ||||||| ||||||||||||||| |||||| ||| ||||||||||| || |||||    
T  44485129 aaagctcccgcatacgtaggatccgggaaggggtccaaccatttggtgtattgtacgcagccttaccatgtcttttacacaagtggttgttt 44485220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 15505702 - 15505632
Alignment:
Q  126 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgt 196  Q
    |||||||||||||||| | ||   | ||| |||||||||||||| ||||||||||||||||||||||||||    
T  15505702 aaagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgt 15505632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 217
Target Start/End: Complemental strand, 43207640 - 43207542
Alignment:
Q  120 tgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca-tttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    ||||||||||||| ||||||| || || ||| |||  |||||||||| ||| |||||||||| || |||||||||||||||| ||| |||||| |||||    
T  43207640 tgcactaaagctctcgcatacatagggtctgggaagaggtcccaccaatttggtgtattgtatgccgtcttaccctgtttttcacataagaggttgttt 43207542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 230
Target Start/End: Complemental strand, 22325049 - 22324927
Alignment:
Q  108 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttacac 205  Q
    |||||| ||||||||||||||||||||||||||| | || | | ||  |||  |||||||||   |||||||||| |||| |||||||||||||| ||||    
T  22325049 agggcagcctggtgcactaaagctcccgcatacgcagggtcgg-gacggggctccaccatttttggtgtattgtatgcagccttaccctgttttt-acac 22324952  T
Q  206 aagaggctgtttacacgatttgaac 230  Q
    |||||||||||| || || ||||||    
T  22324951 aagaggctgtttccaagacttgaac 22324927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 243
Target Start/End: Original strand, 35117777 - 35117905
Alignment:
Q  118 ggtgcactaaagctcccgcat-acgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttacacaagaggctg 214  Q
    |||||||||||||||| |||| ||| | || | | ||| |||||||| |||||   ||||||||||| ||| |||||||||| ||||||||||||||||     
T  35117777 ggtgcactaaagctcctgcattacgcagggtccgggaaggggtcccatcatttttggtgtattgtacacagccttaccctgtattttacacaagaggcta 35117876  T
Q  215 tttacacgatttgaacttgtgacctttca 243  Q
    ||| || || ||||||  |||||||||||    
T  35117877 tttccaggacttgaacccgtgacctttca 35117905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 241
Target Start/End: Original strand, 39214961 - 39215094
Alignment:
Q  109 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtg-tattgtacgcagtcttaccctgttttttacacaa 207  Q
    ||||| || |||||||||||||| || |||||| | ||  || ||| ||| |||||||||| |   |||||||||||| ||||||| |||||||||||||    
T  39214961 gggcagcccggtgcactaaagcttccacatacgcagggtttgggaaggggacccaccattttggaatattgtacgcagccttacccagttttttacacaa 39215060  T
Q  208 gaggctgtttacacgatttgaacttgtgaccttt 241  Q
    |||| ||||| ||  | ||||||||| |||||||    
T  39215061 gaggttgtttccagtacttgaacttgggaccttt 39215094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 243
Target Start/End: Original strand, 18335305 - 18335425
Alignment:
Q  123 actaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacg 222  Q
    ||||||||||||| ||||  | || ||  |||||||||||| |||||  |||||||||||||   |||||||  |||||| ||||||| |||||| || |    
T  18335305 actaaagctcccgtatacacatggtctaggaaagggtcccatcatttgatgtattgtacgcaactttaccctaatttttaaacaagagactgtttccagg 18335404  T
Q  223 atttgaacttgtgacctttca 243  Q
    | || ||||||||||||||||    
T  18335405 actttaacttgtgacctttca 18335425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 243
Target Start/End: Complemental strand, 24564445 - 24564365
Alignment:
Q  163 accatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||| ||| ||||||||||  ||||||||||||||||||||||||| ||||| || || |||||  || |||||||||    
T  24564445 accatttggtgaattgtacgcacccttaccctgttttttacacaagaggttgtttccaagacttgaatctgcgacctttca 24564365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 107 - 200
Target Start/End: Original strand, 42304208 - 42304303
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca--tttagtgtattgtacgcagtcttaccctgttttt 200  Q
    |||||||| | ||||||||||||||||| |||||| | || | | ||| |||||||||||  ||| ||||||||||||||  ||||||||||||||    
T  42304208 aagggcaatccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattttttgtgtattgtacgcaaccttaccctgttttt 42304303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 243
Target Start/End: Original strand, 15511150 - 15511288
Alignment:
Q  108 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgta--cgcagtcttaccctgttttttaca 204  Q
    |||||| || ||||||||||||||| | |||||| | || |   ||| |||| ||||||||| | |||||||||  ||||| ||||||||||||||||||    
T  15511150 agggcagcccggtgcactaaagctcacacatacgcagggtccaggaaggggtaccaccattttggtgtattgtatccgcagccttaccctgttttttaca 15511249  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||| |||| || || || ||  ||||||||||||    
T  15511250 caagaggcggtttccaggacttcaatatgtgacctttca 15511288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 213
Target Start/End: Original strand, 20999851 - 20999957
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagg-gctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacac 205  Q
    ||||||| || ||||||||||||||||||| |||| | || || | ||| ||| |||| ||||| ||||||||||||||| ||| || ||||||||||||    
T  20999851 aagggcagcccggtgcactaaagctcccgcgtacgcagggtgccg-gaaggggccccatcatttggtgtattgtacgcagccttgccttgttttttacac 20999949  T
Q  206 aagaggct 213  Q
    ||| ||||    
T  20999950 aagtggct 20999957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 230
Target Start/End: Complemental strand, 30682963 - 30682848
Alignment:
Q  112 caacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagagg 211  Q
    |||| |||||||| |||||||||||||||| | || | | ||| ||||||||||||||  ||||| |||| || ||||||| ||||||| ||||||||||    
T  30682963 caacttggtgcac-aaagctcccgcatacgcacggtccgggaaggggtcccaccatttgttgtat-gtacacaatcttaccttgttttt-acacaagagg 30682867  T
Q  212 ctgtttacacgatttgaac 230  Q
    || ||| || |||||||||    
T  30682866 ctattttcaggatttgaac 30682848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 27136701 - 27136762
Alignment:
Q  156 gggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgtt 216  Q
    |||||||||||||| | |||||||||||||  |||||| |||||||||||||||||| ||||    
T  27136701 gggtcccaccattttggtgtattgtacgcaaccttaccatgttttttacacaagaggttgtt 27136762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 52910311 - 52910238
Alignment:
Q  171 gtgtattgtacgcagtcttaccctgtttttt-acacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||| ||||| ||||||||||||| ||  |||||||||||| || || |||||| ||||||||||||    
T  52910311 gtgtattgtacacagtcctaccctgtttttttacctaagaggctgtttccaagagttgaacctgtgacctttca 52910238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 50760291 - 50760359
Alignment:
Q  171 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacct 239  Q
    ||||||| ||||||| ||||||| ||||| ||||||||||||||||| || || ||||||  |||||||    
T  50760291 gtgtattatacgcagccttacccagttttatacacaagaggctgttttcaggacttgaacccgtgacct 50760359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 31272429 - 31272511
Alignment:
Q  160 cccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||  |||  ||||||||| |||||| |||||| ||||||||||| ||||| || || |||||| ||||||||||||    
T  31272429 cccaccatttgatgtgctgtacgcagccttaccatgtttt-tacacaagaggttgtttccaggacttgaacctgtgacctttca 31272511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 19656151 - 19656217
Alignment:
Q  152 gaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    |||||||||| ||||||| | ||||||||||  ||  ||||| ||||||||||||||||||||||||    
T  19656151 gaaagggtcctaccattttggtgtattgtacatagcgttaccatgttttttacacaagaggctgttt 19656217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 33223092 - 33223031
Alignment:
Q  156 gggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    |||||||||||||| | |||||||||||||  ||| |||||||||| ||||||||||||||||    
T  33223092 gggtcccaccattttggtgtattgtacgcaacctttccctgttttt-acacaagaggctgttt 33223031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 50606560 - 50606498
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattt 169  Q
    |||||||||| |||||||||||||||||||||| | | || | | ||| ||||||||||||||    
T  50606560 aagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattt 50606498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 22327185 - 22327120
Alignment:
Q  178 gtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||| ||| ||||||||||||||||||||||||| ||||| || || ||||||  | |||||||||    
T  22327185 gtacacagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgcgacctttca 22327120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 243
Target Start/End: Complemental strand, 23371268 - 23371145
Alignment:
Q  118 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    |||||||||||||| || |||||| | || ||| ||| |||||||| ||||| ||||||||||| ||  ||| ||| ||||||||| |||| ||||||||    
T  23371268 ggtgcactaaagctaccacatacgcagggtctg-gaaggggtcccagcatttggtgtattgtacacaaccttgccc-gttttttacccaagtggctgttt 23371171  T
Q  218 acacgatttgaacttgtgacctttca 243  Q
      | || ||||||  |||||||||||    
T  23371170 ctaggacttgaacccgtgacctttca 23371145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 34149010 - 34149071
Alignment:
Q  156 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    ||||| |||||||| || | |||||||||  |||||||| |||| |||||||||||||||||    
T  34149010 gggtctcaccatttggtcttttgtacgcaaccttaccctattttctacacaagaggctgttt 34149071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 20036329 - 20036241
Alignment:
Q  156 gggtcccaccatttagtgtattgtacgcagtcttaccctgttt-tttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||| ||||||||| |||||||| ||||| ||||||||| | | ||||||||||||  ||||| || || ||||||  |||||||||||    
T  20036329 gggttccaccatttggtgtattgaacgcaatcttaccctttctctttacacaagagtttgtttccaggacttgaacccgtgacctttca 20036241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 20169156 - 20169200
Alignment:
Q  173 gtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    ||||||||| |||||||||| | |||||||||||||||| |||||    
T  20169156 gtattgtacacagtcttacctttttttttacacaagagggtgttt 20169200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 21910699 - 21910743
Alignment:
Q  156 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttt 200  Q
    |||||||||||||| ||||||||||||||  |||||||| |||||    
T  21910699 gggtcccaccatttggtgtattgtacgcaaccttaccctattttt 21910743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 215
Target Start/End: Complemental strand, 25290242 - 25290214
Alignment:
Q  187 cttaccctgttttttacacaagaggctgt 215  Q
    |||||||||||||||||||||||||||||    
T  25290242 cttaccctgttttttacacaagaggctgt 25290214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 104 - 243
Target Start/End: Original strand, 11617586 - 11617725
Alignment:
Q  104 aataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttac 203  Q
    ||||||||||||| |||||||||||| ||| ||||||| | || |   ||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  11617586 aataagggcaacccggtgcactaaaggtcctgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttac 11617685  T
Q  204 acaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||| ||||| || || |||||| ||||||||||||    
T  11617686 acaagaggttgtttccaggacttgaacctgtgacctttca 11617725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 107 - 242
Target Start/End: Original strand, 2541020 - 2541155
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    ||||| |||| |||||||||||||||||||||||| | || | | ||| |||||||||||||| |||||| |||||||| ||||||||||||||||||||    
T  2541020 aagggaaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccatttggtgtatagtacgcagccttaccctgttttttacaca 2541119  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttc 242  Q
    ||||||||||| || || ||||||  ||||||||||    
T  2541120 agaggctgtttccaggacttgaacccgtgacctttc 2541155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 107 - 241
Target Start/End: Original strand, 23419675 - 23419809
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    ||||||| || | ||||||||||| |||||| ||| |||| ||  ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23419675 aagggcagcccgatgcactaaagcccccgcacacgcaaggtctaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacaca 23419774  T
Q  207 agaggctgtttacacgatttgaacttgtgaccttt 241  Q
    ||||||||||| ||  | |||||| ||||||||||    
T  23419775 agaggctgtttccagaacttgaacctgtgaccttt 23419809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 98 - 242
Target Start/End: Original strand, 19426882 - 19427025
Alignment:
Q  98 aaaaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtt 197  Q
    ||||| || |||||||||| |||||||| |||||| |||||| | | || | | ||| |||||||||||||| |||||||||||||||||||||||| ||    
T  19426882 aaaaaaaaaaagggcaacccggtgcactgaagctctcgcatatgcagggtccgagaa-gggtcccaccatttggtgtattgtacgcagtcttaccctatt 19426980  T
Q  198 ttttacacaagaggctgtttacacgatttgaacttgtgacctttc 242  Q
    |||||||||||||||||||| || || ||||||  ||||||||||    
T  19426981 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 19427025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 98 - 240
Target Start/End: Complemental strand, 7879781 - 7879639
Alignment:
Q  98 aaaaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtt 197  Q
    ||||| || |||||||||| |||||||| ||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||| |||||| ||||    
T  7879781 aaaaaaaaaaagggcaacccggtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgtt 7879682  T
Q  198 ttttacacaagaggctgtttacacgatttgaacttgtgacctt 240  Q
    |||||||||||||  ||||| || || ||||||  ||||||||    
T  7879681 ttttacacaagagattgtttccaggacttgaacccgtgacctt 7879639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 21172010 - 21172144
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  21172010 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 21172107  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||| || || ||||||  |||||||||||    
T  21172108 agaggctgtttccaggacttgaacccgtgacctttca 21172144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 31591110 - 31591244
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||| |||||||||||| | |||| | | ||| ||||||||||||||| |||||||||||||| ||||| |||  |||||||||    
T  31591110 aagggcaacccggtgcactagagctcccgcatatgcaaggtccgggaaggggtcccaccatttattgtattgtacgcagccttactctg--ttttacaca 31591207  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||| ||||| || || ||||||| |||||||||||    
T  31591208 agaggttgtttccaggacttgaactcgtgacctttca 31591244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 32758393 - 32758259
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||| ||| |||||||||  |||||||||    
T  32758393 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctg--ttttacaca 32758296  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||| || || |||||| ||||||||||||    
T  32758295 agaggctgtttccaggacttgaacctgtgacctttca 32758259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 107 - 240
Target Start/End: Complemental strand, 42798803 - 42798670
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| | ||||||| |||||||||||| | | || | | |||||||||||||||||| ||||||||||||||| |||||| |||||||||||||    
T  42798803 aagggcaacccgatgcactatagctcccgcatatgcagggtccgggaaagggtcccaccatttggtgtattgtacgcagccttaccttgttttttacaca 42798704  T
Q  207 agaggctgtttacacgatttgaacttgtgacctt 240  Q
    |||| |||||| || || ||||||  ||||||||    
T  42798703 agagactgtttccaagacttgaacccgtgacctt 42798670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 107 - 242
Target Start/End: Complemental strand, 27629768 - 27629633
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| |||||||| ||||| ||||||| | | || | | ||| |||||||||||||| ||||||| ||||||  ||||||||||||||||||||    
T  27629768 aagggcaacccggtgcactgaagctaccgcatatgcagggcccgggaaggggtcccaccatttggtgtattttacgcaaccttaccctgttttttacaca 27629669  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttc 242  Q
    ||||||||||| || || ||||||  ||||||||||    
T  27629668 agaggctgtttccaggacttgaacccgtgacctttc 27629633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 243
Target Start/End: Original strand, 33871914 - 33872046
Alignment:
Q  110 ggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaaga 209  Q
    ||||||||||||||||||||||| |||||||  | || ||| ||| |||||||||||||| ||||||||||||||| |||| |||| |||||||||||||    
T  33871914 ggcaacctggtgcactaaagctctcgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttatcctg-tttttacacaaga 33872012  T
Q  210 ggctgtttacacgatttgaacttgtgacctttca 243  Q
    || ||||| || || ||||||  | |||||||||    
T  33872013 ggttgtttccaggacttgaacccgcgacctttca 33872046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 42391101 - 42391235
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  42391101 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 42391198  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||| ||||||| || || ||||||  |||||||||||    
T  42391199 agaagctgtttccaggacttgaacccgtgacctttca 42391235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 107 - 240
Target Start/End: Complemental strand, 42805660 - 42805525
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||| |||||||||||||||||||||| |   || | | ||| |||||||||||||  | ||||||||||| ||| ||||||||||||||||||    
T  42805660 aagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttaca 42805561  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctt 240  Q
    ||||||||||||| || || ||||||  ||||||||    
T  42805560 caagaggctgtttccaggacttgaacccgtgacctt 42805525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 107 - 240
Target Start/End: Complemental strand, 47716595 - 47716460
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||| ||||||| |||||||||||||| |   || | | ||| |||||||||||||  | ||||||||||||||| ||||||||||||||||||    
T  47716595 aagggcaacccggtgcaccaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttaca 47716496  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctt 240  Q
    ||||||||||||| || || ||||||  ||||||||    
T  47716495 caagaggctgtttccaggacttgaacccgtgacctt 47716460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 10693074 - 10693208
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    ||||||||||  |||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||  | |||||||||    
T  10693074 aagggcaacccagtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccc--tcttttacaca 10693171  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||| || || ||||||  |||||||||||    
T  10693172 agaggctgtttccaggacttgaacccgtgacctttca 10693208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 126 - 243
Target Start/End: Original strand, 28362165 - 28362282
Alignment:
Q  126 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatt 225  Q
    ||||||||| |||| | |||| ||| ||| |||||||||||||| ||||||||||||||| ||||||  |||||||||||||||||| ||||  | || |    
T  28362165 aaagctcccacatatgcaaggtctgggaaggggtcccaccatttggtgtattgtacgcagccttaccaagttttttacacaagaggcagtttctaggact 28362264  T
Q  226 tgaacttgtgacctttca 243  Q
    ||||| ||||||||||||    
T  28362265 tgaacctgtgacctttca 28362282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 240
Target Start/End: Original strand, 35334818 - 35334948
Alignment:
Q  108 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaa 207  Q
    |||| |||| |||||||||||||||| ||||||| | || | | ||| |||||||||||||  ||||||||||| |||||||||||||||||||||||      
T  35334818 agggaaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagtcttaccctgttttttacac-- 35334915  T
Q  208 gaggctgtttacacgatttgaacttgtgacctt 240  Q
    ||| |||||| || || ||||||| ||||||||    
T  35334916 gagactgtttccaggacttgaactcgtgacctt 35334948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 216
Target Start/End: Original strand, 35787270 - 35787378
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| |||||| | ||||||||||||||| |||| | | ||| ||||||| |||||| ||||||||||||||  |||||| || ||||||||||    
T  35787270 aagggcaacccggtgcattgaagctcccgcatacgcaaggtccgggaaggggtcccgccatttggtgtattgtacgcaaccttaccatg-tttttacaca 35787368  T
Q  207 agaggctgtt 216  Q
    ||||||||||    
T  35787369 agaggctgtt 35787378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 98 - 243
Target Start/End: Complemental strand, 43557618 - 43557470
Alignment:
Q  98 aaaaacaataagggcaacctggtgcactaaa-gctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccct 194  Q
    ||||| || |||||||||| ||||||||||| ||||||||||||| |  | | | ||  |||||||||||||  | ||||||||||||||| ||||| ||    
T  43557618 aaaaaaaaaaagggcaacccggtgcactaaaagctcccgcatacgcagagtccgggagggggtcccaccattattggtgtattgtacgcagccttactct 43557519  T
Q  195 gttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||||||||||||||| || || ||||||   ||||||||||    
T  43557518 gttttttacacaagaggctgtttccaggacttgaacccatgacctttca 43557470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 19265947 - 19265813
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    ||||||| || ||||||||||||||||| |||| ||| || | | ||| |||||||||||||| ||||||||||||||| ||||||||  ||||||||||    
T  19265947 aagggcagcccggtgcactaaagctcccacatatgta-ggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-ctttttacaca 19265850  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    || |||||| | || || ||||||  |||||||||||    
T  19265849 agcggctgtatccaagacttgaacccgtgacctttca 19265813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 34626209 - 34626344
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| | || ||||||||||||||||||| | || | | ||| || ||||||||||| |||||||| |||||| ||||||||| ||||||||||    
T  34626209 aagggcaacccgatgaactaaagctcccgcatacgcagggtccgggaagggatcccaccatttggtgtattgaacgcagccttaccctg-tttttacaca 34626307  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
     |||||||||| || || |||||  |||| |||||||    
T  34626308 ggaggctgtttccaggacttgaatctgtggcctttca 34626344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 240
Target Start/End: Original strand, 42101899 - 42102019
Alignment:
Q  121 gcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca-tttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttac 219  Q
    ||||||||||| ||| ||||| | || | | ||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||  |||||||||||| |    
T  42101899 gcactaaagctgccggatacgcagggtccgggaaagggtcccaccactttagagtactgtacgcagtgttaccctgttttttacggaagaggctgtttcc 42101998  T
Q  220 acgatttgaacttgtgacctt 240  Q
    | || |||||||| |||||||    
T  42101999 aggacttgaacttttgacctt 42102019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 210
Target Start/End: Original strand, 22698968 - 22699074
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaa-gggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttac 203  Q
    ||||| |||| ||||||||| |||||||||||||  | || | | |||| ||||||||||||||   |||||||||||||||||||||||||||||||||    
T  22698968 aagggtaacccggtgcactatagctcccgcatacacagggtccgggaaaagggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttac 22699067  T
Q  204 acaagag 210  Q
    |||||||    
T  22699068 acaagag 22699074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 42477005 - 42476897
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||||||||||||| |||||||||||| | |  | ||  ||| |||||||||||||| ||||||||||||||| |||||| ||  |||||||||    
T  42477005 aagggcaacctggtgcactagagctcccgcatatgcagagcctaggaaggggtcccaccatttggtgtattgtacgcagccttaccttg--ttttacaca 42476908  T
Q  207 agaggctgttt 217  Q
    |||| ||||||    
T  42476907 agagactgttt 42476897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 48123534 - 48123621
Alignment:
Q  156 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||||||||| |||||||||| ||||| |||||||||| ||||||||||||||||||| || || ||||||   ||||||||||    
T  48123534 gggtcccaccatttggtgtattgtatgcagttttaccctgttatttacacaagaggctgtttccaggacttgaacccatgacctttca 48123621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 217
Target Start/End: Original strand, 48735123 - 48735231
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| ||||||  || |||||||||    
T  48735123 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttacc--gtgttttacaca 48735220  T
Q  207 agaggctgttt 217  Q
    ||||| |||||    
T  48735221 agaggttgttt 48735231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 213
Target Start/End: Original strand, 14099008 - 14099113
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    ||||||| |||||||||  ||| |||| ||||||||| ||   | ||| |||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  14099008 aagggcagcctggtgcaa-aaatctcctgcatacgtagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacaca 14099106  T
Q  207 agaggct 213  Q
    | |||||    
T  14099107 aaaggct 14099113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 213
Target Start/End: Original strand, 14409025 - 14409130
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    ||||||| |||||||||  ||| |||| ||||||||| ||   | ||| |||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  14409025 aagggcagcctggtgcaa-aaatctcctgcatacgtagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacaca 14409123  T
Q  207 agaggct 213  Q
    | |||||    
T  14409124 aaaggct 14409130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 242
Target Start/End: Original strand, 18512455 - 18512588
Alignment:
Q  108 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaa 207  Q
    |||||||||  |||||| |||||||||||||||| | || | | ||| |||||||||||||  ||||||||||||||| ||||||||  |||||||||||    
T  18512455 agggcaacccagtgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaa 18512553  T
Q  208 gaggctgtttacacgatttgaacttgtgacctttc 242  Q
    || | ||||| || || ||||||  ||||||||||    
T  18512554 gatgttgtttccaggacttgaacccgtgacctttc 18512588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 29907552 - 29907417
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacac 205  Q
    |||||||||| |||||||||||||||||||||||  | || | | ||  |||||||||||||| | ||||||| |||||| ||||| || ||||||||||    
T  29907552 aagggcaacccggtgcactaaagctcccgcatac--agggtccgggatggggtcccaccattttggtgtattgaacgcagccttacactattttttacac 29907455  T
Q  206 aagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||||  | || ||||||  |||||||||||    
T  29907454 aagaggctgtttctaggacttgaacccgtgacctttca 29907417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 40464010 - 40463901
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||  |||||||| ||||||||||||||| | || | | ||| |||||||||||||| ||||||| ||||||| ||||||| | ||||||||||    
T  40464010 aagggcaactcggtgcactgaagctcccgcatacgcagggtccgagaaggggtcccaccatttggtgtattatacgcagccttacccag-tttttacaca 40463912  T
Q  207 agaggctgttt 217  Q
    |||| ||||||    
T  40463911 agagactgttt 40463901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 217
Target Start/End: Complemental strand, 16341419 - 16341302
Alignment:
Q  101 aacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgtttt 199  Q
    |||| |||||||| || ||||||| |||||||||||||| |  ||| | | |||  || |||||||||| | ||||||||||| || |||||||||||||    
T  16341419 aacattaagggcagcccggtgcaccaaagctcccgcatatgataggtccgggaagagggcccaccattttggtgtattgtacgtagccttaccctgtttt 16341320  T
Q  200 ttacacaagaggctgttt 217  Q
    ||||||||||||||||||    
T  16341319 ttacacaagaggctgttt 16341302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 18747621 - 18747484
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacac 205  Q
    ||||||| || |||||||||||||||||||||||| | ||     ||| ||||||||||| || ||||||| ||||||| ||||||||| ||||||||||    
T  18747621 aagggcagcccggtgcactaaagctcccgcatacgcagggttcaggaaggggtcccaccaattggtgtattatacgcagccttaccctgcttttttacac 18747522  T
Q  206 aagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    || ||||||||| || || |||| |  |||||||||||    
T  18747521 aaaaggctgtttccaagacttgatcccgtgacctttca 18747484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 7645026 - 7644954
Alignment:
Q  171 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| || || ||||||  |||||||||||    
T  7645026 gtgtattgtacgctatcttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttca 7644954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 237
Target Start/End: Complemental strand, 21566559 - 21566439
Alignment:
Q  118 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgtt 216  Q
    |||||||||||||||||||||| | | ||   | ||| |||||| ||||||| | |||||||||||||||||| | |||||||||||||||||||| |||    
T  21566559 ggtgcactaaagctcccgcatatgcagggttcgggaaggggtcctaccattttggtgtattgtacgcagtcttcctctgttttttacacaagaggcggtt 21566460  T
Q  217 tacacgatttgaacttgtgac 237  Q
    | || || |||||| ||||||    
T  21566459 tccaagacttgaacctgtgac 21566439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 38604642 - 38604551
Alignment:
Q  125 taaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    ||||||||||||||||| | || | |  || ||||| |||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  38604642 taaagctcccgcatacgcagggtccggaaaggggtctcaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgttt 38604551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 240
Target Start/End: Complemental strand, 46354281 - 46354195
Alignment:
Q  156 gggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctt 240  Q
    |||||||||||||  | ||||||||||||||| ||||||||||||||||||||||||| ||||| || || ||||||  ||||||||    
T  46354281 gggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgacctt 46354195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 2662982 - 2663057
Alignment:
Q  153 aaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaac 230  Q
    ||||||||||||||||| ||||||||||||||| |||||||  | |||||||||||||||||||| || || ||||||    
T  2662982 aaagggtcccaccatttggtgtattgtacgcagccttaccc--tattttacacaagaggctgtttccaggacttgaac 2663057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 204
Target Start/End: Original strand, 23618978 - 23619075
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||| | |||||||||||||| ||| ||| |||| ||||||| ||||||||||||||  |||||||||| ||  ||||| ||||||| ||||    
T  23618978 aagggcaacccgctgcactaaagctcctgcaaacgcaaggtctgcgaaggggtcccaccatttgatgtattgtacacaagcttactctgttttataca 23619075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 237
Target Start/End: Original strand, 8148947 - 8149077
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttttt-acac 205  Q
    ||||| || ||| ||||||||| ||| |||||||| |||  ||| ||| |||||||||||||| ||||||||||||||  |||||||| |||||| ||||    
T  8148947 aagggtaatctgatgcactaaaactctcgcatacgcaagt-ctgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttaacac 8149045  T
Q  206 aagaggctgtttacacgatttgaacttgtgac 237  Q
    ||||||  |||| || || ||||||| |||||    
T  8149046 aagaggtagttttcaggacttgaactcgtgac 8149077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 230
Target Start/End: Complemental strand, 19266564 - 19266461
Alignment:
Q  127 aagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgattt 226  Q
    ||||||||||||||| | || | | ||| || |||||| |||| ||||||||||||||| ||||||||||||||||| |||| |||| ||| || || ||    
T  19266564 aagctcccgcatacgcagggtccgggaagggatcccacaatttggtgtattgtacgcagccttaccctgttttttacgcaagtggctattttcaggactt 19266465  T
Q  227 gaac 230  Q
    ||||    
T  19266464 gaac 19266461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 185
Target Start/End: Original strand, 27889317 - 27889395
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcag 185  Q
    |||||||||| |||| || |||||||||||||||| | || | | ||| |||||||||||||| |||||||||||||||    
T  27889317 aagggcaacccggtgtaccaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcag 27889395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 243
Target Start/End: Original strand, 47077867 - 47077990
Alignment:
Q  118 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    ||||||||| |||||||||||| ||| ||  || ||| |||||||||||||| ||||||||||||||   |||  || | ||||||||||||| ||||||    
T  47077867 ggtgcactagagctcccgcatatgtagggtttgggaaggggtcccaccattttgtgtattgtacgcaacttta--ctctattttacacaagagactgttt 47077964  T
Q  218 acacgatttgaacttgtgacctttca 243  Q
     || || ||||||  |||||||||||    
T  47077965 ccaggacttgaacccgtgacctttca 47077990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 1408542 - 1408485
Alignment:
Q  156 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggct 213  Q
    ||||||||||||||  |||||||||| ||| |||||| ||||||||||||||||||||    
T  1408542 gggtcccaccatttgctgtattgtacacagccttaccttgttttttacacaagaggct 1408485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 35203506 - 35203437
Alignment:
Q  174 tattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||||||||| |||||||||||||||||||  ||||| || || ||||||  |||||||||||    
T  35203506 tattgtacgcagtcttatcctgttttttacacaagagaatgtttccaggacttgaacccgtgacctttca 35203437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 240
Target Start/End: Original strand, 38262197 - 38262330
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||| | |||||||||||||||||||||||| |  |   | ||| |||||||| ||||| |||||||||| |||   ||||| | |||||||||||    
T  38262197 aagggcaatccggtgcactaaagctcccgcatacgcagtgttcgggaaggggtcccatcatttggtgtattgtatgcaacattaccatattttttacaca 38262296  T
Q  207 agaggctgtttacacgatttgaacttgtgacctt 240  Q
    |||| |||||| || || ||||||  ||||||||    
T  38262297 agagactgtttccaggacttgaacccgtgacctt 38262330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 217
Target Start/End: Complemental strand, 25198856 - 25198749
Alignment:
Q  111 gcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacacaaga 209  Q
    |||||| ||||||||||||||| | |||||| | || ||| ||| || ||| ||||||||||| ||| ||||| |||||||| || |||||||||||| |    
T  25198856 gcaacccggtgcactaaagctctcacatacgaagggtctgggaagggatcctaccatttagtgcattatacgcggtcttaccttgtttttttacacaaaa 25198757  T
Q  210 ggctgttt 217  Q
    | ||||||    
T  25198756 gactgttt 25198749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 5180222 - 5180268
Alignment:
Q  171 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    |||| |||||| |||||||||||||||||| ||||||||||||||||    
T  5180222 gtgtgttgtacacagtcttaccctgtttttgacacaagaggctgttt 5180268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 243
Target Start/End: Complemental strand, 11741936 - 11741793
Alignment:
Q  98 aaaaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtt 197  Q
    |||||| |||||||||||| ||||||||| |||||||||||  | |    | | ||| || ||||||||||| ||||||||||||||| |||||||  |     
T  11741936 aaaaactataagggcaacccggtgcactagagctcccgcatgtgcagaatccgggaagggatcccaccatttggtgtattgtacgcagccttaccc--ta 11741839  T
Q  198 ttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||| ||| ||||||| || || ||||||   ||||||||||    
T  11741838 ttttacactagaagctgttttcaggacttgaacccatgacctttca 11741793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 107 - 141
Target Start/End: Original strand, 45018924 - 45018958
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacg 141  Q
    |||||||||||||||||||||||||||||||||||    
T  45018924 aagggcaacctggtgcactaaagctcccgcatacg 45018958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 12473374 - 12473302
Alignment:
Q  171 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||||||  |||||||||||||| |||||||||| ||||| || || ||||||   ||||||||||    
T  12473374 gtgtattgtacgcatccttaccctgtttttgacacaagaggttgtttgcaggacttgaacccatgacctttca 12473302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 243
Target Start/End: Original strand, 1524276 - 1524323
Alignment:
Q  196 ttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||| |||||||||||||||||| | || |||||||||||||||||||    
T  1524276 ttttatacacaagaggctgtttataagacttgaacttgtgacctttca 1524323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 23231680 - 23231585
Alignment:
Q  118 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggct 213  Q
    |||||||||||||| ||||||||| | ||   | ||| |||||||| ||||  ||||||| ||||||| |||||| | | ||||||||||||||||    
T  23231680 ggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcattcggtgtattatacgcagccttaccttatattttacacaagaggct 23231585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 6736969 - 6736888
Alignment:
Q  161 ccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||| |||||||||| ||||||||||| || |||||| |||||||| |||||  | || ||||||  |||||||||||    
T  6736969 ccaccatttggtgtattgtatgcagtcttaccttg-tttttatacaagaggttgttttgaggacttgaacccgtgacctttca 6736888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 141
Target Start/End: Complemental strand, 36602581 - 36602547
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacg 141  Q
    |||||||||| ||||||||||||||||||||||||    
T  36602581 aagggcaacccggtgcactaaagctcccgcatacg 36602547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 32233188 - 32233271
Alignment:
Q  159 tcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||| ||||| | ||||| | ||||||||| ||||||||||||||| ||||| || || ||||||   ||||||||||    
T  32233188 tcccaccatttggtgtaatatacgctgccttaccctg-tttttacacaagaggttgtttccaggacttgaacccatgacctttca 32233271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 33500635 - 33500556
Alignment:
Q  121 gcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttt 198  Q
    ||||| ||| ||||||||||| | || | | ||| ||||||||||||||   |||||| |||||||||||||||||||||    
T  33500635 gcactgaagatcccgcatacgcagggtccgggaaggggtcccaccattttttgtgtatagtacgcagtcttaccctgttt 33500556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 5e-34; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 107 - 240
Target Start/End: Complemental strand, 36720930 - 36720797
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| |||||||||||||| ||||||||| | || | | ||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  36720930 aagggcaaccgggtgcactaaagcttccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacaca 36720831  T
Q  207 agaggctgtttacacgatttgaacttgtgacctt 240  Q
    ||||||||||| || || ||||||  ||||||||    
T  36720830 agaggctgtttccaggacttgaacccgtgacctt 36720797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 107 - 240
Target Start/End: Original strand, 28817627 - 28817760
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| | |||||||||||||||||||||| | || | | ||| |||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  28817627 aagggcaacccgatgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattgggtgtattgtacgcagccttaccctgttttttacaca 28817726  T
Q  207 agaggctgtttacacgatttgaacttgtgacctt 240  Q
    ||||||||||| || || ||||||  ||||||||    
T  28817727 agaggctgtttccaggacttgaacccgtgacctt 28817760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 45071400 - 45071289
Alignment:
Q  105 ataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||||| |||||||| ||||||||||||||| |||| | | ||| |||||||||||||| ||||||||||||||| |||||||||| |||||||    
T  45071400 ataagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttaca 45071302  T
Q  205 caagaggctgttt 217  Q
    |||||||||||||    
T  45071301 caagaggctgttt 45071289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 111 - 240
Target Start/End: Original strand, 29521690 - 29521819
Alignment:
Q  111 gcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagag 210  Q
    |||||| |||||||||||||||||||||||| | || ||| ||  || ||||||||||| ||||||||||||||| |||||||||||||||| |||||||    
T  29521690 gcaacccggtgcactaaagctcccgcatacgcagggtctgggatgggttcccaccatttggtgtattgtacgcagccttaccctgttttttaaacaagag 29521789  T
Q  211 gctgtttacacgatttgaacttgtgacctt 240  Q
    ||||||| || || ||||||  ||||||||    
T  29521790 gctgtttccaggacttgaacccgtgacctt 29521819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 108 - 217
Target Start/End: Complemental strand, 29877227 - 29877118
Alignment:
Q  108 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaa 207  Q
    |||||| ||||||||||||| ||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  29877227 agggcagcctggtgcactaacgctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaa 29877128  T
Q  208 gaggctgttt 217  Q
     |||||||||    
T  29877127 aaggctgttt 29877118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 107 - 240
Target Start/End: Complemental strand, 44530283 - 44530150
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||| ||||| |||||||||||||||||||||||| | || |   ||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  44530283 aaggtcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacaca 44530184  T
Q  207 agaggctgtttacacgatttgaacttgtgacctt 240  Q
    ||||| ||||| || || ||||||  ||||||||    
T  44530183 agaggttgtttccaagacttgaacccgtgacctt 44530150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 242
Target Start/End: Complemental strand, 2626656 - 2626518
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtt---ttttac 203  Q
    |||||||| |||||||||| ||||||||||||| | | || ||| ||| |||||||| ||||| |||||||||||||||||||||||||||   ||||||    
T  2626656 aagggcaatctggtgcactgaagctcccgcatatgcagggtctgggaaggggtcccatcatttggtgtattgtacgcagtcttaccctgtttttttttac 2626557  T
Q  204 acaagaggctgtttacacgatttgaacttgtgacctttc 242  Q
    |||||||||||||| || || ||||||  ||||||||||    
T  2626556 acaagaggctgtttccaggacttgaacccgtgacctttc 2626518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 39460995 - 39461133
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| ||||| |||||||  | ||||||||||||||| ||||| ||||||||||||    
T  39460995 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtattgtacgcagccttactctgttttttaca 39461094  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||||| || || ||||||  |||||||||||    
T  39461095 caagaggctgtttccaggacttgaacccgtgacctttca 39461133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 105 - 243
Target Start/End: Complemental strand, 22598292 - 22598155
Alignment:
Q  105 ataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    ||||||||  ||||||||||||||| ||||||||||| |||| | | ||||||||| ||||| || |||||||||||  || ||||||||||||||||||    
T  22598292 ataagggctgcctggtgcactaaag-tcccgcatacgcaaggtccgggaaagggtctcaccaattggtgtattgtacatagccttaccctgttttttaca 22598194  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||| ||||| || |||||||||  |||||||||||    
T  22598193 caagaggttgtttccaggatttgaacccgtgacctttca 22598155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 35261813 - 35261703
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| |||||||||||||||||||||||| | || |   ||| |||||||||||||| ||||||||||||||  ||||||||||||||||||||    
T  35261813 aagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttttacaca 35261714  T
Q  207 agaggctgttt 217  Q
    |||| ||||||    
T  35261713 agagactgttt 35261703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 12626024 - 12625913
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtt-ttttacac 205  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||  |||||||||||||| |||||||||| |||||||||||||||| ||||||||    
T  12626024 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggagggggtcccaccatttggtgtattgtatgcagtcttaccctgtttttttacac 12625925  T
Q  206 aagaggctgttt 217  Q
    |||||| |||||    
T  12625924 aagaggttgttt 12625913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 13160835 - 13160726
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| || ||||| ||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||| |||||||||| |||||||||    
T  13160835 aagggcaacccggcgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacaca 13160737  T
Q  207 agaggctgttt 217  Q
    |||||||||||    
T  13160736 agaggctgttt 13160726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 12670251 - 12670385
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    ||||| |||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  12670251 aagggtaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 12670348  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||| || || ||||||  |||||||||||    
T  12670349 agaggctgtttccaggacttgaacccgtgacctttca 12670385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 240
Target Start/End: Complemental strand, 26954269 - 26954133
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccat--ttagtgtattgtacgcagtcttaccctg-ttttttac 203  Q
    ||||||||||  ||||||||||||||||||||| |  ||| ||| ||| ||||||||||||  || ||||||||||||||| ||||||||| ||||||||    
T  26954269 aagggcaacccagtgcactaaagctcccgcatatgcgaggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttttac 26954170  T
Q  204 acaagaggctgtttacacgatttgaacttgtgacctt 240  Q
    |||||||||||||| || || ||||||  ||||||||    
T  26954169 acaagaggctgtttccaggacttgaacccgtgacctt 26954133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 107 - 240
Target Start/End: Complemental strand, 6760958 - 6760823
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||| |||||||||||||||||||||| |   || | | ||| |||||||||||||  | |||||||||||| || ||||||||||||||||||    
T  6760958 aagggcaacccggtgcactaaagctcccgcatatgcggggtccgagaaggggtcccaccattattggtgtattgtacgaagccttaccctgttttttaca 6760859  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctt 240  Q
    ||||||||||||| || || ||||||  ||||||||    
T  6760858 caagaggctgtttccaggacttgaacccgtgacctt 6760823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 107 - 242
Target Start/End: Complemental strand, 17823710 - 17823575
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| |||||||||||||||| ||||| | | ||   | ||| |||| ||||||||| ||||||| |||||||||||| |||| ||||||||||    
T  17823710 aagggcaacccggtgcactaaagctcctgcatatgcagggttcgggaaggggttccaccatttggtgtattttacgcagtcttatcctggtttttacaca 17823611  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttc 242  Q
    ||||||||||| || || ||||||  ||||||||||    
T  17823610 agaggctgtttccaggacttgaacccgtgacctttc 17823575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 110 - 243
Target Start/End: Original strand, 18164764 - 18164896
Alignment:
Q  110 ggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaaga 209  Q
    ||||||| |||||||||||||||||||||||| | || | | |||| |||| || | ||| ||||||||||||||  ||||||||| |||||||||||||    
T  18164764 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaatggtcacatcctttggtgtattgtacgcaaccttaccctg-tttttacacaaga 18164862  T
Q  210 ggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||| || || ||||||  |||||||||||    
T  18164863 ggctgtttccaggacttgaacccgtgacctttca 18164896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 30454098 - 30454232
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| |||||| |||||||| |||||| ||  |||||||||    
T  30454098 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatcgtacgcagccttaccttg--ttttacaca 30454195  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||| || || ||||||  |||||||||||    
T  30454196 agaggctgtttccaggacttgaacccgtgacctttca 30454232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 230
Target Start/End: Complemental strand, 5689754 - 5689642
Alignment:
Q  118 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    ||||||||||||||||| |||||| | ||   | ||| |||| ||||||||| ||||||||||||||| ||||||||| ||||||||||||||||| |||    
T  5689754 ggtgcactaaagctcccacatacgcatggttcgggaaggggttccaccatttggtgtattgtacgcagccttaccctgctttttacacaagaggctattt 5689655  T
Q  218 acacgatttgaac 230  Q
    ||| || ||||||    
T  5689654 acaagacttgaac 5689642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 230
Target Start/End: Original strand, 8483950 - 8484062
Alignment:
Q  118 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    ||||| |||||||||||||||||| | || ||| ||  ||||||||||| || ||||||||||||||| ||| ||||||||||||||||||||| |||||    
T  8483950 ggtgccctaaagctcccgcatacgcagggtctgggatggggtcccaccaattggtgtattgtacgcagccttgccctgttttttacacaagaggttgttt 8484049  T
Q  218 acacgatttgaac 230  Q
     || || ||||||    
T  8484050 ccaggacttgaac 8484062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 107 - 230
Target Start/End: Original strand, 5135291 - 5135413
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    ||||||| || ||||||| |||||||| ||||||| | || | | ||| |||||||||||||| ||||||||||| ||| |||||||| |||||||||||    
T  5135291 aagggcagcccggtgcac-aaagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctcttttttacaca 5135389  T
Q  207 agaggctgtttacacgatttgaac 230  Q
    ||||||||||| || || ||||||    
T  5135390 agaggctgtttccaggacttgaac 5135413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 10857963 - 10857852
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacac 205  Q
    |||||||||| |||||||||||||||||||||||| |||| |   |||  |||||||||| || ||||||||| ||||| ||||||||| ||||||||||    
T  10857963 aagggcaacccggtgcactaaagctcccgcatacgcaaggtccaggaagtggtcccaccaattggtgtattgtgcgcagccttaccctgtttttttacac 10857864  T
Q  206 aagaggctgttt 217  Q
    ||||||| ||||    
T  10857863 aagaggcggttt 10857852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 107 - 217
Target Start/End: Original strand, 8897765 - 8897875
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| |||||| ||||||||||||||| | | || | | ||| |||||||||||||| |||||||||||| || |||||||| |||||||||||    
T  8897765 aagggcaaccgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgtagccttaccctattttttacaca 8897864  T
Q  207 agaggctgttt 217  Q
    || || |||||    
T  8897865 agcggttgttt 8897875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 98 - 217
Target Start/End: Complemental strand, 20870068 - 20869947
Alignment:
Q  98 aaaaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctg 195  Q
    ||||| || |||||||||| |||||||||||||||||||||| |   || |   ||| |||||||||||||  | ||||||||||||||| |||||||||    
T  20870068 aaaaaaaaaaagggcaacccggtgcactaaagctcccgcatatgcggggtcctggaaggggtcccaccattattggtgtattgtacgcagccttaccctg 20869969  T
Q  196 ttttttacacaagaggctgttt 217  Q
    ||||||||||||||| ||||||    
T  20869968 ttttttacacaagagactgttt 20869947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 14018019 - 14018106
Alignment:
Q  157 ggtcccacca-tttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||| || || ||||||   ||||||||||    
T  14018019 ggtcccaccaatttagtgtattgtacgcagtctcaccctgttttttacacaagagactgtttccaagacttgaacccatgacctttca 14018106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 215
Target Start/End: Complemental strand, 16225155 - 16225045
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||| ||||| |||||||||||||||||||||| |   || | | ||| || ||||||||||  | ||||||||||||||||||||||||||||||||||    
T  16225155 aaggacaacccggtgcactaaagctcccgcatatgcggggtccgggaagggatcccaccattattggtgtattgtacgcagtcttaccctgttttttaca 16225056  T
Q  205 caagaggctgt 215  Q
     ||||||||||    
T  16225055 taagaggctgt 16225045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 230
Target Start/End: Original strand, 7136528 - 7136653
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    ||||| |||| |||||||||||||||||||||| |   || | | ||| |||||||||||||  | ||||||||||||||| ||||||||| ||||||||    
T  7136528 aagggtaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctggtttttaca 7136627  T
Q  205 caagaggctgtttacacgatttgaac 230  Q
    ||||||| ||||| || || ||||||    
T  7136628 caagaggttgtttccaggacttgaac 7136653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 243
Target Start/End: Original strand, 20284075 - 20284210
Alignment:
Q  112 caacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccat--ttagtgtattgtacgcagtcttaccc--tgttttttacacaa 207  Q
    ||||| ||||||||||| |||||||||||| | || | | ||| ||||||||||||  || ||||||||||||||| |||||||  | ||||||| ||||    
T  20284075 caacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttacccttttttttttatacaa 20284174  T
Q  208 gaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||||| || || ||||||  |||||||||||    
T  20284175 gaggctgtttccaggacttgaacccgtgacctttca 20284210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 24365079 - 24365171
Alignment:
Q  126 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacacaagaggctgttt 217  Q
    ||||||||| |||||| | || | | ||| |||||||||||||| ||||||||| ||||| ||||||||| ||||||||||||||||||||||    
T  24365079 aaagctcccacatacgcagggtccgggaaggggtcccaccatttggtgtattgttcgcagccttaccctgattttttacacaagaggctgttt 24365171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 107 - 240
Target Start/End: Complemental strand, 25250658 - 25250523
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||| ||||||||||| |||||||||| |   ||   | ||| |||||||||||||  | ||||||||||||||| | |||||| |||||||||    
T  25250658 aagggcaacccggtgcactaaatctcccgcatatgcggggttcgggaaggggtcccaccattattggtgtattgtacgcagccataccctattttttaca 25250559  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctt 240  Q
    ||| ||||||||| || || |||||| |||||||||    
T  25250558 caataggctgtttccaggacttgaacatgtgacctt 25250523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 31457306 - 31457171
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||| | ||||||||| |||||||||||||| | ||  || ||| |||||| |||||||  |||||||||||||| |||  |||  ||||||||||    
T  31457306 aagggcaatccggtgcactagagctcccgcatacgcagggtttgggaaggggtcctaccatttgatgtattgtacgcagccttttcct-atttttacaca 31457208  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||| |||||||| || ||||||  |||||||||||    
T  31457207 agaggttgtttacaggacttgaacccgtgacctttca 31457171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 243
Target Start/End: Original strand, 21070703 - 21070839
Alignment:
Q  112 caacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccat--ttagtgtattgtacgcagtcttaccc---tgttttttacaca 206  Q
    ||||| ||||||||||| |||||||||||| | || | | ||| ||||||||||||  || ||||||||||||||| |||||||   | ||||||| |||    
T  21070703 caacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctttttttttttataca 21070802  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||| || || ||||||  |||||||||||    
T  21070803 agaggctgtttccaggacttgaacccgtgacctttca 21070839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 243
Target Start/End: Original strand, 44781517 - 44781643
Alignment:
Q  119 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtt 216  Q
    ||||||||||||||||||||||| | || ||| ||  |||||||| |||||   ||||||||||| ||| |||||||||| |||||||||||||| ||||    
T  44781517 gtgcactaaagctcccgcatacgcagggtctgggacggggtcccaacatttttggtgtattgtacacagccttaccctgtcttttacacaagaggttgtt 44781616  T
Q  217 tacacgatttgaacttgtgacctttca 243  Q
    | || || ||||||  |||| ||||||    
T  44781617 tccaggacttgaacccgtgaactttca 44781643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 206
Target Start/End: Original strand, 44742521 - 44742619
Alignment:
Q  109 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacaca 206  Q
    ||||| || |||||||||| |||||||||| |||| || |   ||| |||||||||||||| | |||||||||||||| ||||||||||||||||||||    
T  44742521 gggcaccccggtgcactaatgctcccgcatccgtagggtccaagaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttttacaca 44742619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 242
Target Start/End: Complemental strand, 389768 - 389642
Alignment:
Q  118 ggtgcactaaagctcccgcatacgtaagggctgcgaaaggg-tcccaccatttagtgtattgtacgcagtcttaccctgtttttt--acacaagaggctg 214  Q
    ||||||||||||||| |||||||| | || | | ||||||| ||||| ||||| ||||||||||||||  |||||||||||||||  |||||||||| ||    
T  389768 ggtgcactaaagctctcgcatacgcagggtcag-gaaagggatcccatcatttggtgtattgtacgcaaccttaccctgtttttttgacacaagagggtg 389670  T
Q  215 tttacacgatttgaacttgtgacctttc 242  Q
    ||| || || ||||||  ||||||||||    
T  389669 tttccaggacttgaacccgtgacctttc 389642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 17250888 - 17250985
Alignment:
Q  119 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttacacaagaggctg 214  Q
    |||||||||||||||  |||||| | ||   | |||||||||||||||||  | ||||||||||||| | |||| |||||||||||||||||||||||    
T  17250888 gtgcactaaagctccttcatacgcagggttcgggaaagggtcccaccattattggtgtattgtacgctgccttaacctgttttttacacaagaggctg 17250985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 23286374 - 23286432
Alignment:
Q  155 agggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgt 215  Q
    ||||||||||||||| |||||||||||||||  ||||||||  ||||||||||||||||||    
T  23286374 agggtcccaccatttggtgtattgtacgcagctttaccctg--ttttacacaagaggctgt 23286432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 207
Target Start/End: Original strand, 40604918 - 40605006
Alignment:
Q  118 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaa 207  Q
    ||||||||||||||||||||||||| |||| | || |||||  ||| ||||||||||||||||||||  |||| ||  ||||||||||||    
T  40604918 ggtgcactaaagctcccgcatacgt-agggtttcggaagggatccatcatttagtgtattgtacgcaaccttatccaattttttacacaa 40605006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 43942411 - 43942348
Alignment:
Q  156 gggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    ||||||||||||||   ||||||||||||||| |||||||||||||| ||| ||||||||||||    
T  43942411 gggtcccaccatttttggtgtattgtacgcagccttaccctgtttttgacataagaggctgttt 43942348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 35106008 - 35105921
Alignment:
Q  157 ggtcccaccatt-tagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||||||| | ||||||||||||||| ||||| || | |||||||||||||| ||||| || || ||||||  |||||||||||    
T  35106008 ggtcccaccattctggtgtattgtacgcagccttacactctcttttacacaagaggttgtttccaggacttgaacccgtgacctttca 35105921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 28407537 - 28407475
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattt 169  Q
    |||||||||| |||||| ||||||||||||||||||| || | | ||| ||||||||||||||    
T  28407537 aagggcaacccggtgcagtaaagctcccgcatacgtagggtccgggaaggggtcccaccattt 28407475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 11748366 - 11748297
Alignment:
Q  174 tattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||||| ||||||||||| |||||||| |||||||||||| || || ||||||  ||||| |||||    
T  11748366 tattgtacgctgtcttaccctgctttttacaaaagaggctgtttccaagacttgaacccgtgacatttca 11748297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 20869563 - 20869633
Alignment:
Q  171 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||| ||| |||||||||||||  |||||||||||||||| || || ||||||  |||||||||||    
T  20869563 gtgtattgtacacagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttca 20869633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 180
Target Start/End: Complemental strand, 26102651 - 26102578
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgta 180  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||    
T  26102651 aagggcaacccggtgcactagagctcccgcataagcagggtccgggaaggggtcccaccatttggtgtattgta 26102578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 16013590 - 16013511
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca--tttagtgtattgtacgca 184  Q
    |||| ||||| |||||||||||||||||||||| | | || ||| ||| ||||| |||||  ||||||||||||||||||    
T  16013590 aaggacaacccggtgcactaaagctcccgcataggcagggtctgggaaggggtcgcaccatttttagtgtattgtacgca 16013511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 199
Target Start/End: Complemental strand, 19729462 - 19729382
Alignment:
Q  119 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttt 199  Q
    |||||||| |||||||| ||| | | || | | ||| |||||||||||||| ||||||||||| ||| |||||||||||||    
T  19729462 gtgcactagagctcccgtatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctgtttt 19729382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 30962847 - 30962910
Alignment:
Q  180 acgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||| || ||||| |||||||||||||||||||||| || || ||||| | |||||||||||    
T  30962847 acgcagcctaaccctattttttacacaagaggctgtttccaggacttgaagtcgtgacctttca 30962910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 217
Target Start/End: Original strand, 23000229 - 23000329
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||||||||||||||| ||          ||| |||||||||||||| |||||||||| | |  |||||| || ||||||||||    
T  23000229 aagggcaacccggtgcactaaagctcccgcatccgg---------gaaggggtcccaccatttggtgtattgtatggaaccttaccgtg-tttttacaca 23000318  T
Q  207 agaggctgttt 217  Q
    |||||||||||    
T  23000319 agaggctgttt 23000329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 141
Target Start/End: Original strand, 27468093 - 27468127
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacg 141  Q
    |||||||||| ||||||||||||||||||||||||    
T  27468093 aagggcaacccggtgcactaaagctcccgcatacg 27468127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 243
Target Start/End: Complemental strand, 36918199 - 36918122
Alignment:
Q  166 atttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||| ||||||||||| ||| |||||||||||||||||| ||||   ||||| ||  | |||||| ||||||||||||    
T  36918199 atttggtgtattgtacacagccttaccctgttttttacataagaaattgtttccagaacttgaacatgtgacctttca 36918122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 141
Target Start/End: Complemental strand, 27508046 - 27508010
Alignment:
Q  105 ataagggcaacctggtgcactaaagctcccgcatacg 141  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  27508046 ataaggacaacccggtgcactaaagctcccgcatacg 27508010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 42083748 - 42083836
Alignment:
Q  156 gggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||||||||| | | || ||||||||| ||| |||  |||||||||||| ||||||||| || || ||||||  |||||||||||    
T  42083748 gggtcccaccattttggtatactgtacgcagccttgccccattttttacacaaaaggctgtttccaggacttgaacccgtgacctttca 42083836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 107 - 240
Target Start/End: Original strand, 8455317 - 8455450
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| |||||||||||||||| ||||||| | || | | ||| |||||||||||||| ||||||||||||||| |||||||||| |||||||||    
T  8455317 aagggcaacccggtgcactaaagctccggcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtgttttacaca 8455416  T
Q  207 agaggctgtttacacgatttgaacttgtgacctt 240  Q
    ||||||||||| || || ||||||  ||||||||    
T  8455417 agaggctgtttccaggacttgaacccgtgacctt 8455450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 107 - 230
Target Start/End: Complemental strand, 9671313 - 9671192
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  9671313 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 9671216  T
Q  207 agaggctgtttacacgatttgaac 230  Q
    ||||||||||| || |||||||||    
T  9671215 agaggctgtttccaggatttgaac 9671192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 115 - 243
Target Start/End: Original strand, 32781298 - 32781425
Alignment:
Q  115 cctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctg 214  Q
    |||||||||| |||||||||||||||  | || ||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  32781298 cctggtgcac-aaagctcccgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggttg 32781396  T
Q  215 tttacacgatttgaacttgtgacctttca 243  Q
    ||| |  || ||||||| |||||||||||    
T  32781397 tttccgagacttgaactcgtgacctttca 32781425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 10543834 - 10543696
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| ||||||||||||||   ||||||||||||||| ||||||||||||||||||    
T  10543834 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttaca 10543735  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||| |||| || || ||||||  |||||||||||    
T  10543734 caagaggccgtttccaggacttgaacccgtgacctttca 10543696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 10546297 - 10546160
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtt-ttttacac 205  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||| ||||||||||| ||||| ||    
T  10546297 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttttatac 10546198  T
Q  206 aagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||| ||||| || || ||||||  |||||||||||    
T  10546197 aagaggatgtttccaggacttgaacccgtgacctttca 10546160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 107 - 240
Target Start/End: Complemental strand, 11514569 - 11514437
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||| | |||||||||||||||||||||||| | || ||| ||| |||||||||||||| ||||||||||||||| |||||  |||||||||||||    
T  11514569 aagggcaatccggtgcactaaagctcccgcatacgcagggtctgggaa-gggtcccaccatttggtgtattgtacgcagccttactttgttttttacaca 11514471  T
Q  207 agaggctgtttacacgatttgaacttgtgacctt 240  Q
    ||||||||||| || || ||||||  ||||||||    
T  11514470 agaggctgtttccaggagttgaacccgtgacctt 11514437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 107 - 240
Target Start/End: Complemental strand, 14444862 - 14444730
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    ||||||||||||||||||||||||||||||||||| | || | | ||| |||||||||||||| |||||| |||| ||| |||||||||| |||||||||    
T  14444862 aagggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtatcgtacacagccttaccctgt-ttttacaca 14444764  T
Q  207 agaggctgtttacacgatttgaacttgtgacctt 240  Q
    ||||||||||| || || ||||||  ||||||||    
T  14444763 agaggctgtttccaggacttgaacccgtgacctt 14444730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 14530454 - 14530316
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||  | |||||||||||| || |||||||||||||||| |    
T  14530454 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgtagccttaccctgttttttata 14530355  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||||| || || ||||||  |||||||||||    
T  14530354 caagaggctgtttccaggacttgaacccgtgacctttca 14530316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 217
Target Start/End: Original strand, 40762235 - 40762345
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||||||||||| |||||| | || |   |||||||||||||||||| |||||||||||| || ||||||| ||||||||||||    
T  40762235 aagggcaacccggtgcactaaagctcccacatacgcagggtccaggaaagggtcccaccatttggtgtattgtacgtagccttacccagttttttacaca 40762334  T
Q  207 agaggctgttt 217  Q
    |||||||||||    
T  40762335 agaggctgttt 40762345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 36871625 - 36871517
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||| ||||||||| |||| |||||    
T  36871625 aagggcaacccggtgcactaaagctcccgcatacgca-ggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttcacaca 36871528  T
Q  207 agaggctgttt 217  Q
    |||||||||||    
T  36871527 agaggctgttt 36871517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 107 - 206
Target Start/End: Complemental strand, 25632643 - 25632544
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| |||||||||||||||||||||||||||||   | ||| |  ||||||||||| ||||||||||||||| |||| |||||||||||||||    
T  25632643 aagggcaacccggtgcactaaagctcccgcatacgtaaggttcgggaaggaatcccaccatttggtgtattgtacgcagccttatcctgttttttacaca 25632544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 21779262 - 21779396
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||  |||||||||  |||||||||    
T  21779262 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg--ttttacaca 21779359  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||| | || || ||||||  |||||||||||    
T  21779360 agaggctgtctccaggacttgaacccgtgacctttca 21779396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 23397898 - 23397764
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||| |||||||||||| ||| || | | ||| |||||||||||||| |||||||||||| || |||||||  | |||||||||    
T  23397898 aagggcaacccggtgcactagagctcccgcatatgtagggtccgagaaggggtcccaccatttggtgtattgtacgtagccttaccc--tattttacaca 23397801  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||| || || ||||||   ||||||||||    
T  23397800 agaggctgtttccaggacttgaacccatgacctttca 23397764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 12023969 - 12024055
Alignment:
Q  156 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||| || || ||||||  |||||||||||    
T  12023969 gggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacttgaacccgtgacctttca 12024055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 23145744 - 23145835
Alignment:
Q  152 gaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||||||| || ||||||||||||||| ||||| |||||||||||||||||| |||||| || || ||||||  |||||||||||    
T  23145744 gaaagggtcccaccaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttca 23145835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 23557534 - 23557625
Alignment:
Q  152 gaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||||||| || ||||||||||||||| ||||| |||||||||||||||||| |||||| || || ||||||  |||||||||||    
T  23557534 gaaagggtcccaccaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttca 23557625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 24200624 - 24200762
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||| ||||||||||||||| | |||||  | || | | ||| || |||||||||||   ||||||||||||||| ||||||||||||||||||    
T  24200624 aagggcaacccggtgcactaaagctctcacatactcagggtccgggaagggttcccaccatttttggtgtattgtacgcagccttaccctgttttttaca 24200723  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||||| || || ||||||  ||||| |||||    
T  24200724 caagaggctgtttccaggacttgaacccgtgacttttca 24200762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 98 - 240
Target Start/End: Original strand, 25249730 - 25249871
Alignment:
Q  98 aaaaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtt 197  Q
    ||||| || |||||||||| ||||||||||||||| |||||||| | ||   | ||| || ||||||||||| ||||||||||||||| ||||||||| |    
T  25249730 aaaaaaaaaaagggcaacccggtgcactaaagctcacgcatacgcagggttcgggaagggatcccaccatttggtgtattgtacgcagccttaccctg-t 25249828  T
Q  198 ttttacacaagaggctgtttacacgatttgaacttgtgacctt 240  Q
    || |||||||||| |||||| || || ||||||  ||||||||    
T  25249829 ttgtacacaagagactgtttccatgacttgaacccgtgacctt 25249871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 30826169 - 30826061
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||| ||| |||||||||||||||||||||||| ||| || ||| ||| |||| ||||||||| ||||||||||||||  ||||||||  ||||||||||    
T  30826169 aaggacaatctggtgcactaaagctcccgcatatgtagggtctgggaa-gggttccaccatttggtgtattgtacgcaaccttaccct-atttttacaca 30826072  T
Q  207 agaggctgttt 217  Q
    |||||||||||    
T  30826071 agaggctgttt 30826061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 240
Target Start/End: Complemental strand, 17668136 - 17668003
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| |||||||||||||||||  ||||| | ||   | ||| |||| ||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  17668136 aagggcaacccggtgcactaaagctcccatatacgcagggttcgagaaggggttccaccatttggtgtattgtacgcagccttaccctgatttttacaca 17668037  T
Q  207 agaggctgtttacacgatttgaacttgtgacctt 240  Q
    ||||| | ||| || || ||||||  ||||||||    
T  17668036 agaggttctttccaggacttgaacccgtgacctt 17668003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 242
Target Start/End: Original strand, 19977715 - 19977850
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    ||||| || |||||||||||||||||||||||||  ||||   | ||| || ||||||||||| ||||||||||||||  |||| ||| ||||||||| |    
T  19977715 aagggtaatctggtgcactaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgcaaccttatcctattttttacaaa 19977814  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttc 242  Q
    ||||||||||| ||  | ||||||  ||||||||||    
T  19977815 agaggctgtttccagaacttgaacccgtgacctttc 19977850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 14544200 - 14544087
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtg--tattgtacgcagtcttaccctgttttt-tac 203  Q
    ||||||||| ||||||||||||||||||||||||| | || |   ||| |||||| |||||||  ||  ||||| ||||||||||||||||||||| |||    
T  14544200 aagggcaacttggtgcactaaagctcccgcatacgcagggtcccggaaggggtccgaccattttttggttattgcacgcagtcttaccctgtttttctac 14544101  T
Q  204 acaagaggctgttt 217  Q
    ||||||||||||||    
T  14544100 acaagaggctgttt 14544087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 118 - 217
Target Start/End: Original strand, 31158451 - 31158552
Alignment:
Q  118 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttacacaagaggctgt 215  Q
    |||| ||||||||||||||||||| | || ||| ||| ||||||||||||||   || ||||||| ||| |||||||||||||||||| |||||||||||    
T  31158451 ggtgtactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttttggtttattgtatgcaatcttaccctgttttttacgcaagaggctgt 31158550  T
Q  216 tt 217  Q
    ||    
T  31158551 tt 31158552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 217
Target Start/End: Original strand, 4516354 - 4516462
Alignment:
Q  109 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaag 208  Q
    ||||| || ||| |||||||||| || |||||| | || | | ||| ||||||||||| || |||||||||||||||  || ||||||||||||||||||    
T  4516354 gggcagcccggtacactaaagcttccacatacgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagcgttgccctgttttttacacaag 4516453  T
Q  209 aggctgttt 217  Q
    |||||||||    
T  4516454 aggctgttt 4516462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 17896394 - 17896283
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccct-gttttttacac 205  Q
    |||||||||  | ||||||||||||||| |||||| | || | | ||| |||||||||||||| || |||||||||||| ||||||||  ||||||||||    
T  17896394 aagggcaactcgatgcactaaagctcccacatacgcagggtccgagaaggggtcccaccatttggtatattgtacgcagccttaccctatttttttacac 17896295  T
Q  206 aagaggctgttt 217  Q
    |||||| |||||    
T  17896294 aagaggttgttt 17896283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 21377123 - 21377210
Alignment:
Q  156 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||||||||| ||| ||||||| ||| ||||||||||||||||||||||||| |||||  | || ||||||| || ||||||||    
T  21377123 gggtcccaccatttggtgcattgtacccagccttaccctgttttttacacaagaggatgtttctatgacttgaactcgtaacctttca 21377210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 217
Target Start/End: Original strand, 25079718 - 25079829
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacac 205  Q
    |||||||||| |||||||||||||||  ||||||| | || | | ||| |||||||||||||  ||||||||||||||  |||||| || ||||||||||    
T  25079718 aagggcaacccggtgcactaaagctcttgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcatccttaccttgtttttttacac 25079817  T
Q  206 aagaggctgttt 217  Q
    |||||| |||||    
T  25079818 aagaggttgttt 25079829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 217
Target Start/End: Original strand, 39914307 - 39914417
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacac 205  Q
    |||||||||| | |||||||||||||||||||||| | || | | ||| |||||||||||||  ||||||||||| ||  ||||||||| ||||||||||    
T  39914307 aagggcaacccgatgcactaaagctcccgcatacgcagggtcag-gaaggggtcccaccattcggtgtattgtacacatccttaccctgtttttttacac 39914405  T
Q  206 aagaggctgttt 217  Q
    |||||| |||||    
T  39914406 aagaggttgttt 39914417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 243
Target Start/End: Original strand, 99281 - 99400
Alignment:
Q  122 cactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacac 221  Q
    |||||||||||||||||||  | || ||| ||| |||| ||||||||| ||||||||||||||| ||| || ||||||||  ||||||||||||||  |     
T  99281 cactaaagctcccgcatacacagggtctgagaaggggttccaccatttggtgtattgtacgcagccttgccatgtttttt--acaagaggctgtttctag 99378  T
Q  222 gatttgaacttgtgacctttca 243  Q
    || ||||||  |||||||||||    
T  99379 gacttgaacccgtgacctttca 99400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 17623698 - 17623588
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    ||||||||||  ||||||||||||| || |||||| | |    | ||| |||| ||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  17623698 aagggcaacccagtgcactaaagcttccacatacgcaggattcgggaaggggttccaccatttggtgtattgtacgcagccttaccctgatttttacaca 17623599  T
Q  207 agaggctgttt 217  Q
    ||||| |||||    
T  17623598 agaggttgttt 17623588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 44643657 - 44643563
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttttt 201  Q
    ||||||| || |||||||||| ||||||||||||| | || ||| ||| |||||||||||||| ||  ||||||||||| ||||| |||||||||    
T  44643657 aagggcagcccggtgcactaaggctcccgcatacgcagggtctgggaaggggtcccaccatttggtacattgtacgcagccttactctgtttttt 44643563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 216
Target Start/End: Complemental strand, 27573754 - 27573646
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| | ||||||||||||||| |||||  | ||  || |||| ||| ||||||||| ||||||||||||||| |||||| || ||| ||||||    
T  27573754 aagggcaacccgatgcactaaagctcccacatacacagggtttgggaaatggttccaccatttggtgtattgtacgcagccttaccatg-tttatacaca 27573656  T
Q  207 agaggctgtt 216  Q
    ||||||||||    
T  27573655 agaggctgtt 27573646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 240
Target Start/End: Original strand, 40416872 - 40417005
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||||||||| |||||| | | || |    ||||||||||| || || ||||||||||| ||| ||| |||||||||||| |||    
T  40416872 aagggcaacccggtgcactaaagctctcgcatatgcagggtccaaaaaagggtcccatcaattggtgtattgtacacagcctttccctgttttttataca 40416971  T
Q  207 agaggctgtttacacgatttgaacttgtgacctt 240  Q
    ||||| ||||| || || ||||||  ||||||||    
T  40416972 agaggttgtttccatgacttgaacccgtgacctt 40417005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 5450371 - 5450283
Alignment:
Q  156 gggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||||| ||| ||||||||||||||| |||||| || |||||||||||||||| ||||| || || ||||||  |||||||||||    
T  5450371 gggtcccaccctttggtgtattgtacgcagccttaccatgtttttttacacaagaggttgtttccaggaattgaacccgtgacctttca 5450283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 243
Target Start/End: Complemental strand, 7214667 - 7214532
Alignment:
Q  110 ggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttacacaa 207  Q
    ||||||||||||||||||| ||| |||||||| |  | | | ||| || || ||||||||   ||||||||||||||| |||||||||| ||||||||||    
T  7214667 ggcaacctggtgcactaaaactctcgcatacgcagtgtccgagaagggatctcaccattttttgtgtattgtacgcagccttaccctgtattttacacaa 7214568  T
Q  208 gaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||| |||||| || || ||||||   ||||||||||    
T  7214567 gagactgtttccaagacttgaacccatgacctttca 7214532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 243
Target Start/End: Original strand, 45235820 - 45235955
Alignment:
Q  109 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtt-ttttacacaa 207  Q
    ||||||| |||| |||||||||||| ||||||||| || |||  || |||||||||||||| |||||||  ||| || |||||||| || ||||||| ||    
T  45235820 gggcaacttggtacactaaagctcctgcatacgtagggtctggtaaggggtcccaccattttgtgtattacacgtagccttaccctattattttacagaa 45235919  T
Q  208 gaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||| ||||||  | || ||||||| |||| ||||||    
T  45235920 gagactgtttctaggacttgaactcgtgatctttca 45235955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 44521392 - 44521510
Alignment:
Q  125 taaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgat 224  Q
    ||||||||||| ||| | || | ||| ||| || |||| |||||| ||||||| || |||| |||||| |||||||||||||||||  ||||| || |||    
T  44521392 taaagctcccgtatatgcaatgtctgggaagggctcccgccatttggtgtattatatgcagccttaccttgttttttacacaagagattgtttccaagat 44521491  T
Q  225 ttgaacttgtgacctttca 243  Q
    ||||||  |||||||||||    
T  44521492 ttgaacgcgtgacctttca 44521510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 5841164 - 5841052
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||  |||||||||||||||||||||| |   || | | ||| |||||||||||||  |  |||||||||||||  |||||||| |||||||||    
T  5841164 aagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattgatgtattgtacgcatccttaccctattttttaca 5841065  T
Q  205 caagaggctgttt 217  Q
    ||| |||||||||    
T  5841064 caaaaggctgttt 5841052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 19615059 - 19614990
Alignment:
Q  174 tattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||||||||||||||||||||| |||||||| |||||  | || ||||||  |||||||||||    
T  19615059 tattgtacgcagtcttaccctgttttttatacaagaggatgtttcaaggacttgaacccgtgacctttca 19614990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 22371139 - 22371059
Alignment:
Q  156 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacct 239  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||   ||| |||||||||| || || ||||||  |||||||    
T  22371139 gggtcccaccatttggtgtattgtacgcagccttaccctgttttt---acacgaggctgtttccaggacttgaacccgtgacct 22371059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 242
Target Start/End: Original strand, 12315712 - 12315787
Alignment:
Q  166 atttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttc 242  Q
    |||| ||||||||||| |||||||||||||||||||| | |||| ||||||| || || ||||||| ||||||||||    
T  12315712 atttggtgtattgtacacagtcttaccctgtttttta-ataagaagctgtttccatgacttgaactcgtgacctttc 12315787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 29419970 - 29420026
Alignment:
Q  187 cttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||||||||||||||||| ||||| || || ||||||| |||||||||||    
T  29419970 cttaccctgttttttacacaagaggttgtttccaggacttgaactcgtgacctttca 29420026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 243
Target Start/End: Original strand, 26684632 - 26684759
Alignment:
Q  118 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccct-gttttttacacaagagg-ctgt 215  Q
    |||||| ||||||||||||||||| | ||   | |||  |||||||||||||||| |||||||||||| |||||| |  |||||||||||||||| ||||    
T  26684632 ggtgcattaaagctcccgcatacgcagggttcgggaagaggtcccaccatttagtatattgtacgcagccttaccatatttttttacacaagaggtctgt 26684731  T
Q  216 ttacacgatttgaacttgtgacctttca 243  Q
    || || || || ||| | ||||||||||    
T  26684732 tttcaggacttaaacctttgacctttca 26684759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 24890533 - 24890451
Alignment:
Q  119 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttttt 201  Q
    ||||||||||||||| ||||||| | || | | ||| ||||||||||| || |||||||||| |||| |||||| ||||||||    
T  24890533 gtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccaattggtgtattgtatgcagccttaccttgtttttt 24890451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 243
Target Start/End: Complemental strand, 33795400 - 33795283
Alignment:
Q  126 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtatt-gtacgcagtcttaccctgttttttacacaagaggctgtttacacgat 224  Q
    |||||||||||||||  | || ||| ||| ||||||||||||   ||||||| |||||||| ||||||||||||||||| ||||||| ||||| |  ||     
T  33795400 aaagctcccgcatacacagggtctgggaaggggtcccaccatag-gtgtatttgtacgcagccttaccctgttttttacccaagaggttgtttccgggac 33795302  T
Q  225 ttgaacttgtgacctttca 243  Q
    ||||||  |||||||||||    
T  33795301 ttgaacccgtgacctttca 33795283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 13245096 - 13245181
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttacc 192  Q
    |||||||||| | | |||||||||||||| ||| | | || | | ||| |||||||||||||||||||| ||||||||| ||||||    
T  13245096 aagggcaacccgatacactaaagctcccgtatatgcatggtccgggaaggggtcccaccatttagtgtaatgtacgcagccttacc 13245181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 217
Target Start/End: Complemental strand, 17471673 - 17471572
Alignment:
Q  118 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctg-ttttttacacaagaggctgt 215  Q
    ||||||||||| |||||||||| | | || | | ||| ||||| || ||||| | | ||||||||||||||||| |||| ||||||||||||||||||||    
T  17471673 ggtgcactaaaactcccgcataggcagggtcagggaaggggtctcatcattttggtatattgtacgcagtcttatcctgtttttttacacaagaggctgt 17471574  T
Q  216 tt 217  Q
    ||    
T  17471573 tt 17471572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 31821393 - 31821478
Alignment:
Q  156 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||| ||||| ||||||||||| ||  |||||||| |||||||||||   ||||||||  |||| ||||||| |||||||||||    
T  31821393 gggtcccatcatttggtgtattgtacacaaccttaccctattttttacaca--cggctgtttctacgacttgaactcgtgacctttca 31821478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 140
Target Start/End: Original strand, 40579747 - 40579783
Alignment:
Q  104 aataagggcaacctggtgcactaaagctcccgcatac 140  Q
    ||||||||||||| |||||||||||||||||||||||    
T  40579747 aataagggcaacccggtgcactaaagctcccgcatac 40579783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 15296475 - 15296518
Alignment:
Q  174 tattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    |||||||||||| |||||||||| |||||||||| |||||||||    
T  15296475 tattgtacgcagccttaccctgtattttacacaacaggctgttt 15296518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 185
Target Start/End: Original strand, 24860000 - 24860067
Alignment:
Q  118 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcag 185  Q
    |||||||||||||||||||||||| | || | | ||| |||| | ||||||| |||||||||||||||    
T  24860000 ggtgcactaaagctcccgcatacgcagggtccgagaaggggttctaccatttggtgtattgtacgcag 24860067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 141
Target Start/End: Complemental strand, 8576029 - 8575995
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacg 141  Q
    |||||||||||||||||||||||||||| ||||||    
T  8576029 aagggcaacctggtgcactaaagctcccacatacg 8575995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 141
Target Start/End: Complemental strand, 22371246 - 22371212
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacg 141  Q
    |||||||||| ||||||||||||||||||||||||    
T  22371246 aagggcaacccggtgcactaaagctcccgcatacg 22371212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 17705565 - 17705496
Alignment:
Q  171 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctt 240  Q
    ||||||||||| ||| ||||| ||||| |||||||||||||| |||| || || ||||||  ||||||||    
T  17705565 gtgtattgtacacagccttactctgttgtttacacaagaggcggtttccaggacttgaacccgtgacctt 17705496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 59113 - 58975
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||| | |||||||||||||||||||||| |  | ||| ||| ||||||||||||||   |||||||||||||||||||||||||||||||| |    
T  59113 aagggcaacccgatgcactaaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttata 59014  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||||| || || ||||||  |||||||||||    
T  59013 caagaggctgtttccaggacttgaacccgtgacctttca 58975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 29355856 - 29355994
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||  | ||||||||||||||| |||||||||||| |||||    
T  29355856 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttaca 29355955  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||||| || || ||||||  |||||||||||    
T  29355956 caagaggctgtttccaggacttgaacccgtgacctttca 29355994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 12221915 - 12222054
Alignment:
Q  107 aagggcaacctggtgcactaaa-gctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttac 203  Q
    |||||||||| ||||||||||| ||||||||||||| | || | | ||| |||||||||||||  | ||||||||||||||| |||||||||||||||||    
T  12221915 aagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttac 12222014  T
Q  204 acaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||||||||| || || ||||||  |||||||||||    
T  12222015 acaagaggctgtttccaagacttgaacccgtgacctttca 12222054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 1354758 - 1354892
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  1354758 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 1354855  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||| || || ||||||  |||||||||||    
T  1354856 agaggctgtttccaggacttgaaccagtgacctttca 1354892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 9161258 - 9161121
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccat--ttagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    ||||||||||||||||||||||||| ||||||||| | || | | ||| ||||||||||||  ||  |||||||||||||| ||||| ||| ||||||||    
T  9161258 aagggcaacctggtgcactaaagcttccgcatacgcagggtccgagaaggggtcccaccattattgatgtattgtacgcagccttactctg-tttttaca 9161160  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||||| || || |||||| ||||||||||||    
T  9161159 caagaggctgtttccaggacttgaacctgtgacctttca 9161121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 1347096 - 1346962
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  1347096 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 1346999  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    || |||||||| || || ||||||  |||||||||||    
T  1346998 agtggctgtttccaggacttgaacccgtgacctttca 1346962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 32728158 - 32728293
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    ||||||||| ||||||||||||| ||||||||||||| || ||| ||||||| || || |||| || |||||||| |||||||||||||||||||||| |    
T  32728158 aagggcaacatggtgcactaaagttcccgcatacgtagggtctgggaaagggacc-actatttggtatattgtacacagtcttaccctgttttttacata 32728256  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||| ||||| ||  | |||||  ||||||||||||    
T  32728257 agaggttgtttccaaaacttgaatctgtgacctttca 32728293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 3815084 - 3815214
Alignment:
Q  113 aacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggc 212  Q
    |||| |||||||||||||| ||||||||||| ||   | |||||||||||||||||| ||||||||||||||||| |||| | |||||||||||| || |    
T  3815084 aacccggtgcactaaagcttccgcatacgtagggttcgggaaagggtcccaccatttggtgtattgtacgcagtcgtaccatattttttacacaatagtc 3815183  T
Q  213 tgtttacacgatttgaacttgtgacctttca 243  Q
    ||||| || || ||||||  ||||| |||||    
T  3815184 tgtttccaggacttgaacccgtgacatttca 3815214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 107 - 241
Target Start/End: Original strand, 18277194 - 18277328
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||| ||||| |||||| |||||||||||||||||||  | ||  ||| |||||||||||||| ||||  ||||| ||  ||||||||| ||||||||||    
T  18277194 aaggacaacccggtgcagtaaagctcccgcatacgtagagtctaggaaggggtcccaccatttggtgttctgtactcaaccttaccctgatttttacaca 18277293  T
Q  207 agaggctgtttacacgatttgaacttgtgaccttt 241  Q
    ||||||||||| || |||||||||  |||||||||    
T  18277294 agaggctgtttccaagatttgaacccgtgaccttt 18277328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 20400755 - 20400665
Alignment:
Q  153 aaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||  ||||| ||  | |||||| ||||||||||||    
T  20400755 aaagggtcccgctatttagtgtactgtacgcagtcttaccctgttttttacacaagagattgtttccataacttgaacctgtgacctttca 20400665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 243
Target Start/End: Original strand, 7947384 - 7947509
Alignment:
Q  119 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    |||||||||||||||| |||||| |||| | | ||| ||| |||||||||| | |||||||||||||| ||||||||| |||||||||| |||| |||||    
T  7947384 gtgcactaaagctcccacatacgcaaggtccgggaagggggcccaccattttggtgtattgtacgcagccttaccctggtttttacacaggaggttgttt 7947483  T
Q  218 acacgatttgaacttgtgacctttca 243  Q
     || || ||||||  |||||||||||    
T  7947484 ccaggagttgaaccggtgacctttca 7947509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 1941940 - 1941876
Alignment:
Q  156 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttaca 220  Q
    |||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  1941940 gggtcccaccattcggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttaca 1941876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 2166411 - 2166549
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||| |||||||||||||||||| |||  || || | | ||| |||||||||||||  | ||||||||||||||  |||| ||||| |||||||    
T  2166411 aagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttaca 2166510  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||| ||||| || || ||||||  |||||||||||    
T  2166511 caagaggttgtttccaggacttgaacccgtgacctttca 2166549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 2178044 - 2178182
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||| |||||||||||||||||| |||  || || | | ||| |||||||||||||  | ||||||||||||||  |||| ||||| |||||||    
T  2178044 aagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttaca 2178143  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||| ||||| || || ||||||  |||||||||||    
T  2178144 caagaggttgtttccaggacttgaacccgtgacctttca 2178182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 26097292 - 26097184
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||  ||||| ||||||||||||||| |||||||||  |||||||||    
T  26097292 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccttcatttggtgtattgtacgcagccttaccctg--ttttacaca 26097195  T
Q  207 agaggctgttt 217  Q
    |||||||||||    
T  26097194 agaggctgttt 26097184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 25557857 - 25557749
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||| ||  ||||| ||||||||||||||| |||||||||  |||||||||    
T  25557857 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccttcatttggtgtattgtacgcagccttaccctg--ttttacaca 25557760  T
Q  207 agaggctgttt 217  Q
    |||||||||||    
T  25557759 agaggctgttt 25557749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 6024303 - 6024257
Alignment:
Q  171 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  6024303 gtgtattgtacgcagtcttaccatgttttttacacaagaggctgttt 6024257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 243
Target Start/End: Original strand, 23240837 - 23240959
Alignment:
Q  119 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttta 218  Q
    ||||||||||||||||||||||| |  | |   ||| ||||||||||| || || |||||||||||  |||||||||||||  ||||||||||||||||     
T  23240837 gtgcactaaagctcccgcatacgcattgtcctagaaggggtcccaccaattggtatattgtacgcaaacttaccctgtttt--acacaagaggctgtttc 23240934  T
Q  219 cacgatttgaacttgtgacctttca 243  Q
    || || ||| || ||||||||||||    
T  23240935 caggacttgcacctgtgacctttca 23240959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 230
Target Start/End: Complemental strand, 33138921 - 33138844
Alignment:
Q  153 aaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaac 230  Q
    ||||||||||||||||| ||||||||||||| | ||||| |||||||||| |||||||| ||||| || || ||||||    
T  33138921 aaagggtcccaccatttggtgtattgtacgcggccttactctgttttttatacaagaggttgtttccaggacttgaac 33138844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 12889496 - 12889424
Alignment:
Q  171 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||||| |||| ||| |||||||||| |||||||||||||||| || || |||||| ||||||||||||    
T  12889496 gtgtattgtatgcagccttgccctgtttttaacacaagaggctgttttcaagacttgaacctgtgacctttca 12889424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 24097711 - 24097579
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||||||  |||||||||| ||||||||| | || | | ||| |||||||||||||| ||    |||| |||| |||||||||||||||| |||    
T  24097711 aagggcaacctgggacactaaagcttccgcatacgcagggtccgggaaggggtcccaccatttggt----tgtaagcagccttaccctgttttttataca 24097616  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||| ||  | || || |||| |||||||||||    
T  24097615 agaggctggttcgaggacttaaactcgtgacctttca 24097579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 8409311 - 8409241
Alignment:
Q  173 gtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||||| |||||||||||||||||||||||||| |||| || || |||||   |||||||||||    
T  8409311 gtattgtacgcagccttaccctgttttttacacaagaggcagtttccaggacttgaatccgtgacctttca 8409241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 185
Target Start/End: Complemental strand, 12886047 - 12885967
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca--tttagtgtattgtacgcag 185  Q
    |||||||||| ||||||||||||||||| |||||| | || ||| ||| |||||||||||  ||| |||||||||||||||    
T  12886047 aagggcaacccggtgcactaaagctcccacatacgcagggtctgggaaggggtcccaccattttttgtgtattgtacgcag 12885967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 24751135 - 24751176
Alignment:
Q  167 tttagtgtattgtacgcagtcttaccctgttttttacacaag 208  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  24751135 tttagtgtattgtacgcagtcttaccctattttttacacaag 24751176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 230
Target Start/End: Complemental strand, 32579553 - 32579437
Alignment:
Q  113 aacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggc 212  Q
    ||||||| | ||||||||||||||||| | | || ||| ||| |||||||||||||| | ||||||||||||| |||||| |  |||||| || ||||||    
T  32579553 aacctggagtactaaagctcccgcatatgcagggtctgggaaggggtcccaccatttggggtattgtacgcaggcttaccgt-atttttataccagaggc 32579455  T
Q  213 tgtttacacgatttgaac 230  Q
    ||||| || || ||||||    
T  32579454 tgtttccaggacttgaac 32579437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 383761 - 383837
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgc 183  Q
    |||||||||| |||| ||| ||||||||||||||| | || ||| ||| ||||||||| |||| |||||||||||||    
T  383761 aagggcaacccggtggactgaagctcccgcatacgcagggtctgagaaggggtcccacaatttggtgtattgtacgc 383837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 241
Target Start/End: Complemental strand, 14553626 - 14553511
Alignment:
Q  128 agctcccgcatacgtaagggctgcgaaagggtcccacca--tttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatt 225  Q
    |||||||||||||  | || || |||| |||||||||||  ||| ||||||| ||| ||| |||||||| |||||||||||||| ||| ||| || || |    
T  14553626 agctcccgcatacacagggtctacgaaggggtcccaccagttttggtgtattatacacagccttaccctattttttacacaagaagctatttccaggact 14553527  T
Q  226 tgaacttgtgaccttt 241  Q
    ||||| ||||||||||    
T  14553526 tgaacctgtgaccttt 14553511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 13905026 - 13905116
Alignment:
Q  152 gaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||||| ||||||| ||| |||||| |||| |||||||||||||||||||||||||  |||| || || |||| |  |||||||||||    
T  13905026 gaaagggtcc-accatttggtgaattgtatgcagccttaccctgttttttacacaagaggtcgttttcaggacttgagcccgtgacctttca 13905116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 17432482 - 17432338
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattt--agtgtattgtacgcagtcttaccct------gttt 198  Q
    |||||||||| ||||||||||||||||||||| |  | |  | | |||| |||| ||||||||  |||||||||||| ||| ||||||||      ||||    
T  17432482 aagggcaacccggtgcactaaagctcccgcatgcacaggatccgggaaaaggtctcaccatttttagtgtattgtacacagccttacccttaccctgttt 17432383  T
Q  199 tttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||| | ||||| || || |||||| ||||||||||||    
T  17432382 tttacacaagatgttgtttccaggacttgaacctgtgacctttca 17432338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 28007711 - 28007628
Alignment:
Q  156 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgaccttt 241  Q
    |||||||| ||||| ||||||||||||||| || ||||||  |||||||||||||||| ||| || || ||||||  |||||||||    
T  28007711 gggtcccagcatttggtgtattgtacgcagcctgaccctg--ttttacacaagaggctctttccaggacttgaacccgtgaccttt 28007628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 243
Target Start/End: Original strand, 15866052 - 15866174
Alignment:
Q  119 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttta 218  Q
    |||||||| || ||||||| ||| | || | | ||| |||||||||||||| |||||||  ||||||  ||||||||||||||||  ||||||||||||     
T  15866052 gtgcactatagatcccgcaaacgcagggtccgggaaggggtcccaccatttggtgtatt--acgcagctttaccctgttttttacttaagaggctgtttc 15866149  T
Q  219 cacgatttgaacttgtgacctttca 243  Q
    || || ||||||   ||||||||||    
T  15866150 caggaattgaacccatgacctttca 15866174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 23930128 - 23930205
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgca 184  Q
    |||||||||  |||||||||||||||||||||| | | || | | ||| |||||||||||| | ||||||||||||||    
T  23930128 aagggcaactcggtgcactaaagctcccgcataagcagggtccgtgaaggggtcccaccatctggtgtattgtacgca 23930205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 187
Target Start/End: Original strand, 3116121 - 3116212
Alignment:
Q  98 aaaaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca--tttagtgtattgtacgcagtc 187  Q
    ||||| || |||||||| | |||| ||||||||||||||||||| |||| | | ||| |||||||||||  ||| ||||||||| |||||||    
T  3116121 aaaaaaaaaaagggcaatccggtgtactaaagctcccgcatacgcaaggtccgagaaggggtcccaccatttttggtgtattgtgcgcagtc 3116212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 217
Target Start/End: Original strand, 9671161 - 9671196
Alignment:
Q  182 gcagtcttaccctgttttttacacaagaggctgttt 217  Q
    |||| |||||||||||||||||||||||||||||||    
T  9671161 gcagccttaccctgttttttacacaagaggctgttt 9671196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 178
Target Start/End: Complemental strand, 13267859 - 13267788
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattg 178  Q
    |||||||||| |||||||| ||||||||||||||| | || |   ||| |||||||||||||| ||||||||    
T  13267859 aagggcaacccggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattg 13267788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 6808538 - 6808496
Alignment:
Q  98 aaaaacaataagggcaacctggtgcactaaagctcccgcatac 140  Q
    ||||| || |||||||||| |||||||||||||||||||||||    
T  6808538 aaaaagaaaaagggcaacccggtgcactaaagctcccgcatac 6808496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 139
Target Start/End: Complemental strand, 12892143 - 12892111
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcata 139  Q
    |||||||||| ||||||||||||||||||||||    
T  12892143 aagggcaacccggtgcactaaagctcccgcata 12892111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 13628316 - 13628368
Alignment:
Q  166 atttagtgtattgtacgcagtcttaccctg-ttttttacacaagaggctgttt 217  Q
    ||||||||||||||||||| | ||||| || ||||||| ||||||||||||||    
T  13628316 atttagtgtattgtacgcaattttaccttgtttttttaaacaagaggctgttt 13628368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 97 - 240
Target Start/End: Complemental strand, 24449034 - 24448891
Alignment:
Q  97 taaaaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgt 196  Q
    |||||| || |||||||||| |||||||||||||||| ||||||| | || | | ||| |||||||||||||| ||||||||||||||| |||||||| |    
T  24449034 taaaaaaaaaaagggcaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctat 24448935  T
Q  197 tttttacacaagaggctgtttacacgatttgaacttgtgacctt 240  Q
    ||||||||||| ||||||||| || || ||||||  ||||||||    
T  24448934 tttttacacaaaaggctgtttccaggacttgaacccgtgacctt 24448891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 38879717 - 38879579
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||  | ||||||||||||||| |||||||||||||||| |    
T  38879717 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttata 38879618  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||||| || || ||||||  |||||||||||    
T  38879617 caagaggctgtttccaggacttgaacccgtgacctttca 38879579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 107 - 216
Target Start/End: Original strand, 16880648 - 16880757
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    ||||| |||| |||||||||||||||||||||||| | || | | |||  |||| |||||||| ||||||||||||||| ||||||||||||||||||||    
T  16880648 aagggaaacccggtgcactaaagctcccgcatacgcatggtccgggaagtggtcacaccatttggtgtattgtacgcagccttaccctgttttttacaca 16880747  T
Q  207 agaggctgtt 216  Q
    ||||||||||    
T  16880748 agaggctgtt 16880757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 32703556 - 32703422
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  32703556 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 32703459  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||| || || ||||||  |||||||||||    
T  32703458 agaggctgtttccaggacttgaacccgtgacctttca 32703422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 28516434 - 28516571
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacac 205  Q
    |||||||||||||| |||||||||||| |||| || | || ||| ||| |||||||||||||| | |||||||||||||| | || ||||||||||||||    
T  28516434 aagggcaacctggtccactaaagctcctgcatgcgcagggtctgggaatgggtcccaccattttgatgtattgtacgcagccctagcctgttttttacac 28516533  T
Q  206 aagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||| ||||| || || ||||||  |||||||||||    
T  28516534 aagaggatgtttccaagacttgaacccgtgacctttca 28516571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 240
Target Start/End: Complemental strand, 41014452 - 41014320
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| |||||||||||||||||||||| |   || |   ||| |||||||||||||| ||||||||||||||| |||||||||| |||||||||    
T  41014452 aagggcaacccggtgcactaaagctcccgcatatgcggggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacaca 41014354  T
Q  207 agaggctgtttacacgatttgaacttgtgacctt 240  Q
    ||||||||||| || || ||||||  ||||||||    
T  41014353 agaggctgtttccaggacttgaacccgtgacctt 41014320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 120 - 243
Target Start/End: Complemental strand, 27328875 - 27328750
Alignment:
Q  120 tgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    |||| ||||||||||||||||| | ||   | ||| |||||||||||||  | ||||||||||||||| |||||||||||||||||||||||| ||||||    
T  27328875 tgcattaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagagactgttt 27328776  T
Q  218 acacgatttgaacttgtgacctttca 243  Q
     || || |||||| ||||||||||||    
T  27328775 ccaggacttgaacctgtgacctttca 27328750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 240
Target Start/End: Original strand, 4619105 - 4619240
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||| ||||||||||||||| |||||| |   || | | ||| |||||||||||||  | ||||||||||||||| ||||||||||||||||||    
T  4619105 aagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttaca 4619204  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctt 240  Q
    ||||||||| ||| || || ||||||  ||||||||    
T  4619205 caagaggctatttccaggacttgaacccgtgacctt 4619240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 242
Target Start/End: Original strand, 8169985 - 8170118
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| |||||||| || |||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  8169985 aagggcaacccggtgcactgaaactcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 8170082  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttc 242  Q
    | ||||||||| || || ||||||  ||||||||||    
T  8170083 aaaggctgtttccaggacttgaacccgtgacctttc 8170118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 43334338 - 43334200
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca--tttagtgtattgtacgcagtcttaccctg-ttttttac 203  Q
    |||||||||| ||||||||||||||||||||| || | || | | ||| |||||||||||  ||| ||||||||||||||| ||||||||| ||||||||    
T  43334338 aagggcaacccggtgcactaaagctcccgcat-cgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttttac 43334240  T
Q  204 acaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||| |||||||||| || || ||||||  |||||||||||    
T  43334239 acaggaggctgtttccaggacttgaacccgtgacctttca 43334200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 107 - 217
Target Start/End: Original strand, 7097761 - 7097870
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    ||||||| | ||||||||||||||||||||||||| | ||   | ||| ||||| |||||||| ||||||||||||||  ||||||||| ||||||||||    
T  7097761 aagggcagcatggtgcactaaagctcccgcatacgcagggttcgggaaggggtctcaccatttggtgtattgtacgcaaccttaccctg-tttttacaca 7097859  T
Q  207 agaggctgttt 217  Q
    |||||||||||    
T  7097860 agaggctgttt 7097870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 107 - 214
Target Start/End: Original strand, 13801768 - 13801877
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||| ||||||||||||||| |||||| |   || | | ||| |||||||||||||  | ||||||||||||||| ||||||||||||||||||    
T  13801768 aagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttaca 13801867  T
Q  205 caagaggctg 214  Q
    ||||||||||    
T  13801868 caagaggctg 13801877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 35710445 - 35710311
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||| |||||||||||| | | |  | | ||| |||||||||||||| |||||||| |||||| |||||||  | |||||||||    
T  35710445 aagggcaacccggtgcactagagctcccgcatatgcatgttccgggaaggggtcccaccatttggtgtattgaacgcagccttaccc--tattttacaca 35710348  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||| || || ||||||  |||||||||||    
T  35710347 agaggctgtttccaggacttgaacccgtgacctttca 35710311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 235
Target Start/End: Original strand, 19142956 - 19143071
Alignment:
Q  119 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttta 218  Q
    |||||||||| |||||||||||| | || | | ||| |||||||||||||| ||||| ||||||||| ||||||||| ||||||||||||||| |||||     
T  19142956 gtgcactaaatctcccgcatacgcatggtccgggaaggggtcccaccatttggtgtactgtacgcagccttaccctg-tttttacacaagaggttgtttc 19143054  T
Q  219 cacgatttgaacttgtg 235  Q
    || || |||||| ||||    
T  19143055 caggacttgaacctgtg 19143071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 118 - 210
Target Start/End: Complemental strand, 43574729 - 43574637
Alignment:
Q  118 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagag 210  Q
    ||||| |||||||||||||||||| | || | | ||| |||||||||||||| || |||||||||||| ||||||||||||| ||||||||||    
T  43574729 ggtgctctaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtatattgtacgcagccttaccctgttttctacacaagag 43574637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 29334530 - 29334419
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt-tagtgtattgtacgcagtcttaccctgttttttacac 205  Q
    ||||||| || |||||| ||||| |||| |||||| | || | | ||| ||||||||||||| | ||||||||||||||| |||||| ||||||||||||    
T  29334530 aagggcagcccggtgcattaaagatcccacatacgcagggtccgggaatgggtcccaccattctggtgtattgtacgcagccttaccttgttttttacac 29334431  T
Q  206 aagaggctgttt 217  Q
    ||||||||||||    
T  29334430 aagaggctgttt 29334419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 30006456 - 30006349
Alignment:
Q  110 ggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaaga 209  Q
    ||||||| ||||||||||||||||||||||| || |  | | ||| |||||||||||||||||||| ||||| ||| ||||||||||| |||| | ||||    
T  30006456 ggcaacccggtgcactaaagctcccgcatacataggccccgggaaggggtcccaccatttagtgtaatgtacacagccttaccctgttgtttatataaga 30006357  T
Q  210 ggctgttt 217  Q
    || |||||    
T  30006356 ggttgttt 30006349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 217
Target Start/End: Complemental strand, 7368528 - 7368422
Alignment:
Q  109 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaag 208  Q
    |||||||| ||||||||| ||||||| |||| | | || | | ||| ||||||||||| || ||||||||||||||| |||||||||  |||||||||||    
T  7368528 gggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagccttaccctg--ttttacacaag 7368431  T
Q  209 aggctgttt 217  Q
    |||||||||    
T  7368430 aggctgttt 7368422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 20135740 - 20135628
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||| |||||||| ||||||| ||||| |   || | | ||| |||||||||||||  | ||||||||||||||| |||||| |||||||||||    
T  20135740 aagggcaacccggtgcactgaagctcctgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttaca 20135641  T
Q  205 caagaggctgttt 217  Q
    |||||||||||||    
T  20135640 caagaggctgttt 20135628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 22187421 - 22187283
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||||| |||||||||||||| ||||| ||| ||  || ||| ||||| ||   |||   |||||||||||||||||||| | |||||||||||    
T  22187421 aagggcaacctgatgcactaaagctcctgcatatgtagggtttgggaaggggtctcattgtttttggtgtattgtacgcagtcttatcatgttttttaca 22187322  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||||| || || || |||  |||||||||||    
T  22187321 caagaggctgtttccaggacttaaaccggtgacctttca 22187283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 12006328 - 12006441
Alignment:
Q  106 taagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccat--ttagtgtattgtacgcagtcttaccctgttttttac 203  Q
    ||||||||||  |||||||||||||||||||||| | | || ||| ||| ||||||||||||  || |||||||||| | || |||||||| ||||||||    
T  12006328 taagggcaacacggtgcactaaagctcccgcataggcagggtctgggaaggggtcccaccattattggtgtattgtatggagccttaccctattttttac 12006427  T
Q  204 acaagaggctgttt 217  Q
    | |||||| |||||    
T  12006428 ataagaggttgttt 12006441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 16957448 - 16957374
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtac 181  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||| |||||||||||    
T  16957448 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtac 16957374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 2838890 - 2838803
Alignment:
Q  129 gctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    ||||||||||||| | || | | ||| || ||||||||||| ||||||||||||||| |||||||||| |||||||||||| |||||||    
T  2838890 gctcccgcatacgcagggtccgagaagggatcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagatgctgttt 2838803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 195
Target Start/End: Original strand, 34154815 - 34154903
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctg 195  Q
    |||||||||| ||||||||| |||| ||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||    
T  34154815 aagggcaacccggtgcactagagctaccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg 34154903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 42924899 - 42924971
Alignment:
Q  171 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||||||  ||||||||||||||||||||||| | ||||| || || ||||||| |||||||||||    
T  42924899 gtgtattgtacgcaaccttaccctgttttttacacaagatgttgttttcaggacttgaactcgtgacctttca 42924971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 243
Target Start/End: Original strand, 34074620 - 34074699
Alignment:
Q  164 ccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||| |||||||| |||||  |||||  ||||||||||||||||||||||||  | || |||||||||||||||||||    
T  34074620 ccatttggtgtattgaacgcaaccttactgtgttttttacacaagaggctgtttctaggacttgaacttgtgacctttca 34074699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 1405276 - 1405188
Alignment:
Q  152 gaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctt 240  Q
    |||||||||||||||||| ||||||||||||||  ||||| || ||||||| | |||||| ||||| || || ||||||  ||||||||    
T  1405276 gaaagggtcccaccatttggtgtattgtacgcaaacttactctattttttatataagaggttgtttccaggacttgaacccgtgacctt 1405188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 39801647 - 39801591
Alignment:
Q  110 ggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca 166  Q
    ||||||| |||||||||||||||||||||||||| || ||| ||| |||||||||||    
T  39801647 ggcaacccggtgcactaaagctcccgcatacgtagggtctgggaaggggtcccacca 39801591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 36770864 - 36770806
Alignment:
Q  157 ggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtt 216  Q
    |||||||||||||||||||||||| || | |||||| ||||||||||| |||||||||||    
T  36770864 ggtcccaccatttagtgtattgtatgc-ggcttaccttgttttttacataagaggctgtt 36770806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 41426033 - 41425982
Alignment:
Q  156 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaa 207  Q
    ||||||||||| || |||||||||| |||| |||||||||||||||||||||    
T  41426033 gggtcccaccaattggtgtattgtatgcagccttaccctgttttttacacaa 41425982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 208977 - 209062
Alignment:
Q  156 gggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgaccttt 241  Q
    |||||||||||||| | ||||||| | |||| ||||||||||||| ||||||||||| ||||  || || |||||||||||||||||    
T  208977 gggtcccaccattttggtgtattgaatgcagccttaccctgtttt-tacacaagaggttgttgccaggacttgaacttgtgaccttt 209062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 22600569 - 22600488
Alignment:
Q  126 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaa 207  Q
    |||||||||||||||| | |  | | ||| || ||||||||||| ||||||||||| ||| |||||||||| ||||||||||    
T  22600569 aaagctcccgcatacgcaggatccgggaagggatcccaccatttggtgtattgtacacagccttaccctgtgttttacacaa 22600488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 22907915 - 22907975
Alignment:
Q  156 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    |||||||||||||| |||||||||| |||  ||||| ||| |||||||||||||||||||||    
T  22907915 gggtcccaccatttggtgtattgtatgcaaccttactctg-tttttacacaagaggctgttt 22907975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 141
Target Start/End: Original strand, 29184055 - 29184096
Alignment:
Q  100 aaacaataagggcaacctggtgcactaaagctcccgcatacg 141  Q
    |||| |||||||||||| ||||||||||||||||||||||||    
T  29184055 aaactataagggcaacccggtgcactaaagctcccgcatacg 29184096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 22025597 - 22025541
Alignment:
Q  187 cttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||||||||||||||||||||||| || || ||||||   ||||||||||    
T  22025597 cttaccctgttttttacacaagaggctgtttccaggacttgaacccatgacctttca 22025541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 243
Target Start/End: Original strand, 37024626 - 37024691
Alignment:
Q  176 ttgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||||| |||||||||||||  |||||||||||||||| || || ||||||  |||||||||||    
T  37024626 ttgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttca 37024691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 24323725 - 24323816
Alignment:
Q  126 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    ||||||||||||||   | || ||| ||| ||||||||| |||| | ||||| ||||||  |||||||||| |||||||||||||| |||||    
T  24323725 aaagctcccgcatatacagggtctgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgttt 24323816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 24360349 - 24360440
Alignment:
Q  126 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    ||||||||||||||   | || ||| ||| ||||||||| |||| | ||||| ||||||  |||||||||| |||||||||||||| |||||    
T  24360349 aaagctcccgcatatacagggtctgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgttt 24360440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 139
Target Start/End: Complemental strand, 19438802 - 19438768
Alignment:
Q  105 ataagggcaacctggtgcactaaagctcccgcata 139  Q
    |||||||||||||||||||||| ||||||||||||    
T  19438802 ataagggcaacctggtgcactagagctcccgcata 19438768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 31694109 - 31694207
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacac 205  Q
    |||||||  ||||||||||||| |||||||||||| |||| ||| ||| | |||||| || |  |||||||||| ||||  ||| ||| ||||||||||    
T  31694109 aagggcagtctggtgcactaaatctcccgcatacgcaaggtctgggaaggagtcccatcaataggtgtattgtatgcagctttagcctattttttacac 31694207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 199
Target Start/End: Original strand, 9794390 - 9794471
Alignment:
Q  118 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttt 199  Q
    |||||||||||||| | ||||| |   || ||| ||| || |||||| |||| |||||||||| ||||||||||||||||||    
T  9794390 ggtgcactaaagcttctgcatatgctgggtctgtgaagggatcccactatttggtgtattgtatgcagtcttaccctgtttt 9794471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 24903746 - 24903807
Alignment:
Q  156 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    ||||| ||||| || ||| ||||||| || ||||||||| |||||||||||| |||||||||    
T  24903746 gggtctcaccaattggtggattgtacacaatcttaccctattttttacacaaaaggctgttt 24903807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 107 - 168
Target Start/End: Complemental strand, 25622594 - 25622533
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt 168  Q
    |||||||| | |||||||||||||||||||||||| | || | | ||| |||||||||||||    
T  25622594 aagggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 25622533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 107 - 140
Target Start/End: Complemental strand, 32354261 - 32354228
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatac 140  Q
    |||||||||| |||||||||||||||||||||||    
T  32354261 aagggcaacccggtgcactaaagctcccgcatac 32354228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 107 - 217
Target Start/End: Original strand, 20639659 - 20639770
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacac 205  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||| | |||||||||||||| |||||||||||||||||||    
T  20639659 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttttacac 20639758  T
Q  206 aagaggctgttt 217  Q
    ||||||||||||    
T  20639759 aagaggctgttt 20639770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 105 - 243
Target Start/End: Original strand, 6430625 - 6430762
Alignment:
Q  105 ataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||||| ||||| |||||||||||||||||| | || | | |||  ||||||||||||| ||||||||||||||| ||||||||| ||||||||    
T  6430625 ataagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaagtggtcccaccatttggtgtattgtacgcagccttaccctg-tttttaca 6430723  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||||| || || ||||||  |||||||||||    
T  6430724 caagaggctgtttccatgacttgaacccgtgacctttca 6430762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 109 - 243
Target Start/End: Original strand, 17043398 - 17043531
Alignment:
Q  109 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaag 208  Q
    ||||| ||||||||| ||||||||| ||||| | | || ||| ||| |||||||||||||| ||||||||||||||| |||||||||| |||||||||||    
T  17043398 gggcagcctggtgca-taaagctccagcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtattttacacaag 17043496  T
Q  209 aggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||| || || |||||| ||||||||||||    
T  17043497 aggctgtttccaggacttgaacctgtgacctttca 17043531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 14983968 - 14983858
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    ||||||||| |||| |||||||||||||||||||| | || | | ||| ||||||||||||||||||||||||| |||  |||||||| |||||||||||    
T  14983968 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttagtgtattgtaggcaaccttaccctattttttacaca 14983869  T
Q  207 agaggctgttt 217  Q
    |||||||||||    
T  14983868 agaggctgttt 14983858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 25629183 - 25629073
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| |||||||||||||||||||||| ||| || | | ||| |||||||||||||| ||||||||||| ||| |||||||| |||||||||||    
T  25629183 aagggcaacccggtgcactaaagctcccgcatatgtagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctattttttacaca 25629084  T
Q  207 agaggctgttt 217  Q
    |||| ||||||    
T  25629083 agagactgttt 25629073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 107 - 240
Target Start/End: Complemental strand, 5648392 - 5648260
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    ||||||||||  ||||||| ||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||| |||||||||| |||||||||    
T  5648392 aagggcaacccagtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacaca 5648294  T
Q  207 agaggctgtttacacgatttgaacttgtgacctt 240  Q
    ||||||||||| || || ||||||  ||||||||    
T  5648293 agaggctgtttccaggacttgaacccgtgacctt 5648260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 107 - 240
Target Start/End: Original strand, 16408602 - 16408737
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||| |||||||||||||||||||||| |   || | | ||| |||| ||||||||  | ||||||||||||||||||||||||||||||||||    
T  16408602 aagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgttttttaca 16408701  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctt 240  Q
    ||||||||||||| || || ||||||  ||||||||    
T  16408702 caagaggctgtttccaggacttgaacccgtgacctt 16408737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 44363131 - 44363269
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| ||||||||||||||   |||  |||||||||| | ||||||||||||||||    
T  44363131 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgcgttgtacgcagccctaccctgttttttaca 44363230  T
Q  205 caagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    || |||||||||| || || ||||||| |||||||||||    
T  44363231 cacgaggctgttttcaggacttgaactcgtgacctttca 44363269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 107 - 242
Target Start/End: Complemental strand, 47444091 - 47443956
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    ||||||||||  ||||||| ||||||| ||||| | | || | | ||| |||||||||||||| ||||||||||||||| ||||||||||||||||| ||    
T  47444091 aagggcaacccagtgcactgaagctcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacgca 47443992  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttc 242  Q
    ||||||||||| || || ||||||  ||||||||||    
T  47443991 agaggctgtttccaggacttgaacccgtgacctttc 47443956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 109 - 240
Target Start/End: Complemental strand, 21647098 - 21646965
Alignment:
Q  109 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||| |||||||||||||||||||||| |   || ||| ||| |||||||||||||  | || |||||||||||| |||||||| |||||||||||    
T  21647098 gggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtatattgtacgcagccttaccctattttttacaca 21646999  T
Q  207 agaggctgtttacacgatttgaacttgtgacctt 240  Q
    ||||||||||| || || |||||| |||||||||    
T  21646998 agaggctgtttccaggacttgaacctgtgacctt 21646965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 118 - 220
Target Start/End: Original strand, 51865050 - 51865152
Alignment:
Q  118 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    |||||| ||||||||||||||||| | || | | ||| ||| |||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||    
T  51865050 ggtgcaataaagctcccgcatacgcagggtccgggaaggggccccaccatttggtgtattgtacgcagccttaccatgttttttacacaagaggctgttt 51865149  T
Q  218 aca 220  Q
    |||    
T  51865150 aca 51865152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 47528531 - 47528665
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||| ||||||| ||||   | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  47528531 aagggcaacccggtgcactagagctcccacatattcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 47528628  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||| || || |||||| ||||||||||||    
T  47528629 agaggctgtttccaggacttgaacctgtgacctttca 47528665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 48598826 - 48598960
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||| |||||| ||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  48598826 aagggcaacccggtgcactagagctccggcatatgcatggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 48598923  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||| || || ||||||  |||||||||||    
T  48598924 agaggctgtttccaggacttgaacccgtgacctttca 48598960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 30639513 - 30639378
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    ||||||||||  ||||||||||||||||||||| | | || | | ||| ||||| |||||||| ||||||||||||||| |||||||||| |||||||||    
T  30639513 aagggcaacccagtgcactaaagctcccgcatatgcagggtccgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgt-ttttacaca 30639415  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||| |||||| || || ||||||  |||||||||||    
T  30639414 agagtctgtttccaggacttgaaccagtgacctttca 30639378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 104 - 240
Target Start/End: Complemental strand, 40915965 - 40915830
Alignment:
Q  104 aataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttac 203  Q
    ||||||||||| | |||||||| ||||||||||||||| | || | | ||| || ||||||||||| ||||||||||||||| |||||| || |||||||    
T  40915965 aataagggcaatccggtgcactgaagctcccgcatacgcagggtccgggaagggctcccaccatttggtgtattgtacgcagccttaccttg-tttttac 40915867  T
Q  204 acaagaggctgtttacacgatttgaacttgtgacctt 240  Q
    |||||||||||||| || || ||||||  ||||||||    
T  40915866 acaagaggctgtttccaggacttgaacccgtgacctt 40915830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 107 - 215
Target Start/End: Complemental strand, 23501923 - 23501813
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||| |||||||||||||||||||||| | | || | | ||| |||||||||||||  | ||||||||||||||  ||||||||||||||||||    
T  23501923 aagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccctgttttttaca 23501824  T
Q  205 caagaggctgt 215  Q
    |||||||||||    
T  23501823 caagaggctgt 23501813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 9832314 - 9832448
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||| || ||| ||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  9832314 aagggcaacccggtgcactagagttcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 9832411  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||| || || ||||||  |||||||||||    
T  9832412 agaggctgttttcaggacttgaacccgtgacctttca 9832448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 11054149 - 11054283
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||| || |||||| |||||||||||||||||||||||||  |||||||||    
T  11054149 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccgccatttggtgtattgtacgcagtcttaccctg--ttttacaca 11054246  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||| |||||| || || ||||||  |||||||||||    
T  11054247 agagactgttttcaggacttgaacccgtgacctttca 11054283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 243
Target Start/End: Complemental strand, 19027971 - 19027846
Alignment:
Q  118 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    ||||||||||||||||| |||||| |  | |||  || ||||||||||| || ||||||||||||||| ||||||||||||||||||||||| | |||||    
T  19027971 ggtgcactaaagctcccacatacgcagagtctggaaaggggtcccaccaattggtgtattgtacgcagccttaccctgttttttacacaagatgttgttt 19027872  T
Q  218 acacgatttgaacttgtgacctttca 243  Q
     || || ||||||  |||||||||||    
T  19027871 ccaggacttgaacccgtgacctttca 19027846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 20225116 - 20224982
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  20225116 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 20225019  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||| ||||| || || ||||||   ||||||||||    
T  20225018 agaggttgtttccaggacttgaacccatgacctttca 20224982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 243
Target Start/End: Original strand, 29207900 - 29208033
Alignment:
Q  108 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaa 207  Q
    ||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  ||||||||||    
T  29207900 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaa 29207997  T
Q  208 gaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||  ||| || || ||||||  |||||||||||    
T  29207998 gaggcaatttccaggacttgaacccgtgacctttca 29208033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 35567304 - 35567168
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    ||||||| || |||||||||||||||||||| ||| | ||   | ||| |||||||||||||| |||| |||||| ||| ||||||||||||||||||||    
T  35567304 aagggcagcccggtgcactaaagctcccgcagacgcagggttcgggaaggggtcccaccatttggtgtgttgtacacagccttaccctgttttttacaca 35567205  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    || |||||||| || || ||||||   ||||||||||    
T  35567204 agtggctgtttccaagacttgaacccatgacctttca 35567168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 107 - 202
Target Start/End: Original strand, 30690177 - 30690272
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttttta 202  Q
    ||||||| ||||||||||||||||||||||||||| | || | | ||| ||||||||||| || |||||||||| |||| ||||||||||||||||    
T  30690177 aagggcagcctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccaattggtgtattgtatgcagccttaccctgtttttta 30690272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 243
Target Start/End: Complemental strand, 37494972 - 37494849
Alignment:
Q  120 tgcactaaagctcccgcatacgtaagggctgcgaaa-gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttta 218  Q
    |||||||||||||| |||||||  ||||   ||||| |||||||||||||| || ||||||| |||  ||||||||||||||||||||||||| |||||     
T  37494972 tgcactaaagctcctgcatacg-cagggtcccgaaaggggtcccaccatttggtatattgtatgcaaccttaccctgttttttacacaagaggttgtttc 37494874  T
Q  219 cacgatttgaacttgtgacctttca 243  Q
    || || |||||| ||||||||||||    
T  37494873 caggacttgaacctgtgacctttca 37494849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 5306661 - 5306800
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccg----catacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttttta 202  Q
    |||||||||| |||||| |||||||||||    |||||| | || | | ||| |||||||||||||| ||||||||||||||  |||||||||  |||||    
T  5306661 aagggcaacccggtgcattaaagctcccgtccacatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg-atttta 5306759  T
Q  203 cacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||||||| || || ||||||  |||||||||||    
T  5306760 cacaagaggctgtttccaggacttgaacccgtgacctttca 5306800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 209
Target Start/End: Original strand, 12711450 - 12711553
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccct-gttttttacac 205  Q
    |||||||||  |||||||||||| | |||||||||  ||| ||| ||| ||||||| |||||| ||||||||||||||||||||||||  ||||||||||    
T  12711450 aagggcaactgggtgcactaaagtttccgcatacgctaggtctgagaaggggtcccgccatttggtgtattgtacgcagtcttaccctatttttttacac 12711549  T
Q  206 aaga 209  Q
    ||||    
T  12711550 aaga 12711553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 20405223 - 20405110
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgtt-ttttac 203  Q
    ||||||||||   |||||||||||||||||||| |   || | | ||| |||||||||||||  |||||||||||||||| |||||||||||| ||||||    
T  20405223 aagggcaacccaatgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattagtgtattgtacgcaatcttaccctgtttttttac 20405124  T
Q  204 acaagaggctgttt 217  Q
    ||||||||||||||    
T  20405123 acaagaggctgttt 20405110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 16911698 - 16911586
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||| |||  |||||||||||||| |||| | || | | ||| |||||||||||||  | ||||||||||||||| ||||||||| ||| ||||    
T  16911698 aagggcaacccggtaaactaaagctcccgcgtacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgatttgtaca 16911599  T
Q  205 caagaggctgttt 217  Q
    |||||||||||||    
T  16911598 caagaggctgttt 16911586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 7909280 - 7909391
Alignment:
Q  106 taagggcaacctggtgcactaaagctccc-gcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    ||||||||||| | ||||||||||||||| ||||||| | ||   | ||| |||||||||||||| ||||||||||||||  ||||||||| ||||||||    
T  7909280 taagggcaacccgatgcactaaagctccccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg-tttttaca 7909378  T
Q  205 caagaggctgttt 217  Q
    |||||| ||||||    
T  7909379 caagagactgttt 7909391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 230
Target Start/End: Original strand, 8473620 - 8473744
Alignment:
Q  106 taagggcaacctggtgcactaaagctcccgcatacgtaaggg--ctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttac 203  Q
    ||||||||||| |||||||||||||||||||||| | | |||  | | ||| |||||||||||||| |||||||||| |||| |||||||||  ||  ||    
T  8473620 taagggcaacccggtgcactaaagctcccgcatatgcaggggtccggggaaggggtcccaccatttggtgtattgtatgcagccttaccctg--ttaaac 8473717  T
Q  204 acaagaggctgtttacacgatttgaac 230  Q
    |||||||||||||| || || ||||||    
T  8473718 acaagaggctgtttccaggacttgaac 8473744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 21489223 - 21489111
Alignment:
Q  106 taagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||| ||||||  |||||| |||||||||||||||| | ||   | ||| |||||||||||||| | || ||||||||||||||||| |||||||||||     
T  21489223 taagagcaacccagtgcacgaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgcattgtacgcagtcttactctgttttttacg 21489124  T
Q  205 caagaggctgttt 217  Q
    |||||||||||||    
T  21489123 caagaggctgttt 21489111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 243
Target Start/End: Complemental strand, 25463247 - 25463120
Alignment:
Q  115 cctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctg 214  Q
    |||||||||| |||||||||||||| | | || | | ||| |||||||||||||| |||| |||||||||  ||| ||| ||||||||||||||||| ||    
T  25463247 cctggtgcac-aaagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtgttgtacgcaacctttcccagttttttacacaagaggttg 25463149  T
Q  215 tttacacgatttgaacttgtgacctttca 243  Q
    ||| || || ||||||  |||||||||||    
T  25463148 tttccaggacttgaacccgtgacctttca 25463120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 54175199 - 54175088
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaaggg-tcccaccatttag-tgtattgtacgcagtcttaccctgttttttaca 204  Q
    ||||||| || |||||||||||||||||||||| | | || | | | ||||| ||||||||||| | |||||||||||||| |||||||||| |||||||    
T  54175199 aagggcagcccggtgcactaaagctcccgcatatgcagggtccggggaaggggtcccaccattttggtgtattgtacgcagccttaccctgt-ttttaca 54175101  T
Q  205 caagaggctgttt 217  Q
    |||||||||||||    
T  54175100 caagaggctgttt 54175088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 217
Target Start/End: Original strand, 9987846 - 9987945
Alignment:
Q  118 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    |||||| ||||||||||||||| | |||| |   ||| |||||||||||||| |||||||||| |||| |||||||| || ||||||||||||| |||||    
T  9987846 ggtgcattaaagctcccgcatatgcaaggtcaaggaaggggtcccaccatttggtgtattgtatgcagccttaccctattgtttacacaagaggttgttt 9987945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 55766467 - 55766558
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttt 198  Q
    ||||||| || ||||||||||||||| |||||||| |||| | | ||  |||| |||||||| |||||||||||||||| ||||||||||||    
T  55766467 aagggcatcccggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattcagtgtattgtacgcagccttaccctgttt 55766558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 55830722 - 55830813
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttt 198  Q
    ||||||| |||||||||||||||||| |||||||| |||| | | ||  |||| |||||||| ||||||||||||||||  |||||||||||    
T  55830722 aagggcatcctggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattcagtgtattgtacgcagcattaccctgttt 55830813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 213
Target Start/End: Original strand, 13256400 - 13256508
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 204  Q
    |||||||||| |||||||||||||||||||| | |   ||   | ||| ||||||||| |||  | ||||||||||||||| ||||||||||||||||||    
T  13256400 aagggcaacccggtgcactaaagctcccgcagatgcggggttcgggaaggggtcccactattattggtgtattgtacgcagccttaccctgttttttaca 13256499  T
Q  205 caagaggct 213  Q
    |||||||||    
T  13256500 caagaggct 13256508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 17079697 - 17079754
Alignment:
Q  152 gaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaaga 209  Q
    |||||||||||||||||||| |||||||| |||| ||||||||||||| |||||||||    
T  17079697 gaaagggtcccaccatttagcgtattgtatgcagccttaccctgttttatacacaaga 17079754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 39029111 - 39029172
Alignment:
Q  157 ggtcccaccattta-gtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    |||||||||||||  ||||||||||| ||| |||||||||||||||||||||||||||||||    
T  39029111 ggtcccaccattttcgtgtattgtacacagccttaccctgttttttacacaagaggctgttt 39029172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 7038122 - 7038051
Alignment:
Q  171 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||||||| ||||||||||| |||||||||||||| ||||||| || || |||||| ||||||||||||    
T  7038122 gtgtattgtacgaagtcttaccctattttttacacaagaagctgttt-caggacttgaacctgtgacctttca 7038051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 243
Target Start/End: Original strand, 41018807 - 41018930
Alignment:
Q  119 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttta 218  Q
    |||||||||||| ||  |||||| |||| ||| ||| ||||||||| |||| |||||||||||| || ||||||||   |||||||||||||| |||||     
T  41018807 gtgcactaaagcccctccatacgcaaggtctgggaaggggtcccactatttggtgtattgtacgtagccttaccct-aattttacacaagaggttgtttc 41018905  T
Q  219 cacgatttgaacttgtgacctttca 243  Q
    || || ||||||  |||||||||||    
T  41018906 caggacttgaacccgtgacctttca 41018930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 7385522 - 7385613
Alignment:
Q  152 gaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||||||||||||| |||||||| || ||  |||||||| ||||||||||| |||||||||| || |  ||||||  |||||||||||    
T  7385522 gaaagggtcccaccatttggtgtattgcacacaaccttaccctattttttacacatgaggctgtttccagggcttgaacccgtgacctttca 7385613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 217
Target Start/End: Complemental strand, 49796911 - 49796822
Alignment:
Q  127 aagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    ||||||||||||||| | ||   | ||| |||||||||||||| ||||||||||||||| |||||| || |||| ||||||||||||||||    
T  49796911 aagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccatg-ttttaacacaagaggctgttt 49796822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 243
Target Start/End: Complemental strand, 54967151 - 54967019
Alignment:
Q  109 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaag 208  Q
    ||||| || ||||||| |||||||||||||| ||| ||   | ||| |||||||||||||| || ||||||| |||  ||||||||||||||||||||||    
T  54967151 gggcagcccggtgcac-aaagctcccgcatatgtagggtacgggaaggggtcccaccatttggtatattgta-gcaaccttaccctgttttttacacaag 54967054  T
Q  209 aggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||| | ||| ||  | |||||| ||||||||||||    
T  54967053 aggttctttccagaacttgaacatgtgacctttca 54967019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 487187 - 487272
Alignment:
Q  159 tcccaccattt-agtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||| ||||||||||||||||  ||||| |||||| ||||||||||| ||||| || || ||||||  |||||||||||    
T  487187 tcccaccattttagtgtattgtacgcagctttaccttgttttatacacaagaggttgtttccaagacttgaacccgtgacctttca 487272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 107 - 196
Target Start/End: Complemental strand, 20225210 - 20225119
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccat--ttagtgtattgtacgcagtcttaccctgt 196  Q
    |||||||||| |||||||||||||||||||||| |   || | | ||| ||||||||||||  || ||||||||||||||| ||||||||||    
T  20225210 aagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgt 20225119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 107 - 202
Target Start/End: Original strand, 20908637 - 20908733
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca-tttagtgtattgtacgcagtcttaccctgtttttta 202  Q
    ||||||| ||| ||||||||||||||||||||||| | ||   | ||| ||||||||||| ||| ||||||||||||||| |||||| | |||||||    
T  20908637 aagggcagccttgtgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgcagccttaccttctttttta 20908733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 25343257 - 25343189
Alignment:
Q  171 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacct 239  Q
    ||||||||||||||| |||||||||||||||||||||||| || ||| ||  | |||||| ||||||||    
T  25343257 gtgtattgtacgcagccttaccctgttttttacacaagagactatttccagaacttgaacctgtgacct 25343189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 48327814 - 48327869
Alignment:
Q  157 ggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttacacaagag 210  Q
    ||||||||||||  | |||||||||| |||||||||||||||||||||||||||||    
T  48327814 ggtcccaccattattggtgtattgtatgcagtcttaccctgttttttacacaagag 48327869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 243
Target Start/End: Original strand, 39077800 - 39077931
Alignment:
Q  110 ggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagg-gtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaag 208  Q
    ||||||| ||||||||| |||||||||||| | | || | | |||||  ||| |||||||| || |||||||||||  |||||||||||||  |||||||    
T  39077800 ggcaacccggtgcactagagctcccgcatatgcagggtccg-gaaagatgtctcaccatttggtatattgtacgcaaccttaccctgtttt--acacaag 39077896  T
Q  209 aggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||| || || ||||||  |||||||||||    
T  39077897 aggctgtttccaggacttgaacccgtgacctttca 39077931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 47441580 - 47441667
Alignment:
Q  156 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||| ||||||| ||||||||||| ||| ||||||||| |||||||| ||||| ||||||    || |||||| ||||||||||||    
T  47441580 gggtccaaccatttggtgtattgtacacagccttaccctgatttttacaaaagagactgtttcttggacttgaacctgtgacctttca 47441667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 243
Target Start/End: Original strand, 49938611 - 49938727
Alignment:
Q  124 ctaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacg 222  Q
    |||||||||||||||| | | ||  || ||| |||||||||||||| | |||||||||| |   ||||||| ||||| ||||||||||||||||| || |    
T  49938611 ctaaagctcccgcatatgcagggtatgggaaggggtcccaccattttggtgtattgtacac---cttaccccgtttt-tacacaagaggctgtttccagg 49938706  T
Q  223 atttgaacttgtgacctttca 243  Q
    | |||||| ||||||||||||    
T  49938707 acttgaacctgtgacctttca 49938727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 14590922 - 14590861
Alignment:
Q  157 ggtcccaccatttagtgtattgtacgcagtcttaccctgtt-ttttacacaagaggctgttt 217  Q
    |||||||||||||  ||||||||| |||| ||||||||||| ||||| ||||||||||||||    
T  14590922 ggtcccaccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgttt 14590861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 185
Target Start/End: Original strand, 30352581 - 30352661
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca--tttagtgtattgtacgcag 185  Q
    |||||||||  |||||||||||||||||||||||| | || | | ||| |||||||||||  ||| |||||||||||||||    
T  30352581 aagggcaacacggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccatttttggtgtattgtacgcag 30352661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 38755909 - 38755970
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt 168  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||    
T  38755909 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 38755970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 30581515 - 30581591
Alignment:
Q  156 gggtcccaccatttag-tgtattgtacgcagtcttaccctgtttt-ttacacaagaggctgtttacacgatttgaac 230  Q
    |||||||||||||| | |||||||||| ||  ||||||||||||| |||||||||||| ||||| ||||| ||||||    
T  30581515 gggtcccaccattttggtgtattgtacacacccttaccctgtttttttacacaagaggttgtttccacgacttgaac 30581591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 35532135 - 35532092
Alignment:
Q  98 aaaaacaataagggcaacctggtgcactaaagctcccgcatacg 141  Q
    ||||| || |||||||||| ||||||||||||||||||||||||    
T  35532135 aaaaaaaaaaagggcaacccggtgcactaaagctcccgcatacg 35532092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 2813262 - 2813169
Alignment:
Q  107 aagggcaacctggtgcact-aaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgtt 197  Q
    |||||||| | |||||||| |||||||||||||||| |  |   | |||||||||||||||||  |  ||||||||||||||||||||||||||    
T  2813262 aagggcaatccggtgcacttaaagctcccgcatacgcatcgttcgggaaagggtcccaccattattgatgtattgtacgcagtcttaccctgtt 2813169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 141
Target Start/End: Complemental strand, 11394986 - 11394952
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacg 141  Q
    |||||||||| ||||||||||||||||||||||||    
T  11394986 aagggcaacccggtgcactaaagctcccgcatacg 11394952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 141
Target Start/End: Complemental strand, 11404713 - 11404679
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacg 141  Q
    |||||||||| ||||||||||||||||||||||||    
T  11404713 aagggcaacccggtgcactaaagctcccgcatacg 11404679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 213
Target Start/End: Original strand, 23580281 - 23580315
Alignment:
Q  179 tacgcagtcttaccctgttttttacacaagaggct 213  Q
    ||||||||||| |||||||||||||||||||||||    
T  23580281 tacgcagtcttcccctgttttttacacaagaggct 23580315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 30496374 - 30496457
Alignment:
Q  158 gtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||| |||||| |||||||||| |||| |||||||   | ||||||||||||||||||| || || ||||||  |||||||||||    
T  30496374 gtccccccatttggtgtattgtatgcagccttacccg--tgtttacacaagaggctgtttccatgacttgaacacgtgacctttca 30496457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 38786743 - 38786673
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtatt 177  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| |||||||    
T  38786743 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatt 38786673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 141
Target Start/End: Original strand, 40553938 - 40553972
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacg 141  Q
    |||||||||| ||||||||||||||||||||||||    
T  40553938 aagggcaacccggtgcactaaagctcccgcatacg 40553972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 51420644 - 51420598
Alignment:
Q  171 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| |||||    
T  51420644 gtgtattgtacccagccttaccctgttttctacacaagaggttgttt 51420598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 33836488 - 33836549
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt 168  Q
    |||||||||| | |||||||||||||||||||||| | || | | ||| |||||||||||||    
T  33836488 aagggcaacccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 33836549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 230
Target Start/End: Original strand, 10277758 - 10277879
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||| | ||| ||||| | |||||||||| | | || ||| ||| ||||  |||||||| ||||||||||||||| |||| ||  | ||||| |||    
T  10277758 aagggcaatccggttcactagaactcccgcatatgcagggtctgggaaggggtttcaccatttggtgtattgtacgcagccttatcc--tattttataca 10277855  T
Q  207 agaggctgtttacacgatttgaac 230  Q
    |||||||||||  | |||||||||    
T  10277856 agaggctgtttcaaggatttgaac 10277879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 199
Target Start/End: Complemental strand, 16494338 - 16494259
Alignment:
Q  122 cactaaagctcccgcatacgtaagggctgcgaaagggtcccacca--tttagtgtattgtacgcagtcttaccctgtttt 199  Q
    |||||||||| ||||||||  | || ||| |||||||||||||||  ||| |||||||||| ||||  ||||||||||||    
T  16494338 cactaaagcttccgcatacacagggtctgggaaagggtcccaccatttttggtgtattgtatgcagctttaccctgtttt 16494259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 239
Target Start/End: Original strand, 32478793 - 32478918
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||| ||| ||||||| ||||||||||||||||   || | | ||| |||||||||||||| |||||||     ||| ||||||||| |||||||||     
T  32478793 aagggccacccggtgcac-aaagctcccgcatacgctgggtccgggaaggggtcccaccatttggtgtatt-----cagccttaccctg-tttttacact 32478885  T
Q  207 agaggctgtttacacgatttgaacttgtgacct 239  Q
    ||||| ||||| || || |||||| ||||||||    
T  32478886 agaggttgtttccaggacttgaacctgtgacct 32478918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 139
Target Start/End: Complemental strand, 32484367 - 32484335
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcata 139  Q
    |||||||||| ||||||||||||||||||||||    
T  32484367 aagggcaacccggtgcactaaagctcccgcata 32484335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 35894511 - 35894563
Alignment:
Q  156 gggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaa 207  Q
    |||||||||||||| | |||||||||||||  |||||| ||||||||||||||    
T  35894511 gggtcccaccattttggtgtattgtacgcacacttaccgtgttttttacacaa 35894563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 44718701 - 44718641
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccat 167  Q
    |||||||||| ||||  |||||||||||||||||| | || ||| ||| ||||||||||||    
T  44718701 aagggcaacccggtgtgctaaagctcccgcatacgcagggtctgggaaggggtcccaccat 44718641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 139
Target Start/End: Complemental strand, 56323034 - 56323002
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcata 139  Q
    |||||||||| ||||||||||||||||||||||    
T  56323034 aagggcaacccggtgcactaaagctcccgcata 56323002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 63; Significance: 2e-27; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 98 - 216
Target Start/End: Original strand, 24764 - 24882
Alignment:
Q  98 aaaaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtt 197  Q
    ||||| || |||||||||| | |||||||||||||||||||||| | ||   | ||| |||||||||||||| |||| |||||||||| |||||||||||    
T  24764 aaaaaaaaaaagggcaaccggctgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtgttgtacgcagccttaccctgtt 24863  T
Q  198 ttttacacaagaggctgtt 216  Q
    |||||||||||||||||||    
T  24864 ttttacacaagaggctgtt 24882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 46965 - 46855
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||  |||||||| |||||||||||    
T  46965 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttacaca 46866  T
Q  207 agaggctgttt 217  Q
    ||||| |||||    
T  46865 agaggttgttt 46855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 217
Target Start/End: Complemental strand, 43780 - 43683
Alignment:
Q  119 gtgcactaaagctcccgcatacgtaagggctgcgaaaggg-tcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    |||||||| |||||||||||| | | || | | ||||||| ||||||||||| ||||||||||||||| |||||| ||  |||||||||||| |||||||    
T  43780 gtgcactagagctcccgcatatgcagggtccgagaaaggggtcccaccatttggtgtattgtacgcagccttaccttg--ttttacacaagacgctgttt 43683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 169
Target Start/End: Original strand, 46710 - 46770
Alignment:
Q  109 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattt 169  Q
    ||||| |||| |||| ||||||||||||||||| | || ||| ||| ||||||||||||||    
T  46710 gggcagcctgatgcattaaagctcccgcatacgcagggtctgggaaggggtcccaccattt 46770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 13025 - 13160
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||||||| |||||||||| | || ||| ||| |||||||||||||  ||||||||||||||| |||||| || ||||||| ||    
T  13025 aagggcaacccggtgcactaaagcccccgcatacgcagggtctgggaaggggtcccaccattcggtgtattgtacgcagccttaccttg-tttttacgca 13123  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||| || || ||||||  |||||||||||    
T  13124 agaggctgtttccaggacttgaaccggtgacctttca 13160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 30711 - 30577
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| | |||||||  |||||||||    
T  30711 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccctaccctg--ttttacaca 30614  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||| || || ||||||  |||||||||||    
T  30613 agaggctgtttccaggacttgaaccggtgacctttca 30577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 107 - 230
Target Start/End: Original strand, 48635 - 48756
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  48635 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 48732  T
Q  207 agaggctgtttacacgatttgaac 230  Q
    ||||||||||| ||| | ||||||    
T  48733 agaggctgtttccaccacttgaac 48756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 217
Target Start/End: Complemental strand, 10932 - 10834
Alignment:
Q  119 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 217  Q
    ||||||||||||||||||||||| | || | | ||| |||||||||||||| |||||||| |||||| | ||||||||||||||||||||||| |||||    
T  10932 gtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattggacgcagccctaccctgttttttacacaagaggttgttt 10834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 107 - 210
Target Start/End: Original strand, 72868 - 72971
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    ||||||||||||||||||||||||||||||||||| | |  | | ||| |||| | ||||||| |||||||||| |||| |||||| |||||||||||||    
T  72868 aagggcaacctggtgcactaaagctcccgcatacgcaggttccgggaaggggtactaccatttggtgtattgtaggcagccttaccgtgttttttacaca 72967  T
Q  207 agag 210  Q
    ||||    
T  72968 agag 72971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 11263 - 11129
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 206  Q
    |||||||||||||||||||| |||||||||||| | | || | | ||| | |||||||||||| |||||||||| |||| ||||  || | |||||||||    
T  11263 aagggcaacctggtgcactagagctcccgcatatgcagggtccgggaaggtgtcccaccatttggtgtattgtaagcagcctta--ctttgttttacaca 11166  T
Q  207 agaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||| || || ||||||  |||||||||||    
T  11165 agaggctgtttccaggacttgaacccgtgacctttca 11129  T

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Target: scaffold0187 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 243
Target Start/End: Original strand, 10052 - 10185
Alignment:
Q  108 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaa 207  Q
    ||||||||| ||||||||  |||||| ||||| | | || | | ||| ||||||||| |||| ||||||||||||||||||||| |||  ||||||||||    
T  10052 agggcaacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttactctg--ttttacacaa 10149  T
Q  208 gaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||||| || || ||||||  |||||||||||    
T  10150 gaggctgtttccaggacttgaacccgtgacctttca 10185  T

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Target: scaffold0187; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 243
Target Start/End: Original strand, 20380 - 20513
Alignment:
Q  108 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaa 207  Q
    ||||||||| ||||||||  |||||| ||||| | | || | | ||| ||||||||| |||| ||||||||||||||||||||| |||  ||||||||||    
T  20380 agggcaacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttactctg--ttttacacaa 20477  T
Q  208 gaggctgtttacacgatttgaacttgtgacctttca 243  Q
    |||||||||| || || ||||||  |||||||||||    
T  20478 gaggctgtttccaggacttgaacccgtgacctttca 20513  T

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Target: scaffold1176 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 243
Target Start/End: Original strand, 1591 - 1722
Alignment:
Q  110 ggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaaga 209  Q
    ||||||||||||||||||||||||||||||||   || | | ||| |||||||| ||||| |||||||||| |||| |||| ||||  ||||||||||||    
T  1591 ggcaacctggtgcactaaagctcccgcatacgccgggtccgggaaggggtcccatcatttggtgtattgtatgcagccttatcctg--ttttacacaaga 1688  T
Q  210 ggctgtttacacgatttgaacttgtgacctttca 243  Q
    || ||||| || || ||||||   ||||||||||    
T  1689 ggttgttttcaggacttgaacccatgacctttca 1722  T

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Target: scaffold0036 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 35063 - 35152
Alignment:
Q  152 gaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttt-ttacacaagaggctgtttacacgatttgaacttgtgacctt 240  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||   ||||||||| |||||| || || ||||||  ||||||||    
T  35063 gaaagggtcccaccatttggtgtattgtacgcagccttaccctgttttcacacacaagagactgttttcaggacttgaacccgtgacctt 35152  T

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Target: scaffold0167 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 23714 - 23610
Alignment:
Q  126 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatt 225  Q
    ||||||||| |||||  |||| ||| ||| ||||||||||||||  |  ||||||||||| || |||||||||||||||||||||| ||||| || || |    
T  23714 aaagctcccacatactcaaggtctgggaaggggtcccaccatttgctacattgtacgcagcctcaccctgttttttacacaagaggttgtttgcaagact 23615  T
Q  226 tgaac 230  Q
    |||||    
T  23614 tgaac 23610  T

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Target: scaffold0180 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 193
Target Start/End: Original strand, 24134 - 24220
Alignment:
Q  107 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccc 193  Q
    |||||||| | ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||    
T  24134 aagggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccc 24220  T

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Target: scaffold0028 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 33021 - 32960
Alignment:
Q  151 cgaaagggtcccacca-tttagtgtattgtacgcagtcttaccctgttttttacacaagagg 211  Q
    |||||||||||||||| ||| ||||||||||  ||||||||| |||||||||||| ||||||    
T  33021 cgaaagggtcccaccaatttggtgtattgtatacagtcttactctgttttttacagaagagg 32960  T

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Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 226456 - 226517
Alignment:
Q  157 ggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacacaagaggctgttt 217  Q
    |||||||||||||  ||||||||| |||| ||||||||| ||||||| ||||||||||||||    
T  226456 ggtcccaccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgttt 226517  T

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Target: scaffold0254 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 4227 - 4155
Alignment:
Q  171 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 243  Q
    ||||||||||||||  |||| ||||| |||||||||||||| ||||| || || ||||||  |||||||||||    
T  4227 gtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacctttca 4155  T

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Target: scaffold0954 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 3667 - 3572
Alignment:
Q  118 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggct 213  Q
    |||||||||||||| ||||||||| | ||   | ||| |||||||| ||||  ||||||| ||||||| |||||| | | ||||||||||||||||    
T  3667 ggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcattcggtgtattatacgcagccttaccttatattttacacaagaggct 3572  T

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Target: scaffold0194 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 193
Target Start/End: Complemental strand, 24792 - 24696
Alignment:
Q  97 taaaaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccc 193  Q
    |||||| || |||||||| | |||||||| ||||||||| ||||| | || |||  || |||  |||| |||| ||||||| |||||||||||||||    
T  24792 taaaaaaaaaaagggcaatcaggtgcactgaagctcccgtatacgcagggtctggaaagggggtccactatttggtgtattatacgcagtcttaccc 24696  T

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