View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17515_low_8 (Length: 466)

Name: NF17515_low_8
Description: NF17515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17515_low_8
NF17515_low_8
[»] chr2 (50 HSPs)
chr2 (19-457)||(37981608-37982056)
chr2 (266-443)||(2288461-2288636)
chr2 (324-449)||(29940939-29941064)
chr2 (142-452)||(15284308-15284625)
chr2 (175-449)||(16155401-16155678)
chr2 (320-447)||(18176430-18176557)
chr2 (320-440)||(2085548-2085668)
chr2 (183-443)||(7487953-7488213)
chr2 (319-443)||(21736565-21736689)
chr2 (183-297)||(14920446-14920560)
chr2 (324-437)||(45546937-45547050)
chr2 (368-447)||(2372965-2373044)
chr2 (368-455)||(9120048-9120134)
chr2 (183-382)||(36598291-36598490)
chr2 (183-293)||(10441445-10441555)
chr2 (329-442)||(3858156-3858269)
chr2 (324-441)||(45485364-45485480)
chr2 (324-444)||(27090634-27090754)
chr2 (183-288)||(24935961-24936066)
chr2 (368-443)||(16269582-16269657)
chr2 (329-443)||(39698567-39698681)
chr2 (318-424)||(35172598-35172704)
chr2 (368-453)||(378860-378945)
chr2 (183-264)||(2085725-2085806)
chr2 (318-379)||(16146884-16146945)
chr2 (183-296)||(21736428-21736541)
chr2 (368-449)||(24776240-24776321)
chr2 (183-288)||(25684645-25684750)
chr2 (399-443)||(6289539-6289583)
chr2 (368-443)||(11534835-11534910)
chr2 (324-443)||(20157722-20157841)
chr2 (368-443)||(22552007-22552082)
chr2 (367-418)||(26601443-26601494)
chr2 (368-427)||(32125157-32125216)
chr2 (368-447)||(43078562-43078641)
chr2 (367-442)||(44765667-44765742)
chr2 (368-450)||(3463555-3463637)
chr2 (368-442)||(14198820-14198894)
chr2 (397-443)||(14920619-14920665)
chr2 (324-418)||(24193574-24193668)
chr2 (423-453)||(24935282-24935312)
chr2 (423-453)||(25683975-25684005)
chr2 (368-449)||(26788669-26788750)
chr2 (251-296)||(35172529-35172574)
chr2 (367-443)||(1789333-1789409)
chr2 (175-227)||(16147040-16147092)
chr2 (211-263)||(17330452-17330504)
chr2 (367-443)||(19144915-19144991)
chr2 (367-419)||(28740526-28740578)
chr2 (368-440)||(28844449-28844521)
[»] chr4 (54 HSPs)
chr4 (57-451)||(53594078-53594471)
chr4 (127-449)||(28100349-28100673)
chr4 (95-382)||(37370620-37370910)
chr4 (142-443)||(41761979-41762280)
chr4 (171-449)||(38230766-38231045)
chr4 (183-440)||(28846925-28847183)
chr4 (147-443)||(16018903-16019198)
chr4 (329-450)||(44646714-44646835)
chr4 (324-443)||(8583970-8584089)
chr4 (320-441)||(53271911-53272032)
chr4 (324-443)||(44929877-44929996)
chr4 (318-381)||(20538993-20539057)
chr4 (320-443)||(16653254-16653377)
chr4 (368-453)||(24131214-24131299)
chr4 (324-443)||(8880444-8880563)
chr4 (324-443)||(25935786-25935906)
chr4 (320-443)||(27529085-27529202)
chr4 (371-443)||(42218416-42218488)
chr4 (324-440)||(52109409-52109525)
chr4 (329-443)||(56397443-56397557)
chr4 (327-364)||(1848495-1848532)
chr4 (371-448)||(33450149-33450226)
chr4 (399-443)||(35261615-35261659)
chr4 (324-443)||(3435922-3436036)
chr4 (368-447)||(28541583-28541662)
chr4 (329-443)||(37915674-37915788)
chr4 (250-296)||(42315047-42315093)
chr4 (368-449)||(23987139-23987220)
chr4 (329-417)||(37828605-37828693)
chr4 (142-263)||(53272090-53272211)
chr4 (183-296)||(56397591-56397704)
chr4 (368-444)||(7250015-7250091)
chr4 (315-447)||(543861-543989)
chr4 (324-443)||(7820096-7820215)
chr4 (368-455)||(20021221-20021308)
chr4 (368-443)||(39479599-39479674)
chr4 (324-443)||(45332666-45332785)
chr4 (368-443)||(54509714-54509789)
chr4 (368-447)||(55302728-55302807)
chr4 (173-301)||(5117104-5117233)
chr4 (368-449)||(41881325-41881407)
chr4 (368-442)||(47685145-47685219)
chr4 (368-449)||(25445977-25446057)
chr4 (368-421)||(32951078-32951131)
chr4 (368-421)||(34228824-34228877)
chr4 (368-440)||(5441296-5441368)
chr4 (368-452)||(25504881-25504964)
chr4 (368-440)||(27767948-27768020)
chr4 (368-440)||(30967541-30967613)
chr4 (329-381)||(36094279-36094331)
chr4 (371-443)||(40537390-40537462)
chr4 (320-380)||(42314962-42315022)
chr4 (367-419)||(49835054-49835106)
chr4 (368-440)||(54341036-54341108)
[»] chr3 (53 HSPs)
chr3 (87-452)||(10225396-10225762)
chr3 (87-452)||(10215767-10216133)
chr3 (87-452)||(10104619-10104986)
chr3 (127-443)||(45926712-45927033)
chr3 (132-423)||(46749271-46749562)
chr3 (327-431)||(10104982-10105086)
chr3 (327-431)||(10225758-10225862)
chr3 (327-431)||(10216129-10216233)
chr3 (324-452)||(50900412-50900540)
chr3 (320-447)||(45215362-45215489)
chr3 (324-443)||(19552113-19552232)
chr3 (327-450)||(38682419-38682541)
chr3 (324-449)||(36054972-36055097)
chr3 (324-443)||(24150797-24150916)
chr3 (324-443)||(26555814-26555933)
chr3 (375-450)||(10067700-10067775)
chr3 (324-443)||(30588839-30588958)
chr3 (170-440)||(44701546-44701816)
chr3 (327-452)||(52024167-52024293)
chr3 (324-452)||(25713404-25713532)
chr3 (324-443)||(26005948-26006067)
chr3 (327-442)||(35730933-35731048)
chr3 (329-451)||(34292474-34292596)
chr3 (368-449)||(13662542-13662623)
chr3 (324-441)||(26293532-26293649)
chr3 (320-381)||(44042006-44042067)
chr3 (324-443)||(38629765-38629884)
chr3 (330-379)||(10055755-10055804)
chr3 (368-421)||(29449102-29449155)
chr3 (142-243)||(34292295-34292396)
chr3 (315-442)||(12103358-12103485)
chr3 (368-443)||(6035294-6035369)
chr3 (318-443)||(23697005-23697130)
chr3 (183-296)||(23697155-23697268)
chr3 (318-443)||(23715460-23715585)
chr3 (318-443)||(23733916-23734041)
chr3 (318-443)||(23752374-23752499)
chr3 (368-421)||(35337646-35337699)
chr3 (368-440)||(10660427-10660499)
chr3 (142-226)||(12103185-12103269)
chr3 (368-452)||(12734082-12734166)
chr3 (368-443)||(996327-996402)
chr3 (368-443)||(3206438-3206513)
chr3 (327-438)||(6784069-6784180)
chr3 (368-447)||(37820719-37820798)
chr3 (368-443)||(53184082-53184157)
chr3 (250-296)||(85899-85945)
chr3 (368-421)||(19253738-19253791)
chr3 (368-421)||(44762279-44762332)
chr3 (368-448)||(29029890-29029970)
chr3 (368-440)||(36674372-36674444)
chr3 (252-300)||(43601766-43601814)
chr3 (388-440)||(50901203-50901255)
[»] chr5 (29 HSPs)
chr5 (87-452)||(26795238-26795605)
chr5 (127-443)||(28594208-28594527)
chr5 (127-444)||(27786209-27786520)
chr5 (226-452)||(26806442-26806669)
chr5 (142-443)||(9689127-9689420)
chr5 (327-431)||(26795601-26795705)
chr5 (327-431)||(26806665-26806769)
chr5 (142-440)||(2275987-2276286)
chr5 (315-443)||(39753435-39753563)
chr5 (324-443)||(40410590-40410709)
chr5 (183-430)||(378245-378494)
chr5 (318-443)||(3604412-3604537)
chr5 (368-453)||(7857015-7857100)
chr5 (324-441)||(10571113-10571230)
chr5 (324-457)||(17518414-17518547)
chr5 (183-288)||(36682051-36682156)
chr5 (368-452)||(33656284-33656368)
chr5 (368-441)||(5273202-5273276)
chr5 (184-296)||(3604277-3604389)
chr5 (399-451)||(6902691-6902743)
chr5 (329-440)||(14000307-14000418)
chr5 (368-443)||(6828801-6828876)
chr5 (368-443)||(7016938-7017013)
chr5 (368-443)||(21146957-21147032)
chr5 (367-421)||(16894100-16894153)
chr5 (368-449)||(6460676-6460757)
chr5 (368-440)||(4550498-4550570)
chr5 (144-216)||(40460363-40460435)
chr5 (320-364)||(40460538-40460582)
[»] chr1 (41 HSPs)
chr1 (142-447)||(27198267-27198573)
chr1 (127-443)||(42657714-42658031)
chr1 (138-443)||(19007358-19007663)
chr1 (171-443)||(48203348-48203621)
chr1 (171-443)||(48194590-48194863)
chr1 (330-453)||(19893441-19893564)
chr1 (342-449)||(51826819-51826926)
chr1 (183-442)||(14555134-14555394)
chr1 (324-443)||(26882791-26882910)
chr1 (250-443)||(43553536-43553729)
chr1 (324-449)||(45318454-45318579)
chr1 (320-440)||(52179652-52179772)
chr1 (315-443)||(14229007-14229136)
chr1 (324-449)||(52705387-52705512)
chr1 (329-440)||(49230772-49230883)
chr1 (324-447)||(9191127-9191250)
chr1 (327-440)||(39757984-39758096)
chr1 (183-296)||(39758120-39758232)
chr1 (327-440)||(39763338-39763450)
chr1 (183-296)||(39763474-39763586)
chr1 (324-443)||(10896800-10896919)
chr1 (368-447)||(35679370-35679449)
chr1 (324-443)||(36402247-36402366)
chr1 (367-445)||(9831297-9831375)
chr1 (329-442)||(28039377-28039490)
chr1 (398-443)||(34772311-34772356)
chr1 (368-440)||(25612043-25612115)
chr1 (368-443)||(953702-953777)
chr1 (368-443)||(28824614-28824689)
chr1 (320-378)||(4288998-4289056)
chr1 (142-228)||(4289149-4289235)
chr1 (367-449)||(45760251-45760333)
chr1 (142-228)||(51826618-51826704)
chr1 (368-453)||(6312447-6312532)
chr1 (368-449)||(22183247-22183328)
chr1 (371-440)||(45272473-45272542)
chr1 (368-421)||(50192793-50192846)
chr1 (368-440)||(9322742-9322814)
chr1 (183-243)||(14228884-14228944)
chr1 (368-440)||(15835295-15835367)
chr1 (367-443)||(33025395-33025471)
[»] chr8 (39 HSPs)
chr8 (127-382)||(24317972-24318233)
chr8 (318-443)||(17790436-17790561)
chr8 (324-447)||(2112787-2112910)
chr8 (320-443)||(14061546-14061669)
chr8 (183-443)||(42366050-42366303)
chr8 (327-443)||(1605981-1606097)
chr8 (324-452)||(28619834-28619962)
chr8 (324-443)||(42274972-42275091)
chr8 (324-439)||(43605329-43605444)
chr8 (324-449)||(40265246-40265371)
chr8 (324-452)||(10802736-10802863)
chr8 (332-455)||(24296625-24296748)
chr8 (324-443)||(29260241-29260360)
chr8 (324-443)||(35142042-35142161)
chr8 (183-443)||(43488906-43489167)
chr8 (368-439)||(7148050-7148121)
chr8 (368-449)||(9457537-9457618)
chr8 (368-449)||(42937244-42937325)
chr8 (324-443)||(4655047-4655166)
chr8 (320-453)||(10127518-10127649)
chr8 (368-451)||(42735518-42735601)
chr8 (368-445)||(7507140-7507217)
chr8 (368-443)||(41386879-41386955)
chr8 (368-443)||(23115409-23115484)
chr8 (368-443)||(24214832-24214907)
chr8 (368-418)||(14723961-14724011)
chr8 (183-245)||(24296475-24296537)
chr8 (142-263)||(14061727-14061848)
chr8 (368-421)||(26373717-26373770)
chr8 (368-441)||(41478989-41479062)
chr8 (368-445)||(42938358-42938435)
chr8 (368-440)||(43166889-43166961)
chr8 (399-443)||(9209036-9209080)
chr8 (368-440)||(14782376-14782448)
chr8 (399-443)||(30382714-30382758)
chr8 (329-440)||(32497376-32497487)
chr8 (329-417)||(38806849-38806937)
chr8 (399-443)||(40013510-40013554)
chr8 (368-440)||(44726051-44726123)
[»] scaffold0287 (1 HSPs)
scaffold0287 (143-443)||(11580-11872)
[»] chr7 (57 HSPs)
chr7 (143-443)||(3634213-3634505)
chr7 (138-443)||(46037128-46037434)
chr7 (324-453)||(27418607-27418736)
chr7 (253-438)||(9598958-9599145)
chr7 (253-438)||(9826529-9826716)
chr7 (324-449)||(151852-151977)
chr7 (135-223)||(9825203-9825291)
chr7 (135-223)||(10727128-10727216)
chr7 (368-447)||(31494235-31494314)
chr7 (327-450)||(34115441-34115564)
chr7 (324-427)||(35090071-35090174)
chr7 (320-391)||(37042524-37042595)
chr7 (324-443)||(47915022-47915141)
chr7 (329-383)||(41060045-41060099)
chr7 (318-443)||(12253350-12253475)
chr7 (329-442)||(26201532-26201644)
chr7 (368-440)||(39783986-39784058)
chr7 (172-288)||(42678005-42678121)
chr7 (324-439)||(30110807-30110922)
chr7 (142-288)||(34115255-34115401)
chr7 (327-449)||(47031239-47031361)
chr7 (183-288)||(36355307-36355412)
chr7 (142-243)||(41060187-41060288)
chr7 (339-443)||(8116716-8116820)
chr7 (320-428)||(42678155-42678263)
chr7 (324-436)||(43057646-43057758)
chr7 (368-443)||(8078286-8078361)
chr7 (368-443)||(30440687-30440762)
chr7 (255-305)||(37042458-37042508)
chr7 (329-443)||(37649666-37649778)
chr7 (183-288)||(24939474-24939578)
chr7 (368-421)||(34695144-34695197)
chr7 (368-440)||(509585-509657)
chr7 (369-445)||(24939659-24939735)
chr7 (327-443)||(40097094-40097210)
chr7 (397-449)||(44623502-44623554)
chr7 (343-442)||(5572538-5572637)
chr7 (368-447)||(31638762-31638841)
chr7 (368-443)||(44343637-44343712)
chr7 (250-296)||(12253281-12253327)
chr7 (329-379)||(46202519-46202569)
chr7 (368-421)||(10676619-10676672)
chr7 (368-421)||(18914976-18915029)
chr7 (368-449)||(28342225-28342306)
chr7 (173-274)||(32630868-32630969)
chr7 (183-296)||(33474669-33474782)
chr7 (411-452)||(43057840-43057880)
chr7 (368-449)||(47914151-47914232)
chr7 (173-230)||(48999141-48999198)
chr7 (368-440)||(7993029-7993101)
chr7 (329-417)||(15913381-15913469)
chr7 (320-356)||(21067021-21067057)
chr7 (368-440)||(37327814-37327886)
chr7 (329-440)||(39027984-39028095)
chr7 (368-456)||(39219576-39219664)
chr7 (368-440)||(41827201-41827273)
chr7 (368-416)||(46405672-46405720)
[»] chr6 (23 HSPs)
chr6 (137-427)||(708931-709221)
chr6 (171-443)||(7100164-7100437)
chr6 (171-443)||(8794193-8794466)
chr6 (315-443)||(5957126-5957254)
chr6 (342-443)||(31609675-31609776)
chr6 (368-443)||(29834294-29834369)
chr6 (368-443)||(29865728-29865803)
chr6 (326-443)||(3110252-3110369)
chr6 (320-364)||(4653377-4653421)
chr6 (258-306)||(11007622-11007670)
chr6 (324-443)||(6476678-6476797)
chr6 (329-447)||(10009608-10009721)
chr6 (368-449)||(14262674-14262755)
chr6 (183-288)||(35164960-35165065)
chr6 (172-296)||(5957277-5957401)
chr6 (99-180)||(11006978-11007061)
chr6 (375-439)||(11007698-11007762)
chr6 (368-443)||(2300979-2301054)
chr6 (183-302)||(10009463-10009582)
chr6 (368-443)||(30877852-30877927)
chr6 (423-453)||(35165705-35165735)
chr6 (368-440)||(31895588-31895660)
chr6 (368-440)||(34773301-34773373)
[»] scaffold0016 (1 HSPs)
scaffold0016 (324-452)||(81747-81875)
[»] scaffold0472 (1 HSPs)
scaffold0472 (172-443)||(1697-1969)
[»] scaffold0237 (1 HSPs)
scaffold0237 (368-443)||(21422-21497)
[»] scaffold0042 (1 HSPs)
scaffold0042 (368-440)||(58276-58348)
[»] scaffold1504 (1 HSPs)
scaffold1504 (368-440)||(756-828)
[»] scaffold0543 (1 HSPs)
scaffold0543 (368-440)||(10453-10525)
[»] scaffold0153 (1 HSPs)
scaffold0153 (399-443)||(34842-34886)
[»] scaffold0113 (1 HSPs)
scaffold0113 (368-452)||(39095-39178)


Alignment Details
Target: chr2 (Bit Score: 312; Significance: 1e-176; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 19 - 457
Target Start/End: Complemental strand, 37982056 - 37981608
Alignment:
Q  19 agaaagaagaagtatgatggcatagataaaagcaagacatg-----------aattcacaatatctggaactagttggaaaaatgaatctcgttggacag 107  Q
    |||||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37982056 agaaagaagaagtatgatggcatagataaaagcaagacatgtaaggtaaatgaattcacaatatctggaactagttggaaaaatgaatctcgttggacag 37981957  T
Q  108 caaggaaaagaaaattgcgagtctcacaaatttgtgtgagattgttgaatgaacattttgttcatatttttaatcaaaaagtctcacaaaatctattcca 207  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||| |||||||||    
T  37981956 caaggaaaagaaaattgtgagtctcacaaatttgtgtgagattgttgaatgagcattttgttcacatttttaattaaaa-gtctcacaaattctattcca 37981858  T
Q  208 taaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattgaataccaacggatttcattgcattgn 307  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  37981857 taaaagaatccatcaaaatctatcaatttttgaatacctaaggacattttataagttgtgagaaatcctaattgaataccaacggatttcattgcattga 37981758  T
Q  308 nnnnnnntcataattgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtc 407  Q
           |||| |||||| |||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||| ||||||||||| ||||| ||    
T  37981757 aaaaaaatcatgattgtcttaattgaataccacaaaatttatttatattttataaaagttttgattgaataccacatgacttttctataatcaaaaaatc 37981658  T
Q  408 ttctaaaatcccttgaaatctcaatccaatacaccctccttaatttcatc 457  Q
    |||||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  37981657 ttctaaaatctcttgaaatctcaatctaatacacccttcttaatttcatc 37981608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 266 - 443
Target Start/End: Complemental strand, 2288636 - 2288461
Alignment:
Q  266 tgagaaatcctaattgaataccaacggatttcattgcattgnnnnnnnntcataattgtcctaattgaataccacaagatttatttatattttataaaaa 365  Q
    ||||||||| |||||||||||||||||||||  |||| ||         |||| |||||| ||||||||||||||||||||| |||| |||||||||||     
T  2288636 tgagaaatcttaattgaataccaacggattttgttgccttaaaaaaaagtcatgattgtcttaattgaataccacaagatttgtttacattttataaaag 2288537  T
Q  366 gtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
      |||||||||||||||  || |||  ||||||||||||||||| |||||||||||||| ||||||| ||||||||||    
T  2288536 tcttgattgaataccactagacttt--tataataaaaaagtcttttaaaatcccttgaattctcaattcaatacaccc 2288461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 324 - 449
Target Start/End: Complemental strand, 29941064 - 29940939
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  |||| |||   ||||||  |||||||||||||||| || |||| || || ||||||||||| |||||||| ||||    
T  29941064 tcctaattgaataccacaagaatgttttacattccttaaaaatcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctttga 29940965  T
Q  424 aatctcaatccaatacaccctcctta 449  Q
    ||||||||||||||||||||||||||    
T  29940964 aatctcaatccaatacaccctcctta 29940939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 142 - 452
Target Start/End: Original strand, 15284308 - 15284625
Alignment:
Q  142 tgtgagattgttgaatgaacattttgttcatatttttaatcaaaaagt-ctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttg- 239  Q
    |||||||||||||||||| ||| |  |   |||||||||  ||||||| ||||||||||| |||  | |||||||||||| ||||||||| || |||||     
T  15284308 tgtgagattgttgaatgagcatgtcatgtgtatttttaactaaaaagtactcacaaaatccattgtacaaaagaatccattaaaatctataaacttttgt 15284407  T
Q  240 aatatctaaggacattttataagttgtgagaaatcctaattgaataccaacggatttcattgcattgnnnnnnnnt-----cataattgtcctaattgaa 334  Q
    |||| | |  |||| || ||||||  ||||||||| |||||||||||||||||||||  |||| ||               ||| |||||| ||||||||    
T  15284408 aataccaatagacaattcataagtcatgagaaatcttaattgaataccaacggattttgttgccttaaaaaaaaaaaattacatgattgtcttaattgaa 15284507  T
Q  335 taccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatcc 434  Q
    ||||||||||||| |||| |||||||||||   ||| |||||||||||  || |||| ||| ||||||||   || |||||||||||||| ||||||| |    
T  15284508 taccacaagatttgtttacattttataaaagtcttggttgaataccactagacttttttattataaaaaatctttttaaaatcccttgaattctcaattc 15284607  T
Q  435 aatacaccctccttaatt 452  Q
    ||||||||| ||||||||    
T  15284608 aatacaccccccttaatt 15284625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 175 - 449
Target Start/End: Complemental strand, 16155678 - 16155401
Alignment:
Q  175 ttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaatc 274  Q
    ||||||| ||||||||||||| |||| |||||||||| |||| ||| |||||| ||  | | || |||| | |   |||||||| || || | |||||||    
T  16155678 ttttaattaaaaagtctcacacaatcaattccataaatgaattcattaaaatccatttaatattcaataccaagaaacattttaaaatttcttagaaatc 16155579  T
Q  275 ctaattgaataccaacggatttcattgcattgnnnnnnnntcataattgtcctaattgaataccacaagatttatttatattttataaaaagtttgattg 374  Q
      |||||||| |||||||||||| |||| |||        || |||||||| |||||||||||||||| |||||| || |||||||||||  ||||||||    
T  16155578 tcaattgaatgccaacggatttcgttgctttgaaaaaaagtcttaattgtcttaattgaataccacaaaatttatataaattttataaaagttttgattg 16155479  T
Q  375 aataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaa---tctcaatccaatacaccctcctta 449  Q
    ||||||||| || | |  ||| |||| |||||||  |||||||| |||| |   ||| ||| ||||||||||||||||    
T  16155478 aataccacacgactatcttatcataataaagtctattaaaatcctttgatatcttcttaattcaatacaccctcctta 16155401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 320 - 447
Target Start/End: Original strand, 18176430 - 18176557
Alignment:
Q  320 attgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatccc 419  Q
    |||||| | ||| |||||||  |||||||||||| ||||||||||   |||||||||||||||| ||||||| ||| || ||||| |||| |||||||||    
T  18176430 attgtcttgattcaataccatgagatttatttatgttttataaaagtcttgattgaataccacaagatttttttattattaaaaaatcttttaaaatccc 18176529  T
Q  420 ttgaaatctcaatccaatacaccctcct 447  Q
    || |||||| ||| ||||||||||||||    
T  18176530 ttcaaatcttaattcaatacaccctcct 18176557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 320 - 440
Target Start/End: Complemental strand, 2085668 - 2085548
Alignment:
Q  320 attgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatccc 419  Q
    |||||| |||||||||| ||||||||||||| ||||| |||||||  ||||||||||||||  |||| |||| |||  | |||||||||| ||||||| |    
T  2085668 attgtcttaattgaatatcacaagatttattcatattatataaaatttttgattgaatacctgatgacttttttatttttaaaaagtcttttaaaatctc 2085569  T
Q  420 ttgaaatctcaatccaataca 440  Q
     |||||||||||| |||||||    
T  2085568 atgaaatctcaattcaataca 2085548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 183 - 443
Target Start/End: Original strand, 7487953 - 7488213
Alignment:
Q  183 aaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattga 282  Q
    ||||||||||||| |||| ||| || ||| |||||||| ||||||  || | |||| |||| |    ||||||||||||||| | ||||||| |||||||    
T  7487953 aaaaagtctcacacaatccattacacaaatgaatccattaaaatccgtctaattttcaataccacgagacattttataagttcttagaaatcttaattga 7488052  T
Q  283 ataccaacggatttcattgcattgnnnnnnnntcataattgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccac 382  Q
    ||||||||| ||||   ||  ||         || |||||||| | |||||||||||||||||||||||| |||| ||||||   |||||| ||||||||    
T  7488053 ataccaacgaattttgatgtcttaaaaaaaagtcttaattgtcttgattgaataccacaagatttatttagatttcataaaagtcttgattcaataccac 7488152  T
Q  383 atgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    | ||||||  | | ||||||||||||  ||||||   ||||||||||||| ||||||||||    
T  7488153 aagattttcttttcataaaaaagtctattaaaattatttgaaatctcaattcaatacaccc 7488213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 319 - 443
Target Start/End: Original strand, 21736565 - 21736689
Alignment:
Q  319 aattgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcc 418  Q
    ||||||| | ||||||||| |||||||||||||| |||| ||||||   |||||| |||||| || ||||||  | | ||||||||||||  ||||||||    
T  21736565 aattgtcttgattgaatacaacaagatttatttagatttcataaaagtattgattcaatacctcaagattttcttttcataaaaaagtctattaaaatcc 21736664  T
Q  419 cttgaaatctcaatccaatacaccc 443  Q
     ||||||||||||| ||||||||||    
T  21736665 tttgaaatctcaattcaatacaccc 21736689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 297
Target Start/End: Original strand, 14920446 - 14920560
Alignment:
Q  183 aaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattga 282  Q
    ||||||||||||| ||||||||||| ||| |||||||| ||||||| || | |||| |||| | |  |||||||||||||||   |||||||  ||||||    
T  14920446 aaaaagtctcacacaatctattccacaaatgaatccattaaaatctctctaattttcaataccaagagacattttataagttcctagaaatctcaattga 14920545  T
Q  283 ataccaacggatttc 297  Q
    |||||||||||||||    
T  14920546 ataccaacggatttc 14920560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 324 - 437
Target Start/End: Complemental strand, 45547050 - 45546937
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  |||| |||   ||||||  |||||||||||||||| || |||| || || ||||||||||| |||||| | ||||    
T  45547050 tcctaattgaataccacaagaatgttttacattccttaaaaatcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaattctttga 45546951  T
Q  424 aatctcaatccaat 437  Q
    ||||||||||||||    
T  45546950 aatctcaatccaat 45546937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 2373044 - 2372965
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctcct 447  Q
    ||||||||||||| || ||||||||||||| ||||||||||| |||||||| | |||||| |||| ||||||||| ||||    
T  2373044 ttgattgaatacctcaagatttttctataacaaaaaagtcttttaaaatccttcgaaatcccaattcaatacaccatcct 2372965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 368 - 455
Target Start/End: Complemental strand, 9120134 - 9120048
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctccttaatttca 455  Q
    ||||||||||||||||||||||||  || ||||||||||||| |||||||||||  ||||   ||||||||||||| |||||||||||    
T  9120134 ttgattgaataccacatgattttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccc-ccttaatttca 9120048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 183 - 382
Target Start/End: Original strand, 36598291 - 36598490
Alignment:
Q  183 aaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattga 282  Q
    ||||||||||||| |||||||| || | | |||| ||| ||||||| || | |||| |||| | |  |||||||||||||||   ||||||| |||||||    
T  36598291 aaaaagtctcacacaatctatttcacagatgaattcattaaaatctctctaattttcaataccaagagacattttataagttcctagaaatcttaattga 36598390  T
Q  283 ataccaacggatttcattgcattgnnnnnnnntcataattgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccac 382  Q
    ||||||||||||||| ||| |||         || | ||| || | |||||||||||||| ||||||||| |||||||||||   |||||| ||||||||    
T  36598391 ataccaacggatttcgttgtatttaaaaaaagtcttgattatcttgattgaataccacaatatttatttaaattttataaaagtcttgattaaataccac 36598490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 183 - 293
Target Start/End: Original strand, 10441445 - 10441555
Alignment:
Q  183 aaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattga 282  Q
    |||||||||| ||||||| | |||||  ||||||||||||||||||||  | ||||||||| | |  |||| ||||||| |  ||||||||| |||||||    
T  10441445 aaaaagtctcgcaaaatccactccatccaagaatccatcaaaatctatagacttttgaataccaacagacaatttataaatcatgagaaatcttaattga 10441544  T
Q  283 ataccaacgga 293  Q
    |||||||||||    
T  10441545 ataccaacgga 10441555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 329 - 442
Target Start/End: Original strand, 3858156 - 3858269
Alignment:
Q  329 attgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatct 428  Q
    |||||||| ||  ||||||||||||||| |||||||   |||||||||||||| |  | |||| ||| || |||||||||| ||||||||||| ||||||    
T  3858156 attgaatatcatgagatttatttatattctataaaagtcttgattgaataccaaaaaagttttttatcattaaaaagtcttttaaaatcccttaaaatct 3858255  T
Q  429 caatccaatacacc 442  Q
     ||| |||||||||    
T  3858256 taattcaatacacc 3858269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 324 - 441
Target Start/End: Complemental strand, 45485480 - 45485364
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  |||| |||   ||||||  |||||||||||| ||| ||||||| || ||||||||||| || ||||||  |||||    
T  45485480 tcctaattgaataccacaagaatgttttacattccttaaaaatcttgattgaatac-acaagatttttataaaataaaaaagtattttaaaatatcttga 45485382  T
Q  424 aatctcaatccaatacac 441  Q
    ||||| ||||||||||||    
T  45485381 aatctgaatccaatacac 45485364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 324 - 444
Target Start/End: Complemental strand, 27090754 - 27090634
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||| ||| |||||| || | | | ||||  ||||||||||||  || |||||||||||||  ||||| |||| |||||||  | ||    
T  27090754 tcctaattgaataccaccagaattatttctaatcttttaaaatcttgattgaatacttcaagatttttctataaccaaaaaatcttttaaaatctttgga 27090655  T
Q  424 aatctcaatccaatacaccct 444  Q
    |||| ||||||||||||||||    
T  27090654 aatcccaatccaatacaccct 27090634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 288
Target Start/End: Original strand, 24935961 - 24936066
Alignment:
Q  183 aaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattga 282  Q
    ||||||||||||||||||||||  || || |||||||| |||||||||  ||||||||||| | ||||| | ||| ||||||| || ||||| | ||| |    
T  24935961 aaaaagtctcacaaaatctattatattaaggaatccattaaaatctatatatttttgaataacaaaggataatttttaagttgagaaaaatcttgattta 24936060  T
Q  283 atacca 288  Q
    ||||||    
T  24936061 atacca 24936066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 368 - 443
Target Start/End: Complemental strand, 16269657 - 16269582
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||||| || ||||  |||||||||||||||| |||||||||||  ||||   |||||||||||||    
T  16269657 ttgattgaataccacaagactttttcataataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccc 16269582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 329 - 443
Target Start/End: Original strand, 39698567 - 39698681
Alignment:
Q  329 attgaataccacaagatttatttatattttataaaaagt-ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatc 427  Q
    |||||||||| |||||||  |||||||| || |||| || |||||||||||||||| |||| || |||| | ||||||| || ||||||| |||||||||    
T  39698567 attgaatacctcaagattcttttatattcta-aaaatgtcttgattgaataccacaagattgttttatagttaaaaagttttttaaaatctcttgaaatc 39698665  T
Q  428 tcaatccaatacaccc 443  Q
      |||| |||||||||    
T  39698666 ctaatcgaatacaccc 39698681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 424
Target Start/End: Original strand, 35172598 - 35172704
Alignment:
Q  318 taattgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatc 417  Q
    |||||||| | |||||||||||||||||||||||| |||  ||||||   |||||| |||||| || ||||||  | | ||||||||||||  |||||||    
T  35172598 taattgtcttgattgaataccacaagatttatttagattccataaaagtcttgattcaatacctcaagattttcttttcataaaaaagtctattaaaatc 35172697  T
Q  418 ccttgaa 424  Q
    | |||||    
T  35172698 ctttgaa 35172704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 368 - 453
Target Start/End: Complemental strand, 378945 - 378860
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctccttaattt 453  Q
    |||||||||||||||| || ||||  ||||| |||||||||| |||||||||||  ||||   |||||||||| || |||||||||    
T  378945 ttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccttataatcatgatccaatacatcccccttaattt 378860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 2085806 - 2085725
Alignment:
Q  183 aaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagtt 264  Q
    |||||||||||||||||| ||||| ||||| |||| || ||||||||   | ||||||||||| |  |||||||||||||||    
T  2085806 aaaaagtctcacaaaatccattccgtaaaataatctattaaaatctacatacttttgaatatcaagagacattttataagtt 2085725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 16146945 - 16146884
Alignment:
Q  318 taattgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaatac 379  Q
    |||||||| |||||||||||||||| |||||| || |||||||||||   ||||||||||||    
T  16146945 taattgtcttaattgaataccacaaaatttatataaattttataaaagtcttgattgaatac 16146884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 183 - 296
Target Start/End: Original strand, 21736428 - 21736541
Alignment:
Q  183 aaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattga 282  Q
    ||||||||||||| |||| ||| || ||| |||||||| ||||||  || | |||| |||| |    |||||||||||| || | ||||||| |||||||    
T  21736428 aaaaagtctcacacaatccattacacaaatgaatccattaaaatccgtctaattttcaataccacgagacattttataaattcttagaaatcttaattga 21736527  T
Q  283 ataccaacggattt 296  Q
    ||||||||||||||    
T  21736528 ataccaacggattt 21736541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 368 - 449
Target Start/End: Complemental strand, 24776321 - 24776240
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctcctta 449  Q
    |||||||||||||||| || ||||  || ||||||||||||| |||||||||||  ||||   ||||||||||||| |||||    
T  24776321 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccccctta 24776240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 183 - 288
Target Start/End: Original strand, 25684645 - 25684750
Alignment:
Q  183 aaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattga 282  Q
    ||||||||||||||||||||||  || || |||| ||| |||||||||  ||||||||||| | ||||| | ||| ||||||| || ||||| | ||| |    
T  25684645 aaaaagtctcacaaaatctattatattaaggaattcattaaaatctatatatttttgaataacaaaggataatttttaagttgagaaaaatcttgattta 25684744  T
Q  283 atacca 288  Q
    ||||||    
T  25684745 atacca 25684750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 443
Target Start/End: Original strand, 6289539 - 6289583
Alignment:
Q  399 aaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||| || |||||||| ||||||||||||||||||||||||    
T  6289539 aaaaaagttttttaaaatcctttgaaatctcaatccaatacaccc 6289583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 443
Target Start/End: Complemental strand, 11534910 - 11534835
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||  | || |||| || || ||||||||||| |||||||| |||||||||||||  |||||||||    
T  11534910 ttgattgaatacctaaagacttttttaaaacaaaaaagtcttttaaaatcctttgaaatctcaattgaatacaccc 11534835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 443
Target Start/End: Original strand, 20157722 - 20157841
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  |||| |||   |||||   |||||||||||||  | || || | || || ||||||||||| |||||||| ||||    
T  20157722 tcctaattgaataccacaagaatgttttagattccttaaaagtcttgattgaatacctaaagacttctttaaaacaaaaaagtcttttaaaatcctttga 20157821  T
Q  424 aatctcaatccaatacaccc 443  Q
    |||||||||  |||||||||    
T  20157822 aatctcaattgaatacaccc 20157841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 443
Target Start/End: Original strand, 22552007 - 22552082
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||||| || ||||  || ||||||||||||| |||||||||||  ||||   |||||||||||||    
T  22552007 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccc 22552082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 418
Target Start/End: Original strand, 26601443 - 26601494
Alignment:
Q  367 tttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcc 418  Q
    ||||||||||||||||| || ||||  |||||||||||||||| ||||||||    
T  26601443 tttgattgaataccacaagactttttaataataaaaaagtcttttaaaatcc 26601494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 427
Target Start/End: Complemental strand, 32125216 - 32125157
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatc 427  Q
    |||||||||||||||| || ||||  || ||||||||||||| ||||||||||| |||||    
T  32125216 ttgattgaataccacaagactttttcattataaaaaagtcttttaaaatcccttaaaatc 32125157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 43078641 - 43078562
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctcct 447  Q
    |||||||||||||||| || ||||  ||||| |||||||||| ||||||||| |  ||||  ||||||||||| ||||||    
T  43078641 ttgattgaataccacaagactttttcataatcaaaaagtcttttaaaatcccatagaatcctaatccaatacatcctcct 43078562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 442
Target Start/End: Complemental strand, 44765742 - 44765667
Alignment:
Q  367 tttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacacc 442  Q
    ||||||||||||||||| || ||||  || ||||||||||||| |||||||||||  ||||   ||||||||||||    
T  44765742 tttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 44765667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 450
Target Start/End: Complemental strand, 3463637 - 3463555
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctccttaa 450  Q
    |||||||||||||||| |||||||  ||||| |||||||||| ||||||| | |  ||||  ||||||||||| || ||||||    
T  3463637 ttgattgaataccacaagattttttcataattaaaaagtcttttaaaatctcatagaatcataatccaatacatcccccttaa 3463555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 442
Target Start/End: Original strand, 14198820 - 14198894
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacacc 442  Q
    |||||||||||||||| || ||||  || ||||||||||||| |||||||||||  ||||   ||||||||||||    
T  14198820 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 14198894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 443
Target Start/End: Original strand, 14920619 - 14920665
Alignment:
Q  397 ataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    ||||||||||||| |||||||| || ||||| |||||||||||||||    
T  14920619 ataaaaaagtcttttaaaatcctttaaaatcacaatccaatacaccc 14920665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 418
Target Start/End: Complemental strand, 24193668 - 24193574
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcc 418  Q
    ||||||||||||||||||| | |  ||||||||   ||||||  ||||||||||||| || || |||| || || ||||||||||| ||||||||    
T  24193668 tcctaattgaataccacaaaaatgttttatattccttaaaaatcttgattgaataccccaagacttttttaaaacaaaaaagtcttttaaaatcc 24193574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 423 - 453
Target Start/End: Complemental strand, 24935312 - 24935282
Alignment:
Q  423 aaatctcaatccaatacaccctccttaattt 453  Q
    |||||||||||||||||||||||||||||||    
T  24935312 aaatctcaatccaatacaccctccttaattt 24935282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 423 - 453
Target Start/End: Complemental strand, 25684005 - 25683975
Alignment:
Q  423 aaatctcaatccaatacaccctccttaattt 453  Q
    |||||||||||||||||||||||||||||||    
T  25684005 aaatctcaatccaatacaccctccttaattt 25683975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 449
Target Start/End: Complemental strand, 26788750 - 26788669
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctcctta 449  Q
    |||||||||||||||| || ||||  ||||| |||||||||| ||||||||| |  ||||  ||||||||||| || |||||    
T  26788750 ttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaatacatccccctta 26788669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 35172529 - 35172574
Alignment:
Q  251 acattttataagttgtgagaaatcctaattgaataccaacggattt 296  Q
    |||||||||||||| | | ||||| |||||||||||||||||||||    
T  35172529 acattttataagttcttataaatcttaattgaataccaacggattt 35172574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 443
Target Start/End: Complemental strand, 1789409 - 1789333
Alignment:
Q  367 tttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    ||||||||||||||||| || |||| ||| |||||||| |||| ||||||| |||  ||||   |||||||||||||    
T  1789409 tttgattgaataccacaagacttttttatgataaaaaaatcttttaaaatctcttagaatcatgatccaatacaccc 1789333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 16147092 - 16147040
Alignment:
Q  175 ttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatc 227  Q
    ||||||| ||||||||||||| |||| |||||||||| ||||| || ||||||    
T  16147092 ttttaattaaaaagtctcacacaatccattccataaatgaatctattaaaatc 16147040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 263
Target Start/End: Original strand, 17330452 - 17330504
Alignment:
Q  211 aagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagt 263  Q
    ||||||||||||||||||||  | ||||||||| | || ||||||||||||||    
T  17330452 aagaatccatcaaaatctatagacttttgaataccaaaagacattttataagt 17330504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 443
Target Start/End: Complemental strand, 19144991 - 19144915
Alignment:
Q  367 tttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    ||||||||||||||||| || |||| ||| |||||||| | || |||||||||||  ||||  | ||||||||||||    
T  19144991 tttgattgaataccacaagacttttttatgataaaaaaatattttaaaatcccttagaatcatattccaatacaccc 19144915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 419
Target Start/End: Original strand, 28740526 - 28740578
Alignment:
Q  367 tttgattgaataccacatgatttttctataataaaaaagtcttctaaaatccc 419  Q
    ||||||||||||||||| || ||||  ||||| |||||||||| |||||||||    
T  28740526 tttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 28740578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 28844521 - 28844449
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    |||||||||||||||| || ||||  ||||| |||||||||| ||||||||| |  ||||  |||||||||||    
T  28844521 ttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 28844449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 253; Significance: 1e-140; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 57 - 451
Target Start/End: Complemental strand, 53594471 - 53594078
Alignment:
Q  57 atgaattcacaatatctggaactagttggaaaaatgaatctcgttggacagcaaggaaaagaaaattgcgagtctcacaaatttgtgtgagattgttgaa 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||  ||||    
T  53594471 atgaattcacaatatctggaactagttggaaaaatgaatctcgttggacagcaaggaaaagaaaattgtgagtctcacaaatttgtctgagatt--tgaa 53594374  T
Q  157 tgaacattttgttcatatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattt 256  Q
    ||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||| | || |||||||    
T  53594373 tgagcattttgttcacatttttaatcaaaaagtctcacaaaatccattccataaaaaaatccatcaaaatctatcaattttttaataccgaaagacattt 53594274  T
Q  257 tataagttgtgagaaatcctaattgaataccaacggatttcattgcattg-nnnnnnnntcataattgtcctaattgaataccacaagatttatttatat 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||         |||  |||||  |||||||||||||||||||||||||||||    
T  53594273 tataagttgtgagaaatcctaattgaataccaacggatttcattgcattgaaaaaaaaatcacgattgttttaattgaataccacaagatttatttatat 53594174  T
Q  356 tttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctccttaat 451  Q
    |||||||||  ||||||||||| ||||| || |||||||||||||||||||||| |||||| | |||||||||||||  |||| ||||||||||||    
T  53594173 tttataaaatttttgattgaatgccacaagacttttctataataaaaaagtcttttaaaattcattgaaatctcaatttaatataccctccttaat 53594078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 127 - 449
Target Start/End: Original strand, 28100349 - 28100673
Alignment:
Q  127 agtctcacaaatttgtgtgagattgttgaatgaacattttgttcatatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaat 226  Q
    ||||||||| |||| ||||||||||||||||||  | | |||||| ||||||||  |||||||||| ||||||| |||||||||||||||||||||||||    
T  28100349 agtctcacacatttttgtgagattgttgaatgagtagtgtgttcacatttttaactaaaaagtctctcaaaatccattccataaaagaatccatcaaaat 28100448  T
Q  227 ctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattgaataccaacggatttcattgcattg-nnnnnnnntcataattgtc 325  Q
    |||| ||||||||||||   || ||||||||||||||||||||||||| |||||||||| ||||||||||| || |||||         || | ||||||    
T  28100449 ctattaatttttgaatactaaaagacattttataagttgtgagaaatcttaattgaatatcaacggatttcgttacattgtaaaaaaagtcttgattgtc 28100548  T
Q  326 ctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataat-aaaaaagtcttctaaaatcccttgaa 424  Q
     | ||||||||||| ||||||||||||||||||||||||   |||||||||||||||| || |||| |||||| ||||||||||| ||||| ||||||||    
T  28100549 ttgattgaataccataagatttatttatattttataaaagtcttgattgaataccacaagacttttttataataaaaaaagtcttttaaaaccccttgaa 28100648  T
Q  425 atctcaatccaatacaccctcctta 449  Q
    ||| ||||||||||||||| |||||    
T  28100649 atcccaatccaatacacccccctta 28100673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 95 - 382
Target Start/End: Original strand, 37370620 - 37370910
Alignment:
Q  95 tctcgttggacagcaaggaaaagaaaattgcg--agtctcacaaatttgtgtgagattgttgaatgaacattttgttcatatttttaatcaaaaagtctc 192  Q
    |||||||||||| || |||||||||||||| |  ||||| |||||||| ||||| ||||||||||||  |||||||||| ||||||||  | ||||||||    
T  37370620 tctcgttggacatcacggaaaagaaaattgtgggagtcttacaaatttttgtgaaattgttgaatgagtattttgttcacatttttaactataaagtctc 37370719  T
Q  193 acaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattgaataccaacgg 292  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||| ||||      
T  37370720 acaaaatccattccataaaagaatccattaaaatctatcaatttttgaataccgaaggacattttataagttgtgagaaatcttaattgaatagcaacaa 37370819  T
Q  293 atttcattgca-ttgnnnnnnnntcataattgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccac 382  Q
    ||||| ||| | ||         |||| |||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  37370820 atttcgttgtattttaaaaaaagtcatgattgtcttaattgaataccacaagatttatttatattttataaaagttttgattgaataccac 37370910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 142 - 443
Target Start/End: Complemental strand, 41762280 - 41761979
Alignment:
Q  142 tgtgagattgttgaatgaacattttgttcatatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaa 241  Q
    |||||||||||||||| |  ||| |||||| ||||||||  ||||| | |||||||||| | ||||||||||||| |||||| ||| || || |||| ||    
T  41762280 tgtgagattgttgaataagtattgtgttcacatttttaactaaaaaatttcacaaaatccactccataaaagaattcatcaatatccataaaattttaaa 41762181  T
Q  242 tatctaaggacattttataagttgtgagaaatcctaattgaataccaacggatttcattgcattgnnnnnnnntcataattgtcctaattgaataccaca 341  Q
    || | || ||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||         || | |||||| || ||||||||||||    
T  41762180 taccaaaagacattttataagttgtgagaaatcctaattgaataccaac-gatttcgttgtattcaaaaaaagtcttgattgtcttagttgaataccaca 41762082  T
Q  342 agatttatttatattttataaaaagt-ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    ||| |||||||||||||||||||||| |||||| ||||||||| || |||| |||||| | |||||||| |||||||| || ||||||||||||||||||    
T  41762081 agacttatttatattttataaaaagtcttgattcaataccacaagacttttttataatcacaaagtcttttaaaatcctttaaaatctcaatccaataca 41761982  T
Q  441 ccc 443  Q
    |||    
T  41761981 ccc 41761979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 171 - 449
Target Start/End: Complemental strand, 38231045 - 38230766
Alignment:
Q  171 atatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgaga 270  Q
    ||||||||||  |||||||||||||||||| |||||||  ||||||||||||||||||||  | ||||||||| | | ||||| || ||||||  |||||    
T  38231045 atatttttaactaaaaagtctcacaaaatccattccatccaagaatccatcaaaatctatagacttttgaataccaatggacaattcataagtcatgaga 38230946  T
Q  271 aatcctaattgaataccaacggatttcattgcattgnnnnnnnn-tcataattgtcctaattgaataccacaagatttatttatattttataaaaagttt 369  Q
    ||||  ||||||||||||||||||||  |||| ||          |||| |||||| | ||||||||||||||||||| |||| |||||||||||   ||    
T  38230945 aatctcaattgaataccaacggattttgttgccttaaaaaaaaagtcatgattgtcttgattgaataccacaagatttgtttaaattttataaaagtctt 38230846  T
Q  370 gattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctcctta 449  Q
    |||||||||||||  || ||||  ||  |||||||||||| ||||||||||||||||| |||| |||||||||| |||||    
T  38230845 gattgaataccactagactttttcattctaaaaaagtcttttaaaatcccttgaaatcccaattcaatacacccccctta 38230766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 183 - 440
Target Start/End: Original strand, 28846925 - 28847183
Alignment:
Q  183 aaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattga 282  Q
    ||||||||| |||||||| || | ||  || |||||||||||||||||  ||||||||||| | | ||||| || ||||||   ||||||||  ||||||    
T  28846925 aaaaagtcttacaaaatccatccaatccaaaaatccatcaaaatctatagatttttgaataccaatggacaattaataagtcaagagaaatctcaattga 28847024  T
Q  283 ataccaacggatttcattgcattgnnnnnnnn-tcataattgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaatacca 381  Q
    ||||| ||||||||||| ||  ||         |||| |||||| |||||||||||||||||||||||||  |||| ||||||  |||||||||||||||    
T  28847025 ataccgacggatttcatggccctgaacaaaaagtcatgattgtcttaattgaataccacaagatttattttcatttcataaaagttttgattgaatacca 28847124  T
Q  382 catgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    |  || |||| ||| ||||||||||||| |||||||| || ||||||||||||||||||    
T  28847125 ctagacttttttattataaaaaagtcttttaaaatcctttaaaatctcaatccaataca 28847183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 147 - 443
Target Start/End: Complemental strand, 16019198 - 16018903
Alignment:
Q  147 gattgttgaatgaacattttgttcatatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatct 246  Q
    |||||||||||||  |||||||| ||||||||||  ||||||||| | |||||  | || || ||| ||| ||| |||||||||  || ||||||||||     
T  16019198 gattgttgaatgagtattttgtttatatttttaactaaaaagtcttataaaattcactcgatcaaataattcattaaaatctatgtatatttgaatatca 16019099  T
Q  247 aaggacattttataagttgtgagaaatcctaattgaataccaacggatttcattgcattg-nnnnnnnntcataattgtcctaattgaataccacaagat 345  Q
    | |||||||||||||||  ||| |||||  ||||||||||||||| ||||| ||| ||||         |||| |||||| ||||| ||||  |||| ||    
T  16019098 atggacattttataagtaatgaaaaatctcaattgaataccaacgaatttcgttgtattgaaaaaagaatcatgattgtcttaattaaatattacaaaat 16018999  T
Q  346 ttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||||||||   |||||||| |||| ||  | |||| |||||| |||||||||| ||||||| | ||||| || ||||||||||||||    
T  16018998 ttatttatattttataaaa--gttgattgattacctcaaaacttttttataattaaaaagtcttttaaaatctcgtgaaacctgaatccaatacaccc 16018903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 329 - 450
Target Start/End: Complemental strand, 44646835 - 44646714
Alignment:
Q  329 attgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatct 428  Q
    ||||||||||| ||||||||||||| ||||||||||   |||||||||||||||| ||||||| ||| || |||||||||| ||||||| ||||||||||    
T  44646835 attgaataccataagatttatttatgttttataaaagtcttgattgaataccacaagatttttttatcattaaaaagtcttttaaaatctcttgaaatct 44646736  T
Q  429 caatccaatacaccctccttaa 450  Q
      || |||||||||| ||||||    
T  44646735 tgattcaatacaccccccttaa 44646714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 324 - 443
Target Start/End: Original strand, 8583970 - 8584089
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  |||| |||   ||||||  |||||||||||||||| || |||| || |||||||||||||| |||||||| ||||    
T  8583970 tcctaattgaataccacaagaatgttttacattccttaaaaatcttgattgaataccacaagacttttataaaataaaaaagtcttttaaaatcctttga 8584069  T
Q  424 aatctcaatccaatacaccc 443  Q
    ||||||||||||||||||||    
T  8584070 aatctcaatccaatacaccc 8584089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 320 - 441
Target Start/End: Complemental strand, 53272032 - 53271911
Alignment:
Q  320 attgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatccc 419  Q
    |||||| | |||||||||||||| ||||||||||||| |||||||   ||||||||||| |||| || |||| |||  |||||||||||| |||||||||    
T  53272032 attgtcttgattgaataccacaatatttatttatattatataaaagtcttgattgaatatcacaagacttttttattttaaaaaagtcttttaaaatccc 53271933  T
Q  420 ttgaaatctcaatccaatacac 441  Q
     ||||||| |||| ||||||||    
T  53271932 atgaaatcccaattcaatacac 53271911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 324 - 443
Target Start/End: Complemental strand, 44929996 - 44929877
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  ||||||||   ||||||  |||||||||||||||| || |||| || || |||||||| || |||||||  || |    
T  44929996 tcctaattgaataccacaagaatattttatattccttaaaaatcttgattgaataccacaagacttttataaaacaaaaaagtattttaaaatcttttaa 44929897  T
Q  424 aatctcaatccaatacaccc 443  Q
    ||||||||||||||||||||    
T  44929896 aatctcaatccaatacaccc 44929877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 381
Target Start/End: Complemental strand, 20539057 - 20538993
Alignment:
Q  318 taattgtcctaattgaataccacaagatttatttatattttataaaaagt-ttgattgaatacca 381  Q
    |||||||| | |||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  20539057 taattgtcttgattgaataccacaagatttatttatattttgtaaaaagtcttgattgaatacca 20538993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 320 - 443
Target Start/End: Complemental strand, 16653377 - 16653254
Alignment:
Q  320 attgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatccc 419  Q
    |||||| ||||||||||| |||| |||||| ||||||||||||||   |||||||||||||||| || |||| | |  | |||| ||||| |||||| ||    
T  16653377 attgtcttaattgaatacaacaaaatttatgtatattttataaaattcttgattgaataccacaagacttttttttttttaaaatgtcttttaaaattcc 16653278  T
Q  420 ttgaaatctcaatccaatacaccc 443  Q
     ||||||| |||| ||||||||||    
T  16653277 atgaaatcccaattcaatacaccc 16653254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 453
Target Start/End: Original strand, 24131214 - 24131299
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctccttaattt 453  Q
    |||||||||||||||| || ||||  || ||||||||||||| |||||||||||  ||||   |||||||||||||||||||||||    
T  24131214 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccctccttaattt 24131299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 324 - 443
Target Start/End: Complemental strand, 8880563 - 8880444
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattg-aataccacatgatttttctataataaaaaagtcttctaaaatcccttg 422  Q
    ||||||||||||||||||||| |  |||| |||   ||||||  || |||| ||||||||| ||||||| || || ||||||||||| |||||||| |||    
T  8880563 tcctaattgaataccacaagaatgttttacattccttaaaaatcttaattggaataccacaagatttttataaaacaaaaaagtcttttaaaatcctttg 8880464  T
Q  423 aaatctcaatccaatacaccc 443  Q
    |||||| ||||||||||||||    
T  8880463 aaatct-aatccaatacaccc 8880444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 324 - 443
Target Start/End: Complemental strand, 25935906 - 25935786
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaa-gtcttctaaaatcccttg 422  Q
    ||||||||||||| ||||||| |  |||| |||   ||||||  |||||||||||||| |  | |||| || ||||||||| ||||| |||||||| |||    
T  25935906 tcctaattgaatatcacaagaatgttttacattccttaaaaatcttgattgaataccataaaacttttataaaataaaaaaagtcttttaaaatcctttg 25935807  T
Q  423 aaatctcaatccaatacaccc 443  Q
    |||||||||||||||||||||    
T  25935806 aaatctcaatccaatacaccc 25935786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 320 - 443
Target Start/End: Complemental strand, 27529202 - 27529085
Alignment:
Q  320 attgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatccc 419  Q
    |||||| |||||||||||||||||||||  |||||||| ||||||    ||||||||||| ||| ||||||  ||| || ||||||      |||||| |    
T  27529202 attgtcttaattgaataccacaagattttcttatatttcataaaagtcatgattgaatacaacacgattttattatcatcaaaaag------aaaatctc 27529109  T
Q  420 ttgaaatctcaatccaatacaccc 443  Q
    ||||||||||||||||||||||||    
T  27529108 ttgaaatctcaatccaatacaccc 27529085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 371 - 443
Target Start/End: Original strand, 42218416 - 42218488
Alignment:
Q  371 attgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    ||||||||||||| || |||| || || |||||||| || |||||||| ||||||||||||||||||||||||    
T  42218416 attgaataccacaagacttttataaaacaaaaaagttttttaaaatcctttgaaatctcaatccaatacaccc 42218488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 324 - 440
Target Start/End: Complemental strand, 52109525 - 52109409
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  |||| |||   ||||||  |||||||||||||||| ||||||| || || ||||||||||| |||||| | || |    
T  52109525 tcctaattgaataccacaagaatgttttacattccttaaaaatcttgattgaataccacaagatttttataaaacaaaaaagtcttttaaaatactttaa 52109426  T
Q  424 aatctcaatccaataca 440  Q
    ||||| |||| ||||||    
T  52109425 aatctaaatctaataca 52109409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 329 - 443
Target Start/End: Complemental strand, 56397557 - 56397443
Alignment:
Q  329 attgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatct 428  Q
    |||||||||||||| ||||||||| |||  ||||||   |||| | |||||| || ||||||  | | ||||||||||||  |||||||| |||||||||    
T  56397557 attgaataccacaaaatttatttagattccataaaagtcttgaatcaatacctcaagattttcttttcataaaaaagtctattaaaatcctttgaaatct 56397458  T
Q  429 caatccaatacaccc 443  Q
    |||| ||||||||||    
T  56397457 caattcaatacaccc 56397443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 364
Target Start/End: Original strand, 1848495 - 1848532
Alignment:
Q  327 taattgaataccacaagatttatttatattttataaaa 364  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1848495 taattgaataccacaagatttatttatattttataaaa 1848532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 448
Target Start/End: Original strand, 33450149 - 33450226
Alignment:
Q  371 attgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctcctt 448  Q
    ||||||||| ||| || |||| || ||  |||||||||| |||||||| |||||||||||||||||||||||| ||||    
T  33450149 attgaatactacacgacttttttaaaacgaaaaagtcttttaaaatccattgaaatctcaatccaatacacccccctt 33450226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 443
Target Start/End: Complemental strand, 35261659 - 35261615
Alignment:
Q  399 aaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||    
T  35261659 aaaaaagtcttttaaaatcctttgaaatctcaatccaatacaccc 35261615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 443
Target Start/End: Original strand, 3435922 - 3436036
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    |||||||||||||||||||||||  |||| |||   |||||   |||||||||||||||     |||| || || ||||||||||| |||||||| || |    
T  3435922 tcctaattgaataccacaagattgttttacattccttaaaattcttgattgaataccac-----ttttataaaacaaaaaagtcttttaaaatcctttaa 3436016  T
Q  424 aatctcaatccaatacaccc 443  Q
    ||||||||||||||| ||||    
T  3436017 aatctcaatccaataaaccc 3436036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 28541662 - 28541583
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctcct 447  Q
    |||||||||||||||| || ||||  |||||||||| ||||| |||||||||||  ||||   |||||||||||||||||    
T  28541662 ttgattgaataccacaagactttttcataataaaaatgtcttttaaaatcccttagaatcatgatccaatacaccctcct 28541583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 329 - 443
Target Start/End: Complemental strand, 37915788 - 37915674
Alignment:
Q  329 attgaataccacaagatttatttatattttataaaaagt-ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatc 427  Q
    |||||||||||||||| || ||| ||  ||| ||||||| |||||||||||||||| || ||||  ||||| |||||||||| ||||||||| |  ||||    
T  37915788 attgaataccacaagactttttt-taagttacaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatc 37915690  T
Q  428 tcaatccaatacaccc 443  Q
      ||||||||||||||    
T  37915689 ataatccaatacaccc 37915674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 296
Target Start/End: Complemental strand, 42315093 - 42315047
Alignment:
Q  250 gacattttataagttgtgagaaatcctaattgaataccaacggattt 296  Q
    ||||||||||||||| | ||||||| |||||||||||||||||||||    
T  42315093 gacattttataagtttttagaaatcttaattgaataccaacggattt 42315047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 368 - 449
Target Start/End: Complemental strand, 23987220 - 23987139
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctcctta 449  Q
    |||||||||||||||| || ||||  ||||| |||||||||| ||||||||| | |||||  ||||||||||| || |||||    
T  23987220 ttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatccaatacatccccctta 23987139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 417
Target Start/End: Original strand, 37828605 - 37828693
Alignment:
Q  329 attgaataccacaagatttatttatattttataaaaagt-ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatc 417  Q
    ||||||||||||||||||| ||| || |||  ||||||| |||||||||||||||| || ||||  ||||| |||||||||| |||||||    
T  37828605 attgaataccacaagattttttt-taatttgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 37828693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 142 - 263
Target Start/End: Complemental strand, 53272211 - 53272090
Alignment:
Q  142 tgtgagattgttgaatgaacattttgttcatatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaa 241  Q
    |||||||||||||||| | ||| || |   ||||||||   |||||||||||||||||| | ||||||||||||||||| ||||| | |  | |||||||    
T  53272211 tgtgagattgttgaataagcatgttatgtgtatttttagctaaaaagtctcacaaaatccactccataaaagaatccattaaaatatgtatacttttgaa 53272112  T
Q  242 tatctaaggacattttataagt 263  Q
    || | |  ||||||||||||||    
T  53272111 taccaatagacattttataagt 53272090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 183 - 296
Target Start/End: Complemental strand, 56397704 - 56397591
Alignment:
Q  183 aaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattga 282  Q
    ||||||||||||| |||| ||| || ||| |||||||| ||||||  || | |||| |||| |    ||||| ||||||||| | ||||||| |||||||    
T  56397704 aaaaagtctcacacaatccattacacaaatgaatccattaaaatccgtctaattttcaataccacgagacatgttataagttcttagaaatcttaattga 56397605  T
Q  283 ataccaacggattt 296  Q
    ||||||||||||||    
T  56397604 ataccaacggattt 56397591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 444
Target Start/End: Original strand, 7250015 - 7250091
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccct 444  Q
    |||||||||||||||| |||||||  || ||||||||||||| |||||| ||||  ||||   ||||||||||||||    
T  7250015 ttgattgaataccacaagattttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccct 7250091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 447
Target Start/End: Complemental strand, 543989 - 543861
Alignment:
Q  315 tcataattgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaa 414  Q
    |||| |||||| | |||||||||||||  |||| ||||||||  ||||||| ||| |||||||| |||| || |||| |||  | |||||||||| ||||    
T  543989 tcatgattgtcttgattgaataccacataatttctttatattcaataaaaaatttaattgaatatcacaagacttttttatttttaaaaagtcttttaaa 543890  T
Q  415 atcccttgaaatctcaatccaatacaccctcct 447  Q
    |    ||  ||||||||| ||||||||||||||    
T  543889 a----ttctaatctcaattcaatacaccctcct 543861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 443
Target Start/End: Complemental strand, 7820215 - 7820096
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||| | |  |||| |||   | |||| |||||| ||||||||||  | |||| || || ||| ||||||| |||||||  ||||    
T  7820215 tcctaattgaataccacaaaaatgttttagattccttgaaaattttgatggaataccacaaaacttttataaaacaaataagtcttttaaaatcatttga 7820116  T
Q  424 aatctcaatccaatacaccc 443  Q
    ||||||||||||||| ||||    
T  7820115 aatctcaatccaatataccc 7820096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 455
Target Start/End: Complemental strand, 20021308 - 20021221
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctccttaatttca 455  Q
    |||||| ||||||||| || ||||  ||||| |||||||||| ||||||||||| ||||   ||||||||||| || |||||| ||||    
T  20021308 ttgattaaataccacaagactttttcataattaaaaagtcttttaaaatcccttaaaattataatccaatacatcccccttaagttca 20021221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 443
Target Start/End: Original strand, 39479599 - 39479674
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||||| || |||| ||| ||||||||||||| ||||||  ||| |||||   |||||||||||||    
T  39479599 ttgattgaataccacaagacttttttatgataaaaaagtcttttaaaatttcttaaaatcatgatccaatacaccc 39479674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 443
Target Start/End: Complemental strand, 45332785 - 45332666
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  |||| |||   |||||  ||||||||||||||  | ||  ||| || || ||||||||||| |||||| | ||||    
T  45332785 tcctaattgaataccacaagaatgttttagattccttaaaagttttgattgaatacctaaagacatttttaaaacaaaaaagtcttttaaaattctttga 45332686  T
Q  424 aatctcaatccaatacaccc 443  Q
    |||||||||  |||||||||    
T  45332685 aatctcaattgaatacaccc 45332666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 443
Target Start/End: Complemental strand, 54509789 - 54509714
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||  | || |||| || || ||||||||||| |||||||| |||||||||||||  |||||||||    
T  54509789 ttgattgaatacctaaagacttttttaaaacaaaaaagtcttttaaaatcctttgaaatctcaattgaatacaccc 54509714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 55302807 - 55302728
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctcct 447  Q
    |||||||||||||| |  | ||||  || ||||||||||||||||||||||||| |||||   || ||||||||||||||    
T  55302807 ttgattgaataccataacactttttcattataaaaaagtcttctaaaatcccttaaaatcatgattcaatacaccctcct 55302728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 301
Target Start/End: Complemental strand, 5117233 - 5117104
Alignment:
Q  173 atttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatctat-caatttttgaatatctaag-gacattttataagttgtgaga 270  Q
    ||||||||  |||||||||||||||||| |||| |  || ||||||||  |||||||| || ||||| |||| ||||| |||| ||| ||||||| || |    
T  5117233 atttttaactaaaaagtctcacaaaatccattctactaaggaatccattgaaatctatacatttttttaata-ctaagagacaatttttaagttgcgaaa 5117135  T
Q  271 aatcctaattgaataccaacggatttcattg 301  Q
    |||| | || |||||||| ||||||||||||    
T  5117134 aatcttgatggaataccaccggatttcattg 5117104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 449
Target Start/End: Original strand, 41881325 - 41881407
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaa-aagtcttctaaaatcccttgaaatctcaatccaatacaccctcctta 449  Q
    |||||||||||||||| || ||||  || |||||| ||||||| ||||||||||| |||||   ||||||||||||| |||||    
T  41881325 ttgattgaataccacaagactttttcatgataaaaaaagtcttttaaaatcccttaaaatcatgatccaatacacccccctta 41881407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 442
Target Start/End: Complemental strand, 47685219 - 47685145
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacacc 442  Q
    |||||||||||||  | ||||||| || || ||||||||||| |||||||  |||||||||||||  ||||||||    
T  47685219 ttgattgaatacctaaagatttttttaaaacaaaaaagtcttttaaaatcttttgaaatctcaattgaatacacc 47685145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 449
Target Start/End: Complemental strand, 25446057 - 25445977
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctcctta 449  Q
    |||||||||||  ||| || ||||  || ||||||||||||| ||||||||||| |||||   |||||||||||||||||||    
T  25446057 ttgattgaataatacaagactttttcatgataaaaaagtcttttaaaatcccttaaaatc-atatccaatacaccctcctta 25445977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 421
Target Start/End: Original strand, 32951078 - 32951131
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatccctt 421  Q
    |||||||||||||||| || ||||  || ||||||||||||| |||||||||||    
T  32951078 ttgattgaataccacaagactttttcattataaaaaagtcttttaaaatccctt 32951131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 421
Target Start/End: Original strand, 34228824 - 34228877
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatccctt 421  Q
    |||||||||||||||| || ||||  || ||||||||||||| |||||||||||    
T  34228824 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatccctt 34228877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 5441368 - 5441296
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    |||||||||||||||| || ||||  ||||| |||||||||| ||||||||| |  ||||  |||||||||||    
T  5441368 ttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 5441296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 452
Target Start/End: Original strand, 25504881 - 25504964
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctccttaatt 452  Q
    |||||||||||||||| || ||||  || |||||||||| || |||||||| ||  || ||  ||||||||||||||||||||||    
T  25504881 ttgattgaataccacaagactttttcatgataaaaaagtattttaaaatccattagaacct-gatccaatacaccctccttaatt 25504964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 27768020 - 27767948
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    |||||||||||||||| || ||||  ||||| |||||||||| ||||||||| |  ||||  |||||||||||    
T  27768020 ttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 27767948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 440
Target Start/End: Original strand, 30967541 - 30967613
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    |||||||||||||||| || ||||  ||||| ||||| |||| ||||||||| | |||||  |||||||||||    
T  30967541 ttgattgaataccacaagactttttcataattaaaaaatcttttaaaatcccataaaatcataatccaataca 30967613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 381
Target Start/End: Original strand, 36094279 - 36094331
Alignment:
Q  329 attgaataccacaagatttatttatattttataaaaagtttgattgaatacca 381  Q
    |||||||| || || |||||||||| |||||||||||  ||||||||||||||    
T  36094279 attgaatatcataatatttatttatgttttataaaaatcttgattgaatacca 36094331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 443
Target Start/End: Original strand, 40537390 - 40537462
Alignment:
Q  371 attgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    ||||||||||||| || |||| ||| ||| ||||||||| |||||||||||  ||||   |||||||||||||    
T  40537390 attgaataccacaagacttttttatgatacaaaagtcttttaaaatcccttacaatcatgatccaatacaccc 40537462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 320 - 380
Target Start/End: Complemental strand, 42315022 - 42314962
Alignment:
Q  320 attgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaatacc 380  Q
    |||||| | |||||||||||||||||||||||| |||  |||||||  |||||| ||||||    
T  42315022 attgtcttcattgaataccacaagatttatttagattccataaaaatcttgattcaatacc 42314962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 419
Target Start/End: Original strand, 49835054 - 49835106
Alignment:
Q  367 tttgattgaataccacatgatttttctataataaaaaagtcttctaaaatccc 419  Q
    ||||||||||||||||| || ||||  ||||| |||||||||| |||||||||    
T  49835054 tttgattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 49835106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 54341108 - 54341036
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    |||||||||||||||| || ||||  ||||| |||||||||| ||||||||| |  ||||  |||||||||||    
T  54341108 ttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 54341036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 189; Significance: 1e-102; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 87 - 452
Target Start/End: Original strand, 10225396 - 10225762
Alignment:
Q  87 aaaatgaatctcgttggacagcaaggaaaagaaaattgcgagtctcacaaatttgtgtga--gattgttgaatgaacattttgttcatatttttaatcaa 184  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||  | ||||||||||| ||||||||||| ||||||||||||    
T  10225396 aaaatgaatctcgttggacagcaaggataagaaaattgtgagtctcacaaatttgtgagattgtttgttgaatgagcattttgttcacatttttaatcaa 10225495  T
Q  185 aaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattgaat 284  Q
     ||||||||||||||| ||  |||||| |||| |||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  10225496 gaagtctcacaaaatccatcacataaa-gaattcatcgaaatctatcaatttttgaatacccaaggacattttataagttgtgagaaatcctaattgaat 10225594  T
Q  285 accaacggatttcattgcattgnnnnnnnntcataattgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacat 384  Q
    ||||| ||||||| ||||||||        || | |||||| ||||||||||| ||||||||||||||||||||||||||   ||||||||||||||||     
T  10225595 accaatggatttcgttgcattgaaaaaaagtcttgattgtcttaattgaatactacaagatttatttatattttataaaagtcttgattgaataccacaa 10225694  T
Q  385 gatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctccttaatt 452  Q
    || |||| |||||| ||||||| || |||||| ||||||||| ||||||||| |||||  ||||||||    
T  10225695 gacttttttataatcaaaaagttttttaaaattccttgaaatttcaatccaaaacaccaaccttaatt 10225762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 87 - 452
Target Start/End: Original strand, 10215767 - 10216133
Alignment:
Q  87 aaaatgaatctcgttggacagcaaggaaaagaaaattgcgagtctcacaaatttgtgtga--gattgttgaatgaacattttgttcatatttttaatcaa 184  Q
    ||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||| ||  | ||||| ||||| ||||||||||| ||||||||||||    
T  10215767 aaaatgaatctcggtggacagcaaggataagaaaattgtgagtctcacaaatttgtgagattgtttgttaaatgagcattttgttcacatttttaatcaa 10215866  T
Q  185 aaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattgaat 284  Q
     |||||| |||||||| || ||||||| |||| |||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  10215867 gaagtcttacaaaatccatcccataaa-gaattcatcgaaatctatcaatttttgaatacccaaggacattttataagttgtgagaaatcctaattgaat 10215965  T
Q  285 accaacggatttcattgcattgnnnnnnnntcataattgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacat 384  Q
    ||||| ||||||| ||||||||        |  |  ||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||     
T  10215966 accaatggatttcgttgcattgaaaaaaagttttgcttgtcttaattgaataccacaagatttatttatattttataaaagttttgattgaataccacaa 10216065  T
Q  385 gatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctccttaatt 452  Q
    || |||| |||||| ||||||| || |||||| ||||||||| ||||||||| ||||| |||||||||    
T  10216066 gacttttttataatcaaaaagttttttaaaattccttgaaatttcaatccaaaacaccatccttaatt 10216133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 87 - 452
Target Start/End: Original strand, 10104619 - 10104986
Alignment:
Q  87 aaaatgaatctcgttggacagcaaggaaaagaaaattgcgagtctcacaaatttgtgtga--gattgttgaatgaacattttgttcatatttttaatcaa 184  Q
    ||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||  |  | ||||||||||| ||||||||||| ||||||||||||    
T  10104619 aaaatgaatctcggtggacagcaaggataagaaaattgtgagtctcacaaatttgtgacattgtttgttgaatgagcattttgttcacatttttaatcaa 10104718  T
Q  185 aaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattgaat 284  Q
     ||||||||||||||| || ||||||| ||||  ||| || |||||||||||||||||| | || |||||||||||||||||||||||||||||||||||    
T  10104719 gaagtctcacaaaatccatcccataaa-gaattaatcgaagtctatcaatttttgaatacccaaagacattttataagttgtgagaaatcctaattgaat 10104817  T
Q  285 accaacggatttcattgcattg-nnnnnnnntcataattgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccaca 383  Q
    ||||| ||||||| ||||||||         || | |||||| ||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||    
T  10104818 accaatggatttcgttgcattgaaaaaaaagtcttgattgtcttaattgaatactacaagatttatttatattttataaaagttttgattgaataccaca 10104917  T
Q  384 tgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctccttaatt 452  Q
     || |||| |||||| ||||||| || |||||| ||||||||| ||||||||| ||||| |||||||||    
T  10104918 agacttttttataatcaaaaagttttttaaaattccttgaaatttcaatccaaaacaccatccttaatt 10104986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 127 - 443
Target Start/End: Original strand, 45926712 - 45927033
Alignment:
Q  127 agtctcacaaatttgtgtgagattgttgaatgaacattttgttcatatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaat 226  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||   || ||||||||||||||| |||||    
T  45926712 agtctcataaatttttgtgagattgttgaatgagcattttgttcacatttttaatcaaaaagtctcacaaaatacgttgcataaaagaatccattaaaat 45926811  T
Q  227 ctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattgaataccaacggatttcattgcattg-nnnnnnnntcataattgtc 325  Q
    ||||||||||||||||| | || || ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||         |||| ||||||    
T  45926812 ctatcaatttttgaataccgaatgagattttataagttgtgagaaatcctaattgaataccaacggatttcgttgtattgaaaaaaatgtcatgattgtc 45926911  T
Q  326 ctaattgaataccacaagatttatttatattttataaaaagtttgattgaatac----cacatgatttttctataataaaaaagtcttctaaaatccctt 421  Q
     ||||||||||||||||||||||||||||||||||| ||   ||||||||||||     ||| || |||| |||||| |||||||||| |||||||| ||    
T  45926912 ttaattgaataccacaagatttatttatattttatagaagtcttgattgaatactacgtacaagacttttttataatcaaaaagtcttttaaaatccttt 45927011  T
Q  422 gaaatctcaatccaatacaccc 443  Q
     |||||||||||||||||||||    
T  45927012 aaaatctcaatccaatacaccc 45927033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 132 - 423
Target Start/End: Complemental strand, 46749562 - 46749271
Alignment:
Q  132 cacaaatttgtgtgagattgttgaatgaacattttgttcatatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatc 231  Q
    |||| |||| |||||||||||| |||||  | | |||| | ||||||||| |||||||||| ||||||| | ||||||||| |||||||||||||||||     
T  46749562 cacacatttttgtgagattgttaaatgagaagtgtgttgacatttttaattaaaaagtctctcaaaatccactccataaaa-aatccatcaaaatctatt 46749464  T
Q  232 aatttttg-aatatctaaggacattttataagttgtgagaaatcctaattgaataccaacggatttcattgcattgnnnnnnnntcataattgtcctaat 330  Q
    |||||||  |||| | |  ||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||        || | |||||| ||||    
T  46749463 aatttttttaatagcaacagacattttataagttgtgagaaatcttaattgaatatcaacggatttcgttgcattgaaaaaaaatcttgattgtcttaat 46749364  T
Q  331 tgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||| ||||||||||||||||||||||||   |||||| | ||||||| || |||| |||||||||||| |||| |||||||| ||||    
T  46749363 tgaataccataagatttatttatattttataaaagtcttgattcattaccacaagacttttttataataaaaaaatcttttaaaatccattga 46749271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 10104982 - 10105086
Alignment:
Q  327 taattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaat 426  Q
    ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||    
T  10104982 taattgaataccacaagatttatttatattttataaaagtcttgattgaataccacaagatttttttataataaaaaagtcttttaaaatcccttgaaat 10105081  T
Q  427 ctcaa 431  Q
    |||||    
T  10105082 ctcaa 10105086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 10225758 - 10225862
Alignment:
Q  327 taattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaat 426  Q
    ||||||||||||||||||||||||||||||||||||||   ||||||||||| |||| || |||| ||||||||||||||||| ||||||||||||||||    
T  10225758 taattgaataccacaagatttatttatattttataaaagtcttgattgaatagcacaagacttttttataataaaaaagtcttttaaaatcccttgaaat 10225857  T
Q  427 ctcaa 431  Q
    |||||    
T  10225858 ctcaa 10225862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 10216129 - 10216233
Alignment:
Q  327 taattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaat 426  Q
    ||||||||||| ||||||||||||||||||||||||||   |||||||||||||||| || |||| |||||||||||| |||| ||||||||||| ||||    
T  10216129 taattgaatacgacaagatttatttatattttataaaagtcttgattgaataccacaagacttttttataataaaaaaatcttttaaaatccctttaaat 10216228  T
Q  427 ctcaa 431  Q
    |||||    
T  10216229 ctcaa 10216233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 324 - 452
Target Start/End: Original strand, 50900412 - 50900540
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  |||| ||| | ||||||  |||||||||||||||| || |||| || || ||||||||||| |||||||| ||||    
T  50900412 tcctaattgaataccacaagaatgttttacattctttaaaaatcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctttga 50900511  T
Q  424 aatctcaatccaatacaccctccttaatt 452  Q
    ||||| |||||||||||||| ||||||||    
T  50900512 aatcttaatccaatacacccaccttaatt 50900540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 320 - 447
Target Start/End: Original strand, 45215362 - 45215489
Alignment:
Q  320 attgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatccc 419  Q
    |||||| | ||| |||||||  |||||||||||| ||||||||||  ||||||||||||||||| ||||||| ||| || |||||||||| |||||||||    
T  45215362 attgtcttgattcaataccatgagatttatttatgttttataaaagttttgattgaataccacaagatttttttattattaaaaagtcttttaaaatccc 45215461  T
Q  420 ttgaaatctcaatccaatacaccctcct 447  Q
    || |||||| |||  |||||||||||||    
T  45215462 ttcaaatcttaatttaatacaccctcct 45215489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 324 - 443
Target Start/End: Original strand, 19552113 - 19552232
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  |||| ||||  ||||||  |||||||||||||||| || |||| || ||||||||| |||| |||||||| || |    
T  19552113 tcctaattgaataccacaagaatgttttacatttcttaaaaatcttgattgaataccacaagacttttataaaataaaaaaatcttttaaaatcctttaa 19552212  T
Q  424 aatctcaatccaatacaccc 443  Q
    ||||||||||||||||||||    
T  19552213 aatctcaatccaatacaccc 19552232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 327 - 450
Target Start/End: Complemental strand, 38682541 - 38682419
Alignment:
Q  327 taattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaat 426  Q
    |||||||||||||||| | || |||| ||||  ||||||  |||||||||||||||| ||||||| || || ||||||||||| |||||||| |||||||    
T  38682541 taattgaataccacaataatt-tttacatttcttaaaaatcttgattgaataccacaagatttttttaaaacaaaaaagtcttttaaaatcctttgaaat 38682443  T
Q  427 ctcaatccaatacaccctccttaa 450  Q
    |||||| |||||||||| ||||||    
T  38682442 ctcaatacaatacacccaccttaa 38682419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 324 - 449
Target Start/End: Original strand, 36054972 - 36055097
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||| | |  |||| |||   ||||||  |||||||||||||||| || |||| || || ||||||||||| |||||||| ||||    
T  36054972 tcctaattgaataccacaaaaatgttttacattccttaaaaatcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctttga 36055071  T
Q  424 aatctcaatccaatacaccctcctta 449  Q
    |||||||||||||||||||| |||||    
T  36055072 aatctcaatccaatacacccccctta 36055097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 324 - 443
Target Start/End: Original strand, 24150797 - 24150916
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  |||| |||   ||||||  |||||||||||||||| ||||||| || || |||||| |||| |||||||| ||||    
T  24150797 tcctaattgaataccacaagaatgttttacattccttaaaaatcttgattgaataccacaagatttttataaaacaaaaaaatcttttaaaatcctttga 24150896  T
Q  424 aatctcaatccaatacaccc 443  Q
    ||||||||||||||| ||||    
T  24150897 aatctcaatccaatataccc 24150916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 324 - 443
Target Start/End: Complemental strand, 26555933 - 26555814
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||| | |  |||| |||   ||||||  |||||||||||||||| || |||| || || ||||||||||| |||||||| ||||    
T  26555933 tcctaattgaataccacaataatattttacattccttaaaaatcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctttga 26555834  T
Q  424 aatctcaatccaatacaccc 443  Q
    ||||||||||||||||||||    
T  26555833 aatctcaatccaatacaccc 26555814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 375 - 450
Target Start/End: Original strand, 10067700 - 10067775
Alignment:
Q  375 aataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctccttaa 450  Q
    |||||||||  | |||| |||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  10067700 aataccacaaaacttttttataatgaaaaagtcttttaaaatcccttgaaatctcaattcaatacaccctccttaa 10067775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 324 - 443
Target Start/End: Complemental strand, 30588958 - 30588839
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  |||| ||| | ||||||  |||||||||||||||| || |||| || || ||||||||||| |||||||| || |    
T  30588958 tcctaattgaataccacaagaatgttttacattctttaaaaatcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctttaa 30588859  T
Q  424 aatctcaatccaatacaccc 443  Q
    ||| |||||| |||||||||    
T  30588858 aatttcaatctaatacaccc 30588839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 170 - 440
Target Start/End: Complemental strand, 44701816 - 44701546
Alignment:
Q  170 catatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgag 269  Q
    |||||||||||  ||||||||||| |||||| |||||||  | ||||||||||||||||||  | ||||||||| | |  |||| || |||| |  | ||    
T  44701816 catatttttaactaaaaagtctcataaaatccattccatccatgaatccatcaaaatctatagacttttgaataccaatagacaattcataaatcattag 44701717  T
Q  270 aaatcctaattgaataccaacggatttcattgcattgnnnnnnnntcataattgtcctaattgaataccacaagatttatttatattttataaaaagttt 369  Q
    |||||  |||||||||||||| |||||  |||| ||         |||| |||||  | ||||||||||||||||||| |||| |||||||||||   ||    
T  44701716 aaatctcaattgaataccaacagattttgttgcctt-aaaaaaagtcatgattgttttgattgaataccacaagatttgtttacattttataaaagtctt 44701618  T
Q  370 gattgaataccacatgatttttctataataaaaaa-gtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    ||||||||| |||  ||  |||  || |||||||| ||||| |||||||||||||| ||||||| |||||||    
T  44701617 gattgaatatcactagacattttcattataaaaaatgtcttttaaaatcccttgaattctcaattcaataca 44701546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 452
Target Start/End: Original strand, 52024167 - 52024293
Alignment:
Q  327 taattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatga-tttttctataataaaaaagtcttctaaaatcccttgaaa 425  Q
    |||||||||||||||||| |  |||| |||   ||||||  |||||||||||||||| || ||||| || || ||||||||||| |||||||| ||||||    
T  52024167 taattgaataccacaagaatgttttacattccttaaaaatcttgattgaataccacaagactttttttaaaacaaaaaagtcttttaaaatcctttgaaa 52024266  T
Q  426 tctcaatccaatacaccctccttaatt 452  Q
    |||||||||||| ||||| ||| ||||    
T  52024267 tctcaatccaatgcacccccctaaatt 52024293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 452
Target Start/End: Original strand, 25713404 - 25713532
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    |||||||||||||||||  ||||||||| || | | | ||||  ||||| ||||||| || |||||||||||||  ||||| |||| |||||||| | ||    
T  25713404 tcctaattgaataccaccggatttatttctaatcttttaaaatcttgatggaatacctcaagatttttctataactaaaaactcttttaaaatccttcga 25713503  T
Q  424 aatctcaatccaatacaccctccttaatt 452  Q
    |||| |||| |||||||||||||| ||||    
T  25713504 aatcccaattcaatacaccctcctaaatt 25713532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 324 - 443
Target Start/End: Original strand, 26005948 - 26006067
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  |||| |||   | |||| ||| ||||||||  ||| || |||| || || ||||||||||| |||||||| ||||    
T  26005948 tcctaattgaataccacaagaatgttttacattcctttaaaatttttattgaatattacaagacttttataaaacaaaaaagtcttttaaaatcctttga 26006047  T
Q  424 aatctcaatccaatacaccc 443  Q
    ||||||||||||||||||||    
T  26006048 aatctcaatccaatacaccc 26006067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 327 - 442
Target Start/End: Complemental strand, 35731048 - 35730933
Alignment:
Q  327 taattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaat 426  Q
    |||||||||||||||||| |  |||| |||   ||||||  ||||||||||| |||| || |||| || || |||||| |||| |||||||| |||||||    
T  35731048 taattgaataccacaagaatgttttacattccttaaaaatcttgattgaatatcacaagacttttataaaacaaaaaaatcttttaaaatcctttgaaat 35730949  T
Q  427 ctcaatccaatacacc 442  Q
    ||||||||||||||||    
T  35730948 ctcaatccaatacacc 35730933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 329 - 451
Target Start/End: Original strand, 34292474 - 34292596
Alignment:
Q  329 attgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatct 428  Q
    |||||||||||||| ||||||| | |||  |||||||  |||||||||||| ||| ||||||| |||  | ||||| |||| |||||| || ||| |||     
T  34292474 attgaataccacaaaatttattaaaattcaataaaaatcttgattgaatactacaagatttttttatttttaaaaaatcttttaaaattccatgatatcc 34292573  T
Q  429 caatccaatacaccctccttaat 451  Q
    |||| ||||||||||||||||||    
T  34292574 caattcaatacaccctccttaat 34292596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 449
Target Start/End: Complemental strand, 13662623 - 13662542
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctcctta 449  Q
    |||||||||||||||  || |||| || || ||||||||||| |||||| | |||||||||||||||||||||||| |||||    
T  13662623 ttgattgaataccacgagacttttgtaaaacaaaaaagtcttttaaaattctttgaaatctcaatccaatacacccccctta 13662542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 324 - 441
Target Start/End: Original strand, 26293532 - 26293649
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  |||| |||   ||||||  ||||||||||||||||  | |||| || || ||||||||||| |||||||| ||||    
T  26293532 tcctaattgaataccacaagaatgttttacattccttaaaaatcttgattgaataccacaaaacttttataaaacaaaaaagtcttttaaaatcctttga 26293631  T
Q  424 aatctcaatccaatacac 441  Q
    ||| ||||| ||||||||    
T  26293632 aatttcaattcaatacac 26293649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 320 - 381
Target Start/End: Original strand, 44042006 - 44042067
Alignment:
Q  320 attgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaatacca 381  Q
    |||||| |||||||||||||||||||||||||||||| |||||||   ||||||||||||||    
T  44042006 attgtcttaattgaataccacaagatttatttatattctataaaagtcttgattgaatacca 44042067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 443
Target Start/End: Original strand, 38629765 - 38629884
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||| | |  |||| |||   ||||||  |||||||||||||||| || |||| || || ||||||||||| ||||||   ||||    
T  38629765 tcctaattgaataccacaaaaatgttttacattccttaaaaatcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaattatttga 38629864  T
Q  424 aatctcaatccaatacaccc 443  Q
    ||||| ||||||||||||||    
T  38629865 aatcttaatccaatacaccc 38629884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 379
Target Start/End: Original strand, 10055755 - 10055804
Alignment:
Q  330 ttgaataccacaagatttatttatattttataaaaagtttgattgaatac 379  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||||    
T  10055755 ttgaataccacaagatttatttatattttataaaagtcttgattgaatac 10055804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 421
Target Start/End: Original strand, 29449102 - 29449155
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatccctt 421  Q
    |||||||||||||||| |||||||  |||||||||||||||| |||||||||||    
T  29449102 ttgattgaataccacaagattttttcataataaaaaagtcttttaaaatccctt 29449155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 142 - 243
Target Start/End: Original strand, 34292295 - 34292396
Alignment:
Q  142 tgtgagattgttgaatgaacattttgttcatatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaa 241  Q
    |||||||||||||||||| ||| || |   |||||||| | ||||| |||||||||||| | ||||||||||||||| | |||||||||  | |||||||    
T  34292295 tgtgagattgttgaatgagcatcttatgtgtatttttagttaaaaaatctcacaaaatccactccataaaagaatcctttaaaatctatatacttttgaa 34292394  T
Q  242 ta 243  Q
    ||    
T  34292395 ta 34292396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 442
Target Start/End: Original strand, 12103358 - 12103485
Alignment:
Q  315 tcataattgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccac-atgatttttctataataaaaaagtcttctaa 413  Q
    |||| |||||| | ||||||||| ||||||||||||||||||  |||||||  | ||||||||||||| | || |||| |||  |  |||||||||  ||    
T  12103358 tcatgattgtcttgattgaatactacaagatttatttatattcaataaaaatctagattgaataccacaaagacttttttat-ttttaaaagtctttaaa 12103456  T
Q  414 aatcccttgaaatctcaatccaatacacc 442  Q
    |||||| |||||||||||| |||||||||    
T  12103457 aatcccatgaaatctcaattcaatacacc 12103485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 368 - 443
Target Start/End: Original strand, 6035294 - 6035369
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||||| |||||||  ||||| |||||||||| ||||||||| | |||||| ||||  ||||||||    
T  6035294 ttgattgaataccacaagattttttcataattaaaaagtcttttaaaatcccataaaatcttaatctgatacaccc 6035369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 318 - 443
Target Start/End: Complemental strand, 23697130 - 23697005
Alignment:
Q  318 taattgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatc 417  Q
    |||||||| | ||||||||||||| |||||||||| |||  ||||||   |||||| |||| | || ||||||  | | ||||||||||||  ||||||     
T  23697130 taattgtcttgattgaataccacatgatttatttagattcaataaaagtcttgattcaataactcaagattttcttttcataaaaaagtctattaaaatt 23697031  T
Q  418 ccttgaaatctcaatccaatacaccc 443  Q
    | ||||||| ||||| ||||||||||    
T  23697030 ctttgaaatttcaattcaatacaccc 23697005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 183 - 296
Target Start/End: Complemental strand, 23697268 - 23697155
Alignment:
Q  183 aaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattga 282  Q
    ||||||||||||| |||| ||| || ||| |||||||| ||||||  || | |||| |||| |    ||||||||||||||| | ||||||| |||||||    
T  23697268 aaaaagtctcacacaatccattacacaaatgaatccattaaaatccgtctaattttcaataccacgagacattttataagttcttagaaatcttaattga 23697169  T
Q  283 ataccaacggattt 296  Q
    |||| |||||||||    
T  23697168 atacaaacggattt 23697155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 318 - 443
Target Start/End: Complemental strand, 23715585 - 23715460
Alignment:
Q  318 taattgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatc 417  Q
    |||||||| | ||||||||||||| |||||||||| |||  ||||||   |||||| |||| | || ||||||  | | ||||||||||||  ||||||     
T  23715585 taattgtcttgattgaataccacatgatttatttagattcaataaaagtcttgattcaataactcaagattttcttttcataaaaaagtctattaaaatt 23715486  T
Q  418 ccttgaaatctcaatccaatacaccc 443  Q
    | ||||||| ||||| ||||||||||    
T  23715485 ctttgaaatttcaattcaatacaccc 23715460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 318 - 443
Target Start/End: Complemental strand, 23734041 - 23733916
Alignment:
Q  318 taattgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatc 417  Q
    |||||||| | ||||||||||||| |||||||||| |||  ||||||   |||||| |||| | || ||||||  | | ||||||||||||  ||||||     
T  23734041 taattgtcttgattgaataccacatgatttatttagattcaataaaagtcttgattcaataactcaagattttcttttcataaaaaagtctattaaaatt 23733942  T
Q  418 ccttgaaatctcaatccaatacaccc 443  Q
    | ||||||| ||||| ||||||||||    
T  23733941 ctttgaaatttcaattcaatacaccc 23733916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 318 - 443
Target Start/End: Complemental strand, 23752499 - 23752374
Alignment:
Q  318 taattgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatc 417  Q
    |||||||| | ||||||||||||| |||||||||| |||  ||||||   |||||| |||| | || ||||||  | | ||||||||||||  ||||||     
T  23752499 taattgtcttgattgaataccacatgatttatttaaattcaataaaagtcttgattcaataactcaagattttcttttcataaaaaagtctattaaaata 23752400  T
Q  418 ccttgaaatctcaatccaatacaccc 443  Q
      ||||||||||||| ||||||||||    
T  23752399 atttgaaatctcaattcaatacaccc 23752374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 368 - 421
Target Start/End: Complemental strand, 35337699 - 35337646
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatccctt 421  Q
    |||||||||||||||| || ||||  |||||||||||||||| |||||||||||    
T  35337699 ttgattgaataccacaagactttttcataataaaaaagtcttttaaaatccctt 35337646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 10660499 - 10660427
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    |||||||||||||||| || ||||  ||||| |||||||||| ||||||||| |  ||||| |||||||||||    
T  10660499 ttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcttaatccaataca 10660427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 12103185 - 12103269
Alignment:
Q  142 tgtgagattgttgaatgaacattttgttcatatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaat 226  Q
    |||||||| ||||||||| ||| || |   |||||||| | ||||||||||||||||| || ||||||||| ||||||| |||||    
T  12103185 tgtgagatcgttgaatgagcatgttatgtgtatttttagttaaaaagtctcacaaaatttactccataaaaaaatccattaaaat 12103269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 452
Target Start/End: Original strand, 12734082 - 12734166
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctccttaatt 452  Q
    |||||||||||||||| || ||||  || ||||||||||||| |||||||||||  ||||   ||||||||||||| ||| ||||    
T  12734082 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccccctaaatt 12734166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 443
Target Start/End: Original strand, 996327 - 996402
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||||| || ||||  || ||||||||||||| |||||||||||  ||||   |||||||||||||    
T  996327 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccc 996402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 443
Target Start/End: Original strand, 3206438 - 3206513
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||||| || ||||  || ||||||||||||| |||||||||||  ||||   |||||||||||||    
T  3206438 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccc 3206513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 438
Target Start/End: Original strand, 6784069 - 6784180
Alignment:
Q  327 taattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaat 426  Q
    ||||| |||||||| ||| |||||| || | | | ||||  ||||||||||| | || ||||||| |||||  |||||||||| |||||||| |||||||    
T  6784069 taatttaataccaccagaattatttctaatcttttaaaatcttgattgaatatctcaagatttttgtataactaaaaagtcttataaaatcctttgaaat 6784168  T
Q  427 ctcaatccaata 438  Q
    ||| || |||||    
T  6784169 ctcgattcaata 6784180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 37820719 - 37820798
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctcct 447  Q
    |||||||||||||||| || ||||  || ||||||||||||| |||||||||||  ||||   |||||||| ||||||||    
T  37820719 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcattatccaatataccctcct 37820798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 443
Target Start/End: Original strand, 53184082 - 53184157
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||||  || |||| || || |||||| |||| |||||||| ||||||||||||| ||||| ||||    
T  53184082 ttgattgaataccacgagacttttttaaaacaaaaaaatcttttaaaatccattgaaatctcaattcaatagaccc 53184157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 296
Target Start/End: Complemental strand, 85945 - 85899
Alignment:
Q  250 gacattttataagttgtgagaaatcctaattgaataccaacggattt 296  Q
    ||||||||||||||| | | ||||| |||||||||||||||||||||    
T  85945 gacattttataagttcttaaaaatcttaattgaataccaacggattt 85899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 421
Target Start/End: Complemental strand, 19253791 - 19253738
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatccctt 421  Q
    |||||||||||||||| || ||||  || ||||||||||||| |||||||||||    
T  19253791 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatccctt 19253738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 421
Target Start/End: Original strand, 44762279 - 44762332
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatccctt 421  Q
    |||||||||||||||| || ||||  || ||||||||||||| |||||||||||    
T  44762279 ttgattgaataccacaagactttttcattataaaaaagtcttttaaaatccctt 44762332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 448
Target Start/End: Complemental strand, 29029970 - 29029890
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctcctt 448  Q
    ||||||||||||||||  ||||||  || ||| ||||||||| |||||||||||  ||||   |||||||||| |||||||    
T  29029970 ttgattgaataccacaatattttttcatgatataaaagtcttttaaaatcccttagaatcatgatccaatacatcctcctt 29029890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 440
Target Start/End: Original strand, 36674372 - 36674444
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    |||||||||||||||| || ||||  ||||| |||||||||| ||||||||| |  ||||  |||||||||||    
T  36674372 ttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 36674444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 300
Target Start/End: Complemental strand, 43601814 - 43601766
Alignment:
Q  252 cattttataagttgtgagaaatcctaattgaataccaacggatttcatt 300  Q
    |||||||||| ||||||||| |  ||||||||||| |||||||||||||    
T  43601814 cattttataaattgtgagaatttgtaattgaatactaacggatttcatt 43601766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 50901203 - 50901255
Alignment:
Q  388 ttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    |||| |||||| |||||||||| ||||||||||| |||| | |||||||||||    
T  50901203 ttttttataattaaaaagtcttttaaaatcccttaaaattttaatccaataca 50901255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 182; Significance: 3e-98; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 87 - 452
Target Start/End: Original strand, 26795238 - 26795605
Alignment:
Q  87 aaaatgaatctcgttggacagcaaggaaaagaaaattgcgagtctcacaaatttgtgtga--gattgttgaatgaacattttgttcatatttttaatcaa 184  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||  | ||||||||||| ||||||||||| ||||||||||||    
T  26795238 aaaatgaatctcgttggacagcaaggataagaaaattgtgagtctcacaaatttgtgagattgtttgttgaatgagcattttgttcacatttttaatcaa 26795337  T
Q  185 aaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattgaat 284  Q
     ||||||||||||||| || ||||||| ||||  ||| || |||||||||||||||||| | || |||||||||||||||||||||||||||||||||||    
T  26795338 gaagtctcacaaaatccatcccataaa-gaattaatcgaagtctatcaatttttgaatacccaaagacattttataagttgtgagaaatcctaattgaat 26795436  T
Q  285 accaacggatttcattgcattg-nnnnnnnntcataattgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccaca 383  Q
    ||||| ||||||| ||||||||         || | |||||| ||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||    
T  26795437 accaatggatttcgttgcattgaaaaaaaagtcttgattgtcttaattgaatactacaagatttatttatattttataaaagttttgattgaataccaca 26795536  T
Q  384 tgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctccttaatt 452  Q
     || |||| |||||| ||||||| || |||||| ||||||||| ||||||||| ||||| |||||||||    
T  26795537 agacttttttataatcaaaaagttttttaaaattccttgaaatttcaatccaaaacaccatccttaatt 26795605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 127 - 443
Target Start/End: Original strand, 28594208 - 28594527
Alignment:
Q  127 agtctcacaaatttgtgtgagattgttgaatgaacattttgttcatatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaat 226  Q
    |||||||||||||| |||||||||||||||||| |||||| |||| ||||||||  |||||||||||||||||| |||  |||||||||||||| |||||    
T  28594208 agtctcacaaatttttgtgagattgttgaatgagcattttattcacatttttaactaaaaagtctcacaaaatccattatataaaagaatccattaaaat 28594307  T
Q  227 ctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattgaataccaacggatttcattgcattg--nnnnnnnntcataattgt 324  Q
    ||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||          |||| |||||    
T  28594308 ctatcaatttttgaataccgaaagacattttataagttgtgagaaatcctaattgaataccaacggatttcgttgtattgaaaaaaaaagtcatgattgt 28594407  T
Q  325 cctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataat-aaaaaagtcttctaaaatcccttga 423  Q
    | ||||| ||||||||||||||||||||| |||||||||||  |||||||||||||||| || |||| |||||| ||||||||||| ||||||| ||| |    
T  28594408 cttaattaaataccacaagatttatttatgttttataaaaatcttgattgaataccacaagacttttttataataaaaaaagtcttttaaaatctcttaa 28594507  T
Q  424 aatctcaatccaatacaccc 443  Q
    |||| ||||| |||||||||    
T  28594508 aatcccaatcaaatacaccc 28594527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 127 - 444
Target Start/End: Complemental strand, 27786520 - 27786209
Alignment:
Q  127 agtctcacaaatttgtgtgagattgttgaatgaacattttgttcatatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaat 226  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||| ||||||||  |||||||||||||||||| ||||||||||||||||||| |||||    
T  27786520 agtctcataaatttttgtgagattgttgaatgagcattttgttcacatttttaactaaaaagtctcacaaaatccattccataaaagaatccattaaaat 27786421  T
Q  227 ctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattgaataccaacggatttcattgcattgnnnnnnnntcataattgtcc 326  Q
    ||||||||||||||||| | || ||||||||||||||||||||||||| ||||||||||   ||||||||| ||  ||||        |||| ||||||     
T  27786420 ctatcaatttttgaataccgaatgacattttataagttgtgagaaatcataattgaataatgacggatttcgttatattgaaaaaaagtcatgattgtct 27786321  T
Q  327 taattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaat 426  Q
    ||||||||||||||||||||||||||||||||   |||||      ||||||||||| || |||| ||||||||||||||||| ||||||||||||||||    
T  27786320 taattgaataccacaagatttatttatatttttataaaag------tgaataccacaagacttttttataataaaaaagtcttttaaaatcccttgaaat 27786227  T
Q  427 ctcaatccaatacaccct 444  Q
    || |||||||||||||||    
T  27786226 cttaatccaatacaccct 27786209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 226 - 452
Target Start/End: Original strand, 26806442 - 26806669
Alignment:
Q  226 tctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattgaataccaacggatttcattgcattgnnnnnnnn-tcataattgt 324  Q
    |||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||         || | |||||    
T  26806442 tctatcaatttttgaatacccaaagacattttataagttgtgagaaatcctaattgaataccaatggatttcgttgcattgaaaaaaaagtcttgattgt 26806541  T
Q  325 cctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaa 424  Q
    | ||||||||||| ||||||||||||||||||||||||||   |||||||||||||||| || |||| |||||| ||||||| || |||||| |||||||    
T  26806542 cttaattgaatactacaagatttatttatattttataaaagtcttgattgaataccacaagacttttttataatcaaaaagttttttaaaattccttgaa 26806641  T
Q  425 atctcaatccaatacaccctccttaatt 452  Q
    || ||||||||| |||||  ||||||||    
T  26806642 atttcaatccaaaacaccaaccttaatt 26806669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 142 - 443
Target Start/End: Original strand, 9689127 - 9689420
Alignment:
Q  142 tgtgagattgttgaatgaacattttgttcatatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaa 241  Q
    ||||||||||||||||||  |||||||| ||||||||||  |||||||||||||||||  | |||||  || ||||||| |||||||||  |||||||||    
T  9689127 tgtgagattgttgaatgagtattttgtttatatttttaactaaaaagtctcacaaaattcactccatccaataatccattaaaatctatgtatttttgaa 9689226  T
Q  242 tatctaaggacattttataagttgtgagaaatcctaattgaataccaacggatttcattgcattg-nnnnnnnntcataattgtcctaattgaataccac 340  Q
    |||| | |||||||||||||||  |||||||||  ||||||||||||||||||||| ||||||||         | || |||||| |||||             
T  9689227 tatcaatggacattttataagtaatgagaaatctcaattgaataccaacggatttcgttgcattgaaaaaagaattatgattgtcttaatt--------- 9689317  T
Q  341 aagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    |||||||||||||||||||||||||  ||||||||||||| || ||||||| |||||| ||||| |||| ||||||| |||||||||| |||| ||||||    
T  9689318 aagatttatttatattttataaaaatcttgattgaatacctcaagatttttttataattaaaaaatcttttaaaatctcttgaaatctaaatcaaataca 9689417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 26795601 - 26795705
Alignment:
Q  327 taattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaat 426  Q
    ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||    
T  26795601 taattgaataccacaagatttatttatattttataaaagtcttgattgaataccacaagatttttttataataaaaaagtcttttaaaatcccttgaaat 26795700  T
Q  427 ctcaa 431  Q
    |||||    
T  26795701 ctcaa 26795705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 26806665 - 26806769
Alignment:
Q  327 taattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaat 426  Q
    ||||||||||||||||||||||||||||||||||||||   ||||||||||| |||| ||||||| ||||||||||||||||| ||||||||||||||||    
T  26806665 taattgaataccacaagatttatttatattttataaaagtcttgattgaatatcacaagatttttttataataaaaaagtcttttaaaatcccttgaaat 26806764  T
Q  427 ctcaa 431  Q
    |||||    
T  26806765 ctcaa 26806769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 142 - 440
Target Start/End: Original strand, 2275987 - 2276286
Alignment:
Q  142 tgtgagattgttgaatgaacattttgttcatatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaa 241  Q
    |||||||||||||||||| ||| |  |   |||||||||  ||||| |||||||||||| |||  | |||||||||||| |||||||||  | |||||||    
T  2275987 tgtgagattgttgaatgagcatgtcatgtgtatttttaactaaaaaatctcacaaaatccattatacaaaagaatccattaaaatctatagacttttgaa 2276086  T
Q  242 tatctaaggacattttataagttgtgagaaatcctaattgaataccaacggatttcattgcattgnnnnnnnn-tcataattgtcctaattgaataccac 340  Q
    |||| |  |||| || ||||||  ||||||||  |||||||||||||||| ||||  |||| ||          |||| |||||  ||||||||||||||    
T  2276087 tatcaatagacaattcataagtcatgagaaattttaattgaataccaacgaattttgttgccttaaaaaaaaaatcatgattgttttaattgaataccac 2276186  T
Q  341 aagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    |||||||||||| |||||||||||   |||||||||||||||   |||||| ||| ||||||||| ||| |||||||||||||| ||||||| |||||||    
T  2276187 aagatttatttacattttataaaagtcttgattgaataccactaaatttttttattataaaaaagacttttaaaatcccttgaattctcaattcaataca 2276286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 315 - 443
Target Start/End: Complemental strand, 39753563 - 39753435
Alignment:
Q  315 tcataattgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaa 414  Q
    |||| |||||| | |||||||| |||||||||| ||||||||||||||||   |||||||||||||||   | |||| |||   ||||||||||||||||    
T  39753563 tcatgattgtcttgattgaatatcacaagatttttttatattttataaaagtcttgattgaataccaccaaacttttttatttaaaaaaagtcttctaaa 39753464  T
Q  415 atcccttgaaatctcaatccaatacaccc 443  Q
    |||| |||||||| |||||||||||||||    
T  39753463 atccgttgaaatcacaatccaatacaccc 39753435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 324 - 443
Target Start/End: Complemental strand, 40410709 - 40410590
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  |||| |||   ||||||  |||||||||||||||| || |||| || || ||||||||||| |||||||| ||||    
T  40410709 tcctaattgaataccacaagaatgttttacattccttaaaaatcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatccattga 40410610  T
Q  424 aatctcaatccaatacaccc 443  Q
    ||||||||||||||||||||    
T  40410609 aatctcaatccaatacaccc 40410590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 430
Target Start/End: Complemental strand, 378494 - 378245
Alignment:
Q  183 aaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattga 282  Q
    ||||||| ||||| |||| |||||||| |||||||||| |||||||||||| |||| || ||| |  ||||||||||||||| | |||||||  ||||||    
T  378494 aaaaagtttcacacaatccattccatagaagaatccattaaaatctatcaaattttcaacatcgagagacattttataagttcttagaaatctcaattga 378395  T
Q  283 ataccaacggatttcattgcattg-nnnnnnnntcataattgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaatacca 381  Q
    ||||||||  ||||| |||  |||         || | |||||  | ||||||||| |||||||||||||| |||||||| ||   ||||||||||||||    
T  378394 ataccaacatatttcgttgtcttgaaaaaaaagtcttgattgttttgattgaatactacaagatttatttagattttatagaagtcttgattgaatacca 378295  T
Q  382 catgatttttctataat-aaaaaagtcttctaaaatcccttgaaatctca 430  Q
    || || || | ||| || |||||| |||  |||||||| |||||||||||    
T  378294 caagacttctttatcataaaaaaaatctattaaaatcctttgaaatctca 378245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 443
Target Start/End: Original strand, 3604412 - 3604537
Alignment:
Q  318 taattgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatc 417  Q
    |||||||| | |||||||||||||||||||||||| |||| ||||||  ||||||| |||||| || ||||||  | | |||| |||||||  |||||||    
T  3604412 taattgtcttgattgaataccacaagatttatttagatttcataaaagttttgattcaatacctcaagattttcttttcataagaaagtctattaaaatc 3604511  T
Q  418 ccttgaaatctcaatccaatacaccc 443  Q
      ||||||||||||| ||||||||||    
T  3604512 atttgaaatctcaattcaatacaccc 3604537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 368 - 453
Target Start/End: Complemental strand, 7857100 - 7857015
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctccttaattt 453  Q
    ||||||||||||| || |||||||||||||  |||||||||| |||||||| |  ||||||||||| |||||||||||||||||||    
T  7857100 ttgattgaatacctcaagatttttctataaccaaaaagtcttttaaaatccttctaaatctcaatctaatacaccctccttaattt 7857015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 324 - 441
Target Start/End: Complemental strand, 10571230 - 10571113
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  |||| |||   |||||| |||||||||||| |||| || |||| || ||  ||||||| || |||||||| ||||    
T  10571230 tcctaattgaataccacaagaatgttttacattccttaaaaattttgattgaatatcacaagacttttataaaacgaaaaagttttttaaaatccattga 10571131  T
Q  424 aatctcaatccaatacac 441  Q
    ||||||||||||||||||    
T  10571130 aatctcaatccaatacac 10571113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 324 - 457
Target Start/End: Complemental strand, 17518547 - 17518414
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||| ||||||| |  |||| |||   ||||||  |||||||||||||||| || |||| || ||  |||||||||| |||||||| ||||    
T  17518547 tcctaattgaatagcacaagaatgttttacattccttaaaaatcttgattgaataccacaagacttttttaaaacgaaaaagtcttttaaaatccattga 17518448  T
Q  424 aatctcaatccaatacaccctccttaatttcatc 457  Q
    |||||||||| |||||| || ||||||| |||||    
T  17518447 aatctcaatctaatacatcccccttaatatcatc 17518414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 288
Target Start/End: Complemental strand, 36682156 - 36682051
Alignment:
Q  183 aaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattga 282  Q
    ||||||||||| ||||||||    | ||||||||||||||||||||| | ||||||||||| |||  ||||||||||| ||||  | ||||| | |||||    
T  36682156 aaaaagtctcataaaatctaccgtacaaaagaatccatcaaaatctacctatttttgaatacctatagacattttataggttggtacaaatcttgattga 36682057  T
Q  283 atacca 288  Q
    ||||||    
T  36682056 atacca 36682051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 452
Target Start/End: Original strand, 33656284 - 33656368
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctccttaatt 452  Q
    |||||||||||||||| || ||||  || |||||||| |||| ||||||||||| |||||   ||||||||||||||||| ||||    
T  33656284 ttgattgaataccacaagactttttcatgataaaaaaatcttttaaaatcccttaaaatcatgatccaatacaccctcctaaatt 33656368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 441
Target Start/End: Original strand, 5273202 - 5273276
Alignment:
Q  368 ttgattgaataccacatgatttttct-ataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacac 441  Q
    |||||||||||||||| ||||||| | || ||||||||||||| ||||||||||| |||||   |||||||||||    
T  5273202 ttgattgaataccacaagatttttttcatgataaaaaagtcttttaaaatcccttaaaatcatgatccaatacac 5273276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 296
Target Start/End: Original strand, 3604277 - 3604389
Alignment:
Q  184 aaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattgaa 283  Q
    |||||||||||| |||| ||| |  ||| |||||||| ||||||| || | |||| |||| |    ||||||||||||||| | | ||||| ||||||||    
T  3604277 aaaagtctcacacaatccattacgcaaatgaatccattaaaatctgtctaattttcaataccacgagacattttataagttcttaaaaatcttaattgaa 3604376  T
Q  284 taccaacggattt 296  Q
    |||||||||||||    
T  3604377 taccaacggattt 3604389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 451
Target Start/End: Original strand, 6902691 - 6902743
Alignment:
Q  399 aaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctccttaat 451  Q
    ||||||||||| |||||||| |  ||||||||||||||||||| |||||||||    
T  6902691 aaaaaagtcttttaaaatccttccaaatctcaatccaatacacactccttaat 6902743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 440
Target Start/End: Original strand, 14000307 - 14000418
Alignment:
Q  329 attgaataccacaagatttatttatattttataaaaagt-ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatc 427  Q
    ||||||||||||||||||| ||| ||  ||  ||||||| |||||||||||||||| || ||||  ||||| |||||||||| ||||||||| |  ||||    
T  14000307 attgaataccacaagattttttt-taaattgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatc 14000405  T
Q  428 tcaatccaataca 440  Q
      |||||||||||    
T  14000406 ctaatccaataca 14000418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 443
Target Start/End: Original strand, 6828801 - 6828876
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||  | || |||| || || ||||||||||| |||||||| |||||||||||||  |||||||||    
T  6828801 ttgattgaatacccaaagacttttttaaaacaaaaaagtcttttaaaatcctttgaaatctcaattgaatacaccc 6828876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 443
Target Start/End: Original strand, 7016938 - 7017013
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||||| || ||||  || ||||||||||||| |||||||||||  ||||   |||||||||||||    
T  7016938 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccc 7017013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 443
Target Start/End: Complemental strand, 21147032 - 21146957
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||||| || ||||  || ||||||||||||| |||||||||||  ||||   |||||||||||||    
T  21147032 ttgattgaataccacacgactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccc 21146957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 421
Target Start/End: Original strand, 16894100 - 16894153
Alignment:
Q  367 tttgattgaataccacatgatttttctataataaaaaagtcttctaaaatccctt 421  Q
    ||||||||||||||||| || |||| ||| ||||||||||||| |||||||||||    
T  16894100 tttgattgaataccacaagaatttt-tatgataaaaaagtcttttaaaatccctt 16894153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 449
Target Start/End: Complemental strand, 6460757 - 6460676
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctcctta 449  Q
    |||||||||||||||| || ||||  || |||||||| |||| |||||||||||  ||||   || ||||||||||||||||    
T  6460757 ttgattgaataccacaagactttttcattataaaaaaatcttttaaaatcccttagaatcatgattcaatacaccctcctta 6460676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 440
Target Start/End: Original strand, 4550498 - 4550570
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    |||||||||||||||| || ||||  ||||| |||||||||| ||||||||| |  ||||  |||||||||||    
T  4550498 ttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 4550570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 40460363 - 40460435
Alignment:
Q  144 tgagattgttgaatgaacattttgttcatatttttaatcaaaaagtctcacaaaatctattccataaaagaat 216  Q
    |||||||||||||||||||| || |   |||||| ||  |||||||||| ||||||||||| || ||||||||    
T  40460363 tgagattgttgaatgaacatgttatgtgtattttcaactaaaaagtctcgcaaaatctattacacaaaagaat 40460435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 40460538 - 40460582
Alignment:
Q  320 attgtcctaattgaataccacaagatttatttatattttataaaa 364  Q
    |||||| | |||||||||||||| ||||||||||||| |||||||    
T  40460538 attgtcttgattgaataccacaatatttatttatattctataaaa 40460582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 135; Significance: 4e-70; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 142 - 447
Target Start/End: Complemental strand, 27198573 - 27198267
Alignment:
Q  142 tgtgagattgttgaatgaacattttgttcatatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaa 241  Q
    ||||||||||||||||||  |||||||||||||||||||  || ||||||||||||||| | || |||||||||||||| |||||||||  |||||||||    
T  27198573 tgtgagattgttgaatgagtattttgttcatatttttaactaagaagtctcacaaaatcaactctataaaagaatccattaaaatctatatatttttgaa 27198474  T
Q  242 tatctaaggacattttataagttgtgagaaatcctaattgaataccaacggatttcattgcattgnnnnnnnn-tcataattgtcctaattgaataccac 340  Q
    || | | |||||||||| ||||  |||||||||  |||| |||||||||||||||| ||||  ||         |||| |||||| ||||||||||||||    
T  27198473 taccaatggacattttagaagtaatgagaaatctcaattcaataccaacggatttcgttgcgctgaaaaaagaatcatgattgtcttaattgaataccac 27198374  T
Q  341 aagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    ||||||||||||||||||||||||  ||||||||||||||||| || |||| |||||  |||||||||| ||||||||||| || |||||||||||||||    
T  27198373 aagatttatttatattttataaaagttttgattgaataccacaagacttttttataaacaaaaagtcttttaaaatcccttaaagtctcaatccaataca 27198274  T
Q  441 ccctcct 447  Q
    |||||||    
T  27198273 ccctcct 27198267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 127 - 443
Target Start/End: Complemental strand, 42658031 - 42657714
Alignment:
Q  127 agtctcacaaatttgtgtgagattgttgaatgaacattttgttcatatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaat 226  Q
    |||||||||||||| ||||||||||||||||||  ||| |||||| ||||||||  ||||||||||| |||||| |||||||| ||||||||||||||||    
T  42658031 agtctcacaaatttttgtgagattgttgaatgagtattgtgttcacatttttaactaaaaagtctcataaaatccattccatagaagaatccatcaaaat 42657932  T
Q  227 ctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattgaatacc-aacggatttcattgcattg--nnnnnnnntcataattg 323  Q
    || |  ||||||||||| | | |||||||||||||||||||| |||||||||||||||||| ||| |||||| || |||||          || | ||||    
T  42657931 ct-tagatttttgaataccaatggacattttataagttgtgaaaaatcctaattgaataccaaacagatttcgttacattgaaaaaaaaagtcttgattg 42657833  T
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    || |||||||||||||||||| ||||||||||||||| |||   |||||||||||||||| || |||| |||||| |||||||||| ||||||| |||||    
T  42657832 tcttaattgaataccacaaga-ttatttatattttatgaaagtcttgattgaataccacaagacttttttataattaaaaagtcttttaaaatctcttga 42657734  T
Q  424 aatctcaatccaatacaccc 443  Q
    ||||||||||||||||||||    
T  42657733 aatctcaatccaatacaccc 42657714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 138 - 443
Target Start/End: Original strand, 19007358 - 19007663
Alignment:
Q  138 tttgtgtgagattgttgaatgaacattttgttcatatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttt 237  Q
    ||||||||||||||||| ||||   | || || ||||||||||  |||||||||||||||||| |||||||  ||||||||||||||||||||  | |||    
T  19007358 tttgtgtgagattgttggatgagagtattatttatatttttaactaaaaagtctcacaaaatccattccatccaagaatccatcaaaatctatagacttt 19007457  T
Q  238 tgaatatctaaggacattttataagttgtgagaaatcctaattgaataccaacggatttcattgcattgnnnnnnnntcataattgtcctaattgaatac 337  Q
    | |||| | |  |||| || ||||||  |||||||||  ||||||||||||||||||||  |||| ||         ||||  ||||| | |||||||||    
T  19007458 ttaataccaatagacaattcataagtcatgagaaatctcaattgaataccaacggattttgttgccttaaaaaaaagtcatgtttgtcttgattgaatac 19007557  T
Q  338 cacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaat 437  Q
    |||||||||| |||| |||||||||||   |||||||||||||||  || ||||  || ||||||||||||| |||||||||||||||||||||| ||||    
T  19007558 cacaagatttgtttacattttataaaagtcttgattgaataccactagactttttcattataaaaaagtcttttaaaatcccttgaaatctcaattcaat 19007657  T
Q  438 acaccc 443  Q
    ||||||    
T  19007658 acaccc 19007663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 171 - 443
Target Start/End: Complemental strand, 48203621 - 48203348
Alignment:
Q  171 atatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgaga 270  Q
    ||||||||||  |||||||||||||||||| |||||||  ||||||||||||||||||||  | ||||||||| ||| ||||| || ||||||  |||||    
T  48203621 atatttttaactaaaaagtctcacaaaatccattccatccaagaatccatcaaaatctatagacttttgaatacctatggacaattcataagtcatgaga 48203522  T
Q  271 aatcctaattgaataccaacggatttcattgcatt-gnnnnnnnntcataattgtcctaattgaataccacaagatttatttatattttataaaaagttt 369  Q
    ||||  ||||||||||||||||||||  |||| ||          |||| |||||| | ||||||||||||||||||| ||||||||||||||||   ||    
T  48203521 aatctcaattgaataccaacggattttgttgccttaaaaaaaaagtcatgattgtcttgattgaataccacaagatttgtttatattttataaaagtctt 48203422  T
Q  370 gattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||  || ||||  ||  |||||||||||| ||||||||||||||||| |||| ||||||||||    
T  48203421 gattgaataccactagactttttcattctaaaaaagtcttttaaaatcccttgaaatcccaattcaatacaccc 48203348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 171 - 443
Target Start/End: Complemental strand, 48194863 - 48194590
Alignment:
Q  171 atatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgaga 270  Q
    ||||||||||  |||||||||||||||||| |||||||  ||||||||||||||||||||  | ||||||||| | | ||||| || ||||||  |||||    
T  48194863 atatttttaactaaaaagtctcacaaaatccattccatccaagaatccatcaaaatctatagacttttgaataccaatggacaattcataagtcatgaga 48194764  T
Q  271 aatcctaattgaataccaacggatttcattgcatt-gnnnnnnnntcataattgtcctaattgaataccacaagatttatttatattttataaaaagttt 369  Q
    ||||  ||||||||||||||||||||  |||| ||          |||| |||||| | ||||||||||||||||||| |||| |||||||||||   ||    
T  48194763 aatctcaattgaataccaacggattttgttgccttaaaaaaaaagtcatgattgtcttgattgaataccacaagatttgtttagattttataaaagtctt 48194664  T
Q  370 gattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||  || ||||  ||  |||||||||||| ||||||||||||||||| |||| ||||||||||    
T  48194663 gattgaataccactagactttttcattctaaaaaagtcttttaaaatcccttgaaatcccaattcaatacaccc 48194590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 330 - 453
Target Start/End: Complemental strand, 19893564 - 19893441
Alignment:
Q  330 ttgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctc 429  Q
    ||||||||||  ||||||||| ||||| |||||||| |||||||||||||  || ||||||| ||| || |||||||||| ||||||||||| ||||||     
T  19893564 ttgaataccatgagatttattaatattctataaaaaatttgattgaatactccaagatttttttatcattaaaaagtcttttaaaatcccttaaaatctt 19893465  T
Q  430 aatccaatacaccctccttaattt 453  Q
    ||| |||||||||| ||| |||||    
T  19893464 aattcaatacacccacctaaattt 19893441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 342 - 449
Target Start/End: Original strand, 51826819 - 51826926
Alignment:
Q  342 agatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacac 441  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||| ||| || |||||||||| ||||||||||| |||||| ||| ||||||||    
T  51826819 agatttatttatgttttataaaagtcttgattgaataccacaagatttttttattattaaaaagtcttttaaaatcccttcaaatcttaattcaatacac 51826918  T
Q  442 cctcctta 449  Q
     |||||||    
T  51826919 tctcctta 51826926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 183 - 442
Target Start/End: Original strand, 14555134 - 14555394
Alignment:
Q  183 aaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattga 282  Q
    |||||||||||||||||| |||| ||  |||||| |||||||||||||  | ||||||||| | |  |||| |||| ||||  |||||||||  ||||||    
T  14555134 aaaaagtctcacaaaatccattcaatccaagaattcatcaaaatctatagacttttgaataccaagagacaatttacaagtcatgagaaatctcaattga 14555233  T
Q  283 ataccaacggatttcattgcattgnnnnnnnn-tcataattgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaatacca 381  Q
    ||| ||||||| ||  |||   ||         |||| |||||| ||||||||||||||||  ||| ||||||||||||||||   ||||||||||||||    
T  14555234 atatcaacggaattggttgtcctgaaataaaagtcatgattgtcttaattgaataccacaaattttttttatattttataaaagtcttgattgaatacca 14555333  T
Q  382 catgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacacc 442  Q
    |   | |||| ||| ||||||||||||| |||||||| || ||||  ||||||||||||||    
T  14555334 ccaaacttttttattataaaaaagtcttttaaaatccttttaaattacaatccaatacacc 14555394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 324 - 443
Target Start/End: Original strand, 26882791 - 26882910
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  |||| |||   ||||||  ||||||||||| |||| || |||| || || ||||||||||| |||||||| ||||    
T  26882791 tcctaattgaataccacaagaatgttttacattccttaaaaatcttgattgaataacacaagacttttataaaacaaaaaagtcttttaaaatcctttga 26882890  T
Q  424 aatctcaatccaatacaccc 443  Q
    ||||||||||||||||||||    
T  26882891 aatctcaatccaatacaccc 26882910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 250 - 443
Target Start/End: Complemental strand, 43553729 - 43553536
Alignment:
Q  250 gacattttataagttgtgagaaatcctaattgaataccaacggatttcattgcattgnnnnnnnntcataattgtcctaattgaataccacaagatttat 349  Q
    |||| ||||||||||||||||||||  |||||||| | ||||||||| ||| | ||         || | |||||| ||||||||||| |||||||||||    
T  43553729 gacaatttataagttgtgagaaatctcaattgaatgctaacggattttattaccttcaaatgaagtcttgattgtcgtaattgaatacaacaagatttat 43553630  T
Q  350 ttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    ||| |||||||||||   || |||| |||||||| || |||| ||| || |||| ||||  ||||||| |||||||||| ||| ||||||||||    
T  43553629 ttaaattttataaaagtcttaattgtataccacaagacttttttattatgaaaatgtctattaaaatctcttgaaatcttaattcaatacaccc 43553536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 324 - 449
Target Start/End: Complemental strand, 45318579 - 45318454
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||| | |  |||| |||   ||||||  |||||||||||||| | || |||| || || ||||||||||| |||||||| ||||    
T  45318579 tcctaattgaataccacaataatgttttacattccttaaaaatcttgattgaataccagaagacttttataaaacaaaaaagtcttttaaaatcctttga 45318480  T
Q  424 aatctcaatccaatacaccctcctta 449  Q
    |||||||||||||||||||| |||||    
T  45318479 aatctcaatccaatacacccccctta 45318454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 320 - 440
Target Start/End: Original strand, 52179652 - 52179772
Alignment:
Q  320 attgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatccc 419  Q
    |||||| ||||||||||||||||||||||||||||||||||||||   || |||||||||| |  || |||| |||  ||||||  | || ||||||||     
T  52179652 attgtcttaattgaataccacaagatttatttatattttataaaagtctttattgaatacctctagacttttttattctaaaaagctattttaaaatcct 52179751  T
Q  420 ttgaaatctcaatccaataca 440  Q
    |||||||||| ||||||||||    
T  52179752 ttgaaatctcgatccaataca 52179772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 315 - 443
Target Start/End: Original strand, 14229007 - 14229136
Alignment:
Q  315 tcataattgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttcta-taataaaaaagtcttctaa 413  Q
    |||| |||||| ||||| |||||||| |||||| ||| ||||||||||||   |||||||||||||||   | |||| || ||  ||||||||||| |||    
T  14229007 tcatgattgtcttaattcaataccacgagatttctttgtattttataaaagtcttgattgaataccactaaacttttttactataaaaaaagtcttttaa 14229106  T
Q  414 aatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||| ||||| |||||||||    
T  14229107 aatcccttgaaatcacaatcaaatacaccc 14229136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 324 - 449
Target Start/End: Complemental strand, 52705512 - 52705387
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  |||| |||   ||||||  |||||||||||||||| || |||| || || |||||| |||| |||||||  ||||    
T  52705512 tcctaattgaataccacaagaatgttttacattccttaaaaatcttgattgaataccacaagacttttataaaacaaaaaaatcttttaaaatcttttga 52705413  T
Q  424 aatctcaatccaatacaccctcctta 449  Q
    |||||||||  |||||||||||||||    
T  52705412 aatctcaattgaatacaccctcctta 52705387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 329 - 440
Target Start/End: Complemental strand, 49230883 - 49230772
Alignment:
Q  329 attgaataccacaagatttatttatattttataaaaagt-ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatc 427  Q
    |||||||||||||||| || ||| || |||  ||||||| ||||||||||||||||||| ||||  ||||| |||||||||| ||||||||| | |||||    
T  49230883 attgaataccacaagactttttt-taatttgcaaaaagtcttgattgaataccacatgactttttcataattaaaaagtcttttaaaatcccataaaatc 49230785  T
Q  428 tcaatccaataca 440  Q
      |||||||||||    
T  49230784 ctaatccaataca 49230772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 447
Target Start/End: Complemental strand, 9191250 - 9191127
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    |||||||||||||||||  || |||||| || | | | ||||  ||||||||||| | || |||||||||||||  |||||||||| ||||||   |  |    
T  9191250 tcctaattgaataccaccggaattatttctaatcttttaaaatcttgattgaataactcaagatttttctataaccaaaaagtcttttaaaatttttcca 9191151  T
Q  424 aatctcaatccaatacaccctcct 447  Q
    ||||||||||||||||||||||||    
T  9191150 aatctcaatccaatacaccctcct 9191127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 440
Target Start/End: Complemental strand, 39758096 - 39757984
Alignment:
Q  327 taattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaat 426  Q
    ||||||||||||||||||||||| || |||| ||||||   |||||| ||||| ||| ||||||| ||| ||||||| || |   ||||||| |||||||    
T  39758096 taattgaataccacaagatttatatagatttaataaaagtcttgattcaatacgacaagatttttttatcataaaaa-gtatatcaaaatcctttgaaat 39757998  T
Q  427 ctcaatccaataca 440  Q
    |||||| |||||||    
T  39757997 ctcaattcaataca 39757984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 296
Target Start/End: Complemental strand, 39758232 - 39758120
Alignment:
Q  183 aaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattga 282  Q
    ||||||||||||| |||| |||||  ||| |||||||| |||||||  ||  |||| |||| | || ||||||||||||||| | ||||||| |||||||    
T  39758232 aaaaagtctcacacaatccattccccaaatgaatccattaaaatctg-catattttcaataccaaaagacattttataagttcttagaaatcttaattga 39758134  T
Q  283 ataccaacggattt 296  Q
    |||||||| |||||    
T  39758133 ataccaacagattt 39758120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 440
Target Start/End: Complemental strand, 39763450 - 39763338
Alignment:
Q  327 taattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaat 426  Q
    ||||||||||||||||||||||| || |||| ||||||   |||||| ||||| ||| ||||||| ||| ||||||| || |   ||||||| |||||||    
T  39763450 taattgaataccacaagatttatatagatttaataaaagtcttgattcaatacgacaagatttttttatcataaaaa-gtatatcaaaatcctttgaaat 39763352  T
Q  427 ctcaatccaataca 440  Q
    |||||| |||||||    
T  39763351 ctcaattcaataca 39763338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 296
Target Start/End: Complemental strand, 39763586 - 39763474
Alignment:
Q  183 aaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattga 282  Q
    ||||||||||||| |||| |||||  ||| |||||||| |||||||  ||  |||| |||| | || ||||||||||||||| | ||||||| |||||||    
T  39763586 aaaaagtctcacacaatccattccccaaatgaatccattaaaatctg-catattttcaataccaaaagacattttataagttcttagaaatcttaattga 39763488  T
Q  283 ataccaacggattt 296  Q
    |||||||| |||||    
T  39763487 ataccaacagattt 39763474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 443
Target Start/End: Complemental strand, 10896919 - 10896800
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  |||| |||   |||||   |||||||||||||  | || |||| || ||||||||| |||| |||||||| ||||    
T  10896919 tcctaattgaataccacaagaatgttttagattccttaaaagtcttgattgaatacctaaagacttttttaaaataaaaaaatcttttaaaatcctttga 10896820  T
Q  424 aatctcaatccaatacaccc 443  Q
    |||||||||  |||||||||    
T  10896819 aatctcaattgaatacaccc 10896800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 35679370 - 35679449
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctcct 447  Q
    |||||||||||||||| || ||||  || ||||||||||||| ||||||||||| |||||   || ||||||||||||||    
T  35679370 ttgattgaataccacaagactttttcattataaaaaagtcttttaaaatcccttaaaatcatgattcaatacaccctcct 35679449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 443
Target Start/End: Complemental strand, 36402366 - 36402247
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  |||| |||   |||||   |||||||||||||  | || |||| || || ||||||||||| |||||||| ||||    
T  36402366 tcctaattgaataccacaagaatgttttagattccttaaaagtcttgattgaatacctaaagacttttttaaaacaaaaaagtcttttaaaatcctttga 36402267  T
Q  424 aatctcaatccaatacaccc 443  Q
    |||||||||  |||||||||    
T  36402266 aatctcaattgaatacaccc 36402247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 445
Target Start/End: Complemental strand, 9831375 - 9831297
Alignment:
Q  367 tttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctc 445  Q
    ||||||||||||||  | || |||| || || ||||||||||| |||||||| |||||||||||||  |||||||||||    
T  9831375 tttgattgaatacctaaagacttttttaaaacaaaaaagtcttttaaaatcctttgaaatctcaattgaatacaccctc 9831297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 442
Target Start/End: Original strand, 28039377 - 28039490
Alignment:
Q  329 attgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatct 428  Q
    |||||| |||| ||||||||||||||||||||||||  ||| |||||||| | || ||  ||| |||  | ||||| |||| || |||||| ||||||||    
T  28039377 attgaacaccataagatttatttatattttataaaagttttaattgaatatctcaagacctttttatttttaaaaattcttttataatcccatgaaatct 28039476  T
Q  429 caatccaatacacc 442  Q
    ||||  ||||||||    
T  28039477 caattgaatacacc 28039490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 398 - 443
Target Start/End: Complemental strand, 34772356 - 34772311
Alignment:
Q  398 taaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||| |||||||| |||||||| |||||||||||||||    
T  34772356 taaaaaagtcttttaaaatcctttgaaatcacaatccaatacaccc 34772311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 25612115 - 25612043
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    |||||||||||||||| |||||||  ||||| |||||||||| ||||||||| |  ||||  |||||||||||    
T  25612115 ttgattgaataccacaagattttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 25612043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 443
Target Start/End: Complemental strand, 953777 - 953702
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||||| || ||||  || ||||||||||||| |||||||||||  ||||   |||||||||||||    
T  953777 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccc 953702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 443
Target Start/End: Original strand, 28824614 - 28824689
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||||| || ||||  || ||||||||||||| |||||||||||  ||||   |||||||||||||    
T  28824614 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccc 28824689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 320 - 378
Target Start/End: Complemental strand, 4289056 - 4288998
Alignment:
Q  320 attgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaata 378  Q
    |||||| | ||||||||||||| |||||||||||||| |||||||   |||||||||||    
T  4289056 attgtcttgattgaataccacatgatttatttatattctataaaagtcttgattgaata 4288998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 228
Target Start/End: Complemental strand, 4289235 - 4289149
Alignment:
Q  142 tgtgagattgttgaatgaacattttgttcatatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatct 228  Q
    |||||||||||||||| | ||| || |   ||||||||   ||||| |||||||||||| | ||||||||||||||||| |||||||    
T  4289235 tgtgagattgttgaataagcatcttatgtgtatttttagctaaaaattctcacaaaatccactccataaaagaatccattaaaatct 4289149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 449
Target Start/End: Original strand, 45760251 - 45760333
Alignment:
Q  367 tttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctcctta 449  Q
    ||||||||||||||||| || ||||  || |||||||| |||| |||||||||||  ||||   ||||||||||||| |||||    
T  45760251 tttgattgaataccacaagactttttcatgataaaaaaatcttttaaaatcccttagaatcatgatccaatacacccccctta 45760333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 228
Target Start/End: Original strand, 51826618 - 51826704
Alignment:
Q  142 tgtgagattgttgaatgaacattttgttcatatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatct 228  Q
    |||||||||||||||||| |||||  |   |||||||||  |||||||||||||||||| | || | || ||||||||| |||||||    
T  51826618 tgtgagattgttgaatgagcatttcatgtgtatttttaactaaaaagtctcacaaaatccactctacaatagaatccattaaaatct 51826704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 453
Target Start/End: Complemental strand, 6312532 - 6312447
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctccttaattt 453  Q
    |||||||||||||||| || ||||  ||||| |||||||||| ||||||||| |  ||||  ||||||||||| || ||| |||||    
T  6312532 ttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaatacatccccctaaattt 6312447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 449
Target Start/End: Complemental strand, 22183328 - 22183247
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctcctta 449  Q
    |||||||||||||||| || ||||  || ||||||||||||| |||||||| ||  ||||   ||||||||||||| |||||    
T  22183328 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcctttagaatcatgatccaatacacccccctta 22183247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 440
Target Start/End: Complemental strand, 45272542 - 45272473
Alignment:
Q  371 attgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    |||||||||||||  ||||||  ||||| |||||||||| ||||||||| |  ||||| |||||||||||    
T  45272542 attgaataccacaatattttttcataattaaaaagtcttttaaaatcccatagaatcttaatccaataca 45272473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 421
Target Start/End: Original strand, 50192793 - 50192846
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatccctt 421  Q
    |||||||||||||||| || ||||  |||||||||||||||| |||||| ||||    
T  50192793 ttgattgaataccacaagactttttcataataaaaaagtcttttaaaattcctt 50192846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 440
Target Start/End: Original strand, 9322742 - 9322814
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    |||||||||||||||| || ||||  ||||| |||||||||| ||||||||| |  ||||  |||||||||||    
T  9322742 ttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 9322814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 14228884 - 14228944
Alignment:
Q  183 aaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaata 243  Q
    |||||||||||||||||| ||| |||  || |||||||||||||||||  | |||||||||    
T  14228884 aaaaagtctcacaaaatccatttcatccaaaaatccatcaaaatctatagacttttgaata 14228944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 440
Target Start/End: Original strand, 15835295 - 15835367
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    |||||||||||||||| || ||||  ||||| |||||||||| ||||||||| |  ||||  |||||||||||    
T  15835295 ttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 15835367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 443
Target Start/End: Complemental strand, 33025471 - 33025395
Alignment:
Q  367 tttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    ||||||||||||||||| |||||||  || ||||||||||||| |||| || |||  ||||   |||||||||||||    
T  33025471 tttgattgaataccacaagattttttcatgataaaaaagtcttttaaattctcttagaatcatgatccaatacaccc 33025395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 125; Significance: 3e-64; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 127 - 382
Target Start/End: Complemental strand, 24318233 - 24317972
Alignment:
Q  127 agtctcacaaatttgtgtgagattgttgaatgaacattttgttcatatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaat 226  Q
    |||||||||||||| ||| |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  24318233 agtctcacaaatttttgtaagattgttgaatgagcattttgttcacatttttaaccaaaaagtctcacaaaatccattccataaaagaatccatcaaaat 24318134  T
Q  227 ctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaa---ttgaat-accaacggatttcattgcattg--nnnnnnnntcataa 320  Q
    ||||||||||||||||| | || |||||||||||||||||||||||||||||   |||||| ||||||||||||| ||||||||          || | |    
T  24318133 ctatcaatttttgaataccgaaagacattttataagttgtgagaaatcctaatttttgaatgaccaacggatttcgttgcattgaaaaaaaatgtcttga 24318034  T
Q  321 ttgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccac 382  Q
    ||| | ||||||| |||||||||||| ||||||||| |||||||   |||||||||||||||    
T  24318033 ttgccttaattgagtaccacaagattaatttatattatataaaagtcttgattgaataccac 24317972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 318 - 443
Target Start/End: Complemental strand, 17790561 - 17790436
Alignment:
Q  318 taattgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatc 417  Q
    ||||| || |||||||||||||||||||||  |||||||||||||||    |||||||||||||||  |||||  ||| || |||||||||| |||||||    
T  17790561 taattatcttaattgaataccacaagattttgttatattttataaaagtcatgattgaataccacaaaattttattatcatcaaaaagtcttttaaaatc 17790462  T
Q  418 ccttgaaatctcaatccaatacaccc 443  Q
     |||||||||||||||||||||||||    
T  17790461 tcttgaaatctcaatccaatacaccc 17790436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 324 - 447
Target Start/End: Complemental strand, 2112910 - 2112787
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  |||| |||   ||||||  |||||||||||||||| || |||| || || ||||||||||| |||||||| ||||    
T  2112910 tcctaattgaataccacaagaatgttttacattccttaaaaatcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctttga 2112811  T
Q  424 aatctcaatccaatacaccctcct 447  Q
    ||||||||||||||||||||||||    
T  2112810 aatctcaatccaatacaccctcct 2112787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 320 - 443
Target Start/End: Complemental strand, 14061669 - 14061546
Alignment:
Q  320 attgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatccc 419  Q
    |||||| | |||||||||||||||||||||||||||| ||||||||  |||||||||||||||| || |||| ||   |||||||||||| |||||| ||    
T  14061669 attgtcttgattgaataccacaagatttatttatattctataaaaatcttgattgaataccacaagacttttttactttaaaaaagtcttttaaaattcc 14061570  T
Q  420 ttgaaatctcaatccaatacaccc 443  Q
     | ||||| |||| ||||||||||    
T  14061569 ataaaatcccaatacaatacaccc 14061546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 183 - 443
Target Start/End: Complemental strand, 42366303 - 42366050
Alignment:
Q  183 aaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattga 282  Q
    ||||||||||||| ||||||||||| ||| |||||||| ||||||| || | |||| |||| | |  |||||||||||||||   |||||||  || |||    
T  42366303 aaaaagtctcacacaatctattccacaaatgaatccattaaaatctgtctaattttcaataccaagagacattttataagttcctagaaatctcaaatga 42366204  T
Q  283 ataccaacggatttcattgcattgnnnnnnnntcataattgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccac 382  Q
    ||||||||| |||||| || |||           | ||  ||| | ||||||||||||| |||||||| | |||||||||||  ||||||||||||||||    
T  42366203 ataccaacgaatttcaatgtatttaaa-------aaaaaagtcttgattgaataccacatgatttattcagattttataaaagttttgattgaataccac 42366111  T
Q  383 atgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
       | |||| ||| |||||||| |||| |||||| | |||||||| |||||||||||||||    
T  42366110 caaacttttttatcataaaaaaatcttttaaaatgctttgaaatcacaatccaatacaccc 42366050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 327 - 443
Target Start/End: Original strand, 1605981 - 1606097
Alignment:
Q  327 taattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaat 426  Q
    |||||||||||||||||| |  |||| |||   ||||||  |||||||||||||||| || |||| || || ||||||||||| |||||||| |||||||    
T  1605981 taattgaataccacaagaatgttttacattccttaaaaatcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctttgaaat 1606080  T
Q  427 ctcaatccaatacaccc 443  Q
    |||||||||||||||||    
T  1606081 ctcaatccaatacaccc 1606097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 324 - 452
Target Start/End: Complemental strand, 28619962 - 28619834
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  |||| |||   ||||||  || |||||||||||||  | |||| || || ||||||||||| |||||||| ||||    
T  28619962 tcctaattgaataccacaagaatgttttacattccttaaaaatcttaattgaataccacaaaacttttataaaacaaaaaagtcttttaaaatcctttga 28619863  T
Q  424 aatctcaatccaatacaccctccttaatt 452  Q
    ||||||||||||||||||||| |||||||    
T  28619862 aatctcaatccaatacacccttcttaatt 28619834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 324 - 443
Target Start/End: Complemental strand, 42275091 - 42274972
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  |||| |||   ||||||  |||||||||||||||| || |||| || || |||||| |||| |||||||| ||||    
T  42275091 tcctaattgaataccacaagaatgttttacattccttaaaaatcttgattgaataccacaagacttttataaaacaaaaaaatcttttaaaatcctttga 42274992  T
Q  424 aatctcaatccaatacaccc 443  Q
    ||||||||||||||||||||    
T  42274991 aatctcaatccaatacaccc 42274972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 324 - 439
Target Start/End: Original strand, 43605329 - 43605444
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  |||| |||   ||||||  |||||||||||||||| || |||| || || ||||||||||| |||||||| ||||    
T  43605329 tcctaattgaataccacaagaatgttttacattccttaaaaatcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctttga 43605428  T
Q  424 aatctcaatccaatac 439  Q
    ||||||||||||||||    
T  43605429 aatctcaatccaatac 43605444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 324 - 449
Target Start/End: Original strand, 40265246 - 40265371
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  |||| |||   ||||||  ||||||||||| |||| || |||| || || ||||||||||| |||||||| ||||    
T  40265246 tcctaattgaataccacaagaatgttttacattccttaaaaatcttgattgaatatcacaagacttttataaaacaaaaaagtcttttaaaatcctttga 40265345  T
Q  424 aatctcaatccaatacaccctcctta 449  Q
    ||| |||||||||||||||| |||||    
T  40265346 aatttcaatccaatacacccccctta 40265371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 324 - 452
Target Start/End: Original strand, 10802736 - 10802863
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    |||||||||||||| |||||| |  |||| ||||| ||||||  |||||||||||||| | || |||| || |||||||||||||| ||||||   ||||    
T  10802736 tcctaattgaatactacaagaatgttttacattttttaaaaatcttgattgaataccagaagacttttataaaataaaaaagtcttttaaaattatttga 10802835  T
Q  424 aatctcaatccaatacaccctccttaatt 452  Q
    ||||||||| |||||||||| ||||||||    
T  10802836 aatctcaattcaatacaccc-ccttaatt 10802863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 332 - 455
Target Start/End: Original strand, 24296625 - 24296748
Alignment:
Q  332 gaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaa 431  Q
    ||||||||| ||||||||||||| | | | ||||   |||||||||||| || |||||||||||||  |||||||||| |||||||  | |||||| |||    
T  24296625 gaataccaccagatttatttataatcttttaaaatcatgattgaatacctcaagatttttctataaccaaaaagtcttttaaaatctttcgaaatcccaa 24296724  T
Q  432 tccaatacaccctccttaatttca 455  Q
    | |||||||||||||||| |||||    
T  24296725 ttcaatacaccctccttagtttca 24296748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 324 - 443
Target Start/End: Original strand, 29260241 - 29260360
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||| ||||||| |  |||| |||   ||||||  |||||||||||||||| || |||| || || ||||||||||| |||||||| || |    
T  29260241 tcctaattgaatatcacaagaatgttttacattccttaaaaatcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctttaa 29260340  T
Q  424 aatctcaatccaatacaccc 443  Q
    ||||||||||||||||||||    
T  29260341 aatctcaatccaatacaccc 29260360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 324 - 443
Target Start/End: Complemental strand, 35142161 - 35142042
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||| | |  |||| |||   |||||| ||||||||||||||||| || |||| || ||  |||||||||| |||||||| || |    
T  35142161 tcctaattgaataccacaaaaatgttttacattccttaaaaattttgattgaataccacaagacttttttaaaacgaaaaagtcttttaaaatccattaa 35142062  T
Q  424 aatctcaatccaatacaccc 443  Q
    ||||||||||||||||||||    
T  35142061 aatctcaatccaatacaccc 35142042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 183 - 443
Target Start/End: Complemental strand, 43489167 - 43488906
Alignment:
Q  183 aaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattga 282  Q
    ||||||||||||| |||| ||| || ||| |||||||| ||||||  || | |||| |||| |    ||||||||||||||| | ||||||| |||||||    
T  43489167 aaaaagtctcacacaatccattacacaaatgaatccattaaaatccgtctaattttcaataccacgagacattttataagttcttagaaatcttaattga 43489068  T
Q  283 ataccaacggatttcattgcattgnnnnnnnn-tcataattgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaatacca 381  Q
    ||||||||||||||   ||  |||         || |||||||| | ||||||||| |||||||||||||| |||  ||||||   |||||| ||||||     
T  43489067 ataccaacggattttgatgtcttgaaaaaaaagtcttaattgtcttgattgaatactacaagatttatttagattccataaaagtcttgattcaatacct 43488968  T
Q  382 catgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    || ||||||  | | ||||||||||||  |||||||| ||||||| ||||| ||||||||||    
T  43488967 caagattttcttttcataaaaaagtctattaaaatcctttgaaatttcaattcaatacaccc 43488906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 368 - 439
Target Start/End: Complemental strand, 7148121 - 7148050
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatac 439  Q
    |||||||||||||||| || |||| || || ||||||||||| |||||||| ||||||||||||||||||||    
T  7148121 ttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctttgaaatctcaatccaatac 7148050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 449
Target Start/End: Complemental strand, 9457618 - 9457537
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctcctta 449  Q
    |||||||||||||||| || |||| || || ||||| ||||| |||||||| |||||||||||||| ||||||||| |||||    
T  9457618 ttgattgaataccacaagacttttataaaacaaaaatgtcttttaaaatcctttgaaatctcaatcgaatacacccccctta 9457537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 449
Target Start/End: Complemental strand, 42937325 - 42937244
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctcctta 449  Q
    |||||||||||||||| || ||||  || ||||||||||||| ||||||||||| |||||   |||||||||||||||||||    
T  42937325 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttaaaatcatgatccaatacaccctcctta 42937244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 443
Target Start/End: Complemental strand, 4655166 - 4655047
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  |||| |||   ||||||  |||||| ||||||||| || |||| |  || |||||| |||| |||||| | ||||    
T  4655166 tcctaattgaataccacaagaatgttttacattccttaaaaatcttgattaaataccacaagacttttattaaacaaaaaaatcttttaaaattctttga 4655067  T
Q  424 aatctcaatccaatacaccc 443  Q
    ||||||||||||||||||||    
T  4655066 aatctcaatccaatacaccc 4655047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 320 - 453
Target Start/End: Complemental strand, 10127649 - 10127518
Alignment:
Q  320 attgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatccc 419  Q
    |||||| | ||||||||||| |||||||  |||||||| ||||||     ||||||||| |||| ||||||  |||| | |||||||||| ||||||| |    
T  10127649 attgtcttgattgaataccaaaagattttgttatatttcataaaagtcaagattgaatagcacaagattttattata-tcaaaaagtcttttaaaatctc 10127551  T
Q  420 ttgaaatctcaatccaatacaccctccttaattt 453  Q
    || ||||||||||| |||||| ||||||||||||    
T  10127550 ttaaaatctcaatctaataca-cctccttaattt 10127518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 368 - 451
Target Start/End: Original strand, 42735518 - 42735601
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctccttaat 451  Q
    |||||||||||||||| || ||||  || ||||||||||||| |||||||||||  ||||   ||||||||||||| |||||||    
T  42735518 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccccccttaat 42735601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 368 - 445
Target Start/End: Original strand, 7507140 - 7507217
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctc 445  Q
    |||||||||||||||| || ||||  || ||||||||||||| |||||||||||  ||||   |||||||||||||||    
T  7507140 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccctc 7507217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 443
Target Start/End: Original strand, 41386879 - 41386955
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaag-tcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||||| || |||| || || ||||||  |||| |||||||  ||||||||||||||||||||||||    
T  41386879 ttgattgaataccacaagacttttataaaacaaaaaaaatcttttaaaatcttttgaaatctcaatccaatacaccc 41386955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 443
Target Start/End: Original strand, 23115409 - 23115484
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||||| || ||||  || ||||||||||||| |||||||||||  ||||   |||||||||||||    
T  23115409 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccc 23115484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 443
Target Start/End: Original strand, 24214832 - 24214907
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||||| || |||| ||| ||||||||||||| |||||||| ||  ||||   |||||||||||||    
T  24214832 ttgattgaataccacaagacttttttatgataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccc 24214907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 14723961 - 14724011
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcc 418  Q
    ||||||||||||  || ||||||||||||| ||||||||||| ||||||||    
T  14723961 ttgattgaatacttcaagatttttctataacaaaaaagtcttttaaaatcc 14724011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 24296475 - 24296537
Alignment:
Q  183 aaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatc 245  Q
    ||||||||| |||||||| |||| |  ||||||||||| |||||||||  |||||||||||||    
T  24296475 aaaaagtcttacaaaatccattctaccaaagaatccattaaaatctatacatttttgaatatc 24296537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 263
Target Start/End: Complemental strand, 14061848 - 14061727
Alignment:
Q  142 tgtgagattgttgaatgaacattttgttcatatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaa 241  Q
    |||||||||||||||| | ||| || |   ||||||||   |||||||||||||||||| | || |||||||||||||| ||||| | |  | |||||||    
T  14061848 tgtgagattgttgaataagcatgttatgtgtatttttagctaaaaagtctcacaaaatccactctataaaagaatccattaaaatttgtatacttttgaa 14061749  T
Q  242 tatctaaggacattttataagt 263  Q
    || | |  ||||||||||||||    
T  14061748 taccaacagacattttataagt 14061727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 421
Target Start/End: Complemental strand, 26373770 - 26373717
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatccctt 421  Q
    |||||||||||||||| || ||||  || ||||||||||||| |||||||||||    
T  26373770 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatccctt 26373717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 441
Target Start/End: Complemental strand, 41479062 - 41478989
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacac 441  Q
    |||||||||||||||| || ||||  || ||||||||||||| |||||||||||  ||||   |||||||||||    
T  41479062 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacac 41478989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 445
Target Start/End: Original strand, 42938358 - 42938435
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctc 445  Q
    |||||||||||||||| || ||||  ||  |||||||||||| ||||||||||| ||||   ||||||||| ||||||    
T  42938358 ttgattgaataccacaagactttttcatggtaaaaaagtcttttaaaatcccttaaaattataatccaataaaccctc 42938435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 440
Target Start/End: Original strand, 43166889 - 43166961
Alignment:
Q  368 ttgattgaataccacatga-tttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    |||||||||||||||| || ||||||| |||| ||||||| || ||||||||| | |||||| |||||||||||    
T  43166889 ttgattgaataccacaagactttttct-taattaaaaagtattttaaaatcccataaaatcttaatccaataca 43166961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 443
Target Start/End: Complemental strand, 9209080 - 9209036
Alignment:
Q  399 aaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    ||||||||||| |||||| | ||||||||||||| ||||||||||    
T  9209080 aaaaaagtcttttaaaattctttgaaatctcaattcaatacaccc 9209036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 440
Target Start/End: Original strand, 14782376 - 14782448
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    |||||||||||||||| || ||||  ||||| |||||||||| ||||||||| |  ||||  |||||||||||    
T  14782376 ttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 14782448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 443
Target Start/End: Original strand, 30382714 - 30382758
Alignment:
Q  399 aaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    ||||||||||| |||||||| |||||||||||||  |||||||||    
T  30382714 aaaaaagtcttttaaaatcctttgaaatctcaattgaatacaccc 30382758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 440
Target Start/End: Complemental strand, 32497487 - 32497376
Alignment:
Q  329 attgaataccacaagatttatttatattttataaaaagt-ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatc 427  Q
    |||||||||||||||| || ||| ||  || |||||||| |||||||||||||||| || ||||  || || |||||||||| ||||||||| |  ||||    
T  32497487 attgaataccacaagactttttt-taagttgtaaaaagtcttgattgaataccacaagactttttcatgattaaaaagtcttttaaaatcccatagaatc 32497389  T
Q  428 tcaatccaataca 440  Q
      |||||||||||    
T  32497388 ctaatccaataca 32497376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 417
Target Start/End: Original strand, 38806849 - 38806937
Alignment:
Q  329 attgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatc 417  Q
    |||||||||||| ||| |||||| || | | | ||||  ||||||||||||| || ||||||| |||||   |||||||||||||||||    
T  38806849 attgaataccaccagacttatttctaatctgttaaaatcttgattgaatacctcaagatttttttataacttaaaagtcttctaaaatc 38806937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 443
Target Start/End: Original strand, 40013510 - 40013554
Alignment:
Q  399 aaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    ||||||||||| |||||| | |||||||||| |||||||||||||    
T  40013510 aaaaaagtcttttaaaattctttgaaatctccatccaatacaccc 40013554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 440
Target Start/End: Original strand, 44726051 - 44726123
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    |||||||||||||||| || ||||  ||||| |||||||||| ||||||||| |  ||||  |||||||||||    
T  44726051 ttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 44726123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 116; Significance: 8e-59; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 143 - 443
Target Start/End: Original strand, 11580 - 11872
Alignment:
Q  143 gtgagattgttgaatgaacattttgttcatatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaat 242  Q
    |||||||||||||||||  | | |||||| ||||||||  |||||||||| ||||||| |||||||||||||||||||||||||| || |||||||||||    
T  11580 gtgagattgttgaatgaggaatgtgttcacatttttaactaaaaagtctctcaaaatccattccataaaagaatccatcaaaatcaattaatttttgaat 11679  T
Q  243 atctaaggacattttataagttgtgagaaatcctaattgaataccaacggatttcattgcattgnnnnnnnntcataattgtcctaattgaataccacaa 342  Q
    | | ||  |||||||||||||||||||||||| |||||||||||||||||||| | ||||||||        | | ||  ||  | ||||||||||| ||    
T  11680 accaaaatacattttataagttgtgagaaatcttaattgaataccaacggattccgttgcattg--------taaaaaaagttttgattgaataccataa 11771  T
Q  343 gatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacacc 442  Q
     ||||| |||||||||||||||   ||||||||||| |||| || |||| ||||||||||||||||| |||||||||| ||||||  |||||||||||||    
T  11772 aatttacttatattttataaaagtcttgattgaatatcacaagacttttttataataaaaaagtcttttaaaatccctagaaatccgaatccaatacacc 11871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 116; Significance: 8e-59; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 143 - 443
Target Start/End: Complemental strand, 3634505 - 3634213
Alignment:
Q  143 gtgagattgttgaatgaacattttgttcatatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaat 242  Q
    |||||||||||||||||  | | |||||| ||||||||  |||||||||| ||||||| |||||||||||||||||||||||||| || |||||||||||    
T  3634505 gtgagattgttgaatgaggaatgtgttcacatttttaactaaaaagtctctcaaaatccattccataaaagaatccatcaaaatcaattaatttttgaat 3634406  T
Q  243 atctaaggacattttataagttgtgagaaatcctaattgaataccaacggatttcattgcattgnnnnnnnntcataattgtcctaattgaataccacaa 342  Q
    | | ||  |||||||||||||||||||||||| |||||||||||||||||||| | ||||||||        | | ||  ||  | ||||||||||| ||    
T  3634405 accaaaatacattttataagttgtgagaaatcttaattgaataccaacggattccgttgcattg--------taaaaaaagttttgattgaataccataa 3634314  T
Q  343 gatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacacc 442  Q
     ||||| |||||||||||||||   ||||||||||| |||| || |||| ||||||||||||||||| |||||||||| ||||||  |||||||||||||    
T  3634313 aatttacttatattttataaaagtcttgattgaatatcacaagacttttttataataaaaaagtcttttaaaatccctagaaatccgaatccaatacacc 3634214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 138 - 443
Target Start/End: Original strand, 46037128 - 46037434
Alignment:
Q  138 tttgtgtgagattgttgaatgaacattttgttcatatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttt 237  Q
    ||||||||||||||||| ||||   | || || ||||||||||  |||||||||||||||||| |||||||  ||||||||||||||||||||  | |||    
T  46037128 tttgtgtgagattgttggatgagagtattatttatatttttaactaaaaagtctcacaaaatccattccatccaagaatccatcaaaatctatagacttt 46037227  T
Q  238 tgaatatctaaggacattttataagttgtgagaaatcctaattgaataccaacggatttcattgcatt-gnnnnnnnntcataattgtcctaattgaata 336  Q
    |||||| | |  |||| || ||||||  |||||||||  ||||||||||||||||||||  |||| ||          |||| |||||| | ||||||||    
T  46037228 tgaataccaatagacaattcataagtcatgagaaatctcaattgaataccaacggattttgttgccttaaaaaaaaagtcatgattgtcttgattgaata 46037327  T
Q  337 ccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaa 436  Q
     |||||||||| |||| |||||||||||   ||||||||||| |||   | ||||  || ||||||||||||| ||||||||| | || ||||||| |||    
T  46037328 tcacaagatttgtttacattttataaaagtcttgattgaatatcactaaactttttaattataaaaaagtcttttaaaatcccattaattctcaattcaa 46037427  T
Q  437 tacaccc 443  Q
    |||||||    
T  46037428 tacaccc 46037434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 324 - 453
Target Start/End: Original strand, 27418607 - 27418736
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  |||| |||   ||||||  |||||||||||||||| || |||| || || ||||||||||| |||||||| ||||    
T  27418607 tcctaattgaataccacaagaatgttttacattccttaaaaatcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctttga 27418706  T
Q  424 aatctcaatccaatacaccctccttaattt 453  Q
    |||||||||||| ||||||| |||||||||    
T  27418707 aatctcaatccagtacaccccccttaattt 27418736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 253 - 438
Target Start/End: Original strand, 9598958 - 9599145
Alignment:
Q  253 attttataagttgtgagaaatcctaattgaataccaacggatttcattgcattgnnnnnnnn-tcataattgtcctaattgaataccacaagatttattt 351  Q
    |||||||||||||||||||||| ||||||| ||| |||||||||| |||||| |         |  | ||| || ||||||||||| |||||||||||||    
T  9598958 attttataagttgtgagaaatcataattgactactaacggatttcgttgcatcgaaaacaaagttttgattatcttaattgaatacaacaagatttattt 9599057  T
Q  352 atattttataaaaagtttgattgaataccacatgatttttctataa-taaaaaagtcttctaaaatcccttgaaatctcaatccaata 438  Q
    | |||||||||||   |||||||||||| ||| || |||| ||||| ||||||||| || ||||||| ||| ||||||||||||||||    
T  9599058 aaattttataaaattcttgattgaatactacaagacttttttataattaaaaaagttttttaaaatctcttaaaatctcaatccaata 9599145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 253 - 438
Target Start/End: Original strand, 9826529 - 9826716
Alignment:
Q  253 attttataagttgtgagaaatcctaattgaataccaacggatttcattgcattgnnnnnnnn-tcataattgtcctaattgaataccacaagatttattt 351  Q
    |||||||||||||||||||||| ||||||| ||| |||||||||| |||||| |         |  | ||| || ||||||||||| |||||||||||||    
T  9826529 attttataagttgtgagaaatcataattgactactaacggatttcgttgcatcgaaaacaaagttttgattatcttaattgaatacaacaagatttattt 9826628  T
Q  352 atattttataaaaagtttgattgaataccacatgatttttctataa-taaaaaagtcttctaaaatcccttgaaatctcaatccaata 438  Q
    | |||||||||||   |||||||||||| ||| || |||| ||||| ||||||||| || ||||||| ||| ||||||||||||||||    
T  9826629 aaattttataaaattcttgattgaatactacaagacttttttataattaaaaaagttttttaaaatctcttaaaatctcaatccaata 9826716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 324 - 449
Target Start/End: Complemental strand, 151977 - 151852
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  |||| |||   ||||||  ||||||||||| |||| || |||| || || ||||||||||| |||||||| ||||    
T  151977 tcctaattgaataccacaagaatgttttacattccttaaaaatcttgattgaatatcacaagacttttataaaacaaaaaagtcttttaaaatcctttga 151878  T
Q  424 aatctcaatccaatacaccctcctta 449  Q
    |||||||||||||||||||| |||||    
T  151877 aatctcaatccaatacacccccctta 151852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 135 - 223
Target Start/End: Original strand, 9825203 - 9825291
Alignment:
Q  135 aaatttgtgtgagattgttgaatgaacattttgttcatatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaa 223  Q
    |||||| ||| |||||||||||| |  ||| |||||| ||||||||| ||||||||||| |||||| |||| |||||||||||||||||    
T  9825203 aaatttttgtaagattgttgaataagtattatgttcacatttttaattaaaaagtctcataaaatccattctataaaagaatccatcaa 9825291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 135 - 223
Target Start/End: Original strand, 10727128 - 10727216
Alignment:
Q  135 aaatttgtgtgagattgttgaatgaacattttgttcatatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaa 223  Q
    |||||| ||| |||||||||||| |  ||| |||||| ||||||||| ||||||||||| |||||| |||| |||||||||||||||||    
T  10727128 aaatttttgtaagattgttgaataagtattatgttcacatttttaattaaaaagtctcataaaatccattctataaaagaatccatcaa 10727216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 31494314 - 31494235
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctcct 447  Q
    ||||||||||||| || |||||||||||||  |||||||||| |||||||| |  ||||| |||||||||||||||||||    
T  31494314 ttgattgaatacctcaagatttttctataaccaaaaagtcttttaaaatccttccaaatcccaatccaatacaccctcct 31494235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 327 - 450
Target Start/End: Original strand, 34115441 - 34115564
Alignment:
Q  327 taattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaat 426  Q
    |||||||||||||  |||||||||||||||  ||||||   |||||||||||| ||| ||||||| ||| || |||||||||| |||||||  |||||||    
T  34115441 taattgaataccatgagatttatttatattccataaaagtcttgattgaatactacaagatttttttatcattaaaaagtcttttaaaatcatttgaaat 34115540  T
Q  427 ctcaatccaatacaccctccttaa 450  Q
     | ||| ||||||| || ||||||    
T  34115541 tttaattcaatacatcccccttaa 34115564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 324 - 427
Target Start/End: Original strand, 35090071 - 35090174
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  ||||||||   |||||| ||||||||||||||||| || |||| || || ||||||||||| |||||||  ||||    
T  35090071 tcctaattgaataccacaagaatgttttatattccttaaaaattttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatctattga 35090170  T
Q  424 aatc 427  Q
    ||||    
T  35090171 aatc 35090174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 320 - 391
Target Start/End: Original strand, 37042524 - 37042595
Alignment:
Q  320 attgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgattttt 391  Q
    |||||| |||||||||||||||| ||| ||||| ||||||||||||  |||||||||||||||| |||||||    
T  37042524 attgtcataattgaataccacaaaattaatttagattttataaaaatcttgattgaataccacaagattttt 37042595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 324 - 443
Target Start/End: Original strand, 47915022 - 47915141
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  |||| |||   | ||||  || ||||||||||||| || |||| || || ||||||||||| ||||||||  |||    
T  47915022 tcctaattgaataccacaagaatgttttacattccttcaaaatcttaattgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctatga 47915121  T
Q  424 aatctcaatccaatacaccc 443  Q
    ||||||||||||||||||||    
T  47915122 aatctcaatccaatacaccc 47915141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 329 - 383
Target Start/End: Complemental strand, 41060099 - 41060045
Alignment:
Q  329 attgaataccacaagatttatttatattttataaaaagtttgattgaataccaca 383  Q
    ||||||||||||||||||||||||||||| |||||||  ||||||||||||||||    
T  41060099 attgaataccacaagatttatttatatttaataaaaatcttgattgaataccaca 41060045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 443
Target Start/End: Original strand, 12253350 - 12253475
Alignment:
Q  318 taattgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatc 417  Q
    |||||||| | ||||||||||| |||||||||||| |||  ||||||   |||||| ||||||  | ||||||  | | ||||||||||||  |||||||    
T  12253350 taattgtcttgattgaataccataagatttatttagattccataaaagtcttgattcaatacctaaagattttcttttcataaaaaagtctattaaaatc 12253449  T
Q  418 ccttgaaatctcaatccaatacaccc 443  Q
    | ||||||||||||| ||||||||||    
T  12253450 ctttgaaatctcaattcaatacaccc 12253475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 329 - 442
Target Start/End: Original strand, 26201532 - 26201644
Alignment:
Q  329 attgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatct 428  Q
    ||||||| |||  |||||||||||||||||||||||   |||| |||||||||||  || ||| ||  || |||||||||| ||||||||||||||||||    
T  26201532 attgaatcccatgagatttatttatattttataaaagtcttgaatgaataccacaatatatttttagcattaaaaagtctt-taaaatcccttgaaatct 26201630  T
Q  429 caatccaatacacc 442  Q
     ||| |||||||||    
T  26201631 taattcaatacacc 26201644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 39784058 - 39783986
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    ||||||||||||||||||| ||||  ||||| |||||||||| ||||||||| |  |||||||||||||||||    
T  39784058 ttgattgaataccacatgactttttcataattaaaaagtcttttaaaatcccatagaatctcaatccaataca 39783986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 288
Target Start/End: Original strand, 42678005 - 42678121
Alignment:
Q  172 tatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaa 271  Q
    |||||||||  ||||||||||| |||||| |||| | |||||||||||| |||||||    ||||||||||| | |  ||||||||||||||||  | ||    
T  42678005 tatttttaactaaaaagtctcataaaatccattctacaaaagaatccattaaaatctgcagatttttgaataccaatagacattttataagttggtacaa 42678104  T
Q  272 atcctaattgaatacca 288  Q
    ||| |||||||||||||    
T  42678105 atcttaattgaatacca 42678121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 439
Target Start/End: Complemental strand, 30110922 - 30110807
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  |||| |||   ||||||  || ||||||||| ||| || |||| || || ||||||||||| |||||| | ||||    
T  30110922 tcctaattgaataccacaagaatgttttacattccttaaaaatcttaattgaatactacaagacttttataaaacaaaaaagtcttttaaaattctttga 30110823  T
Q  424 aatctcaatccaatac 439  Q
    ||||||||||||||||    
T  30110822 aatctcaatccaatac 30110807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 142 - 288
Target Start/End: Original strand, 34115255 - 34115401
Alignment:
Q  142 tgtgagattgttgaatgaacattttgttcatatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaa 241  Q
    |||||||||||||||||| ||| |  |   |||||| ||| |||||||||||||||||| | |  | |||||||||||| ||||||||   |||||||||    
T  34115255 tgtgagattgttgaatgagcatgtcatgtgtattttcaattaaaaagtctcacaaaatccactatacaaaagaatccattaaaatctacagatttttgaa 34115354  T
Q  242 tatctaaggacattttataagttgtgagaaatcctaattgaatacca 288  Q
    || |||   |||||||||||||||  | ||||| | |||||||||||    
T  34115355 tacctataaacattttataagttggtacaaatcttgattgaatacca 34115401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 449
Target Start/End: Complemental strand, 47031361 - 47031239
Alignment:
Q  327 taattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaat 426  Q
    ||||||||||||||  || ||||||||| ||| | ||||  ||||||||||| | || |||||||||||||  ||||||| || |||||||| |  ||||    
T  47031361 taattgaataccaccggaattatttataattttttaaaatcttgattgaatatctcaagatttttctataaccaaaaagttttttaaaatccttcaaaat 47031262  T
Q  427 ctcaatccaatacaccctcctta 449  Q
    | |||| ||||||||||| ||||    
T  47031261 cccaattcaatacacccttctta 47031239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 288
Target Start/End: Original strand, 36355307 - 36355412
Alignment:
Q  183 aaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattga 282  Q
    |||||||||||||||||| |||  || || |||||||| |||||||||  ||||||||||| | ||||||| ||| ||||||| || ||||| | ||| |    
T  36355307 aaaaagtctcacaaaatccattatatcaaggaatccattaaaatctatacatttttgaataacaaaggacaatttttaagttgagaaaaatcttgattta 36355406  T
Q  283 atacca 288  Q
    ||||||    
T  36355407 atacca 36355412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 41060288 - 41060187
Alignment:
Q  142 tgtgagattgttgaatgaacattttgttcatatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaa 241  Q
    |||||||||||||||||||||| || |   |||||||| | ||||||||| |||||||| | || ||||||||||| || |||||||||  | |||||||    
T  41060288 tgtgagattgttgaatgaacatgttatgtgtatttttagttaaaaagtcttacaaaatccactctataaaagaatctattaaaatctatatacttttgaa 41060189  T
Q  242 ta 243  Q
    ||    
T  41060188 ta 41060187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 443
Target Start/End: Original strand, 8116716 - 8116820
Alignment:
Q  339 acaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaata 438  Q
    ||||||||||||||||||| ||||||  ||| |||||||| |||| |||| || ||||||||| || | || ||||||||||  |||| || ||||| ||    
T  8116716 acaagatttatttatatttaataaaagttttaattgaatatcacaagattcttttataataaacaaatattttaaaatccctaaaaatatccatccatta 8116815  T
Q  439 caccc 443  Q
    |||||    
T  8116816 caccc 8116820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 428
Target Start/End: Original strand, 42678155 - 42678263
Alignment:
Q  320 attgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatccc 419  Q
    |||||| | |||||||||||  |||||||||||| ||| ||||||   || |||||||| |||  ||||||| ||| || |||||||||| ||||||| |    
T  42678155 attgtcttgattgaataccatgagatttatttatgtttcataaaagtcttaattgaatatcaccagatttttttatcattaaaaagtcttttaaaatctc 42678254  T
Q  420 ttgaaatct 428  Q
    |||||||||    
T  42678255 ttgaaatct 42678263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 436
Target Start/End: Original strand, 43057646 - 43057758
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||||| |  |||| |||   ||||||  || || ||||| |||| || |||| || || ||||||||||| |||||||| ||||    
T  43057646 tcctaattgaataccacaagaatgttttacattccttaaaaatattaatagaataacacaagacttttataaaacaaaaaagtcttttaaaatcctttga 43057745  T
Q  424 aatctcaatccaa 436  Q
    |||||||||||||    
T  43057746 aatctcaatccaa 43057758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 368 - 443
Target Start/End: Complemental strand, 8078361 - 8078286
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||||| || |||| ||| ||||||||||||| |||||||||||  ||||   |||||||||||||    
T  8078361 ttgattgaataccacaagacttttttatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccc 8078286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 368 - 443
Target Start/End: Complemental strand, 30440762 - 30440687
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||||| |||||||  || ||||||||||||| |||||||||||  ||||   |||||||||||||    
T  30440762 ttgattgaataccacaagattttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccc 30440687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 305
Target Start/End: Original strand, 37042458 - 37042508
Alignment:
Q  255 tttataagttgtgagaaatcctaattgaataccaacggatttcattgcatt 305  Q
    |||||||||||||||||||| ||||||||||| | |||||||| |||||||    
T  37042458 tttataagttgtgagaaatcttaattgaatactaccggatttcgttgcatt 37042508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 443
Target Start/End: Original strand, 37649666 - 37649778
Alignment:
Q  329 attgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatct 428  Q
    |||||||||||  ||||||| |||| || ||| |||||| | ||||||||||||  || |||| ||| || |||||||||| ||||||| ||||||||||    
T  37649666 attgaataccatgagatttacttatgttctat-aaaagtcttattgaataccac-cgaattttttatcattaaaaagtcttttaaaatctcttgaaatct 37649763  T
Q  429 caatccaatacaccc 443  Q
     ||| ||||||||||    
T  37649764 taattcaatacaccc 37649778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 183 - 288
Target Start/End: Original strand, 24939474 - 24939578
Alignment:
Q  183 aaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattga 282  Q
    ||||||||||||||||||||||| || ||  ||| ||| ||||||||| |||||||||||| | || |||  ||| |||||| ||| ||||  |||||||    
T  24939474 aaaaagtctcacaaaatctattctattaagaaattcattaaaatctataaatttttgaata-ccaaagactatttttaagttatgaaaaattttaattga 24939572  T
Q  283 atacca 288  Q
    ||||||    
T  24939573 atacca 24939578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 368 - 421
Target Start/End: Complemental strand, 34695197 - 34695144
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatccctt 421  Q
    |||||||||||||||| || ||||  |||||||||||||||| |||||||||||    
T  34695197 ttgattgaataccacaagactttttcataataaaaaagtcttttaaaatccctt 34695144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 509657 - 509585
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    |||||||||||||||| || ||||  ||||| |||||||||| ||||||||| | |||||  |||||||||||    
T  509657 ttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatccaataca 509585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 445
Target Start/End: Original strand, 24939659 - 24939735
Alignment:
Q  369 tgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctc 445  Q
    |||||||||||| || |||||||||||||  |||||||||| |||||||  | ||| || |||| ||||||||||||    
T  24939659 tgattgaatacctcaagatttttctataaccaaaaagtcttttaaaatctttcgaactcccaatgcaatacaccctc 24939735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 443
Target Start/End: Complemental strand, 40097210 - 40097094
Alignment:
Q  327 taattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaat 426  Q
    |||||||||||||||||| |  |||| |||   |||||   |||||||||||||  | || |||| || || ||||||||||| |||||||| |||||||    
T  40097210 taattgaataccacaagaatgttttagattccttaaaagtcttgattgaatacctaaagacttttttaaaacaaaaaagtcttttaaaatcctttgaaat 40097111  T
Q  427 ctcaatccaatacaccc 443  Q
    ||||||  |||||||||    
T  40097110 ctcaattgaatacaccc 40097094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 449
Target Start/End: Original strand, 44623502 - 44623554
Alignment:
Q  397 ataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctcctta 449  Q
    |||||||| || | ||||||||||| |||||| ||||||||||||||||||||    
T  44623502 ataaaaaaatcgtttaaaatcccttcaaatcttaatccaatacaccctcctta 44623554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 442
Target Start/End: Original strand, 5572538 - 5572637
Alignment:
Q  343 gatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacacc 442  Q
    ||||||||||||||||||||||   ||||||||||| ||   ||  ||| ||| |||||||||  || |||||||| || |||||||||| |||||||||    
T  5572538 gatttatttatattttataaaagtcttgattgaatatcaatggacgtttttattataaaaaagcattttaaaatccattaaaatctcaattcaatacacc 5572637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 31638841 - 31638762
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctcct 447  Q
    ||||||||||||||||||| ||||  || ||||||||||||| ||||||| |||  ||||   || ||||||||||||||    
T  31638841 ttgattgaataccacatgactttttcatgataaaaaagtcttttaaaatctcttagaatcatgattcaatacaccctcct 31638762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 443
Target Start/End: Original strand, 44343637 - 44343712
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||||| || ||||  || ||||||||||||| |||||||||||  ||||   |||||||||||||    
T  44343637 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccc 44343712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 296
Target Start/End: Original strand, 12253281 - 12253327
Alignment:
Q  250 gacattttataagttgtgagaaatcctaattgaataccaacggattt 296  Q
    ||||||||||||||| | ||||||| ||||||||||||||| |||||    
T  12253281 gacattttataagttcttagaaatcttaattgaataccaacagattt 12253327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 379
Target Start/End: Original strand, 46202519 - 46202569
Alignment:
Q  329 attgaataccacaagatttatttatattttataaaaagtttgattgaatac 379  Q
    |||||||||||||| |||||||| |||| ||||||||  ||||||||||||    
T  46202519 attgaataccacaaaatttatttttattctataaaaatcttgattgaatac 46202569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 421
Target Start/End: Original strand, 10676619 - 10676672
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatccctt 421  Q
    |||||| ||||||||| |||||||  ||||| |||||||||| |||||||||||    
T  10676619 ttgattaaataccacaagattttttcataattaaaaagtcttttaaaatccctt 10676672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 421
Target Start/End: Original strand, 18914976 - 18915029
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatccctt 421  Q
    |||||||||||||||| || ||||  || ||||||||||||| |||||||||||    
T  18914976 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatccctt 18915029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 449
Target Start/End: Complemental strand, 28342306 - 28342225
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctcctta 449  Q
    |||||||||||||||| || ||||  ||||| |||||||||| ||||||||| |  ||||  ||||||||||| || |||||    
T  28342306 ttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaatacatccccctta 28342225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 274
Target Start/End: Complemental strand, 32630969 - 32630868
Alignment:
Q  173 atttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaa 272  Q
    ||||||||  |||||||||||||||||| |||  || || |||||||| |||||||||  |||||| | || | ||||||| ||| ||||||| || |||    
T  32630969 atttttaactaaaaagtctcacaaaatccattatatcaaggaatccattaaaatctatacattttttattaccaaaggacaatttttaagttgagaaaaa 32630870  T
Q  273 tc 274  Q
    ||    
T  32630869 tc 32630868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 296
Target Start/End: Complemental strand, 33474782 - 33474669
Alignment:
Q  183 aaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattga 282  Q
    ||||||||||||| |||| ||| || ||| ||||| || ||||||  || | |||| |||| |  | || |||||||||||| | ||||||| |||||||    
T  33474782 aaaaagtctcacacaatccattacacaaatgaatcaattaaaatccgtctaattttcaataccacaagatattttataagttcttagaaatcttaattga 33474683  T
Q  283 ataccaacggattt 296  Q
    ||||||||| ||||    
T  33474682 ataccaacgaattt 33474669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 452
Target Start/End: Original strand, 43057840 - 43057880
Alignment:
Q  411 taaaatcccttgaaatctcaatccaatacaccctccttaatt 452  Q
    |||||||| |||||||||||||||||||||||| ||||||||    
T  43057840 taaaatcctttgaaatctcaatccaatacaccc-ccttaatt 43057880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 449
Target Start/End: Complemental strand, 47914232 - 47914151
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctcctta 449  Q
    |||||||||||||||| || ||||  || ||||| ||||||| |||||||||||  ||||   || ||||||||||||||||    
T  47914232 ttgattgaataccacaagactttttcattataaataagtcttttaaaatcccttagaatcatgattcaatacaccctcctta 47914151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 48999198 - 48999141
Alignment:
Q  173 atttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatctat 230  Q
    ||||||||  |||||||||  ||||||||| || |||||||||||||||| |||||||    
T  48999198 atttttaactaaaaagtctttcaaaatctactctataaaagaatccatcacaatctat 48999141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 7993101 - 7993029
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    |||||||||||||||| || ||||  ||||| |||||||||| ||||||||  |  ||||| |||||||||||    
T  7993101 ttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcctatagaatcttaatccaataca 7993029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 417
Target Start/End: Original strand, 15913381 - 15913469
Alignment:
Q  329 attgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatc 417  Q
    ||||||| |||  ||||||||||||||| |||||||   ||||||||||| || | ||| ||| ||| || |||||||||| |||||||    
T  15913381 attgaatgccatgagatttatttatattctataaaagtcttgattgaatatcataagatgtttttattatcaaaaagtcttttaaaatc 15913469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 320 - 356
Target Start/End: Complemental strand, 21067057 - 21067021
Alignment:
Q  320 attgtcctaattgaataccacaagatttatttatatt 356  Q
    |||||| | ||||||||||||||||||||||||||||    
T  21067057 attgtcttgattgaataccacaagatttatttatatt 21067021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 37327886 - 37327814
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    |||||||||||||||| || ||||  ||||| |||||||||| ||||||||| |  ||||| ||||| |||||    
T  37327886 ttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccattgaatcttaatcctataca 37327814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 440
Target Start/End: Complemental strand, 39028095 - 39027984
Alignment:
Q  329 attgaataccacaagatttatttatattttataaaaagt-ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatc 427  Q
    ||||||||||||||||||| ||| ||  ||  ||||||| |||||||||||||||| || ||||  ||||| |||||||||| |||||| |  | |||||    
T  39028095 attgaataccacaagattttttt-taagttgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaattctataaaatc 39027997  T
Q  428 tcaatccaataca 440  Q
      |||||||||||    
T  39027996 ctaatccaataca 39027984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 456
Target Start/End: Original strand, 39219576 - 39219664
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctccttaatttcat 456  Q
    |||||||||||||||| || ||||  || ||||||||||||| |||||| ||||  |||    |||||||||||||||| || ||||||    
T  39219576 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaattatgatccaatacaccctccgtagtttcat 39219664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 41827273 - 41827201
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    |||||||||||||||| || ||||  ||||| |||||||||| ||||||||| | ||||   |||||||||||    
T  41827273 ttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaattctaatccaataca 41827201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 416
Target Start/End: Original strand, 46405672 - 46405720
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaat 416  Q
    ||||||||||||||||||| ||||  ||||| |||||||||| ||||||    
T  46405672 ttgattgaataccacatgactttttcataattaaaaagtcttttaaaat 46405720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 6e-44; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 137 - 427
Target Start/End: Complemental strand, 709221 - 708931
Alignment:
Q  137 atttgtgtgagattgttgaatgaacattttgttcatatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaattt 236  Q
    |||||||||||||||||| ||||   | || || ||||||||||  |||||||||||||||||| ||| |||  ||||||||||||||||||||  | ||    
T  709221 atttgtgtgagattgttggatgagagtattatttatatttttaactaaaaagtctcacaaaatccattacatccaagaatccatcaaaatctatagactt 709122  T
Q  237 ttgaatatctaaggacattttataagttgtgagaaatcctaattgaataccaacggatttcattgcattgnnnnnnnntcataattgtcctaattgaata 336  Q
    ||||||| | |  |||| || ||||||  ||||||||   ||||||||||||||||||||  |||| |          |||| |||||| | ||||||||    
T  709121 ttgaataccaatagacaattcataagtcatgagaaatttcaattgaataccaacggattttgttgcctcaaaaaaaagtcatgattgtcttgattgaata 709022  T
Q  337 ccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatc 427  Q
    |||||||||||||||| |||||||||||  ||||||||||||||||  |||||||  || ||||||||||||| |||||||||||||||||    
T  709021 ccacaagatttatttacattttataaaagttttgattgaataccactagattttttcattataaaaaagtcttttaaaatcccttgaaatc 708931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 171 - 443
Target Start/End: Complemental strand, 7100437 - 7100164
Alignment:
Q  171 atatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgaga 270  Q
    ||||||||||  |||||||||||||||||| |||||||  ||||||||||||||||||||  | ||||||||| | | ||||| || ||||||  |||||    
T  7100437 atatttttaactaaaaagtctcacaaaatccattccatccaagaatccatcaaaatctatagacttttgaataccaatggacaattcataagtcatgaga 7100338  T
Q  271 aatcctaattgaataccaacggatttcattgcatt-gnnnnnnnntcataattgtcctaattgaataccacaagatttatttatattttataaaaagttt 369  Q
    ||||  ||||||||||||||||||||  |||| ||          |||| |||||| | ||||||||||||||||||| |||| |||||||||||   ||    
T  7100337 aatctcaattgaataccaacggattttgttgccttaaaaaaaaagtcatgattgtcttgattgaataccacaagatttgtttagattttataaaagtctt 7100238  T
Q  370 gattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||  || ||||  ||  |||||||||||| ||||||||||||||||| |||| ||||||||||    
T  7100237 gattgaataccactagactttttcattctaaaaaagtcttttaaaatcccttgaaatcccaattcaatacaccc 7100164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 171 - 443
Target Start/End: Original strand, 8794193 - 8794466
Alignment:
Q  171 atatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgaga 270  Q
    ||||||||||  |||||||||||||||||| |||||||  ||||||||||||||||||||  | ||||||||| | | ||||| || ||||||  |||||    
T  8794193 atatttttaactaaaaagtctcacaaaatccattccatccaagaatccatcaaaatctatagacttttgaataccaatggacaattcataagtcatgaga 8794292  T
Q  271 aatcctaattgaataccaacggatttcattgcatt-gnnnnnnnntcataattgtcctaattgaataccacaagatttatttatattttataaaaagttt 369  Q
    ||||  ||||||||||||||||||||  |||| ||          |||| |||||| | ||||||||||||||||||| |||| |||||||||||   ||    
T  8794293 aatctcaattgaataccaacggattttgttgccttaaaaaaaaagtcatgattgtcttgattgaataccacaagatttgtttagattttataaaagtctt 8794392  T
Q  370 gattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||  || ||||  ||  |||||||||||| ||||||||||||||||| |||| ||||||||||    
T  8794393 gattgaataccactagactttttcattctaaaaaagtcttttaaaatcccttgaaatcccaattcaatacaccc 8794466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 315 - 443
Target Start/End: Complemental strand, 5957254 - 5957126
Alignment:
Q  315 tcataattgtcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaa 414  Q
    |||| |||||| ||||||||||||||||||||| |||| |||||||||||   |||||||||||||||  || |||| ||| ||||||||||||| ||||    
T  5957254 tcatgattgtcttaattgaataccacaagatttgtttacattttataaaagtcttgattgaataccactagacttttttattataaaaaagtcttttaaa 5957155  T
Q  415 atcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||| ||||||| ||||||||||    
T  5957154 atcccttgaattctcaattcaatacaccc 5957126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 342 - 443
Target Start/End: Original strand, 31609675 - 31609776
Alignment:
Q  342 agatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacac 441  Q
    ||||||||||||||| |||||||   |||||||||||||||| ||||||| |||||| |||||||||| |||||||| |||||| ||  || ||||||||    
T  31609675 agatttatttatattctataaaagtcttgattgaataccacaagatttttttataattaaaaagtcttttaaaatccattgaaaacttcattcaatacac 31609774  T
Q  442 cc 443  Q
    ||    
T  31609775 cc 31609776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 443
Target Start/End: Original strand, 29834294 - 29834369
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||||| || |||| || || ||||| ||||| |||||||| |||||||||||||| |||||||||    
T  29834294 ttgattgaataccacaagacttttataaaacaaaaatgtcttttaaaatcctttgaaatctcaatcgaatacaccc 29834369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 443
Target Start/End: Original strand, 29865728 - 29865803
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||||| || |||| || || ||||| ||||| |||||||| |||||||||||||| |||||||||    
T  29865728 ttgattgaataccacaagacttttataaaacaaaaatgtcttttaaaatcctttgaaatctcaatcgaatacaccc 29865803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 443
Target Start/End: Original strand, 3110252 - 3110369
Alignment:
Q  326 ctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaa 425  Q
    ||||||||||||||||| | |  |||| |||   |||||| | ||||||||||||| | ||||||| || || ||||||||||| ||||||   ||||||    
T  3110252 ctaattgaataccacaaaaatgttttacattccttaaaaattatgattgaataccataagatttttataaaacaaaaaagtcttttaaaatattttgaaa 3110351  T
Q  426 tctcaatccaatacaccc 443  Q
    ||| ||||||||||||||    
T  3110352 tctgaatccaatacaccc 3110369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 4653421 - 4653377
Alignment:
Q  320 attgtcctaattgaataccacaagatttatttatattttataaaa 364  Q
    |||||| |||||||||||||||||||||||||| |||||||||||    
T  4653421 attgtcttaattgaataccacaagatttatttacattttataaaa 4653377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 306
Target Start/End: Original strand, 11007622 - 11007670
Alignment:
Q  258 ataagttgtgagaaatcctaattgaataccaacggatttcattgcattg 306  Q
    ||||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  11007622 ataagctgtgagaaatcctaattgaataccaacagatttcgttgcattg 11007670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 443
Target Start/End: Original strand, 6476678 - 6476797
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||||||||| | |  |||| ||||  ||||||  || |||||||||  || || |||| || || |||| |||||| |||||||| ||||    
T  6476678 tcctaattgaataccacaaaaatgttttacatttcttaaaaatcttaattgaatactgcaagacttttataaaacaaaacagtcttttaaaatccattga 6476777  T
Q  424 aatctcaatccaatacaccc 443  Q
    ||| ||||||||||||||||    
T  6476778 aatttcaatccaatacaccc 6476797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 447
Target Start/End: Original strand, 10009608 - 10009721
Alignment:
Q  329 attgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatct 428  Q
    |||||||||||||||||||||||||||| ||||||||  ||||||| ||     | || |||| |||  | |||||||||| |||||| || ||||||||    
T  10009608 attgaataccacaagatttatttatattctataaaaatcttgattgtat-----aagacttttttatttttaaaaagtcttttaaaattccatgaaatct 10009702  T
Q  429 caatccaatacaccctcct 447  Q
    ||||  ||||||| |||||    
T  10009703 caatttaatacacactcct 10009721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 368 - 449
Target Start/End: Original strand, 14262674 - 14262755
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctcctta 449  Q
    |||||||||||||||| |||||||  ||||| |||||||||| ||||||||| |  ||||  ||||||||||| || |||||    
T  14262674 ttgattgaataccacaagattttttcataattaaaaagtcttttaaaatcccgtagaatcctaatccaatacatccccctta 14262755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 183 - 288
Target Start/End: Complemental strand, 35165065 - 35164960
Alignment:
Q  183 aaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattga 282  Q
    ||||||||||||||||||||||  || || |||| ||| |||||||||  ||||||||||| | ||||| | ||| ||||||| || ||||| | ||| |    
T  35165065 aaaaagtctcacaaaatctattatattaaggaattcattaaaatctatatatttttgaataacaaaggataatttttaagttgagaaaaatcttgattta 35164966  T
Q  283 atacca 288  Q
    ||||||    
T  35164965 atacca 35164960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 296
Target Start/End: Complemental strand, 5957401 - 5957277
Alignment:
Q  172 tatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaa 271  Q
    |||||||||  |||||||||||||||||| |||  |  ||| |||  || |||||||||  | ||||||||| | |  |||| || ||||||  ||||||    
T  5957401 tatttttaactaaaaagtctcacaaaatccattatacgaaaaaatatattaaaatctatagacttttgaataccaatagacaattcataagtcatgagaa 5957302  T
Q  272 atcctaattgaataccaacggattt 296  Q
    ||| |||||||||||||||||||||    
T  5957301 atcttaattgaataccaacggattt 5957277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 11006978 - 11007061
Alignment:
Q  99 gttggacagcaaggaaaagaaaattgcgag--tctcacaaatttgtgtgagattgttgaatgaacattttgttcatatttttaa 180  Q
    ||||| ||||| ||||||||||| ||||||  |||| || |||| ||||||||||||||||||  ||| |||||| ||||||||    
T  11006978 gttgggcagcacggaaaagaaaactgcgagagtctctcagatttttgtgagattgttgaatgagtattgtgttcacatttttaa 11007061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 375 - 439
Target Start/End: Original strand, 11007698 - 11007762
Alignment:
Q  375 aataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatac 439  Q
    ||||||||| || |||| |||| | |||||||||| |||||||  ||||||||||||||||||||    
T  11007698 aataccacaagacttttttatatttaaaaagtcttttaaaatcttttgaaatctcaatccaatac 11007762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 443
Target Start/End: Original strand, 2300979 - 2301054
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||||| || ||||  || ||||||||||||| |||||||||||  ||||   |||||||||||||    
T  2300979 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccc 2301054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 302
Target Start/End: Original strand, 10009463 - 10009582
Alignment:
Q  183 aaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaaatcctaattga 282  Q
    |||||||||||||||||  |||||| ||||||||| || ||||||||   | |||||| || | || |||||||||||||||  || ||||| ||  |||    
T  10009463 aaaaagtctcacaaaattcattccacaaaagaatctattaaaatctaaatacttttgactaccaaaagacattttataagttaggaaaaatcttatctga 10009562  T
Q  283 ataccaacggatttcattgc 302  Q
    |||||| | |||||| ||||    
T  10009563 ataccaccagatttcgttgc 10009582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 443
Target Start/End: Complemental strand, 30877927 - 30877852
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||  | || |||| || || ||||||||||| |||||||| |||||||||||||  |||||||||    
T  30877927 ttgattgaatacctaaagacttttttaaaacaaaaaagtcttttaaaatcctttgaaatctcaattgaatacaccc 30877852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 423 - 453
Target Start/End: Original strand, 35165705 - 35165735
Alignment:
Q  423 aaatctcaatccaatacaccctccttaattt 453  Q
    |||||||||||||||||||||||||||||||    
T  35165705 aaatctcaatccaatacaccctccttaattt 35165735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 31895660 - 31895588
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    |||||||||||||||| || ||||  ||||| |||||||||| ||||||||| |  ||||  |||||||||||    
T  31895660 ttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 31895588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 34773373 - 34773301
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    |||||||||||||||| || ||||  ||||| |||||||||| ||||||||| |  ||||  |||||||||||    
T  34773373 ttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatataatcctaatccaataca 34773301  T

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Target: scaffold0016 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 324 - 452
Target Start/End: Original strand, 81747 - 81875
Alignment:
Q  324 tcctaattgaataccacaagatttatttatattttataaaaagtttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttga 423  Q
    ||||||||||||| ||||||| |  |||| |||   ||||||  |||||||||||||||| || |||| || || ||||||||||| |||||||| || |    
T  81747 tcctaattgaatagcacaagaatgttttagattccttaaaaatcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctttaa 81846  T
Q  424 aatctcaatccaatacaccctccttaatt 452  Q
    |||||||||||||||||||| ||||||||    
T  81847 aatctcaatccaatacaccccccttaatt 81875  T

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Target: scaffold0472 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 443
Target Start/End: Original strand, 1697 - 1969
Alignment:
Q  172 tatttttaatcaaaaagtctcacaaaatctattccataaaagaatccatcaaaatctatcaatttttgaatatctaaggacattttataagttgtgagaa 271  Q
    |||||||||  |||||||||||||||||| |||| | |||||||||||| |||||||    ||||||||||| | |  ||||||||||||||||  | ||    
T  1697 tatttttaactaaaaagtctcacaaaatccattctacaaaagaatccattaaaatctgcagatttttgaataccaatagacattttataagttggtacaa 1796  T
Q  272 atcctaattgaataccaacggatttcattgcattgnnnnnnnn-tcataattgtcctaattgaataccacaagatttatttatattttataaaaagtttg 370  Q
    ||| |||||||||||||  ||||||  ||||  |          |  | |||||| | ||||||||| | ||||||||||||| ||| |||||||  ||     
T  1797 atcttaattgaataccatgggatttggttgccctcaataaaaagttttgattgtcttgattgaatactataagatttatttatgtttcataaaaatctta 1896  T
Q  371 attgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    ||||||||||||   |||||| ||| || |||||||||| ||||||| ||| ||||||  || ||||||||||    
T  1897 attgaataccaccaaatttttttattattaaaaagtcttttaaaatctcttaaaatcttgattcaatacaccc 1969  T

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Target: scaffold0237 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 443
Target Start/End: Original strand, 21422 - 21497
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||||||||||| || |||| || || ||||| ||||| |||||||| |||||||||||||| |||||||||    
T  21422 ttgattgaataccacaagacttttataaaacaaaaatgtcttttaaaatcctttgaaatctcaatcgaatacaccc 21497  T

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Target: scaffold0042 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 440
Target Start/End: Original strand, 58276 - 58348
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    |||||||||||||||| || ||||  ||||| |||||||||| ||||||||| || ||||  |||||||||||    
T  58276 ttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatggaatcctaatccaataca 58348  T

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Target: scaffold1504 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 828 - 756
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    |||||||||||||||| || ||||  ||||| |||||||||| ||||||||| |  ||||  |||||||||||    
T  828 ttgattgaataccacaagaatttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 756  T

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Target: scaffold0543 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 10525 - 10453
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaataca 440  Q
    |||||||||||||||| || ||||  ||||| |||||||||| ||||||||| |  ||||  |||||||||||    
T  10525 ttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 10453  T

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Target: scaffold0153 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 443
Target Start/End: Original strand, 34842 - 34886
Alignment:
Q  399 aaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccc 443  Q
    |||||||| || |||||||| || |||||||||||||||||||||    
T  34842 aaaaaagtattttaaaatcctttaaaatctcaatccaatacaccc 34886  T

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Target: scaffold0113 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 452
Target Start/End: Original strand, 39095 - 39178
Alignment:
Q  368 ttgattgaataccacatgatttttctataataaaaaagtcttctaaaatcccttgaaatctcaatccaatacaccctccttaatt 452  Q
    |||||||||||||||| || ||||  || ||||||||||||| |||||||| ||  ||||   ||||||||||||| ||||||||    
T  39095 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatccattagaatcatgatccaatacaccc-ccttaatt 39178  T

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