View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17517_high_9 (Length: 231)
Name: NF17517_high_9
Description: NF17517
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17517_high_9 |
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Alignment Details
Target: chr3 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 15 - 215
Target Start/End: Complemental strand, 26720 - 26520
Alignment:
| Q |
15 |
tatcatgtagtttactgaatgtggaaagtgtgatagatgatgatgcatgtgaattagtcagtggagaggagctttcattagaggatggcgatgataatgt |
114 |
Q |
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| T |
26720 |
tatcatgtagtttactgaatgtggaaagtgtgatagatgatgatgcatgtgaattagtcagtggagaggagctttcgttagaggatggcgatgataatgt |
26621 |
T |
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| Q |
115 |
tcatgcttatcttttcaaggcagtaaaaaataacaatggaattggcctattgcttctttctgatgtttatgggtttgaggactcctccacaagagatttt |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26620 |
tcatgcttatcttttcaaggcagtaaaaaataacaatggaattggcctattgcttctttctgatgtttatgggtttgaggactcctccacaagagatttt |
26521 |
T |
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| Q |
215 |
g |
215 |
Q |
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| T |
26520 |
g |
26520 |
T |
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