View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17519_low_1 (Length: 491)

Name: NF17519_low_1
Description: NF17519
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17519_low_1
NF17519_low_1
[»] chr4 (5 HSPs)
chr4 (195-274)||(9458663-9458742)
chr4 (74-113)||(22405303-22405342)
chr4 (147-216)||(52413621-52413690)
chr4 (114-146)||(53993662-53993694)
chr4 (114-146)||(53994468-53994500)
[»] chr1 (7 HSPs)
chr1 (53-112)||(45384485-45384544)
chr1 (156-244)||(1477956-1478044)
chr1 (156-244)||(35597501-35597589)
chr1 (149-208)||(34082900-34082959)
chr1 (153-211)||(1159071-1159129)
chr1 (116-149)||(29981265-29981298)
chr1 (147-211)||(1478551-1478615)
[»] chr8 (3 HSPs)
chr8 (114-153)||(5389664-5389703)
chr8 (114-146)||(5390188-5390220)
chr8 (116-148)||(39296737-39296769)
[»] chr6 (5 HSPs)
chr6 (114-153)||(13225243-13225282)
chr6 (114-146)||(11324750-11324782)
chr6 (114-146)||(13220880-13220912)
chr6 (164-221)||(10092432-10092489)
chr6 (157-209)||(24624565-24624617)
[»] chr5 (3 HSPs)
chr5 (16-103)||(19186488-19186570)
chr5 (114-148)||(42948196-42948230)
chr5 (116-152)||(8609193-8609229)
[»] chr3 (8 HSPs)
chr3 (114-153)||(15269696-15269735)
chr3 (114-153)||(40872914-40872953)
chr3 (114-146)||(15274071-15274103)
chr3 (114-145)||(40877291-40877322)
chr3 (116-153)||(31897997-31898034)
chr3 (116-153)||(31913706-31913743)
chr3 (116-153)||(31947354-31947391)
chr3 (147-183)||(7772015-7772051)
[»] chr7 (8 HSPs)
chr7 (156-244)||(47171369-47171457)
chr7 (230-269)||(10233223-10233262)
chr7 (147-211)||(9268888-9268952)
chr7 (114-146)||(12263381-12263413)
chr7 (114-153)||(16664224-16664263)
chr7 (114-153)||(17638594-17638633)
chr7 (159-208)||(40461922-40461971)
chr7 (356-404)||(10233346-10233394)
[»] chr2 (4 HSPs)
chr2 (116-153)||(528902-528939)
chr2 (164-244)||(3666868-3666948)
chr2 (114-146)||(8194294-8194326)
chr2 (159-208)||(18883873-18883922)
[»] scaffold1862 (1 HSPs)
scaffold1862 (147-216)||(31-100)


Alignment Details
Target: chr4 (Bit Score: 64; Significance: 9e-28; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 9458663 - 9458742
Alignment:
Q  195 actaaatctcaaccgtttaatttagttgattgtgcggtttaaattatatcaccacaataaataaaaagaacacatagcac 274  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  9458663 actaaatttcaaccgtttaatttagttgatcgtgcggtttaaattatatcaccacaagaaataaaaagaacacattgcac 9458742  T

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Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 22405303 - 22405342
Alignment:
Q  74 acaaccattaattattattaaaatcaaaggtcaagatttg 113  Q
    |||||||||||||||||||||||| || ||||||||||||    
T  22405303 acaaccattaattattattaaaatgaatggtcaagatttg 22405342  T

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Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 52413690 - 52413621
Alignment:
Q  147 atatatagacaggatcagttgacatcaggtgtaagtcatttgacttatactaaatctcaaccgtttaatt 216  Q
    ||||| |||||||||| ||||||| ||||||||||||    |||||| || |||||||||||| ||||||    
T  52413690 atatagagacaggatccgttgacaccaggtgtaagtccaaagacttacaccaaatctcaaccgcttaatt 52413621  T

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Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 146
Target Start/End: Complemental strand, 53993694 - 53993662
Alignment:
Q  114 agacttactcttggagtcaatggatcccttctc 146  Q
    ||||||||||||||||| |||||||||||||||    
T  53993694 agacttactcttggagttaatggatcccttctc 53993662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 146
Target Start/End: Original strand, 53994468 - 53994500
Alignment:
Q  114 agacttactcttggagtcaatggatcccttctc 146  Q
    |||||||||| ||||||||||||||||||||||    
T  53994468 agacttactcctggagtcaatggatcccttctc 53994500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 8e-16; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 45384544 - 45384485
Alignment:
Q  53 taaggattaatgcaatagattacaaccattaattattattaaaatcaaaggtcaagattt 112  Q
    |||||||||||||||||||| | ||| |||||||||||||||||| ||||||||||||||    
T  45384544 taaggattaatgcaatagatcataacaattaattattattaaaattaaaggtcaagattt 45384485  T

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Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 1477956 - 1478044
Alignment:
Q  156 caggatcagttgacatcaggtgtaagtcatttgacttatactaaatctcaaccgtttaatttagttgattgtgcggtttaaattatatc 244  Q
    ||||||| ||||||| |||||||||||||   |||||| || |||||| ||||||| |||||| ||||| ||  |||||||||||||||    
T  1477956 caggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatcttaaccgttaaatttaattgatcgtatggtttaaattatatc 1478044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 35597589 - 35597501
Alignment:
Q  156 caggatcagttgacatcaggtgtaagtcatttgacttatactaaatctcaaccgtttaatttagttgattgtgcggtttaaattatatc 244  Q
    ||||||| ||||||| |||||||||||||   || ||| || |||||| ||||||| |||||| ||||| ||  |||||||||||||||    
T  35597589 caggatccgttgacaccaggtgtaagtcaaaagatttacaccaaatcttaaccgttaaatttaattgatcgtatggtttaaattatatc 35597501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 34082959 - 34082900
Alignment:
Q  149 atatagacaggatcagttgacatcaggtgtaagtcatttgacttatactaaatctcaacc 208  Q
    ||||||||| |||| |||||||  |||||||||||||| |||||| || |||||||||||    
T  34082959 atatagacaagatccgttgacactaggtgtaagtcattagacttacaccaaatctcaacc 34082900  T

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Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 1159071 - 1159129
Alignment:
Q  153 agacaggatcagttgacatcaggtgtaagtcatttgacttatactaaatctcaaccgtt 211  Q
    |||||| ||| |||||||||||||||||||||   |||||| || ||||||||||||||    
T  1159071 agacagtatccgttgacatcaggtgtaagtcaaaagacttacaccaaatctcaaccgtt 1159129  T

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Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 149
Target Start/End: Complemental strand, 29981298 - 29981265
Alignment:
Q  116 acttactcttggagtcaatggatcccttctcata 149  Q
    |||||||||| |||||||||||||||||||||||    
T  29981298 acttactcttagagtcaatggatcccttctcata 29981265  T

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Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 1478615 - 1478551
Alignment:
Q  147 atatatagacaggatcagttgacatcaggtgtaagtcatttgacttatactaaatctcaaccgtt 211  Q
    ||||| || ||||||| ||||||| |||||||||||||   |||||| || ||||||||||||||    
T  1478615 atatagagtcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatctcaaccgtt 1478551  T

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Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 153
Target Start/End: Complemental strand, 5389703 - 5389664
Alignment:
Q  114 agacttactcttggagtcaatggatcccttctcatatata 153  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5389703 agacttactcttggagtcaatggatcccttctcatatata 5389664  T

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Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 146
Target Start/End: Original strand, 5390188 - 5390220
Alignment:
Q  114 agacttactcttggagtcaatggatcccttctc 146  Q
    ||||||||||| |||||||||||||||||||||    
T  5390188 agacttactctaggagtcaatggatcccttctc 5390220  T

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Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 116 - 148
Target Start/End: Complemental strand, 39296769 - 39296737
Alignment:
Q  116 acttactcttggagtcaatggatcccttctcat 148  Q
    |||||||||||||||||||||||| ||||||||    
T  39296769 acttactcttggagtcaatggatcacttctcat 39296737  T

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Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 153
Target Start/End: Original strand, 13225243 - 13225282
Alignment:
Q  114 agacttactcttggagtcaatggatcccttctcatatata 153  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13225243 agacttactcttggagtcaatggatcccttctcatatata 13225282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 146
Target Start/End: Complemental strand, 11324782 - 11324750
Alignment:
Q  114 agacttactcttggagtcaatggatcccttctc 146  Q
    |||||||||||||||||||||||||||||||||    
T  11324782 agacttactcttggagtcaatggatcccttctc 11324750  T

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Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 146
Target Start/End: Complemental strand, 13220912 - 13220880
Alignment:
Q  114 agacttactcttggagtcaatggatcccttctc 146  Q
    |||||||||||||||||||||||||||||||||    
T  13220912 agacttactcttggagtcaatggatcccttctc 13220880  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 10092489 - 10092432
Alignment:
Q  164 gttgacatcaggtgtaagtcatttgacttatactaaatctcaaccgtttaatttagtt 221  Q
    ||||||| ||| ||||||||||  |||||| |||||||||||||| || |||||||||    
T  10092489 gttgacaccagatgtaagtcataagacttacactaaatctcaaccattaaatttagtt 10092432  T

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Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 157 - 209
Target Start/End: Original strand, 24624565 - 24624617
Alignment:
Q  157 aggatcagttgacatcaggtgtaagtcatttgacttatactaaatctcaaccg 209  Q
    |||||| |||||||| |||||||||| ||| |||||| || ||||||||||||    
T  24624565 aggatctgttgacattaggtgtaagtaattagacttacaccaaatctcaaccg 24624617  T

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Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 19186570 - 19186488
Alignment:
Q  16 tgtgatgtttaggaggagtagtataaaaggttgacattaaggattaatgcaatagattacaaccattaattattattaaaatcaaagg 103  Q
    ||||||||||||||| ||  |||||||||||| |     |||||||||||||||||| |||||| ||||||| |||||||||||||||    
T  19186570 tgtgatgtttaggagaaggcgtataaaaggttca-----aggattaatgcaatagatcacaacctttaattactattaaaatcaaagg 19186488  T

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Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 148
Target Start/End: Original strand, 42948196 - 42948230
Alignment:
Q  114 agacttactcttggagtcaatggatcccttctcat 148  Q
    |||||||||||||||||||||||||||||||||||    
T  42948196 agacttactcttggagtcaatggatcccttctcat 42948230  T

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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 8609229 - 8609193
Alignment:
Q  116 acttactcttggagtcaatggatcccttctcatatat 152  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  8609229 acttactcttggagtcaatggatccctcctcttatat 8609193  T

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Target: chr3 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 153
Target Start/End: Complemental strand, 15269735 - 15269696
Alignment:
Q  114 agacttactcttggagtcaatggatcccttctcatatata 153  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  15269735 agacttactcttggagtcaatggatcccttctcatatata 15269696  T

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Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 153
Target Start/End: Complemental strand, 40872953 - 40872914
Alignment:
Q  114 agacttactcttggagtcaatggatcccttctcatatata 153  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  40872953 agacttactcttggagtcaatggatcccttctcatatata 40872914  T

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Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 146
Target Start/End: Original strand, 15274071 - 15274103
Alignment:
Q  114 agacttactcttggagtcaatggatcccttctc 146  Q
    |||||||||||||||||||||||||||||||||    
T  15274071 agacttactcttggagtcaatggatcccttctc 15274103  T

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Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 145
Target Start/End: Original strand, 40877291 - 40877322
Alignment:
Q  114 agacttactcttggagtcaatggatcccttct 145  Q
    ||||||||||||||||||||||||||||||||    
T  40877291 agacttactcttggagtcaatggatcccttct 40877322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 31897997 - 31898034
Alignment:
Q  116 acttactcttggagtcaatggatcccttctcatatata 153  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  31897997 acttactcttagagtcaatggatccctcctcatatata 31898034  T

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Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 31913706 - 31913743
Alignment:
Q  116 acttactcttggagtcaatggatcccttctcatatata 153  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  31913706 acttactcttagagtcaatggatccctcctcatatata 31913743  T

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Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 31947354 - 31947391
Alignment:
Q  116 acttactcttggagtcaatggatcccttctcatatata 153  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  31947354 acttactcttagagtcaatggatccctcctcatatata 31947391  T

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Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 183
Target Start/End: Original strand, 7772015 - 7772051
Alignment:
Q  147 atatatagacaggatcagttgacatcaggtgtaagtc 183  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  7772015 atatatagacaggatccgttgacaccaggtgtaagtc 7772051  T

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Target: chr7 (Bit Score: 37; Significance: 0.00000000001; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 47171457 - 47171369
Alignment:
Q  156 caggatcagttgacatcaggtgtaagtcatttgacttatactaaatctcaaccgtttaatttagttgattgtgcggtttaaattatatc 244  Q
    ||||||| ||||||| |||||||||||||   |||||| || |||||| ||||||| |||||| ||||| ||  |||||||||||||||    
T  47171457 caggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatcttaaccgttaaatttaattgatcgtatggtttaaattatatc 47171369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 10233223 - 10233262
Alignment:
Q  230 ggtttaaattatatcaccacaataaataaaaagaacacat 269  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  10233223 ggtttaaattatatcaccaccataaataaaaagaacacat 10233262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 211
Target Start/End: Original strand, 9268888 - 9268952
Alignment:
Q  147 atatatagacaggatcagttgacatcaggtgtaagtcatttgacttatactaaatctcaaccgtt 211  Q
    |||||||  ||||||| ||||||| |||||||||||||| | ||||| || ||||||||||||||    
T  9268888 atatataagcaggatccgttgacaccaggtgtaagtcatataacttacaccaaatctcaaccgtt 9268952  T

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Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 146
Target Start/End: Original strand, 12263381 - 12263413
Alignment:
Q  114 agacttactcttggagtcaatggatcccttctc 146  Q
    |||||||||||||||||||||||||||||||||    
T  12263381 agacttactcttggagtcaatggatcccttctc 12263413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 153
Target Start/End: Complemental strand, 16664263 - 16664224
Alignment:
Q  114 agacttactcttggagtcaatggatcccttctcatatata 153  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  16664263 agacttactcttggagtcaatggatcttttctcatatata 16664224  T

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Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 153
Target Start/End: Complemental strand, 17638633 - 17638594
Alignment:
Q  114 agacttactcttggagtcaatggatcccttctcatatata 153  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  17638633 agacttactcttggagtcaatggatcttttctcatatata 17638594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 40461922 - 40461971
Alignment:
Q  159 gatcagttgacatcaggtgtaagtcatttgacttatactaaatctcaacc 208  Q
    |||| ||||||||||||||||| || ||||||||| || |||||||||||    
T  40461922 gatctgttgacatcaggtgtaactcttttgacttacaccaaatctcaacc 40461971  T

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Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 404
Target Start/End: Original strand, 10233346 - 10233394
Alignment:
Q  356 gagatgatcgacatcacaaatttcctaataatataaaacatcaataatc 404  Q
    |||| |||||||| || || |||||||||||||||||||| ||||||||    
T  10233346 gagaggatcgacaccataagtttcctaataatataaaacaccaataatc 10233394  T

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Target: chr2 (Bit Score: 34; Significance: 0.0000000007; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 528939 - 528902
Alignment:
Q  116 acttactcttggagtcaatggatcccttctcatatata 153  Q
    |||||||||||||||| |||||||||||||||||||||    
T  528939 acttactcttggagtccatggatcccttctcatatata 528902  T

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Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 244
Target Start/End: Original strand, 3666868 - 3666948
Alignment:
Q  164 gttgacatcaggtgtaagtcatttgacttatactaaatctcaaccgtttaatttagttgattgtgcggtttaaattatatc 244  Q
    ||||||| |||||||||||||   |||||| || |||||| ||||||| |||||| ||||| ||  |||||||||||||||    
T  3666868 gttgacaccaggtgtaagtcaaaagacttacaccaaatcttaaccgttaaatttaattgatcgtatggtttaaattatatc 3666948  T

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Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 146
Target Start/End: Original strand, 8194294 - 8194326
Alignment:
Q  114 agacttactcttggagtcaatggatcccttctc 146  Q
    |||||||||||||||||||||||||||||||||    
T  8194294 agacttactcttggagtcaatggatcccttctc 8194326  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 18883922 - 18883873
Alignment:
Q  159 gatcagttgacatcaggtgtaagtcatttgacttatactaaatctcaacc 208  Q
    |||| ||||||| |||||||||||||||||||||  || |||||||||||    
T  18883922 gatccgttgacaccaggtgtaagtcatttgacttgcaccaaatctcaacc 18883873  T

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Target: scaffold1862 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1862
Description:

Target: scaffold1862; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 100 - 31
Alignment:
Q  147 atatatagacaggatcagttgacatcaggtgtaagtcatttgacttatactaaatctcaaccgtttaatt 216  Q
    ||||| |||||||||| ||||||| ||||||||||||    |||||| || |||||||||||| ||||||    
T  100 atatagagacaggatccgttgacaccaggtgtaagtccaaagacttacaccaaatctcaaccgcttaatt 31  T

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