View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1751R-Insertion-10 (Length: 275)
Name: NF1751R-Insertion-10
Description: NF1751R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1751R-Insertion-10 |
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Alignment Details
Target: chr3 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 19 - 274
Target Start/End: Complemental strand, 49437586 - 49437332
Alignment:
| Q |
19 |
ataaacttgtttgttaccgaaattaagtctacaactttccannnnnnnggtttataaatttgttgaatccatttatcatacttcaattaaatttgttgac |
118 |
Q |
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| T |
49437586 |
ataaacttgtttgttaccgaaattaagtctacaactttccatttttt-ggtttataaatttgttgaatccatttatcatacttcaattaaatttgttgac |
49437488 |
T |
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| Q |
119 |
cttgtgtatgactttatccatttgttagaggtaaaacaaaggggatgatcatgtatagtcttaggatcatttataaactacacatatgcaactttgaatt |
218 |
Q |
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| T |
49437487 |
cttgtgtatgactttatccatttgttagaggtaaaacaaaggggatgatcatgtatagtcttaggatcatttataaactacacatatgcaactttgaatt |
49437388 |
T |
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| Q |
219 |
ctatctcaataagatcttccatttgaaagatccttatgttttaaaatagtttttta |
274 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
49437387 |
ctatctcaataagatcttccatttgaaagatctttatgttttaaaatagtttttta |
49437332 |
T |
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