View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1751R-Insertion-8 (Length: 315)
Name: NF1751R-Insertion-8
Description: NF1751R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1751R-Insertion-8 |
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Alignment Details
Target: chr1 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 8 - 312
Target Start/End: Original strand, 31141050 - 31141354
Alignment:
| Q |
8 |
agatacaagtgtcactgaccctacatcactctttcttcaaaatttctcatgttttcagcacatttaacctttaactatgagcttacctaatggttacaag |
107 |
Q |
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| T |
31141050 |
agatacaagtgtcactgaccctacatcactctttcttcaaaatttctcatgttttcagcacatttaacctttaactatgagcttacctaatggttacaag |
31141149 |
T |
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| Q |
108 |
acaaatgcagctatttcaggcagtatcaatcgtttctgttgtagcaaaaactcgccaattctttggattgttacattaacaactttccaaactaacaagg |
207 |
Q |
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| T |
31141150 |
actaatgcagctatttcaggcagtatcaatcgtttctgttgtagcaaaaactcgccaattctttggattgttacattaacaactttccaaactaacaagg |
31141249 |
T |
|
| Q |
208 |
agactaactttgcagagttccaacaagagacttattggtaaactttaagacatgaagatatgtaatgtatgtgttacgagttcatgcctcggtttcccta |
307 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31141250 |
agtctaactttgcagagttccaacaagagacttattggtaaactttaagacatgaagatatgtaatgtatgtgttacgagttcatgcctcggtttcccta |
31141349 |
T |
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| Q |
308 |
gctac |
312 |
Q |
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||||| |
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| T |
31141350 |
gctac |
31141354 |
T |
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