View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1751_high_4 (Length: 333)
Name: NF1751_high_4
Description: NF1751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1751_high_4 |
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Alignment Details
Target: chr3 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 49437280 - 49437586
Alignment:
| Q |
1 |
tatttacttgtactcaaaaaacagagctgtggaccgatgagctaaccaaggctaaaaaactattttaaaacataaggatctttcaaatggaagatcttat |
100 |
Q |
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| T |
49437280 |
tattttcttgaactcaaaaaacagagctgtggaccgatgagctaaccaagggtaaaaaactattttaaaacataaagatctttcaaatggaagatcttat |
49437379 |
T |
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| Q |
101 |
tgagatagaattcaaagttgcatatgtgtagtttataaatgatcctaagactatacatgatcatcccctttgttttacctctaacaaatggataaagtca |
200 |
Q |
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| T |
49437380 |
tgagatagaattcaaagttgcatatgtgtagtttataaatgatcctaagactatacatgatcatcccctttgttttacctctaacaaatggataaagtca |
49437479 |
T |
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| Q |
201 |
tacacaaggtcaacaaatttaattgaagtatgataaatggattcaacaaatttataaaccnnnnnnntggaaagttgtagacttaatttcggtaacaaac |
300 |
Q |
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| T |
49437480 |
tacacaaggtcaacaaatttaattgaagtatgataaatggattcaacaaatttataaacc-aaaaaatggaaagttgtagacttaatttcggtaacaaac |
49437578 |
T |
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| Q |
301 |
aagtttat |
308 |
Q |
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|||||||| |
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| T |
49437579 |
aagtttat |
49437586 |
T |
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