View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1751_high_9 (Length: 236)
Name: NF1751_high_9
Description: NF1751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1751_high_9 |
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Alignment Details
Target: chr5 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 8628696 - 8628565
Alignment:
| Q |
12 |
ataagggtgagttgaaaatatggtttgatgactatgtcgtgatatcattttcacgattatactactatggttaaccataaaatttcatacactatgtttt |
111 |
Q |
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| T |
8628696 |
ataagggtgagtcgaaaatatggtttgatgactatgtcgtgatatcatttttacaattatattattatggttaaccataaaatttcatacactacgttgt |
8628597 |
T |
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| Q |
112 |
atgttttgtgttgattcgattgtgtaaaagat |
143 |
Q |
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| T |
8628596 |
gtgttttatattgattcgattgtgtagaagat |
8628565 |
T |
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