View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17520_low_8 (Length: 416)

Name: NF17520_low_8
Description: NF17520
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17520_low_8
NF17520_low_8
[»] chr1 (22 HSPs)
chr1 (1-400)||(31015074-31015467)
chr1 (269-400)||(31193496-31193621)
chr1 (111-226)||(31193381-31193496)
chr1 (18-83)||(32461393-32461458)
chr1 (18-84)||(37598885-37598951)
chr1 (18-83)||(47989562-47989627)
chr1 (18-84)||(25934681-25934747)
chr1 (18-84)||(51410079-51410145)
chr1 (22-82)||(10577676-10577736)
chr1 (18-81)||(1486646-1486709)
chr1 (18-84)||(9828109-9828175)
chr1 (18-84)||(40917814-40917880)
chr1 (18-83)||(18337383-18337448)
chr1 (18-83)||(41597410-41597475)
chr1 (20-84)||(6427531-6427595)
chr1 (18-82)||(21032271-21032335)
chr1 (34-84)||(15765828-15765878)
chr1 (17-83)||(36906061-36906126)
chr1 (18-83)||(18556385-18556450)
chr1 (18-83)||(22515827-22515892)
chr1 (18-83)||(46348323-46348388)
chr1 (1-84)||(18471331-18471415)
[»] chr5 (21 HSPs)
chr5 (1-83)||(21576685-21576773)
chr5 (17-82)||(6401562-6401627)
chr5 (18-83)||(31084382-31084447)
chr5 (21-81)||(23015926-23015986)
chr5 (18-80)||(39268541-39268603)
chr5 (18-83)||(21522815-21522880)
chr5 (18-83)||(21533381-21533446)
chr5 (18-83)||(21814326-21814391)
chr5 (18-67)||(30098994-30099043)
chr5 (19-84)||(40131687-40131752)
chr5 (18-66)||(21542095-21542143)
chr5 (18-66)||(30502345-30502393)
chr5 (18-66)||(30542688-30542736)
chr5 (18-81)||(21190998-21191061)
chr5 (18-81)||(43001859-43001922)
chr5 (18-80)||(18592138-18592200)
chr5 (17-83)||(30098390-30098456)
chr5 (18-84)||(43564935-43565001)
chr5 (19-84)||(14873577-14873642)
chr5 (18-83)||(39698606-39698671)
chr5 (31-83)||(35017110-35017162)
[»] chr6 (22 HSPs)
chr6 (18-84)||(17327589-17327655)
chr6 (21-84)||(8365447-8365510)
chr6 (18-83)||(34595188-34595253)
chr6 (18-84)||(10339053-10339119)
chr6 (18-84)||(18367901-18367967)
chr6 (17-82)||(31384983-31385048)
chr6 (18-82)||(17841530-17841594)
chr6 (18-81)||(12696383-12696446)
chr6 (18-80)||(32978842-32978904)
chr6 (18-83)||(16488519-16488584)
chr6 (18-83)||(28152152-28152217)
chr6 (28-80)||(7996325-7996377)
chr6 (28-80)||(8022424-8022476)
chr6 (19-83)||(13789209-13789273)
chr6 (19-83)||(13797828-13797892)
chr6 (4-82)||(31959193-31959268)
chr6 (24-82)||(9658939-9658998)
chr6 (28-83)||(34446635-34446690)
chr6 (18-84)||(4877997-4878062)
chr6 (47-84)||(10649371-10649408)
chr6 (18-83)||(16766762-16766827)
chr6 (24-84)||(8776907-8776967)
[»] chr8 (18 HSPs)
chr8 (18-83)||(34450961-34451026)
chr8 (18-83)||(3951476-3951541)
chr8 (17-81)||(3025604-3025668)
chr8 (18-82)||(29447040-29447104)
chr8 (18-82)||(43737752-43737816)
chr8 (17-83)||(26902104-26902170)
chr8 (18-84)||(29510232-29510298)
chr8 (18-83)||(22652041-22652106)
chr8 (13-84)||(8343376-8343447)
chr8 (18-84)||(5813646-5813712)
chr8 (18-56)||(26915202-26915240)
chr8 (18-83)||(15816058-15816123)
chr8 (18-83)||(16641909-16641974)
chr8 (18-83)||(33405324-33405389)
chr8 (18-83)||(36450694-36450759)
chr8 (19-83)||(6065586-6065650)
chr8 (46-82)||(13009423-13009459)
chr8 (23-67)||(22943305-22943349)
[»] chr2 (20 HSPs)
chr2 (18-83)||(24009349-24009414)
chr2 (21-83)||(26769579-26769641)
chr2 (19-83)||(30717459-30717523)
chr2 (18-67)||(12224277-12224326)
chr2 (27-83)||(12668352-12668408)
chr2 (18-82)||(28596523-28596587)
chr2 (19-83)||(36096304-36096368)
chr2 (18-81)||(2438661-2438724)
chr2 (17-84)||(34993921-34993988)
chr2 (167-248)||(22126962-22127044)
chr2 (18-84)||(37419808-37419874)
chr2 (17-83)||(42511322-42511388)
chr2 (18-83)||(11223793-11223857)
chr2 (18-83)||(38117099-38117164)
chr2 (1-76)||(21624298-21624374)
chr2 (18-81)||(19942319-19942382)
chr2 (18-83)||(18840953-18841018)
chr2 (18-83)||(35056933-35056998)
chr2 (178-226)||(37812300-37812348)
chr2 (18-82)||(44860385-44860449)
[»] chr7 (14 HSPs)
chr7 (18-84)||(5409770-5409836)
chr7 (18-84)||(9778559-9778625)
chr7 (21-83)||(25822723-25822785)
chr7 (25-83)||(29763129-29763187)
chr7 (18-83)||(598262-598327)
chr7 (18-83)||(24339707-24339772)
chr7 (18-83)||(43027404-43027469)
chr7 (18-84)||(15680863-15680929)
chr7 (18-83)||(32093954-32094020)
chr7 (18-83)||(21880206-21880271)
chr7 (18-83)||(25481956-25482021)
chr7 (18-82)||(20549845-20549909)
chr7 (19-83)||(21864863-21864927)
chr7 (18-82)||(32287404-32287468)
[»] chr4 (22 HSPs)
chr4 (17-83)||(5414101-5414167)
chr4 (18-83)||(23292926-23292991)
chr4 (18-82)||(30982808-30982872)
chr4 (18-84)||(19500786-19500852)
chr4 (18-84)||(24613629-24613695)
chr4 (111-173)||(49190144-49190206)
chr4 (18-83)||(12895214-12895279)
chr4 (23-84)||(19482738-19482799)
chr4 (18-83)||(28964188-28964253)
chr4 (18-82)||(3947702-3947766)
chr4 (23-83)||(29205527-29205587)
chr4 (33-84)||(2625958-2626009)
chr4 (29-80)||(28084589-28084640)
chr4 (25-83)||(715545-715603)
chr4 (25-83)||(752871-752929)
chr4 (147-221)||(10364684-10364758)
chr4 (17-83)||(36635383-36635449)
chr4 (22-83)||(18966567-18966628)
chr4 (117-206)||(24232028-24232117)
chr4 (18-82)||(848016-848080)
chr4 (18-82)||(14465006-14465070)
chr4 (178-222)||(55253325-55253369)
[»] chr3 (21 HSPs)
chr3 (1-83)||(20503496-20503584)
chr3 (1-81)||(28918032-28918120)
chr3 (21-84)||(41961578-41961641)
chr3 (18-83)||(10955006-10955074)
chr3 (18-83)||(13845465-13845530)
chr3 (18-83)||(55401129-55401194)
chr3 (18-84)||(14209178-14209244)
chr3 (18-84)||(40993274-40993340)
chr3 (18-67)||(7171555-7171604)
chr3 (17-82)||(14216956-14217021)
chr3 (17-82)||(14223085-14223150)
chr3 (18-82)||(15864886-15864950)
chr3 (25-82)||(15999951-16000008)
chr3 (18-83)||(27505305-27505370)
chr3 (18-83)||(35222992-35223057)
chr3 (19-83)||(34185052-34185116)
chr3 (18-81)||(4987222-4987285)
chr3 (24-79)||(11666015-11666070)
chr3 (1-60)||(35312085-35312144)
chr3 (18-64)||(2941612-2941658)
chr3 (18-83)||(8842383-8842448)
[»] scaffold0380 (1 HSPs)
scaffold0380 (25-84)||(8662-8721)
[»] scaffold0361 (1 HSPs)
scaffold0361 (1-83)||(14561-14646)
[»] scaffold0306 (1 HSPs)
scaffold0306 (18-81)||(13460-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (18-81)||(21804-21867)
[»] scaffold0512 (1 HSPs)
scaffold0512 (18-83)||(4976-5041)
[»] scaffold0003 (1 HSPs)
scaffold0003 (18-83)||(241659-241724)
[»] scaffold0475 (1 HSPs)
scaffold0475 (17-84)||(3361-3428)
[»] scaffold0136 (1 HSPs)
scaffold0136 (18-84)||(3777-3843)
[»] scaffold0053 (1 HSPs)
scaffold0053 (18-83)||(8852-8917)
[»] scaffold0652 (1 HSPs)
scaffold0652 (18-82)||(403-467)
[»] scaffold0623 (1 HSPs)
scaffold0623 (18-82)||(5926-5990)
[»] scaffold0004 (1 HSPs)
scaffold0004 (18-82)||(92876-92940)
[»] scaffold0036 (1 HSPs)
scaffold0036 (18-81)||(9678-9741)
[»] scaffold0793 (1 HSPs)
scaffold0793 (25-83)||(4821-4879)
[»] scaffold0450 (1 HSPs)
scaffold0450 (21-83)||(8564-8626)
[»] scaffold0019 (1 HSPs)
scaffold0019 (18-84)||(71790-71856)
[»] scaffold0083 (1 HSPs)
scaffold0083 (18-63)||(45490-45535)
[»] scaffold0168 (1 HSPs)
scaffold0168 (48-84)||(21243-21279)


Alignment Details
Target: chr1 (Bit Score: 341; Significance: 0; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 1 - 400
Target Start/End: Original strand, 31015074 - 31015467
Alignment:
Q  1 attcagtgtaattacaagtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcataggcccccacctataaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  31015074 attcagtgtaattacaagtgtcggacacgacacgtgtctgacatcgggacacgcctaatccaaggaggatcagtgcttcataggcccccacctataaaca 31015173  T
Q  101 tattttcagttggtccaatggatattggataggctctgctaccacattagaatttgagttcagccaaactcaacccatacaaaatcgacttgtatggtga 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31015174 tattttcagttggtccaatggatattggataggctctgctaccacattagaatttgagttcagccaaaatcaacccatacaaaatcgacttgtatggtga 31015273  T
Q  201 gtactgtctccacttataaacacattttccggcctgatctcattcaattcaaagtaagacacttaacatacagtcaagttgagagaagcgagaatcatat 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||         
T  31015274 gtactgtctccacttataaacacattttccggcctgatctcattcaattcaaagtaagaaaattaacatacagtcaagtcgagagaagcgagaat----- 31015368  T
Q  301 acatatacttattcaatatcataacattaacataatagcatacatttttgctccaaattaaatccactaggctgcatactgaaactattatagaataatt 400  Q
     ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31015369 -catctacttattcaatatcataacattaacataatagcacacatttttgctccaaattaaatccactaggctgcatactgaaactattatagaacaatt 31015467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 269 - 400
Target Start/End: Original strand, 31193496 - 31193621
Alignment:
Q  269 tacagtcaagttgagagaagcgagaatcatatacatatacttattcaatatcataacattaacataatagcatacatttttgctccaaattaaatccact 368  Q
    |||| ||||||||| ||||||||||||||| |||      |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  31193496 tacaatcaagttgaaagaagcgagaatcatctac------ttattcaatatcataacattaagataatagcatacatttttgctccaaattaaatccact 31193589  T
Q  369 aggctgcatactgaaactattatagaataatt 400  Q
    ||||||||||| ||||||||||||||| ||||    
T  31193590 aggctgcatacggaaactattatagaacaatt 31193621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 111 - 226
Target Start/End: Original strand, 31193381 - 31193496
Alignment:
Q  111 tggtccaatggatattggataggctctgctaccacattagaatttgagttcagccaaactcaacccatacaaaatcgacttgtatggtgagtactgtctc 210  Q
    ||||||||| ||| || |||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |  |||||    
T  31193381 tggtccaattgatcttagataagctctgctaccatattagaatttgagttcggccaaactcaacccatacaaaattgacttgtatggtgagaatcgtctc 31193480  T
Q  211 cacttataaacacatt 226  Q
    ||||||||||||||||    
T  31193481 cacttataaacacatt 31193496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 32461458 - 32461393
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||  ||||||||||||||    
T  32461458 gtgtcggacacgacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgcttcatag 32461393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 37598885 - 37598951
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    ||||||||||||||||||||| |||| ||||||||||||||||| |||||  |||||||||||||||    
T  37598885 gtgtcggacacgacacgtgtccgacaatgggacacgcctaatccgaggagtgtccgtgcttcatagg 37598951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 47989562 - 47989627
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    |||||||||||||||| |||||||||| |||||||||||||||| |||||  ||||||||||||||    
T  47989562 gtgtcggacacgacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgcttcatag 47989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 25934681 - 25934747
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    ||||||||||||||||||||||||||  |||| |||||| ||||||||||  |||||||||||||||    
T  25934681 gtgtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcatagg 25934747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 51410079 - 51410145
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    |||||||||||||||||| || ||||  | |||||||||||||||||||| || |||||||||||||    
T  51410079 gtgtcggacacgacacgtatccgacaccgagacacgcctaatccaaggagtattcgtgcttcatagg 51410145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 10577736 - 10577676
Alignment:
Q  22 cggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcata 82  Q
    |||||||||| |||||||||||  ||||||||||| ||||||||||  |||||||||||||    
T  10577736 cggacacgacgcgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 10577676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 1486709 - 1486646
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcat 81  Q
    ||||||||||||||||||||| ||||  |||||||||||||||| |||||  || |||||||||    
T  1486709 gtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 9828109 - 9828175
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    ||||| ||||||||||||||| ||||  |||||||| ||||||| |||||  |||||||||||||||    
T  9828109 gtgtcagacacgacacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatagg 9828175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 40917814 - 40917880
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    |||| |||||||||||||||| ||||  |||||||||||||||| ||||   |||||||||||||||    
T  40917814 gtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcatagg 40917880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 18337383 - 18337448
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||| ||||||||| |||| ||||||| |||| |||| |||||  ||||||||||||||    
T  18337383 gtgtcggacacaacacgtgtccgacactgggacatgcctgatccgaggagtgtccgtgcttcatag 18337448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 41597475 - 41597410
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||||||||||||||||||  |||| |||| | ||||||||||  || |||||||||||    
T  41597475 gtgtcggacacgacacgtgtctgacacggggatacgctttatccaaggagtgtctgtgcttcatag 41597410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 6427531 - 6427595
Alignment:
Q  20 gtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    ||||||||||||||||||| ||||  |||||||||||||||  | |||  |||||||||||||||    
T  6427531 gtcggacacgacacgtgtccgacaccgggacacgcctaatctgatgagtgtccgtgcttcatagg 6427595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 21032271 - 21032335
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcata 82  Q
    ||||||||||||||| ||||| ||||| | || |||||||||||||||||  || ||||||||||    
T  21032271 gtgtcggacacgacatgtgtccgacatcgagagacgcctaatccaaggagtgtctgtgcttcata 21032335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 15765828 - 15765878
Alignment:
Q  34 gtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    |||||||||| ||||||||||||||||| | |||  |||||||||||||||    
T  15765828 gtgtctgacactgggacacgcctaatccgaagagtgtccgtgcttcatagg 15765878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 36906061 - 36906126
Alignment:
Q  17 agtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||||||| || |||||||| |||||||| |||||| ||| |||  ||||||||||||||    
T  36906061 agtgtcggacacgacccgcgtctgacactgggacacacctaatgcaa-gagtgtccgtgcttcatag 36906126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 18556450 - 18556385
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||| ||| |||||||| || |||| ||||||||||||||||| || ||  ||||||||||||||    
T  18556450 gtgtcagacccgacacgtatccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 18556385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 22515892 - 22515827
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    |||||||||||||||| | || ||||  | |||||||||||||| |||||  ||||||||||||||    
T  22515892 gtgtcggacacgacacatatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 22515827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 46348388 - 46348323
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||||||||||||| ||||  | ||||||||| |||| ||| |  ||||||||||||||    
T  46348388 gtgtcggacacgacacgtgtccgacaccgagacacgcctgatccgaggtgtgtccgtgcttcatag 46348323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 18471331 - 18471415
Alignment:
Q  1 attcagtgtaattacaagtgtcgg-acacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    ||||||| |||||||||||||||| |||||||||||||| ||||  |  |||| |||||| | |||||  ||||| |||||||||    
T  18471331 attcagtataattacaagtgtcggtacacgacacgtgtccgacaccgaaacacacctaattcgaggagtgtccgtacttcatagg 18471415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 21576773 - 21576685
Alignment:
Q  1 attcagtgtaattacaagtgtcg------gacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    |||||||||||||||||||||||      |||||||||||||||||||| ||||||||||||||||| |||||  ||||||||||||||    
T  21576773 attcagtgtaattacaagtgtcgatgtcggacacgacacgtgtctgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 21576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 6401562 - 6401627
Alignment:
Q  17 agtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcata 82  Q
    |||||||||||||||||||||||||||  |||| |||||| ||||||||||  |||||||||||||    
T  6401562 agtgtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcata 6401627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 31084382 - 31084447
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||| |||||  |||||| |||||||    
T  31084382 gtgtcggacacgacacgtgtccgacactgggacatgcctaatccgaggagtgtccgtggttcatag 31084447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 23015986 - 23015926
Alignment:
Q  21 tcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcat 81  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||||  |||| |||||||    
T  23015986 tcggacacgacatgtgtccgacattgggacacgcctaatccgaggagtgtccgagcttcat 23015926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 39268603 - 39268541
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttca 80  Q
    |||| |||||||||| ||||| |||| ||||||||||||||||| |||||  |||||||||||    
T  39268603 gtgttggacacgacatgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 21522815 - 21522880
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||||||||||||| | ||  |||||||||||||||||| |||  ||||||| ||||||    
T  21522815 gtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcatag 21522880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 21533381 - 21533446
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||||||||||||| | ||  |||||||||||||||||| |||  ||||||| ||||||    
T  21533381 gtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcatag 21533446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 21814326 - 21814391
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||||||||||||||| ||  ||||||||||| |||||||||   | ||||||||||||    
T  21814326 gtgtcggacacgacacgtgtctggcacggggacacgccttatccaaggaatgttcgtgcttcatag 21814391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 30099043 - 30098994
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggag 67  Q
    |||||||| |||||||||||||||||  ||||||||||| ||||||||||    
T  30099043 gtgtcggatacgacacgtgtctgacacggggacacgccttatccaaggag 30098994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 40131687 - 40131752
Alignment:
Q  19 tgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    |||| ||||||||  |||||||||||||||||||| ||| |||||||||  |||||| ||||||||    
T  40131687 tgtcagacacgacttgtgtctgacattgggacacgtctactccaaggagtgtccgtgtttcatagg 40131752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 21542095 - 21542143
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaagga 66  Q
    ||||||||||||||||||||| ||||  |||||||||| ||||||||||    
T  21542095 gtgtcggacacgacacgtgtccgacaccgggacacgccgaatccaagga 21542143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 30502393 - 30502345
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaagga 66  Q
    |||||||||||||||| |||| |||| ||||||| ||||||||||||||    
T  30502393 gtgtcggacacgacacatgtccgacactgggacatgcctaatccaagga 30502345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 30542736 - 30542688
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaagga 66  Q
    |||||||||||||||| |||| |||| ||||||| ||||||||||||||    
T  30542736 gtgtcggacacgacacatgtccgacactgggacatgcctaatccaagga 30542688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 21191061 - 21190998
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcat 81  Q
    ||||||||||| ||||||||| |||   |||||||||||||||| |||||  ||||||||||||    
T  21191061 gtgtcggacacaacacgtgtccgactccgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 43001859 - 43001922
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcat 81  Q
    |||||||||||||||||||||  |||   ||||||||||||||| |||||  ||||||||||||    
T  43001859 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 43001922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 18592138 - 18592200
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttca 80  Q
    ||||||||||| ||||||||||||||| |||||||| ||||| | | |||  |||||||||||    
T  18592138 gtgtcggacacaacacgtgtctgacatcgggacacggctaattcgatgagtgtccgtgcttca 18592200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 30098390 - 30098456
Alignment:
Q  17 agtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    |||||||||||||||||||||| ||||   |||||| |||||||| ||||   ||||||||||||||    
T  30098390 agtgtcggacacgacacgtgtcagacaccaggacacacctaatccgaggaatgtccgtgcttcatag 30098456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 43564935 - 43565001
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    ||||||||||||||| ||||| |||   |||||||||||||||| || ||  |||||||||||||||    
T  43564935 gtgtcggacacgacatgtgtccgacgccgggacacgcctaatccgagaagtgtccgtgcttcatagg 43565001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 14873577 - 14873642
Alignment:
Q  19 tgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    |||||||| | |||||||||  |||  |||||||||||||||| |||||  |||||||||||||||    
T  14873577 tgtcggacgcaacacgtgtccaacaccgggacacgcctaatccgaggagtgtccgtgcttcatagg 14873642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 39698606 - 39698671
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||||||| || || ||||  | |||||||||||||| |||||  ||||||||||||||    
T  39698606 gtgtcggacacgacatgtatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 39698671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 35017110 - 35017162
Alignment:
Q  31 cacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||  |||| |||||||||||||||| |||||  ||||||||||||||    
T  35017110 cacgtgtccaacatcgggacacgcctaatccgaggagtgtccgtgcttcatag 35017162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 17327655 - 17327589
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    ||||||||||||||||||||||||||  |||||||||||||||| |||||  |||||||||||||||    
T  17327655 gtgtcggacacgacacgtgtctgacacagggacacgcctaatccgaggagtgtccgtgcttcatagg 17327589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 8365510 - 8365447
Alignment:
Q  21 tcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    |||||||||||||||||| |||| ||||||||||||||||| |||||  |||||||||||||||    
T  8365510 tcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtctccgtgcttcatagg 8365447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 34595188 - 34595253
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||||||||||||||||||  ||||||| |||||||| |||||  ||||||||||||||    
T  34595188 gtgtcggacacgacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 34595253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 10339119 - 10339053
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    |||||||||||||||| |||| |||| ||||||||||||||||  |||||  |||||||||||||||    
T  10339119 gtgtcggacacgacacatgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatagg 10339053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 18367901 - 18367967
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    ||||| |||||||||| |||||||||  ||||||||||| ||||||||||  |||||||||||||||    
T  18367901 gtgtcagacacgacacatgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagg 18367967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 31384983 - 31385048
Alignment:
Q  17 agtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcata 82  Q
    ||||| ||||||||||||||||  |||  ||||||||||||||||||||||  |||||||||||||    
T  31384983 agtgttggacacgacacgtgtcctacaccgggacacgcctaatccaaggagtgtccgtgcttcata 31385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 17841594 - 17841530
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcata 82  Q
    ||||||||||||||| ||||| |||| || |||||||||||||| |||||  |||||||||||||    
T  17841594 gtgtcggacacgacatgtgtccgacactgagacacgcctaatccgaggagtgtccgtgcttcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 12696383 - 12696446
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcat 81  Q
    ||||||||||||||||||||||||||  ||||||| ||| ||||||||||  || |||||||||    
T  12696383 gtgtcggacacgacacgtgtctgacaccgggacacaccttatccaaggagtgtctgtgcttcat 12696446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 32978904 - 32978842
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttca 80  Q
    |||||||||||||||| |||| ||||  |||||||| |||||||||||||  |||||||||||    
T  32978904 gtgtcggacacgacacatgtccgacaccgggacacgtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 16488584 - 16488519
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||||||||||||||| ||  ||||||||||| |||||||||   | ||||||||||||    
T  16488584 gtgtcggacacgacacgtgtctggcacggggacacgccttatccaaggaatgttcgtgcttcatag 16488519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 28152152 - 28152217
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||||||||||||| ||||  |||||| ||||||||| |||||  | ||||||||||||    
T  28152152 gtgtcggacacgacacgtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcatag 28152217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 7996377 - 7996325
Alignment:
Q  28 cgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttca 80  Q
    |||||||||||| |||  ||||||||||||||||||||||  |||||||||||    
T  7996377 cgacacgtgtctaacacggggacacgcctaatccaaggagtctccgtgcttca 7996325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 8022424 - 8022476
Alignment:
Q  28 cgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttca 80  Q
    |||||||||||| |||  ||||||||||||||||||||||  |||||||||||    
T  8022424 cgacacgtgtctaacacggggacacgcctaatccaaggagtctccgtgcttca 8022476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 13789209 - 13789273
Alignment:
Q  19 tgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||| |||||||||||||||| |||| |||||| || |||||||  | ||||||||||||    
T  13789209 tgtcggacatgacacgtgtctgacatggggatacgccttattcaaggagtgttcgtgcttcatag 13789273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 13797828 - 13797892
Alignment:
Q  19 tgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||| |||||||||||||||| |||| |||||| || |||||||  | ||||||||||||    
T  13797828 tgtcggacatgacacgtgtctgacatggggatacgccttattcaaggagtgttcgtgcttcatag 13797892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 31959193 - 31959268
Alignment:
Q  4 cagtgtaattacaagtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcata 82  Q
    |||||||||||||||||||||   ||||| ||||| ||||  ||||||| |||||||| |||||  |||||||||||||    
T  31959193 cagtgtaattacaagtgtcgg---cgacatgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 31959268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 9658939 - 9658998
Alignment:
Q  24 gacacgacacgtgtctgacattgggacacgcctaa-tccaaggaggatccgtgcttcata 82  Q
    ||||||||||||||||||||  || |||||||||| |||||||||  |||||||||||||    
T  9658939 gacacgacacgtgtctgacaccggaacacgcctaattccaaggagtgtccgtgcttcata 9658998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 34446635 - 34446690
Alignment:
Q  28 cgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    |||| ||| ||||||| |||||||| ||||||||||||||  ||||||||||||||    
T  34446635 cgacgcgtatctgacactgggacacacctaatccaaggagtgtccgtgcttcatag 34446690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 4877997 - 4878062
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    |||||||||||||||| |||| ||||  || ||||||||||||| |||||  |||||||||||||||    
T  4877997 gtgtcggacacgacacatgtccgacacagg-acacgcctaatccgaggagtgtccgtgcttcatagg 4878062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 84
Target Start/End: Original strand, 10649371 - 10649408
Alignment:
Q  47 ggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    |||||||||||||||||||||  |||||||||||||||    
T  10649371 ggacacgcctaatccaaggagtgtccgtgcttcatagg 10649408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 16766762 - 16766827
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||| ||||||||| ||||  |||||||||||||||| | ||   ||||||||||||||    
T  16766762 gtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgcttcatag 16766827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 8776967 - 8776907
Alignment:
Q  24 gacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    ||||||||||||||| ||||  | ||||| |||||||| |||||  |||||||||||||||    
T  8776967 gacacgacacgtgtccgacaccgagacacacctaatccgaggagtgtccgtgcttcatagg 8776907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 4e-17; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 34451026 - 34450961
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||||||||  ||||||||||||||    
T  34451026 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 34450961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 3951541 - 3951476
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||| ||||||||||||||||||||  || |||||||||||||||||||  ||||||||||||||    
T  3951541 gtgtcagacacgacacgtgtctgacacgggaacacgcctaatccaaggagtttccgtgcttcatag 3951476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 3025604 - 3025668
Alignment:
Q  17 agtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcat 81  Q
    ||||||||||||||||||||||||||| || |||||| ||||||| |||||  ||||||||||||    
T  3025604 agtgtcggacacgacacgtgtctgacactgtgacacggctaatccgaggagtgtccgtgcttcat 3025668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 29447104 - 29447040
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcata 82  Q
    ||||||||||||||| ||||||||||   ||||||||||||||| |||||  |||||||||||||    
T  29447104 gtgtcggacacgacatgtgtctgacaccaggacacgcctaatcctaggagtgtccgtgcttcata 29447040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 43737816 - 43737752
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcata 82  Q
    ||||||||||||||| ||||||||||  |||| |||||| ||||||||||  |||||||||||||    
T  43737816 gtgtcggacacgacaggtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcata 43737752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 26902170 - 26902104
Alignment:
Q  17 agtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    |||||||||||||||||||||||| ||  ||||||||||| |||  |||||  ||||||||||||||    
T  26902170 agtgtcggacacgacacgtgtctggcacggggacacgccttatctgaggagtgtccgtgcttcatag 26902104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 29510298 - 29510232
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    |||||||||||||| |||||| ||||  ||||||| |||||||| |||||  |||||||||||||||    
T  29510298 gtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatagg 29510232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 22652041 - 22652106
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||||||| ||||| ||||  |||||||| ||||||| |||||  ||||||||||||||    
T  22652041 gtgtcggacacgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22652106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 8343376 - 8343447
Alignment:
Q  13 tacaagtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    |||| ||||| ||||||||||||||| ||||  |||||||||||||||| | |||  || ||||||||||||    
T  8343376 tacacgtgtccgacacgacacgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatagg 8343447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 5813646 - 5813712
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    ||||||||||||||||||||| ||||  ||||||||||||||   |||||  |||||||||| ||||    
T  5813646 gtgtcggacacgacacgtgtccgacaccgggacacgcctaattggaggagtgtccgtgcttcgtagg 5813712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 26915240 - 26915202
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcct 56  Q
    ||||||||||||| ||||||| |||||||||||||||||    
T  26915240 gtgtcggacacgatacgtgtcagacattgggacacgcct 26915202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 15816123 - 15816058
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    |||||||||||||||||  || ||||  |||||||||||||||| || ||  ||||||||||||||    
T  15816123 gtgtcggacacgacacgaatccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 15816058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 16641974 - 16641909
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||||||| |||||| |||  ||||||| |||||||| |||||  || |||||||||||    
T  16641974 gtgtcggacacgacatgtgtctaacaccgggacacacctaatccgaggagtgtctgtgcttcatag 16641909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 33405389 - 33405324
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    |||||||||||||||| |||||||||   ||||||| ||||||||| |||  |||||||| |||||    
T  33405389 gtgtcggacacgacacatgtctgacacctggacacggctaatccaatgagtgtccgtgctccatag 33405324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 36450759 - 36450694
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    |||||||||||||| |||||| ||||   ||||||||||||||| |||||  || |||||||||||    
T  36450759 gtgtcggacacgacgcgtgtccgacaccaggacacgcctaatccgaggagtgtctgtgcttcatag 36450694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 6065650 - 6065586
Alignment:
Q  19 tgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||||||| |||| ||||  || |||||| |||| |||||||  ||||||||||||||    
T  6065650 tgtcggacacgacacatgtccgacaccggaacacgcataattcaaggagtgtccgtgcttcatag 6065586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 82
Target Start/End: Complemental strand, 13009459 - 13009423
Alignment:
Q  46 gggacacgcctaatccaaggaggatccgtgcttcata 82  Q
    ||||||||||||||||||||||  |||||||||||||    
T  13009459 gggacacgcctaatccaaggagcgtccgtgcttcata 13009423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 22943349 - 22943305
Alignment:
Q  23 ggacacgacacgtgtctgacattgggacacgcctaatccaaggag 67  Q
    |||||||||||||||| ||||  |||||||||||||||| |||||    
T  22943349 ggacacgacacgtgtccgacaccgggacacgcctaatccgaggag 22943305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 24009349 - 24009414
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||||||||  ||||||||||||||    
T  24009349 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 24009414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 26769579 - 26769641
Alignment:
Q  21 tcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    |||||||||||||||||| |||| ||||||||||||||||| |||||  ||||||||||||||    
T  26769579 tcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 26769641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 30717523 - 30717459
Alignment:
Q  19 tgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    |||||||||||||||||||  |||| ||||| |||||||||||||||||  ||||||||||||||    
T  30717523 tgtcggacacgacacgtgttcgacactgggatacgcctaatccaaggagtgtccgtgcttcatag 30717459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 12224277 - 12224326
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggag 67  Q
    ||||||||||||| ||||||| |||| |||||||||||||||||||||||    
T  12224277 gtgtcggacacgatacgtgtccgacactgggacacgcctaatccaaggag 12224326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 12668408 - 12668352
Alignment:
Q  27 acgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||| |||||||||||||||| |||||| | ||||| |||||||||||||||    
T  12668408 acgacacgtatctgacattgggacacacctaattcgaggagtatccgtgcttcatag 12668352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 28596523 - 28596587
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcata 82  Q
    ||||||||||||||||||||| |||| | |||||| |||||||| |||||  |||||||||||||    
T  28596523 gtgtcggacacgacacgtgtccgacactcggacactcctaatccgaggagtgtccgtgcttcata 28596587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 36096368 - 36096304
Alignment:
Q  19 tgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    |||||||||||||||||||||||||  ||||||||||| | |||| |||  ||||||||||||||    
T  36096368 tgtcggacacgacacgtgtctgacacggggacacgccttaaccaaagagtgtccgtgcttcatag 36096304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 2438724 - 2438661
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcat 81  Q
    |||||||||||||||| |||| ||||  |||||||||||||||| |||||  ||||||||||||    
T  2438724 gtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 34993988 - 34993921
Alignment:
Q  17 agtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    ||||||| |||||||| ||||| |||| ||||||||||||||| |||||||  | |||||||||||||    
T  34993988 agtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgcttcatagg 34993921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 248
Target Start/End: Complemental strand, 22127044 - 22126962
Alignment:
Q  167 aactcaacccatacaaaatcgacttgtatggtgagtactgtct-ccacttataaacacattttccggcctgatctcattcaat 248  Q
    |||||||||| ||||||||||  ||||| |||||| |||| |  |||||||||||||||||||| ||||| ||||||| ||||    
T  22127044 aactcaacccttacaaaatcggtttgtaaggtgaggactgcccaccacttataaacacattttcaggcctcatctcatccaat 22126962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 37419808 - 37419874
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    |||||||||||||  |||||| ||||  |||||||||||||||| |||||  |||||||||||||||    
T  37419808 gtgtcggacacgatgcgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatagg 37419874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 42511388 - 42511322
Alignment:
Q  17 agtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    |||||||||||| ||||||||| ||||  |||||||| ||||||| |||||  ||||||||||||||    
T  42511388 agtgtcggacacaacacgtgtccgacacagggacacggctaatccgaggagtgtccgtgcttcatag 42511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 11223857 - 11223793
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    |||||||||||||||| |||||||||  |||||||||||||||  |||||  ||||||||||||||    
T  11223857 gtgtcggacacgacac-tgtctgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 11223793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 38117164 - 38117099
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||| ||||||||| ||||  |||||||||||||||| ||| |  ||||||||||||||    
T  38117164 gtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcatag 38117099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 21624298 - 21624374
Alignment:
Q  1 attcagtgtaattacaagtgtcggacac-gacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgc 76  Q
    ||||||||||||||||||||||||   | |||||||||| ||||  ||||||| ||||||||||||||  |||||||    
T  21624298 attcagtgtaattacaagtgtcggtgtcggacacgtgtccgacagcgggacacacctaatccaaggagtgtccgtgc 21624374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 19942319 - 19942382
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcat 81  Q
    |||||||||||| || ||||||||||  |||||||||||||||| |||||  ||| ||||||||    
T  19942319 gtgtcggacacggcatgtgtctgacaccgggacacgcctaatccgaggagtgtccatgcttcat 19942382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 18841018 - 18840953
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||| |||||||||| |||| ||||  ||||||| |||||||| |||||  ||||||||||||||    
T  18841018 gtgtcagacacgacacatgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 18840953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 35056933 - 35056998
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||||||||||||| ||||  |  ||||||||||||  |||||  ||||||||||||||    
T  35056933 gtgtcggacacgacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgcttcatag 35056998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 37812300 - 37812348
Alignment:
Q  178 tacaaaatcgacttgtatggtgagtactgtctccacttataaacacatt 226  Q
    ||||||||||||||||  |||||| | |||| |||||||||||||||||    
T  37812300 tacaaaatcgacttgtgaggtgaggattgtccccacttataaacacatt 37812348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 44860385 - 44860449
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcata 82  Q
    |||| |||||||||| ||||| ||||| ||||||| |||||| | |||||  |||||||||||||    
T  44860385 gtgttggacacgacatgtgtccgacatcgggacacacctaattcgaggagtgtccgtgcttcata 44860449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 5409836 - 5409770
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    ||||||||||||||||||||| ||||  |||||||||||||||| |||||  |||||||||||||||    
T  5409836 gtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatagg 5409770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 9778559 - 9778625
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    ||||||||||| ||||||||| ||||  ||||||||||||||||||||||  |||||||||||||||    
T  9778559 gtgtcggacacaacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttcatagg 9778625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 25822723 - 25822785
Alignment:
Q  21 tcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    |||||||||||||||||||||||| |||||| |||||||| ||||||  |||||| |||||||    
T  25822723 tcggacacgacacgtgtctgacatcgggacatgcctaatctaaggagtgtccgtgtttcatag 25822785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 29763187 - 29763129
Alignment:
Q  25 acacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    |||||||||||||| |||||  ||||||||||||||| |||||  ||||||||||||||    
T  29763187 acacgacacgtgtccgacatcaggacacgcctaatccgaggagtgtccgtgcttcatag 29763129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 598262 - 598327
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||| ||||||||||||||| ||||  |||||||||||||||| || ||  ||||||||||||||    
T  598262 gtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 24339707 - 24339772
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    |||||||||||||||||| || ||||  |||||||||||||||| |||||   |||||||||||||    
T  24339707 gtgtcggacacgacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgcttcatag 24339772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 43027469 - 43027404
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||| ||||||||||||||| ||||  |||||||||||||||| | |||  ||||||||||||||    
T  43027469 gtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgcttcatag 43027404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 15680863 - 15680929
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    ||||||||||||||||||||| ||||  | |||||| ||||| | |||||  |||||||||||||||    
T  15680863 gtgtcggacacgacacgtgtccgacaccgagacacgtctaattcgaggagtgtccgtgcttcatagg 15680929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 32094020 - 32093954
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattggg-acacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||||||||||||| ||||  ||| ||||||||||||| |||||  | ||||||||||||    
T  32094020 gtgtcggacacgacacgtgtccgacaccggggacacgcctaatccgaggagtgttcgtgcttcatag 32093954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 21880206 - 21880271
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    |||||||||||||||| |||| ||||   ||||||||||||||| || ||  ||||||||||||||    
T  21880206 gtgtcggacacgacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcatag 21880271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 25481956 - 25482021
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||||| | ||||| |||||||  |||||| |||| ||| ||| |||||||||||||||    
T  25481956 gtgtcggacacgatatgtgtccgacattgaaacacgcttaattcaaagagtatccgtgcttcatag 25482021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 20549845 - 20549909
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcata 82  Q
    ||||||||||| |||| |||| |||| || |||||||||||||| |||||   ||||||||||||    
T  20549845 gtgtcggacacaacacatgtccgacaatgagacacgcctaatccgaggagtgcccgtgcttcata 20549909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 21864863 - 21864927
Alignment:
Q  19 tgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    |||||||||||||||||||| ||||  |||||||| ||||| | |||||  || |||||||||||    
T  21864863 tgtcggacacgacacgtgtccgacaccgggacacgtctaattcgaggagtgtctgtgcttcatag 21864927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 32287468 - 32287404
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcata 82  Q
    |||||||||| |||| ||||| ||||  ||||||| |||||||| |||||  |||||||||||||    
T  32287468 gtgtcggacatgacaagtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 5414167 - 5414101
Alignment:
Q  17 agtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    |||||||||||||||||||||||||||  ||||||| ||| ||||||||||  ||||||||||||||    
T  5414167 agtgtcggacacgacacgtgtctgacacagggacacaccttatccaaggagtgtccgtgcttcatag 5414101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 23292991 - 23292926
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||||||||||||| ||||  |||||||||||||||| |||||  ||||||||||||||    
T  23292991 gtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 23292926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 30982872 - 30982808
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcata 82  Q
    ||||| ||||||||||||||| ||||  |||||||||||||||||| |||  |||||||||||||    
T  30982872 gtgtcagacacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgcttcata 30982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 19500852 - 19500786
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    |||||||||||||||||  ||||| |  | | |||||||||||||||||| ||||||||||||||||    
T  19500852 gtgtcggacacgacacgcctctgataccgaggcacgcctaatccaaggagtatccgtgcttcatagg 19500786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 24613695 - 24613629
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    ||||| ||||||||||||||||||||   ||||||| ||||||| |||||  |||||||||||||||    
T  24613695 gtgtcagacacgacacgtgtctgacaccaggacacgtctaatcctaggagtgtccgtgcttcatagg 24613629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 49190144 - 49190206
Alignment:
Q  111 tggtccaatggatattggataggctctgctaccacattagaatttgagttcagccaaactcaa 173  Q
    |||||||| |||| |||||||||||||| |||||  |||||||||| ||| ||||||||||||    
T  49190144 tggtccaacggatcttggataggctctgataccatcttagaatttgggttgagccaaactcaa 49190206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 12895279 - 12895214
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||||||| || || ||||| |||||||||||||||| |||||  | ||||||||||||    
T  12895279 gtgtcggacacgacatgtatccgacatcgggacacgcctaatccgaggagtgttcgtgcttcatag 12895214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 19482738 - 19482799
Alignment:
Q  23 ggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    |||||||||||||||| |||| |||||||| |||||||| |||||  | |||||||||||||    
T  19482738 ggacacgacacgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcatagg 19482799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 28964253 - 28964188
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    |||||||||||||||| | || |||| ||||||||||||||||| |||||  ||| ||||||||||    
T  28964253 gtgtcggacacgacacatatccgacactgggacacgcctaatccgaggagtgtccatgcttcatag 28964188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 3947766 - 3947702
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcata 82  Q
    ||||||||||||||||||||| ||||   |||||| |||||||| |||||  |||||||||||||    
T  3947766 gtgtcggacacgacacgtgtccgacaccaggacacacctaatccgaggagtgtccgtgcttcata 3947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 29205527 - 29205587
Alignment:
Q  23 ggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||| |||| |||| ||||||||||||||||| |||||  | ||||||||||||    
T  29205527 ggacacgacacatgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcatag 29205587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 2626009 - 2625958
Alignment:
Q  33 cgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    |||||| |||||  ||||||||||||| ||||||| ||||||||||||||||    
T  2626009 cgtgtccgacatcaggacacgcctaattcaaggagtatccgtgcttcatagg 2625958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 28084589 - 28084640
Alignment:
Q  29 gacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttca 80  Q
    |||||||||| |||| ||||||||||||||||| |||||  |||||||||||    
T  28084589 gacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 28084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 715603 - 715545
Alignment:
Q  25 acacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||| |||| ||||  |||||||||||||||| |||||  ||||||||||||||    
T  715603 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 715545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 752929 - 752871
Alignment:
Q  25 acacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||| |||| ||||  |||||||||||||||| |||||  ||||||||||||||    
T  752929 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 752871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 221
Target Start/End: Complemental strand, 10364758 - 10364684
Alignment:
Q  147 ttagaatttgagttcagccaaactcaacccatacaaaatcgacttgtatggtgagtactgtctccacttataaac 221  Q
    |||||||||||||| ||   ||||||| |||||||||| || ||| ||  |||||||||||||||| ||||||||    
T  10364758 ttagaatttgagttgagtttaactcaatccatacaaaaccggcttctaaagtgagtactgtctccatttataaac 10364684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 36635383 - 36635449
Alignment:
Q  17 agtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    |||||| ||||||||||| ||| ||||  |||||||||||||||| | |||  ||||||||||||||    
T  36635383 agtgtcagacacgacacgcgtcagacaccgggacacgcctaatccgaagagtgtccgtgcttcatag 36635449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 18966567 - 18966628
Alignment:
Q  22 cggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||| ||||||||| ||||  |||| |||||||||| ||||||  ||||||||||||||    
T  18966567 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtccgtgcttcatag 18966628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 206
Target Start/End: Original strand, 24232028 - 24232117
Alignment:
Q  117 aatggatattggataggctctgctaccacattagaatttgagttcagccaaactcaacccatacaaaatcgacttgtatggtgagtactg 206  Q
    ||||||| ||| |||||||||| | |||   ||||||||  |||  ||| |||||||||| ||||||| |||||||||||||||| ||||    
T  24232028 aatggatcttgtataggctctgatgccatcatagaatttaggttgggcctaactcaacccttacaaaaccgacttgtatggtgagaactg 24232117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 848016 - 848080
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcata 82  Q
    ||||||||||||| |||||||  |||  ||||||| ||||||||||||||  |||||| ||||||    
T  848016 gtgtcggacacgaaacgtgtcgaacaccgggacacacctaatccaaggagtgtccgtgtttcata 848080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 14465070 - 14465006
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcata 82  Q
    ||||| ||||||||||||||  |||| ||||||||| ||||||  |||||  |||||||||||||    
T  14465070 gtgtcagacacgacacgtgttcgacactgggacacgtctaatctgaggagtgtccgtgcttcata 14465006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 55253369 - 55253325
Alignment:
Q  178 tacaaaatcgacttgtatggtgagtactgtctccacttataaaca 222  Q
    ||||||| ||||||||| |||||| |||||||| |||||||||||    
T  55253369 tacaaaaccgacttgtaaggtgaggactgtctctacttataaaca 55253325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 20503496 - 20503584
Alignment:
Q  1 attcagtgtaattacaagtgtcgg------acacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||||||||||||||||      ||||||||| |||||||||  |||||||||||||||| |||||  ||||||||||||||    
T  20503496 attcagtgtaattacaagtgtcggtgttggacacgacacatgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 20503584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 28918032 - 28918120
Alignment:
Q  1 attcagtgtaattacaagtgtcgg--------acacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcat 81  Q
    ||||||||||||||||||||||||        |||||||||||||| |||| |||||||||||||||||||||||  ||| ||||||||    
T  28918032 attcagtgtaattacaagtgtcggtgtcgtggacacgacacgtgtccgacactgggacacgcctaatccaaggagtgtccctgcttcat 28918120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 41961641 - 41961578
Alignment:
Q  21 tcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    |||||||||||||||||| |||| ||||||||||||||||| || ||  |||||||||||||||    
T  41961641 tcggacacgacacgtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcatagg 41961578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 10955006 - 10955074
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggagga---tccgtgcttcatag 83  Q
    ||||||||||||||||||||| |||| ||||||||||||||||| ||||| |   ||||||||||||||    
T  10955006 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 10955074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 13845530 - 13845465
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||||| ||||||||||||  | ||||||||| ||||||||||  ||||||||||||||    
T  13845530 gtgtcggacacgagacgtgtctgacacggagacacgccttatccaaggagtgtccgtgcttcatag 13845465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 55401129 - 55401194
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||||||||||||| ||||  | |||||||||||||| |||||  ||||||||||||||    
T  55401129 gtgtcggacacgacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 55401194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 14209178 - 14209244
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    ||||||||||||||||||||  ||||| |||| || ||||||||||| ||  |||||||||||||||    
T  14209178 gtgtcggacacgacacgtgtacgacatcgggatacacctaatccaagaagtgtccgtgcttcatagg 14209244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 40993340 - 40993274
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    |||||||||||||||| |||| ||||  |||||||||||||||| |||||  ||| |||||||||||    
T  40993340 gtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcatagg 40993274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 7171555 - 7171604
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggag 67  Q
    ||||||||||||||||||||| ||||  | ||||||||||||||||||||    
T  7171555 gtgtcggacacgacacgtgtccgacaccgcgacacgcctaatccaaggag 7171604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 14216956 - 14217021
Alignment:
Q  17 agtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcata 82  Q
    |||||||||||||||||||||  |||| |||||||| |||||||| || ||  |||||||||||||    
T  14216956 agtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14217021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 14223085 - 14223150
Alignment:
Q  17 agtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcata 82  Q
    |||||||||||||||||||||  |||| |||||||| |||||||| || ||  |||||||||||||    
T  14223085 agtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14223150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 15864886 - 15864950
Alignment:
Q  18 gtgtcggacac-gacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcata 82  Q
    ||||||||||| |||||||||||||||  |||||||||||||||||| |||  |||||||||||||    
T  15864886 gtgtcggacaccgacacgtgtctgacac-gggacacgcctaatccaaagagtgtccgtgcttcata 15864950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 16000008 - 15999951
Alignment:
Q  25 acacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcata 82  Q
    |||||||||||||| ||||  ||||||||||||||||||||||  ||||||| |||||    
T  16000008 acacgacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcatcata 15999951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 27505305 - 27505370
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||| ||||||||||||||| ||||  |||||| ||||||||| |||||  ||||||||||||||    
T  27505305 gtgtctgacacgacacgtgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcatag 27505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 35222992 - 35223057
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    |||||||||| |||||||||||||||  ||||||||| | |||| |||||  ||||||||||||||    
T  35222992 gtgtcggacatgacacgtgtctgacacggggacacgctttatccgaggagtgtccgtgcttcatag 35223057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 34185116 - 34185052
Alignment:
Q  19 tgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||| |||| ||||| ||||  |||||||||||||||| |||||  ||||||||||||||    
T  34185116 tgtcggacaagacatgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 34185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 4987285 - 4987222
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcat 81  Q
    |||| |||||||||||||||| ||||  |||||||||||||||| |||||  ||||| ||||||    
T  4987285 gtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 11666015 - 11666070
Alignment:
Q  24 gacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttc 79  Q
    |||||||||||||||||| || || ||||||||||| |||||||  ||||||||||    
T  11666015 gacacgacacgtgtctgatatcggaacacgcctaattcaaggagtgtccgtgcttc 11666070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 35312085 - 35312144
Alignment:
Q  1 attcagtgtaattacaagtgtcggacacgacacgtgtctgacattgggacacgcctaatc 60  Q
    ||||||||||||||||||||||||| | ||||  ||||||||| || ||||| |||||||    
T  35312085 attcagtgtaattacaagtgtcggataagacatatgtctgacactgagacacacctaatc 35312144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 2941612 - 2941658
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaag 64  Q
    ||||||||||||||||||||||||||| |||| | |||| |||||||    
T  2941612 gtgtcggacacgacacgtgtctgacatggggatatgccttatccaag 2941658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 8842383 - 8842448
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||| |||||||||| |||  || |||| |||||||||||||| |||||  ||||||||||||||    
T  8842383 gtgtcagacacgacacatgttagatattgagacacgcctaatccgaggagtgtccgtgcttcatag 8842448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 8662 - 8721
Alignment:
Q  25 acacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    |||||||||||||| |||| ||||| |||||||||||||||||  |||||||||||||||    
T  8662 acacgacacgtgtccgacactgggatacgcctaatccaaggagtgtccgtgcttcatagg 8721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 14561 - 14646
Alignment:
Q  1 attcagtgtaattacaagtg---tcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||||||||||||   |||||||||||||||||| ||||  | ||||||||||||| ||||||  | ||||||||||||    
T  14561 attcagtgtaattacaagtggtgtcggacacgacacgtgtccgacaccgagacacgcctaatcgaaggagtgtacgtgcttcatag 14646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 13460 - 13523
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcat 81  Q
    ||||||||||||||||| |||||||| | |||||| ||||||||||||||  ||||||||||||    
T  13460 gtgtcggacacgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttcat 13523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 21867 - 21804
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcat 81  Q
    ||||||||||||||||| |||||||| | |||||| ||||||||||||||  ||||||||||||    
T  21867 gtgtcggacacgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttcat 21804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 5041 - 4976
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||||||||||||| ||||||| |||| ||||||||| |||||  || |||||||||||    
T  5041 gtgtcggacacgacacgtgtccgacattgagacatgcctaatccgaggagtgtctgtgcttcatag 4976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 241659 - 241724
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||||||||||||| ||||  |||||||||||||||| || ||  ||||||||||||||    
T  241659 gtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 241724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 3361 - 3428
Alignment:
Q  17 agtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    ||||||||||| ||||||||   |||| ||||||||||||||||| |||||  |||||||||||||||    
T  3361 agtgtcggacaagacacgtggtggacactgggacacgcctaatccgaggagtgtccgtgcttcatagg 3428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 3843 - 3777
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    |||||||||||||||| |||| ||||| | |||||||||||||| |||||  ||| |||||||||||    
T  3843 gtgtcggacacgacacatgtccgacatcgagacacgcctaatccgaggagtgtccttgcttcatagg 3777  T

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Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 8852 - 8917
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||||||||||||||| ||||  | |||||||||||||  |||||  ||||||||||||||    
T  8852 gtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggagtctccgtgcttcatag 8917  T

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Target: scaffold0652 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 467 - 403
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcata 82  Q
    |||||||||||||| |||||| ||||  ||||||| |||||||| |||||  |||||||||||||    
T  467 gtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 403  T

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Target: scaffold0623 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 5990 - 5926
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcata 82  Q
    |||||| |||||||||||||||||||  | ||||||||| ||||||||||  ||||||| |||||    
T  5990 gtgtcgaacacgacacgtgtctgacacagagacacgccttatccaaggagtgtccgtgcctcata 5926  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 92876 - 92940
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcata 82  Q
    |||||||||||||||| |||| ||||   ||||||||||||||| |||||  |||||||||||||    
T  92876 gtgtcggacacgacacatgtcggacacctggacacgcctaatccgaggagtgtccgtgcttcata 92940  T

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Target: scaffold0036 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 9741 - 9678
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcat 81  Q
    ||||| |||||||||| |||||||||| ||||||||  |||||| |||||  ||||||||||||    
T  9741 gtgtcagacacgacacttgtctgacatcgggacacgtataatccgaggagtgtccgtgcttcat 9678  T

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Target: scaffold0793 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 4879 - 4821
Alignment:
Q  25 acacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    ||||||||| |||| ||||  |||||||||||||||| |||||  ||||||||||||||    
T  4879 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 4821  T

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Target: scaffold0450 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 8626 - 8564
Alignment:
Q  21 tcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatag 83  Q
    |||||||||| ||||||| |||| ||| ||||||||||| | |||||  ||||||||||||||    
T  8626 tcggacacgatacgtgtccgacactggtacacgcctaattcgaggagtgtccgtgcttcatag 8564  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 71790 - 71856
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    ||||||||||| ||||||||| ||||  |||||||| ||||||| |||||  || ||||||||||||    
T  71790 gtgtcggacacaacacgtgtccgacaccgggacacgactaatccgaggagtgtcggtgcttcatagg 71856  T

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Target: scaffold0083 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 45535 - 45490
Alignment:
Q  18 gtgtcggacacgacacgtgtctgacattgggacacgcctaatccaa 63  Q
    ||||||||||||||||||||||||||  | |||| |||||||||||    
T  45535 gtgtcggacacgacacgtgtctgacaccgcgacatgcctaatccaa 45490  T

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Target: scaffold0168 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 21243 - 21279
Alignment:
Q  48 gacacgcctaatccaaggaggatccgtgcttcatagg 84  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  21243 gacacgcctaatccgaggagtatccgtgcttcatagg 21279  T

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