View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17521_high_18 (Length: 250)
Name: NF17521_high_18
Description: NF17521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17521_high_18 |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 31432778 - 31432545
Alignment:
| Q |
1 |
catcatttttgtttagctactgatacaaattggagcttcctaattttcacaaggtgtctacattgagacgtggaaaaatgtatttcaccaccaatctaaa |
100 |
Q |
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| T |
31432778 |
catcatttttgtttagctactgatacaaattggagcttcctaattttcacaaggtgtctacattgaggcgcggaaaaatgtatgtcgccaccaatctaaa |
31432679 |
T |
|
| Q |
101 |
cataggctacatcattctaatgatacctccaatgaaatacgtactcccactggataatttgcttatcaaaataactatctcggtcatctttttcaacaca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
31432678 |
cataggctacatcattctaatgatacctccaatgaaatacgtactcccactggataatttgcttatcaaattaactatctcggtcatctttttcaacaca |
31432579 |
T |
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| Q |
201 |
aaagagcacaagttcaattatgtttacctataga |
234 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
31432578 |
aaagagcacaagttcaattatgtttacctataga |
31432545 |
T |
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