View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17521_low_16 (Length: 303)
Name: NF17521_low_16
Description: NF17521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17521_low_16 |
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Alignment Details
Target: chr1 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 44 - 288
Target Start/End: Complemental strand, 7804253 - 7803995
Alignment:
| Q |
44 |
tgaagtaaccaatcttatttaacaaaataaagtttggttgttgctgtattcatcgtggatctattttggagtgaataaattatggttgagaaagctaaca |
143 |
Q |
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| T |
7804253 |
tgaagtaaccgatcttatttaacaaaataaagtttggttgttgttgtattcatcgtggatctattttggagtgaataaattatggttgagaaagctaaca |
7804154 |
T |
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| Q |
144 |
aaaatcttgatgccat-----gacttccctaacacaacagttatgacttgag----caaaaattaaaacaacggttatgataaagagaattaagttgaag |
234 |
Q |
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| T |
7804153 |
aaaatcttgatgccatgagtagacttccctaacacaacagttatgacttgagaaaaaaaaaattaaaaccacggttatgataaagagaattaagttgaag |
7804054 |
T |
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| Q |
235 |
acaaattttggtgggtgg-----ggcatagctcctaattaatcaataccttaattatat |
288 |
Q |
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| T |
7804053 |
acaaattttggtgggtggggcatggcatagctcctaattaatcaataccttaattatat |
7803995 |
T |
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