View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17521_low_25 (Length: 203)
Name: NF17521_low_25
Description: NF17521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17521_low_25 |
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Alignment Details
Target: chr2 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 26 - 185
Target Start/End: Original strand, 41079785 - 41079944
Alignment:
| Q |
26 |
atgaatataatgaatctcacttaagagtgagaagaaactcagcaagtttgagtttgaaagtgcttggatcttgaatattgttaatccaaccgtacttctc |
125 |
Q |
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| T |
41079785 |
atgaatataatgaatctcacttaagagtgagaagaaactcagcaagtttgagtttgaaagtgcttggatcttgaatattgttaatccaaccgtacttctc |
41079884 |
T |
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| Q |
126 |
catgaatgggttggccaaagagtgtggtggatagtaatcaatgcaatcgtcccacacatt |
185 |
Q |
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| T |
41079885 |
catgaatgggttggccaaagagtgtggtggatagtaatcaatgcaatcgtcccacacatt |
41079944 |
T |
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