View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17522_high_23 (Length: 309)

Name: NF17522_high_23
Description: NF17522
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17522_high_23
NF17522_high_23
[»] chr5 (14 HSPs)
chr5 (1-300)||(22750950-22751249)
chr5 (9-252)||(38144532-38144773)
chr5 (9-247)||(28370055-28370291)
chr5 (9-247)||(19512204-19512441)
chr5 (56-257)||(23528497-23528695)
chr5 (183-295)||(23111150-23111264)
chr5 (183-247)||(18407944-18408008)
chr5 (192-248)||(22438747-22438803)
chr5 (193-248)||(19236900-19236955)
chr5 (195-248)||(22461158-22461211)
chr5 (195-248)||(22467782-22467835)
chr5 (193-248)||(20781744-20781799)
chr5 (219-248)||(17021913-17021942)
chr5 (192-252)||(42961566-42961626)
[»] chr7 (27 HSPs)
chr7 (1-300)||(18873169-18873468)
chr7 (1-260)||(15167984-15168242)
chr7 (1-243)||(10895795-10896037)
chr7 (9-295)||(14422802-14423089)
chr7 (1-252)||(12709839-12710090)
chr7 (1-252)||(13122910-13123161)
chr7 (35-252)||(13743552-13743768)
chr7 (9-247)||(16009395-16009631)
chr7 (56-252)||(12590639-12590832)
chr7 (56-252)||(13007299-13007491)
chr7 (51-245)||(16677152-16677348)
chr7 (51-245)||(17651388-17651584)
chr7 (192-247)||(11382871-11382926)
chr7 (192-247)||(11389348-11389403)
chr7 (192-248)||(20311051-20311107)
chr7 (192-248)||(21230959-21231015)
chr7 (184-247)||(13679485-13679548)
chr7 (193-248)||(2971254-2971309)
chr7 (193-248)||(20906461-20906516)
chr7 (193-247)||(11311059-11311113)
chr7 (212-252)||(831629-831669)
chr7 (212-252)||(1196809-1196849)
chr7 (212-252)||(34958578-34958618)
chr7 (191-247)||(46625961-46626017)
chr7 (193-248)||(29181109-29181164)
chr7 (195-248)||(31155396-31155449)
chr7 (196-248)||(16091078-16091130)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-252)||(11846-12097)
scaffold0026 (9-248)||(111504-111741)
[»] chr3 (25 HSPs)
chr3 (1-260)||(14762746-14763004)
chr3 (1-245)||(38310802-38311046)
chr3 (15-245)||(20247791-20248021)
chr3 (8-245)||(24192771-24193009)
chr3 (9-247)||(9534146-9534382)
chr3 (9-248)||(23370505-23370743)
chr3 (57-248)||(24933828-24934016)
chr3 (70-252)||(41455093-41455272)
chr3 (37-245)||(55499104-55499313)
chr3 (112-252)||(16801463-16801602)
chr3 (186-247)||(18929239-18929300)
chr3 (183-247)||(17240513-17240577)
chr3 (193-248)||(13302240-13302295)
chr3 (193-248)||(13323787-13323842)
chr3 (193-248)||(12033444-12033499)
chr3 (193-248)||(13312896-13312951)
chr3 (193-248)||(17131732-17131787)
chr3 (193-248)||(51301589-51301644)
chr3 (134-248)||(10389443-10389557)
chr3 (134-248)||(10414532-10414646)
chr3 (134-248)||(10421202-10421316)
chr3 (193-248)||(14865846-14865901)
chr3 (213-248)||(23392819-23392854)
chr3 (191-245)||(16801027-16801081)
chr3 (212-248)||(2247649-2247685)
[»] scaffold1773 (1 HSPs)
scaffold1773 (1-252)||(988-1237)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-252)||(49989-50238)
[»] scaffold0029 (1 HSPs)
scaffold0029 (28-252)||(111717-111942)
[»] chr4 (16 HSPs)
chr4 (1-252)||(8045828-8046078)
chr4 (1-252)||(11847916-11848173)
chr4 (134-248)||(53483646-53483760)
chr4 (192-248)||(15408139-15408195)
chr4 (191-247)||(8834895-8834951)
chr4 (191-247)||(13888641-13888697)
chr4 (193-245)||(14486661-14486713)
chr4 (191-247)||(15245215-15245271)
chr4 (191-242)||(22724691-22724742)
chr4 (191-247)||(15308120-15308176)
chr4 (212-252)||(15747552-15747592)
chr4 (193-248)||(16146830-16146885)
chr4 (193-248)||(27906266-27906321)
chr4 (217-247)||(15069781-15069811)
chr4 (217-247)||(15076381-15076411)
chr4 (191-248)||(14912081-14912138)
[»] chr6 (30 HSPs)
chr6 (14-260)||(23057760-23058005)
chr6 (1-252)||(29614142-29614393)
chr6 (9-295)||(23839016-23839303)
chr6 (35-247)||(4477700-4477912)
chr6 (9-248)||(10986180-10986418)
chr6 (37-252)||(18800282-18800497)
chr6 (113-252)||(930091-930229)
chr6 (56-252)||(12168230-12168422)
chr6 (56-252)||(19287139-19287331)
chr6 (56-252)||(19785865-19786057)
chr6 (56-252)||(19878323-19878515)
chr6 (56-252)||(19884099-19884291)
chr6 (37-245)||(21565214-21565422)
chr6 (165-248)||(34639986-34640069)
chr6 (165-248)||(34646660-34646743)
chr6 (134-248)||(25469704-25469816)
chr6 (192-248)||(24512843-24512899)
chr6 (195-247)||(9187498-9187550)
chr6 (191-247)||(25348486-25348542)
chr6 (191-279)||(25397172-25397261)
chr6 (191-245)||(25598643-25598697)
chr6 (183-248)||(31252413-31252478)
chr6 (191-247)||(19471335-19471391)
chr6 (191-245)||(2286769-2286823)
chr6 (159-248)||(11288668-11288758)
chr6 (213-247)||(18659450-18659484)
chr6 (213-247)||(24441673-24441707)
chr6 (195-248)||(15458492-15458545)
chr6 (195-248)||(15465087-15465140)
chr6 (220-248)||(28288509-28288537)
[»] scaffold0924 (1 HSPs)
scaffold0924 (1-252)||(746-997)
[»] scaffold0025 (1 HSPs)
scaffold0025 (8-245)||(14398-14635)
[»] scaffold0117 (2 HSPs)
scaffold0117 (1-252)||(1893-2143)
scaffold0117 (1-252)||(8570-8820)
[»] chr1 (16 HSPs)
chr1 (9-295)||(20436974-20437261)
chr1 (134-252)||(41111977-41112094)
chr1 (183-302)||(32651563-32651682)
chr1 (183-247)||(18712790-18712854)
chr1 (192-247)||(19663517-19663572)
chr1 (191-247)||(20805320-20805376)
chr1 (192-247)||(11158093-11158148)
chr1 (191-245)||(10811785-10811839)
chr1 (193-248)||(20851132-20851187)
chr1 (193-248)||(20857759-20857814)
chr1 (193-248)||(21706276-21706331)
chr1 (193-248)||(21710818-21710873)
chr1 (217-247)||(24476350-24476380)
chr1 (217-247)||(25091418-25091448)
chr1 (213-246)||(18271338-18271371)
chr1 (213-246)||(18275992-18276025)
[»] chr8 (15 HSPs)
chr8 (9-248)||(44477441-44477678)
chr8 (9-248)||(44492599-44492836)
chr8 (1-252)||(23866423-23866674)
chr8 (1-245)||(8727735-8727979)
chr8 (56-252)||(17054458-17054650)
chr8 (191-302)||(18614271-18614382)
chr8 (9-156)||(27940946-27941091)
chr8 (183-295)||(23482003-23482117)
chr8 (191-247)||(39364919-39364975)
chr8 (193-260)||(29643374-29643440)
chr8 (192-248)||(14056563-14056619)
chr8 (192-248)||(25111976-25112032)
chr8 (193-248)||(24320670-24320725)
chr8 (191-247)||(21931696-21931752)
chr8 (192-252)||(27940847-27940907)
[»] chr2 (17 HSPs)
chr2 (9-260)||(19661442-19661690)
chr2 (9-247)||(6483536-6483772)
chr2 (9-247)||(6487003-6487239)
chr2 (51-252)||(26583687-26583886)
chr2 (37-245)||(23089057-23089265)
chr2 (37-245)||(23878853-23879060)
chr2 (37-247)||(23101463-23101673)
chr2 (134-248)||(5706023-5706137)
chr2 (183-247)||(23265133-23265197)
chr2 (183-247)||(23280201-23280265)
chr2 (186-247)||(21908353-21908414)
chr2 (191-247)||(24661576-24661632)
chr2 (193-248)||(10577-10632)
chr2 (193-248)||(25180929-25180984)
chr2 (193-248)||(26885183-26885237)
chr2 (195-248)||(23168298-23168351)
chr2 (195-248)||(23579555-23579608)
[»] scaffold0553 (1 HSPs)
scaffold0553 (9-248)||(10195-10433)
[»] scaffold0544 (1 HSPs)
scaffold0544 (9-248)||(1525-1763)
[»] scaffold0247 (1 HSPs)
scaffold0247 (37-252)||(11186-11401)
[»] scaffold0058 (1 HSPs)
scaffold0058 (8-252)||(109-350)
[»] scaffold0090 (1 HSPs)
scaffold0090 (8-252)||(17985-18229)
[»] scaffold0456 (4 HSPs)
scaffold0456 (165-300)||(8049-8184)
scaffold0456 (165-300)||(904-1039)
scaffold0456 (8-102)||(806-899)
scaffold0456 (8-102)||(7951-8044)
[»] scaffold0154 (1 HSPs)
scaffold0154 (128-252)||(30792-30917)
[»] scaffold0476 (1 HSPs)
scaffold0476 (37-245)||(3295-3504)
[»] scaffold0796 (2 HSPs)
scaffold0796 (57-252)||(1728-1920)
scaffold0796 (57-252)||(5751-5943)
[»] scaffold0077 (1 HSPs)
scaffold0077 (37-245)||(3624-3832)
[»] scaffold0004 (2 HSPs)
scaffold0004 (183-294)||(116887-116998)
scaffold0004 (213-246)||(60441-60474)
[»] scaffold0634 (1 HSPs)
scaffold0634 (1-88)||(3471-3558)
[»] scaffold0129 (1 HSPs)
scaffold0129 (136-248)||(45274-45386)
[»] scaffold0222 (1 HSPs)
scaffold0222 (183-247)||(16811-16875)
[»] scaffold0461 (1 HSPs)
scaffold0461 (183-247)||(8-72)
[»] scaffold0310 (1 HSPs)
scaffold0310 (192-248)||(17643-17699)
[»] scaffold0146 (1 HSPs)
scaffold0146 (183-247)||(13623-13687)
[»] scaffold0107 (1 HSPs)
scaffold0107 (192-248)||(40531-40587)
[»] scaffold0020 (1 HSPs)
scaffold0020 (183-247)||(101928-101992)
[»] scaffold0019 (1 HSPs)
scaffold0019 (192-248)||(135473-135529)
[»] scaffold0139 (1 HSPs)
scaffold0139 (192-300)||(14944-15052)
[»] scaffold0235 (1 HSPs)
scaffold0235 (194-246)||(22594-22646)
[»] scaffold0124 (2 HSPs)
scaffold0124 (192-247)||(34276-34331)
scaffold0124 (191-248)||(35438-35495)
[»] scaffold0138 (1 HSPs)
scaffold0138 (191-247)||(12296-12352)
[»] scaffold0317 (1 HSPs)
scaffold0317 (184-247)||(1378-1441)
[»] scaffold0815 (1 HSPs)
scaffold0815 (196-252)||(1453-1509)
[»] scaffold0096 (1 HSPs)
scaffold0096 (191-251)||(39503-39563)
[»] scaffold0348 (1 HSPs)
scaffold0348 (193-248)||(9336-9391)
[»] scaffold0127 (1 HSPs)
scaffold0127 (193-248)||(10239-10294)
[»] scaffold0028 (1 HSPs)
scaffold0028 (195-300)||(69749-69855)
[»] scaffold0023 (1 HSPs)
scaffold0023 (193-248)||(135438-135493)
[»] scaffold0001 (1 HSPs)
scaffold0001 (193-248)||(493028-493082)
[»] scaffold2054 (1 HSPs)
scaffold2054 (159-252)||(680-774)
[»] scaffold1318 (1 HSPs)
scaffold1318 (193-247)||(1913-1967)
[»] scaffold0610 (1 HSPs)
scaffold0610 (233-302)||(6540-6609)
[»] scaffold0609 (1 HSPs)
scaffold0609 (183-248)||(5857-5922)
[»] scaffold0335 (1 HSPs)
scaffold0335 (191-247)||(2628-2684)
[»] scaffold0261 (1 HSPs)
scaffold0261 (193-248)||(23569-23624)
[»] scaffold0053 (2 HSPs)
scaffold0053 (193-248)||(79490-79545)
scaffold0053 (214-281)||(79057-79125)
[»] scaffold0790 (1 HSPs)
scaffold0790 (219-252)||(5480-5513)
[»] scaffold0481 (1 HSPs)
scaffold0481 (201-246)||(676-721)
[»] scaffold0249 (1 HSPs)
scaffold0249 (195-248)||(13894-13947)
[»] scaffold0600 (1 HSPs)
scaffold0600 (191-247)||(732-788)
[»] scaffold0180 (1 HSPs)
scaffold0180 (198-247)||(11630-11681)
[»] scaffold0034 (1 HSPs)
scaffold0034 (193-245)||(73285-73337)
[»] scaffold0031 (2 HSPs)
scaffold0031 (191-247)||(121902-121958)
scaffold0031 (191-247)||(132778-132834)


Alignment Details
Target: chr5 (Bit Score: 240; Significance: 1e-133; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 22750950 - 22751249
Alignment:
Q  1 tacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||||||| ||| ||||| |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22750950 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 22751049  T
Q  101 aagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttca 200  Q
    ||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  22751050 aagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttca 22751149  T
Q  201 gaaattatagattatgattattgagagatagtctcacccttaccttagttttagaagaaacgcacaacgaccggattctctgactctacttgttcatctc 300  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  22751150 gaaattatagattatgattatcgagagaaagtctcacccttaccttagttttagaagaaacgcacaacgaccggattctctgactatacttgttcttctc 22751249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 9 - 252
Target Start/End: Complemental strand, 38144773 - 38144532
Alignment:
Q  9 ttcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||| ||| ||||| || ||| ||||||||||| |||||||||| |||||  | |||||||||||||||||| ||||||| |||||||  ||||    
T  38144773 ttcatcaattcatccaatcaatcgtaa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaat 38144675  T
Q  109 tatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 208  Q
    || |||||||| |||||||| |||| |||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  38144674 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttccaaaattatgcaattaggtcaattttcagaaattat 38144576  T
Q  209 agattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  38144575 agattatgattattgagagatagtctcacccttaccttagtttt 38144532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 9 - 247
Target Start/End: Complemental strand, 28370291 - 28370055
Alignment:
Q  9 ttcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||| |||  |||| |||||| ||||||||||| |||||||||| |||||  | |||||||||||||||||| |||||||  ||||||  ||||    
T  28370291 ttcatcaattcatcccatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 28370193  T
Q  109 tatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 208  Q
    || |||||||| |||||||| |||| || ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  28370192 taacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 28370094  T
Q  209 agattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28370093 agattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 9 - 247
Target Start/End: Original strand, 19512204 - 19512441
Alignment:
Q  9 ttcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||| ||| ||||| |||||| ||||||||||| |||||||||| |||||  | |||||||||||||||||| |||||||  ||||||  ||||    
T  19512204 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaatagaat 19512302  T
Q  109 tatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaa-ctaagcaattaggtcaattttcagaaatta 207  Q
    || |||||||| |||||||| |||| || ||||||||||||| ||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  19512303 taacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 19512401  T
Q  208 tagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19512402 tagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 56 - 257
Target Start/End: Original strand, 23528497 - 23528695
Alignment:
Q  56 acagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatccta 155  Q
    ||||||||||||  ||||||| |||| |||| ||||||| ||| ||||  || || ||| ||| |||| ||||  || ||||||||||||||||| ||||    
T  23528497 acagcaacaacatggattaagatttcgttcttaacattaaattccaagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaacccta 23528594  T
Q  156 accctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttaga 255  Q
    ||  |||  ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23528595 actttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttaga 23528693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 183 - 295
Target Start/End: Complemental strand, 23111264 - 23111150
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt--tagaagaaacgcacaacgaccggattctc 280  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||    ||| ||| ||||||| | |||||||||    
T  23111264 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttaccttaatttagatgaacaaaagcacaacaatcggattctc 23111165  T
Q  281 tgactctacttgttc 295  Q
    |||||| ||||||||    
T  23111164 tgactccacttgttc 23111150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 18408008 - 18407944
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18408008 caattagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 22438803 - 22438747
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22438803 caattttcagaaattatacattatgattattgagagatagtctcacccttaccttag 22438747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 19236900 - 19236955
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19236900 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 19236955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 22461158 - 22461211
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  22461158 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22461211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 22467782 - 22467835
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  22467782 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22467835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 20781744 - 20781799
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||| ||| ||||| |||||||| ||||| || ||||||||||||||    
T  20781744 aattttcagaaatcatatattataattattgaaagataatcccacccttaccttag 20781799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 248
Target Start/End: Complemental strand, 17021942 - 17021913
Alignment:
Q  219 tattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||||||||||||||||    
T  17021942 tattgagagatagtctcacccttaccttag 17021913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 252
Target Start/End: Original strand, 42961566 - 42961626
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |||||||||||||| ||| ||||| || |||||  | ||| ||||||||||||||||||||    
T  42961566 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagtttt 42961626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 18873169 - 18873468
Alignment:
Q  1 tacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||||||| ||| ||||| |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18873169 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 18873268  T
Q  101 aagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttca 200  Q
    ||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  18873269 aagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttca 18873368  T
Q  201 gaaattatagattatgattattgagagatagtctcacccttaccttagttttagaagaaacgcacaacgaccggattctctgactctacttgttcatctc 300  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  18873369 gaaattatagattatgattatcgagagaaagtctcacccttaccttagttttagaagaaacgcacaacggccggattctctgactatacttgttcttctc 18873468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 15167984 - 15168242
Alignment:
Q  1 tacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||||||| ||| ||||| |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15167984 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 15168083  T
Q  101 aagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttca 200  Q
    ||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  15168084 aagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttca 15168183  T
Q  201 gaaattatagattatgattattgagagatagtctcacccttaccttagttttagaagaaa 260  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||    
T  15168184 gaaattatagattatgattatcgagagatagtctcacccttacctta-atttagaagaaa 15168242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 10896037 - 10895795
Alignment:
Q  1 tacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||||||| ||| ||||| |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10896037 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 10895938  T
Q  101 aagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttcc-aaaactaagcaattaggtcaattttc 199  Q
    ||| |||||| |||||||| |||||| ||||| ||||||||||||||||| |||||||| |||||||| |||| ||||||| ||||||||||||||||||    
T  10895937 aagagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttc 10895839  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttac 243  Q
    | ||||||||||||||||||||||||||||||||||||||||||    
T  10895838 aaaaattatagattatgattattgagagatagtctcacccttac 10895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 9 - 295
Target Start/End: Original strand, 14422802 - 14423089
Alignment:
Q  9 ttcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||| ||| ||||| |||||| ||||||||||| |||||||||| |||||| | |||||||||||||||||| ||||||| |||||||  ||||    
T  14422802 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaat 14422900  T
Q  109 tatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaa-ctaagcaattaggtcaattttcagaaatta 207  Q
    || |||||||| |||||||| |||| |||||||||||||||| ||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  14422901 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 14422999  T
Q  208 tagattatgattattgagagatagtctcacccttaccttagttt--tagaagaaacgcacaacgaccggattctctgactctacttgttc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||    ||| |||  |||||| | ||||||||||||||| ||||||||    
T  14423000 tagattatgattattgagagatagtctcacccttaccttagtttagatgaacaaaaacacaacaatcggattctctgactccacttgttc 14423089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 12710090 - 12709839
Alignment:
Q  1 tacacaaattcatcaattgatctaatcattcataaatttcaa-tcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatatta 99  Q
    |||||||||||||||||| ||| ||||| ||||||||| ||| ||| | || ||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  12710090 tacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaacaa-gattaagtttatattctgaacattatatta 12709992  T
Q  100 caagg-gaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaatttt 198  Q
    |||   |||||| ||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||    
T  12709991 caaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-ttt 12709893  T
Q  199 cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12709892 caggaattataaattatgattattgagagatagtctcacccttaccttagtttt 12709839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 13123161 - 13122910
Alignment:
Q  1 tacacaaattcatcaattgatctaatcattcataaatttcaa-tcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatatta 99  Q
    |||||||||||||||||| ||| ||||| ||||||||| ||| ||| | || ||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  13123161 tacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaacaa-gattaagtttatattctgaacattatatta 13123063  T
Q  100 caagg-gaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaatttt 198  Q
    |||   |||||| ||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||    
T  13123062 caaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-ttt 13122964  T
Q  199 cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13122963 caggaattataaattatgattattgagagatagtctcacccttaccttagtttt 13122910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 35 - 252
Target Start/End: Original strand, 13743552 - 13743768
Alignment:
Q  35 aatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttccctt 134  Q
    |||||||| |||| |||||||||||||| |||| ||||||||| |||| ||||||||  ||| ||||||  ||||| ||||||||||||||||||| |||    
T  13743552 aatttcaaccaatttatgatcacagcaataacatagattaagtcttcaatctgaacagcataatacaagaaaattaacatgatcattacccatttctctt 13743651  T
Q  135 cagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtct 234  Q
    || ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  13743652 cataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtct 13743750  T
Q  235 cacccttaccttagtttt 252  Q
    ||||||||||||||||||    
T  13743751 cacccttaccttagtttt 13743768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 247
Target Start/End: Original strand, 16009395 - 16009631
Alignment:
Q  9 ttcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||| ||| ||||| |||||| ||||||||| | |||||||||| |||||  | |||||||||||||||||| ||||||| |||||||  ||||    
T  16009395 ttcatcaattcatccaatcaatcataa-tttcaatcagtttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 16009493  T
Q  109 tatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 208  Q
    || |||||||| |||||||| |||| |||||||||||||||| | |||||| |||||||| ||||||||| | |||||||||||||||||||||||||||    
T  16009494 taacatgatcaatacccattcccct-cagaatcatcatcaaaccttaacccacaatttatcttccaaaaccatgcaattaggtcaattttcagaaattat 16009592  T
Q  209 agattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16009593 agattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 56 - 252
Target Start/End: Complemental strand, 12590832 - 12590639
Alignment:
Q  56 acagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatccta 155  Q
    ||||||||||||  ||||||| ||||||||| ||||||| ||| ||||  || || ||| ||| |||| ||||  || ||||||||||||||||| ||||    
T  12590832 acagcaacaacatggattaagctttcattcttaacattaaattccaagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaaacccta 12590735  T
Q  156 accctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||  |||  ||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12590734 actttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 12590639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 56 - 252
Target Start/End: Original strand, 13007299 - 13007491
Alignment:
Q  56 acagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatccta 155  Q
    ||||||||||||  ||||||| |||| |||| ||||||| ||| ||||  || || ||| ||| |||| ||||  || ||||||||||||||||| ||||    
T  13007299 acagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaacccta 13007395  T
Q  156 accctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||  |||  ||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13007396 actttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 13007491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 51 - 245
Target Start/End: Original strand, 16677152 - 16677348
Alignment:
Q  51 tgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaa 150  Q
    ||||||||||||||  | |||||| |  |||||||||||||| |  ||||||   | ||| |||||||||||| |  | | | ||| |||||||||||||    
T  16677152 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 16677251  T
Q  151 tcctaaccctcaattt-attttccaaaa-ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 245  Q
     ||||||||| ||||| || |||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16677252 ccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 51 - 245
Target Start/End: Original strand, 17651388 - 17651584
Alignment:
Q  51 tgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaa 150  Q
    ||||||||||||||  | |||||| |  |||||||||||||| |  ||||||   | ||| |||||||||||| |  | | | ||| |||||||||||||    
T  17651388 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 17651487  T
Q  151 tcctaaccctcaattt-attttccaaaa-ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 245  Q
     ||||||||| ||||| || |||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17651488 ccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 11382926 - 11382871
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11382926 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 11389403 - 11389348
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11389403 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 20311107 - 20311051
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  20311107 caattttcagaaattatacgttatgattattgagagatagtctcacccttaccttag 20311051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 21231015 - 21230959
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  21231015 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttag 21230959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 13679485 - 13679548
Alignment:
Q  184 aattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||| |||||||||| |||||||| || ||||| ||||| ||||||||||||||||||||||    
T  13679485 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 2971254 - 2971309
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  2971254 aattttcagaaattataaattatgactattgaaagataatcccacccttaccttag 2971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 20906516 - 20906461
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20906516 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20906461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 11311059 - 11311113
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||| ||||||| || | ||| |||||||||||||||||||||||||||||||    
T  11311059 aatttttagaaattctacactattattattgagagatagtctcacccttacctta 11311113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 831669 - 831629
Alignment:
Q  212 ttatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  831669 ttataattattgagagttagtctcacccttaccttagtttt 831629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 1196849 - 1196809
Alignment:
Q  212 ttatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  1196849 ttataattattgagagttagtctcacccttaccttagtttt 1196809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 34958578 - 34958618
Alignment:
Q  212 ttatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  34958578 ttataattattgagagttagtctcacccttaccttagtttt 34958618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 46625961 - 46626017
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||| ||||||||| ||||| || |||||||| |||||||||||||| ||||    
T  46625961 tcaattttccgaaattatatattataatcattgagagttagtctcacccttatctta 46626017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 29181164 - 29181109
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  29181164 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 29181109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 31155396 - 31155449
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  31155396 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 31155449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 16091078 - 16091130
Alignment:
Q  196 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  16091078 tttcagaaattacatattatgactattgaaagataatcccacccttaccttag 16091130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 208; Significance: 1e-114; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 12097 - 11846
Alignment:
Q  1 tacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12097 tacacaaattcatcaattcatccaatcactcataaatttcaatcaacttatgatcacagcaacaacaaagattaagttttcattctgaagattatattac 11998  T
Q  101 aagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttca 200  Q
    ||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||    
T  11997 aagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaactctcaatttattttccaaaactatgcaattaggtcaattttca 11898  T
Q  201 gaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11897 gaaattatagattatgattattgagagatagtctcacccttaccttagtttt 11846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 9 - 248
Target Start/End: Original strand, 111504 - 111741
Alignment:
Q  9 ttcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||| ||| ||||| |||||| ||||||||||| |||||||||| |||||  | |||||||||||||||||| ||||||| |||||||  ||||    
T  111504 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 111602  T
Q  109 tatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 208  Q
    || |||||||| |||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  111603 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 111701  T
Q  209 agattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  111702 agattatgattattgagagatagtctcacccttaccttag 111741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 14763004 - 14762746
Alignment:
Q  1 tacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||||||| ||| ||||| |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14763004 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 14762905  T
Q  101 aagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttca 200  Q
    ||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  14762904 aagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttca 14762805  T
Q  201 gaaattatagattatgattattgagagatagtctcacccttaccttagttttagaagaaa 260  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||    
T  14762804 gaaattatagattatgattatcgagagatagtctcacccttacctta-atttagaagaaa 14762746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 38311046 - 38310802
Alignment:
Q  1 tacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||| ||| ||| ||||| |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  38311046 tacacaaattcatccattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 38310947  T
Q  101 aagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttca 200  Q
    ||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||| ||||    
T  38310946 aagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatattca 38310847  T
Q  201 gaaattatagattatgattattgagagatagtctcacccttacct 245  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  38310846 gaaattatagattatgattatcgagagatagtctcacccttacct 38310802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 15 - 245
Target Start/End: Complemental strand, 20248021 - 20247791
Alignment:
Q  15 aattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcat 114  Q
    |||| ||| ||||| |||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||| |||    
T  20248021 aattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagaaaattaacat 20247922  T
Q  115 gatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagatta 214  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  20247921 gatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagatta 20247822  T
Q  215 tgattattgagagatagtctcacccttacct 245  Q
    |||||||||||||||||||||||||||||||    
T  20247821 tgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 8 - 245
Target Start/End: Original strand, 24192771 - 24193009
Alignment:
Q  8 attcatcaattgatctaatcattcataaatttcaatcaatgtatgat-cacagcaacaacaaagattaagttttcattctgaacattatattacaaggga 106  Q
    ||||||||||| ||| ||||| |||||  ||||||||| | |||||| |||||||||| || |||||||||||||||||||||||| | |||||||  ||    
T  24192771 attcatcaatttatccaatcaatcatat-tttcaatcagtttatgattcacagcaacagcatagattaagttttcattctgaacatcacattacaacaga 24192869  T
Q  107 attatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttcc-aaaactaagcaattaggtcaattttcagaaat 205  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  24192870 attaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaat 24192969  T
Q  206 tatagattatgattattgagagatagtctcacccttacct 245  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  24192970 tatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 9 - 247
Target Start/End: Original strand, 9534146 - 9534382
Alignment:
Q  9 ttcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||| ||| ||||| |||||| ||||||||||| |||||||||  |||||  | |||||||||||||||||| ||||||| |||||||  ||||    
T  9534146 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacgacaacagtatagattaagttttcattctaaacattacattacaacagaat 9534244  T
Q  109 tatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 208  Q
    || |||||||| |||||||| | || |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  9534245 taacatgatcaatacccattccact-cagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 9534343  T
Q  209 agattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||||||||||||||||||||||||    
T  9534344 agattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 9 - 248
Target Start/End: Complemental strand, 23370743 - 23370505
Alignment:
Q  9 ttcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||| ||| ||||| |||||| ||||||||||| |||||||||| |||||  | |||||||||||||||||| ||||||| |||||||  ||||    
T  23370743 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 23370645  T
Q  109 tatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaa-ctaagcaattaggtcaattttcagaaatta 207  Q
    || |||||||| |||||||| |||| |||||||||||||||| |||||||| |||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  23370644 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 23370546  T
Q  208 tagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  23370545 tagattatgattattgagagatagtcccacccttaccttag 23370505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 57 - 248
Target Start/End: Complemental strand, 24934016 - 24933828
Alignment:
Q  57 cagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaa 156  Q
    |||||||||||  ||||||| ||||||||| ||||||| ||| | ||  || || ||| ||| |||| ||||  || ||||||||||||||||| |||||    
T  24934016 cagcaacaacatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaa 24933919  T
Q  157 ccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
       |||  ||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24933918 ttttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 24933828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 70 - 252
Target Start/End: Complemental strand, 41455272 - 41455093
Alignment:
Q  70 gattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttatt 169  Q
    ||||||| |||||||||  |||||| ||| ||||  || || ||| ||| |||| ||||  || ||||||||||||||||  |||||   |||   ||||    
T  41455272 gattaagatttcattcttgacattaaatttcaagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaatccctaattttcatcctatt 41455175  T
Q  170 ttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41455174 ttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 41455093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 37 - 245
Target Start/End: Complemental strand, 55499313 - 55499104
Alignment:
Q  37 tttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttca 136  Q
    ||||||||||| |||||||||||||||   | |||||||| |||||||| |||||| | |||||||   ||||| ||||||||||||||| ||||| |||    
T  55499313 tttcaatcaatttatgatcacagcaactgtatagattaagatttcattccgaacatcacattacaacataattaacatgatcattaccca-ttcccctca 55499215  T
Q  137 gaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaatttt-cagaaattatagattat-gattattgagagatagtct 234  Q
    |||||||||||||| |||||||||||||||  |   |||   |||||| ||||||||||||| | ||||||| | |||||  |||| |||||||||||||    
T  55499214 gaatcatcatcaaaccctaaccctcaattttatcctcaaggttaagcagttaggtcaattttcccgaaattacatattatctattaatgagagatagtct 55499115  T
Q  235 cacccttacct 245  Q
    |||||||||||    
T  55499114 cacccttacct 55499104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 252
Target Start/End: Complemental strand, 16801602 - 16801463
Alignment:
Q  112 catgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaattt-attttccaaaactaagcaattaggtcaattttcagaaattatag 210  Q
    |||||||||||| |  ||| | ||| ||||||||||||  ||||||| ||||||| || ||| ||| ||||||||| ||||||||||||||||||||||     
T  16801602 catgatcattacaccattctcctcaaaatcatcatcaac-cctaaccttcaattttatcttcaaaagctaagcaatcaggtcaattttcagaaattatat 16801504  T
Q  211 attatgattattgagagatagtctcacccttaccttagtttt 252  Q
    || |||||||||||||||||||||||||||||||||||||||    
T  16801503 at-atgattattgagagatagtctcacccttaccttagtttt 16801463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 247
Target Start/End: Original strand, 18929239 - 18929300
Alignment:
Q  186 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  18929239 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 17240577 - 17240513
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  17240577 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 13302295 - 13302240
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13302295 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13302240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 13323842 - 13323787
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13323842 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13323787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 12033499 - 12033444
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12033499 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 12033444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 13312951 - 13312896
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||| |||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13312951 aattttcaaaaattacatattatgattattgaaagataatctcacccttaccttag 13312896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 17131732 - 17131787
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  17131732 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 17131787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 51301589 - 51301644
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| | |||||||||||||  ||||| |||||||||||||||||    
T  51301589 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 51301644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 248
Target Start/End: Complemental strand, 10389557 - 10389443
Alignment:
Q  134 tcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 233  Q
    ||||||||||||||||| |||||   |||  ||||| |  |||||||  ||||||| | | ||||||||||||||| ||||| || ||||| ||||| ||    
T  10389557 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10389458  T
Q  234 tcacccttaccttag 248  Q
     ||||||||||||||    
T  10389457 ccacccttaccttag 10389443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 248
Target Start/End: Complemental strand, 10414646 - 10414532
Alignment:
Q  134 tcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 233  Q
    ||||||||||||||||| |||||   |||  ||||| |  |||||||  ||||||| | | ||||||||||||||| ||||| || ||||| ||||| ||    
T  10414646 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10414547  T
Q  234 tcacccttaccttag 248  Q
     ||||||||||||||    
T  10414546 ccacccttaccttag 10414532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 248
Target Start/End: Complemental strand, 10421316 - 10421202
Alignment:
Q  134 tcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 233  Q
    ||||||||||||||||| |||||   |||  ||||| |  |||||||  ||||||| | | ||||||||||||||| ||||| || ||||| ||||| ||    
T  10421316 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10421217  T
Q  234 tcacccttaccttag 248  Q
     ||||||||||||||    
T  10421216 ccacccttaccttag 10421202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 14865846 - 14865901
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  14865846 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 14865901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 248
Target Start/End: Complemental strand, 23392854 - 23392819
Alignment:
Q  213 tatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| ||||||||||||||||||||    
T  23392854 tatgattattgagagttagtctcacccttaccttag 23392819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 16801027 - 16801081
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 245  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||    
T  16801027 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 16801081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 2247685 - 2247649
Alignment:
Q  212 ttatgattattgagagatagtctcacccttaccttag 248  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  2247685 ttataattattgagagttagtctcacccttaccttag 2247649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 988 - 1237
Alignment:
Q  1 tacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  988 tacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaa-gattaagttttcattctgaacattatattac 1086  T
Q  101 aagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttca 200  Q
    ||| |||||| ||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  1087 aagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttca 1185  T
Q  201 gaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1186 ggaattatagattatgattattgagagatagtctcacccttaccttagtttt 1237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 49989 - 50238
Alignment:
Q  1 tacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  49989 tacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaa-gattaagttttcattctgaacattatattac 50087  T
Q  101 aagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttca 200  Q
    ||| |||||| ||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  50088 aagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttca 50186  T
Q  201 gaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50187 ggaattatagattatgattattgagagatagtctcacccttaccttagtttt 50238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 28 - 252
Target Start/End: Original strand, 111717 - 111942
Alignment:
Q  28 attcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccat 127  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  111717 attcatcaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccat 111816  T
Q  128 ttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaa-ttttcagaaattatagattatgattattgaga 226  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  111817 ttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatttttcagaaattatagattatgattattgaga 111916  T
Q  227 gatagtctcacccttaccttagtttt 252  Q
    ||||||||||||||||||||||||||    
T  111917 gatagtctcacccttaccttagtttt 111942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 184; Significance: 1e-99; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 8046078 - 8045828
Alignment:
Q  1 tacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8046078 tacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaaggattaagttttcattctgaacattatattac 8045979  T
Q  101 aagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttca 200  Q
    ||| |||||| ||| ||| |||||||||||||||||||||  || ||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  8045978 aagagaattaacattatctttacccatttcccttcagaattctcgtcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttca 8045880  T
Q  201 gaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8045879 gaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 8045828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 11847916 - 11848173
Alignment:
Q  1 tacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||||||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  11847916 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattat 11848015  T
Q  101 aagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaa------tttattttccaaaactaagcaattaggtcaa 194  Q
    ||  | |||| ||||||||||||||||| | |||||||||| |||||||| ||||||||||||      || ||||| |||||||| || | ||||||||    
T  11848016 aaaaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattgattttaatttttcaaaactatgccactaggtcaa 11848115  T
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11848116 ttttcaggaattatagattatgattattgagagatagtctcacccttaccttagtttt 11848173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 134 - 248
Target Start/End: Original strand, 53483646 - 53483760
Alignment:
Q  134 tcagaatcatcatcaaatcctaaccctca-atttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagt 232  Q
    ||||||||||||||||| |||||   ||| |||  ||||| |||||||  |||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  53483646 tcagaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagt 53483744  T
Q  233 ctcacccttaccttag 248  Q
    ||||||||||||||||    
T  53483745 ctcacccttaccttag 53483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 15408139 - 15408195
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  15408139 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttag 15408195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 8834895 - 8834951
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  8834895 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 8834951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 13888641 - 13888697
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  13888641 tcaattttcagaaattatacattatgatcattgagagttagcctcacccttacctta 13888697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 14486661 - 14486713
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 245  Q
    ||||||||||||||||| |||||||| |||||  |||||||||||||||||||    
T  14486661 aattttcagaaattatatattatgatcattgaaggatagtctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 15245215 - 15245271
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| |||| ||| |||||||| ||| |||||||||||||||    
T  15245215 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttacctta 15245271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 22724742 - 22724691
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcaccctta 242  Q
    |||||||||||||||| || | ||| ||||||||||||||||||||||||||    
T  22724742 tcaattttcagaaattctatactattattattgagagatagtctcaccctta 22724691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 15308120 - 15308176
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| |||| ||| |||||||| ||| |||||||||| ||||    
T  15308120 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttaactta 15308176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 15747592 - 15747552
Alignment:
Q  212 ttatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  15747592 ttataattattgagagttagtctcacccttaccttagtttt 15747552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 16146885 - 16146830
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  16146885 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 16146830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 27906266 - 27906321
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| |||||||| ||||| ||||| || |||||||| |||||    
T  27906266 aattttcagaaattatacattatgatcattgaaagataatcccacccttatcttag 27906321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 247
Target Start/End: Original strand, 15069781 - 15069811
Alignment:
Q  217 attattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||||||||||||||||    
T  15069781 attattgagagatagtctcacccttacctta 15069811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 247
Target Start/End: Original strand, 15076381 - 15076411
Alignment:
Q  217 attattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||||||||||||||||    
T  15076381 attattgagagatagtctcacccttacctta 15076411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 14912081 - 14912138
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||| |||||||||||||    
T  14912081 tcaattttcagaagttatatattacaatcattgagagttagtctaacccttaccttag 14912138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 183; Significance: 5e-99; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 14 - 260
Target Start/End: Original strand, 23057760 - 23058005
Alignment:
Q  14 caattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatca 113  Q
    ||||| ||| ||||| |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  23057760 caattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaaca 23057859  T
Q  114 tgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagatt 213  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||    
T  23057860 tgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcaggaattatagatt 23057959  T
Q  214 atgattattgagagatagtctcacccttaccttagttttagaagaaa 260  Q
    |||||||| |||||||||||||||||||||||||  |||||||||||    
T  23057960 atgattatcgagagatagtctcacccttacctta-atttagaagaaa 23058005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 29614393 - 29614142
Alignment:
Q  1 tacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||  || ||    
T  29614393 tacacaaattcatcaattcatccaatcattcataaatttcaatcaagttatgatcacagcaacaacaaagattaagttttcattctaaacattcaat-ac 29614295  T
Q  101 aagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttatttt-ccaaaactaagcaattaggtcaattttc 199  Q
    ||| |||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||| || |||| |||||||||||||    
T  29614294 aagagaattaacatgatcattacccatttcccttcataatcatcatcaaaccctaaccctcaatttatttttccaaaattatgcaactaggtcaattttc 29614195  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29614194 agaaattatagattatgattattgagagatagtctcacccttaccttagtttt 29614142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 9 - 295
Target Start/End: Original strand, 23839016 - 23839303
Alignment:
Q  9 ttcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||| ||| ||||| |||||| ||||||||||| |||||||||| |||||  | |||||||||||||||||||||||||| |||||||  ||||    
T  23839016 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacagaat 23839114  T
Q  109 tatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaa-actaagcaattaggtcaattttcagaaatta 207  Q
    || |||||||| |||||||| ||||| ||||||||||||||| ||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||    
T  23839115 taacatgatcaatacccattcccctt-agaatcatcatcaaaccctaaccctcaatttatcttccaaacactatgcaattaggtcaattttcagaaatta 23839213  T
Q  208 tagattatgattattgagagatagtctcacccttaccttagttt--tagaagaaacgcacaacgaccggattctctgactctacttgttc 295  Q
    |||||||||||||||||||||||||||||||||||||||| |||    ||| ||| ||||||| | ||||||||||||||| ||||||||    
T  23839214 tagattatgattattgagagatagtctcacccttaccttaatttagatgaacaaaagcacaacaatcggattctctgactccacttgttc 23839303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 35 - 247
Target Start/End: Original strand, 4477700 - 4477912
Alignment:
Q  35 aatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttccctt 134  Q
    ||||||||||||| |||||||||| |||||| | |||||||||||||||||| ||||||| |||||||  |||||| |||||||| |||||||| ||||     
T  4477700 aatttcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaattagcatgatcaatacccattcccct- 4477798  T
Q  135 cagaatcatcatcaaatcctaaccctcaatttattttccaaaa-ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 233  Q
    |||||||||||||||| |||||||| |||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4477799 cagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 4477898  T
Q  234 tcacccttacctta 247  Q
    ||||||||||||||    
T  4477899 tcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 9 - 248
Target Start/End: Complemental strand, 10986418 - 10986180
Alignment:
Q  9 ttcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||| ||| ||||| || ||| ||||||||||| |||||||||| |||||  | |||||||||||||||||||||||||| |||||||  ||||    
T  10986418 ttcatcaattcatccaatcaatcgtaa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacagaat 10986320  T
Q  109 tatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaa-ctaagcaattaggtcaattttcagaaatta 207  Q
    || |||||||| |||||||| |||| |||||||||||||||| ||||||||||||||||| |||||||| ||| ||||||||||||||||| ||||||||    
T  10986319 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaatttttagaaatta 10986221  T
Q  208 tagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  10986220 tagattatgattattgaaagatagtctcacccttaccttag 10986180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 37 - 252
Target Start/End: Original strand, 18800282 - 18800497
Alignment:
Q  37 tttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttca 136  Q
    ||||||||||| | |||||||| |||||| | |||||||| ||||||| ||||||| | |||||||  |||||| |||||||||||| |||| |||| ||    
T  18800282 tttcaatcaatttgtgatcacaacaacaatatagattaagatttcattttgaacatcacattacaacagaattaacatgatcattactcatt-ccctcca 18800380  T
Q  137 gaatcatcatcaaatcctaaccctcaatt-tattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctc 235  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18800381 gaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctc 18800480  T
Q  236 acccttaccttagtttt 252  Q
    |||||||| ||||||||    
T  18800481 acccttacattagtttt 18800497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 113 - 252
Target Start/End: Complemental strand, 930229 - 930091
Alignment:
Q  113 atgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagat 212  Q
    |||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||| ||||||||  |||||||||||||||||||||| |||||||    
T  930229 atgatcattacccatt-cccttcagaaacatcatcaaaccctaaccctcaatttatttttcaaaactatacaattaggtcaattttcagaaactatagat 930131  T
Q  213 tatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  930130 tatgattattgagagatagtctcacccttaccttagtttt 930091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 56 - 252
Target Start/End: Original strand, 12168230 - 12168422
Alignment:
Q  56 acagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatccta 155  Q
    ||||||||||||  ||||||| |||| |||| ||||||| ||| ||||  || || ||| ||| |||| ||||  || ||||||||||||||||| ||||    
T  12168230 acagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaacccta 12168326  T
Q  156 accctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||  |||  ||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12168327 actttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 12168422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 56 - 252
Target Start/End: Original strand, 19287139 - 19287331
Alignment:
Q  56 acagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatccta 155  Q
    ||||||||||||  ||||||| |||| |||| ||||||| ||| ||||  || || ||| ||| |||| ||||  || ||||||||||||||||| ||||    
T  19287139 acagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaacccta 19287235  T
Q  156 accctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||  |||  ||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19287236 actttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 19287331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 56 - 252
Target Start/End: Complemental strand, 19786057 - 19785865
Alignment:
Q  56 acagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatccta 155  Q
    ||||||||||||  ||||||| |||| |||| ||||||| ||| ||||  || || ||| ||| |||| ||||  || ||||||||||||||||| ||||    
T  19786057 acagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaacccta 19785961  T
Q  156 accctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||  ||| |||||||||||||||||  ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19785960 actttcattttattttccaaaactattcaactaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 19785865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 56 - 252
Target Start/End: Original strand, 19878323 - 19878515
Alignment:
Q  56 acagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatccta 155  Q
    ||||||||||||  ||||||| |||| |||| ||||||| ||| ||||  || || ||| ||| |||| ||||  || ||||||||||||||||| ||||    
T  19878323 acagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaacccta 19878419  T
Q  156 accctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||  |||  ||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19878420 actttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 19878515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 56 - 252
Target Start/End: Original strand, 19884099 - 19884291
Alignment:
Q  56 acagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatccta 155  Q
    ||||||||||||  ||||||| |||| |||| ||||||| ||| ||||  || || ||| ||| |||| ||||  || ||||||||||||||||| ||||    
T  19884099 acagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaacccta 19884195  T
Q  156 accctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||  |||  ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19884196 actttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcaccctaaccttagtttt 19884291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 37 - 245
Target Start/End: Complemental strand, 21565422 - 21565214
Alignment:
Q  37 tttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttca 136  Q
    ||||||||||| ||||||||||||||||  | |||||||| |||||||| |||| | | |||||||   ||||| ||||||||||||||||| ||||| |    
T  21565422 tttcaatcaatttatgatcacagcaacagtatagattaagatttcattccgaacgtcacattacaacataattaacatgatcattacccattcccctt-a 21565324  T
Q  137 gaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattat-gattattgagagatagtctc 235  Q
    |||||||||||||| |||||||||||||||  |   |||   ||||||||||||||||||||| ||||||| | |||||  |||| ||||||||||||||    
T  21565323 gaatcatcatcaaaccctaaccctcaattttatcctcaaggttaagcaattaggtcaattttccgaaattaaatattatctattaatgagagatagtctc 21565224  T
Q  236 acccttacct 245  Q
    ||||||||||    
T  21565223 acccttacct 21565214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 34640069 - 34639986
Alignment:
Q  165 ttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34640069 ttattttccaaaactattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34639986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 34646743 - 34646660
Alignment:
Q  165 ttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||| ||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34646743 ttattttccaaaattattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34646660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 134 - 248
Target Start/End: Complemental strand, 25469816 - 25469704
Alignment:
Q  134 tcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 233  Q
    ||||||| ||||||||| |||||   |||  |||||||||||||| |  ||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  25469816 tcagaattatcatcaaaccctaattttcatattattttccaaaaccattcaattaggtcaattt-cagaa-ttatagattatgattattgagagatagtc 25469719  T
Q  234 tcacccttaccttag 248  Q
    |||||||||||||||    
T  25469718 tcacccttaccttag 25469704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 24512899 - 24512843
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||| |||||||    
T  24512899 caattttcagaaattatatactatgattattgagagatagtctcaccctcaccttag 24512843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 9187498 - 9187550
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  9187498 ttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 25348486 - 25348542
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||||    
T  25348486 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 25348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 279
Target Start/End: Original strand, 25397172 - 25397261
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaag--aaacgcacaacgaccggattct 279  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||  || |||||  ||||||||||||| ||||||||    
T  25397172 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta-attcagaagaaaaacgcacaacgatcggattct 25397261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 25598643 - 25598697
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 245  Q
    |||||||||||||| |||| |||||||| |||||||| |||||||||||||||||    
T  25598643 tcaattttcagaaaatatatattatgatcattgagagttagtctcacccttacct 25598697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 31252413 - 31252478
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||| | ||||||||||||||||| ||||| || ||| | ||||| |||||||||||||||||    
T  31252413 caattagattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttag 31252478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 19471391 - 19471335
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  19471391 tcaatttccagaaattatatattatgatcatcgagaggtagcctcacccttacctta 19471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 2286823 - 2286769
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 245  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||    
T  2286823 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 2286769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 248
Target Start/End: Complemental strand, 11288758 - 11288668
Alignment:
Q  159 ctcaatttattttccaaaactaagcaattaggtcaatttt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||||| | |||||  |  |||||| |||||| ||||||||||| |||| ||| ||||| ||||| || ||||||||||||||    
T  11288758 ctcaatttattttcaagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttaccttag 11288668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 247
Target Start/End: Original strand, 18659450 - 18659484
Alignment:
Q  213 tatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||| |||||||||||||||||||    
T  18659450 tatgattattgagagttagtctcacccttacctta 18659484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 247
Target Start/End: Original strand, 24441673 - 24441707
Alignment:
Q  213 tatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||| |||||||||||||||||||    
T  24441673 tatgattattgagagttagtctcacccttacctta 24441707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 15458492 - 15458545
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  15458492 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 15458545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 15465087 - 15465140
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  15465087 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 15465140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 248
Target Start/End: Complemental strand, 28288537 - 28288509
Alignment:
Q  220 attgagagatagtctcacccttaccttag 248  Q
    |||||||||||||||||||||||||||||    
T  28288537 attgagagatagtctcacccttaccttag 28288509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 181; Significance: 8e-98; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 997 - 746
Alignment:
Q  1 tacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||| | |||||||||| ||||||||| ||||||||||| || ||||||||||||||||    
T  997 tacacaaattcatcaattcatccaatcactcataaatttcaatcagtttatgatcacatcaacaacaa-gattaagtttttatcctgaacattatattac 899  T
Q  101 aagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttcc-aaaactaagcaattaggtcaattttc 199  Q
    ||| | |||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  898 aagagtattatcatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttc 799  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  798 agaaattatagattatgattattgagagatagtctcacccttaccttagtttt 746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 155; Significance: 3e-82; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 8 - 245
Target Start/End: Complemental strand, 14635 - 14398
Alignment:
Q  8 attcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaa 107  Q
    ||||||||||| ||| ||||| |||||  ||||||||| | |||||||||||||||| || ||||||||||||||||| |||||| | |||||||  |||    
T  14635 attcatcaatttatccaatcaatcatat-tttcaatcagtttatgatcacagcaacagcatagattaagttttcattcggaacatcacattacaacagaa 14537  T
Q  108 ttatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttcc-aaaactaagcaattaggtcaattttcagaaatt 206  Q
    ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||    
T  14536 ttaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaatt 14437  T
Q  207 atagattatgattattgagagatagtctcacccttacct 245  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14436 atagattatgattattgagagatagtctcacccttacct 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 154; Significance: 1e-81; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 2143 - 1893
Alignment:
Q  1 tacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||||||| ||  ||||| |||| ||||||||||||  |||||||||||||||||||| ||||||||||||||| ||||||||| |||||    
T  2143 tacacaaattcatcaattcatacaatcactcatcaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattatgaacattaaattac 2044  T
Q  101 aagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaa-ttttc 199  Q
    ||| |||||| ||| |||||||||||||  || ||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||||||| |||||    
T  2043 aagagaattaacataatcattacccatt--ccatcaaaatcatcatcaaaccctaaccctcaaattattttccaaaactatacaattaggtcaatttttc 1946  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1945 agaaattatagattatgattattgagatatagtctcacccttaccttagtttt 1893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 8820 - 8570
Alignment:
Q  1 tacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||||||| ||  ||||| | || ||||||||||||  |||||||||||||||||||| ||||||||||||||| ||||||||| |||||    
T  8820 tacacaaattcatcaattcatacaatcacttatcaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattttgaacattaaattac 8721  T
Q  101 aagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaa-ttttc 199  Q
    ||| |||||| ||| |||||||||||||  || ||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||||||| |||||    
T  8720 aagagaattaacataatcattacccatt--ccatcataatcatcatcaaaccctaaccctcaaattattttccaaaactatacaattaggtcaatttttc 8623  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8622 agaaattatagattatgattattgagatatagtctcacccttaccttagtttt 8570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 151; Significance: 7e-80; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 9 - 295
Target Start/End: Complemental strand, 20437261 - 20436974
Alignment:
Q  9 ttcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||| ||| ||||| |||||| ||||||||||| |||||||||| |||||  | |||||||||||||||||||||||||| |||||||   |||    
T  20437261 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacataat 20437163  T
Q  109 tatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaa-ctaagcaattaggtcaattttcagaaatta 207  Q
    || |||||||| |||||||| |||| |||||||||||||||| ||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  20437162 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 20437064  T
Q  208 tagattatgattattgagagatagtctcacccttaccttagttt--tagaagaaacgcacaacgaccggattctctgactctacttgttc 295  Q
    |||||||||||||||||||||||||||||||||||||||| |||    ||| ||| ||||||| | ||||||||||||||| ||||||||    
T  20437063 tagattatgattattgagagatagtctcacccttaccttaatttagatgaacaaaagcacaacaatcggattctctgactccacttgttc 20436974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 134 - 252
Target Start/End: Original strand, 41111977 - 41112094
Alignment:
Q  134 tcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 233  Q
    ||||||||||||||||| ||||||  |||  ||||||| ||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41111977 tcagaatcatcatcaaaccctaactttcatcttatttttcaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtc 41112075  T
Q  234 tcacccttaccttagtttt 252  Q
    |||||||||||||||||||    
T  41112076 tcacccttaccttagtttt 41112094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 183 - 302
Target Start/End: Original strand, 32651563 - 32651682
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaag-aaacgcacaacgaccggattctct 281  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||  |||||||| |||| |||||||| ||||||||||    
T  32651563 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta-atttagaagaaaacacacaacgatcggattctct 32651661  T
Q  282 gactctacttgttcatctcac 302  Q
    ||||| |||||||| ||||||    
T  32651662 gactccacttgttcttctcac 32651682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 18712790 - 18712854
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||    
T  18712790 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 19663572 - 19663517
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  19663572 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 20805320 - 20805376
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  20805320 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 20805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 11158093 - 11158148
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||    
T  11158093 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 11158148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 10811839 - 10811785
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 245  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||    
T  10811839 tcaattttcagaaattctacactattattattgagagatagtctcacccttacct 10811785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 20851187 - 20851132
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20851187 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20851132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 20857814 - 20857759
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20857814 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20857759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 21706276 - 21706331
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  21706276 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21706331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 21710818 - 21710873
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  21710818 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21710873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 247
Target Start/End: Original strand, 24476350 - 24476380
Alignment:
Q  217 attattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||||||||||||||||    
T  24476350 attattgagagatagtctcacccttacctta 24476380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 247
Target Start/End: Complemental strand, 25091448 - 25091418
Alignment:
Q  217 attattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||||||||||||||||    
T  25091448 attattgagagatagtctcacccttacctta 25091418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 246
Target Start/End: Original strand, 18271338 - 18271371
Alignment:
Q  213 tatgattattgagagatagtctcacccttacctt 246  Q
    ||||||||||||||| ||||||||||||||||||    
T  18271338 tatgattattgagagttagtctcacccttacctt 18271371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 246
Target Start/End: Original strand, 18275992 - 18276025
Alignment:
Q  213 tatgattattgagagatagtctcacccttacctt 246  Q
    ||||||||||||||| ||||||||||||||||||    
T  18275992 tatgattattgagagttagtctcacccttacctt 18276025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 148; Significance: 4e-78; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 9 - 248
Target Start/End: Original strand, 44477441 - 44477678
Alignment:
Q  9 ttcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||| ||| ||||| |||||| ||||||||||| |||||||||| |||||  | |||||||||||||||||| |||||||  ||||||  ||||    
T  44477441 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 44477539  T
Q  109 tatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 208  Q
    || |||||||| |||||||| |||| || ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44477540 taacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 44477638  T
Q  209 agattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  44477639 agattatgattattgagagatagtctcacccttaccttag 44477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 9 - 248
Target Start/End: Original strand, 44492599 - 44492836
Alignment:
Q  9 ttcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||| ||| ||||| |||||| ||||||||||| |||||||||| |||||  | |||||||||||||||||| |||||||  ||||||  ||||    
T  44492599 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 44492697  T
Q  109 tatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 208  Q
    || |||||||| |||||||| |||| || ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44492698 taacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 44492796  T
Q  209 agattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  44492797 agattatgattattgagagatagtctcacccttaccttag 44492836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 23866423 - 23866674
Alignment:
Q  1 tacacaaattcatcaattgatctaatcattcataaatttcaa-tcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatatta 99  Q
    |||||||||||||||||| ||| ||||| ||||||||| ||| ||| | || ||||| ||||||||||| ||||||||||  ||||||||||||||||||    
T  23866423 tacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcagagcaacaacaa-gattaagtttatattctgaacattatatta 23866521  T
Q  100 caagg-gaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaatttt 198  Q
    |||   |||||| ||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||    
T  23866522 caaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-ttt 23866620  T
Q  199 cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23866621 caggaattataaattatgattattgagagatagtctcacccttaccttagtttt 23866674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 8727979 - 8727735
Alignment:
Q  1 tacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||||||| ||| ||||| |||||| ||||||||||| |||||||||| |||||  | |||||||||||||||||||||||||| |||||    
T  8727979 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattac 8727880  T
Q  101 aagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttcc-aaaactaagcaattaggtcaattttc 199  Q
    ||  |||||| |||||||| |||||| | ||| ||||||||||| ||||| ||||||||||||||||| |||| ||||||| ||||||||||||||||||    
T  8727879 aacagaattaacatgatcaataccca-tacccctcagaatcatcgtcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttc 8727781  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttacct 245  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||    
T  8727780 agaaattatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 56 - 252
Target Start/End: Original strand, 17054458 - 17054650
Alignment:
Q  56 acagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatccta 155  Q
    ||||||||||||  ||||||| |||| |||| ||||||| ||| ||||  || || ||| ||| |||| ||||  || ||||||||||||||||| ||||    
T  17054458 acagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaacccta 17054554  T
Q  156 accctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||  |||  ||||||||||||||||  ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17054555 actttcatcttattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttggtttt 17054650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 18614271 - 18614382
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaag-aaacgcacaacgaccggattctctgactctac 289  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||  |||||||| |||||||||| || ||||||||||||||||||    
T  18614271 tcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta-atttagaagaaaacgcacaatgatcggattctctgactctac 18614369  T
Q  290 ttgttcatctcac 302  Q
    |||||| ||||||    
T  18614370 ttgttcttctcac 18614382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 27941091 - 27940946
Alignment:
Q  9 ttcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||| ||| ||||| |||||| ||||||||||| |||||||| | |||||  | ||||||| |||||||||||||||||| |||||||  ||||    
T  27941091 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcataacaacagtatagattaaattttcattctgaacattacattacaacagaat 27940993  T
Q  109 tatcatgatcattacccatttcccttcagaatcatcatcaaatcctaa 156  Q
    || |||||||| |||||| ||||| ||||||||||||||||| |||||    
T  27940992 taacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaa 27940946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 183 - 295
Target Start/End: Complemental strand, 23482117 - 23482003
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt--tagaagaaacgcacaacgaccggattctc 280  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||    ||| ||| ||||||| | |||||||||    
T  23482117 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttaccttaatttagatgaacaaaagcacaacaatcggattctc 23482018  T
Q  281 tgactctacttgttc 295  Q
    |||||| | ||||||    
T  23482017 tgactccagttgttc 23482003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 39364919 - 39364975
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||||    
T  39364919 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 39364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 260
Target Start/End: Complemental strand, 29643440 - 29643374
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaagaaa 260  Q
    ||||||||||||||| | |||||||||||||| ||||| ||||||||||||||||  |||||||||||    
T  29643440 aattttcagaaattacatattatgattattgaaagataatctcacccttacctta-atttagaagaaa 29643374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 14056619 - 14056563
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||| ||| | | ||| ||||||||||||||||||||||||||||||||    
T  14056619 caattttcagaatttacatactattattattgagagatagtctcacccttaccttag 14056563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 25111976 - 25112032
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||| ||| | | ||| ||||||||||||||||||||||||||||||||    
T  25111976 caattttcagaatttacatactattattattgagagatagtctcacccttaccttag 25112032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 24320725 - 24320670
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  24320725 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 24320670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 21931696 - 21931752
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| |||||||||||||||    
T  21931696 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 21931752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 27940907 - 27940847
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |||||||||||||| ||| ||||| || |||||  | ||| ||||||||||||||||||||    
T  27940907 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagtttt 27940847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 148; Significance: 4e-78; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 9 - 260
Target Start/End: Complemental strand, 19661690 - 19661442
Alignment:
Q  9 ttcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||| ||| ||||| |||||| ||||||||||| |||||||||| |||||| | |||||||||||||||||| ||||||| |||||||  ||||    
T  19661690 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaat 19661592  T
Q  109 tatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 208  Q
    || |||||||| |||||||| |||| |||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  19661591 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 19661493  T
Q  209 agattatgattattgagagatagtctcacccttaccttagttttagaagaaa 260  Q
    ||||||||||||| |||||| ||||||||||||||||||  |||||||||||    
T  19661492 agattatgattatcgagagaaagtctcacccttacctta-atttagaagaaa 19661442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 9 - 247
Target Start/End: Original strand, 6483536 - 6483772
Alignment:
Q  9 ttcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||| |||  |||| |||||| ||||||||||| |||||||||| |||||  | |||||||||||||||||| |||||||  ||||||  ||||    
T  6483536 ttcatcaattcatcccatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 6483634  T
Q  109 tatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 208  Q
    || |||||||| |||||||| |||| || ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6483635 taacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 6483733  T
Q  209 agattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6483734 agattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 9 - 247
Target Start/End: Original strand, 6487003 - 6487239
Alignment:
Q  9 ttcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||| |||  |||| |||||| ||||||||||| |||||||||| |||||  | |||||||||||||||||| |||||||  ||||||  ||||    
T  6487003 ttcatcaattcatcccatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 6487101  T
Q  109 tatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 208  Q
    || |||||||| |||||||| |||| || ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6487102 taacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 6487200  T
Q  209 agattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6487201 agattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 51 - 252
Target Start/End: Original strand, 26583687 - 26583886
Alignment:
Q  51 tgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaa 150  Q
    ||||||||||||||  | |||||| |  |||||||||||||| |  ||||||   | ||| |||||||||||||| |||||| ||||||||||||||||     
T  26583687 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattaccc-tttcccctcagaatcatcatcaag 26583785  T
Q  151 tcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtt 250  Q
     ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26583786 ccctaaccctcaatttattttccaaaactatgcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagtt 26583884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 37 - 245
Target Start/End: Complemental strand, 23089265 - 23089057
Alignment:
Q  37 tttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttca 136  Q
    ||||||||||| ||||||||||||||||  | |||||||| |||||||| |||| | | |||||||   ||||| ||||||||||||||||| ||||| |    
T  23089265 tttcaatcaatttatgatcacagcaacagtatagattaagatttcattccgaacgtcacattacaacataattaacatgatcattacccattcccctt-a 23089167  T
Q  137 gaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattat-gattattgagagatagtctc 235  Q
    |||||||||||||| |||||||||||||||  |   |||   ||||||||||||||||||||| ||||||| | |||||  |||| ||||||||||||||    
T  23089166 gaatcatcatcaaaccctaaccctcaattttatcctcaaggttaagcaattaggtcaattttccgaaattaaatattatctattaatgagagatagtctc 23089067  T
Q  236 acccttacct 245  Q
    ||||||||||    
T  23089066 acccttacct 23089057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 37 - 245
Target Start/End: Original strand, 23878853 - 23879060
Alignment:
Q  37 tttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttca 136  Q
    ||||||||||| |||||||||| |||||  | |||||||| ||||||||||||||| | |||||||   ||||| ||||||||||||||  ||||| |||    
T  23878853 tttcaatcaatttatgatcacaacaacagtatagattaagatttcattctgaacatcacattacaacataattaacatgatcattaccccattcccctca 23878952  T
Q  137 gaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 236  Q
    ||||||||| | || |||||||||||||||| |   |||   ||||||||||||||||||||  ||||||||| || || |||| |||||||||||||||    
T  23878953 gaatcatcaac-aaccctaaccctcaatttaatcctcaaggttaagcaattaggtcaatttttcgaaattatatataattattaatgagagatagtctca 23879051  T
Q  237 cccttacct 245  Q
    |||||||||    
T  23879052 cccttacct 23879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 37 - 247
Target Start/End: Complemental strand, 23101673 - 23101463
Alignment:
Q  37 tttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttca 136  Q
    ||||||||||| |||||||||| |||||  | |||||||| |||||||| |||| | | |||||||   ||||| ||||||||||||||| ||||| |||    
T  23101673 tttcaatcaatttatgatcacaacaacagtatagattaagatttcattccgaacgtcacattacaacataattaacatgatcattaccca-ttcccctca 23101575  T
Q  137 gaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattat-gattattgagagatagtctc 235  Q
    |||||||||||||| |||||||||||||||  |   |||   ||| ||||||||||||||||| ||||||| | |||||  |||| ||||||||||||||    
T  23101574 gaatcatcatcaaaccctaaccctcaattttatcctcaaggttaaacaattaggtcaattttccgaaattacatattatctattaatgagagatagtctc 23101475  T
Q  236 acccttacctta 247  Q
    ||||||||||||    
T  23101474 acccttacctta 23101463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 134 - 248
Target Start/End: Complemental strand, 5706137 - 5706023
Alignment:
Q  134 tcagaatcatcatcaaatcctaaccctca-atttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagt 232  Q
    ||||||||||||||||| |||||   ||| |||  ||||| |||||||  |||||||||||| |||||| |||||||||||||||||| |||||||||||    
T  5706137 tcagaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattaatgagagatagt 5706039  T
Q  233 ctcacccttaccttag 248  Q
    ||||||||||||||||    
T  5706038 ctcacccttaccttag 5706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 23265133 - 23265197
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23265133 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 23280201 - 23280265
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23280201 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 247
Target Start/End: Original strand, 21908353 - 21908414
Alignment:
Q  186 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  21908353 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 24661576 - 24661632
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  24661576 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 24661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 10577 - 10632
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  10577 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 10632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 25180984 - 25180929
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  25180984 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 25180929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 26885183 - 26885237
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| |||| ||||||||| ||||| || ||||||||||||||    
T  26885183 aattttcagaaattatacatta-gattattgaaagataatcccacccttaccttag 26885237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 23168351 - 23168298
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| |||||||| | ||| ||||| || ||||||||||||||    
T  23168351 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttag 23168298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 23579608 - 23579555
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| |||||||| | ||| ||||| || ||||||||||||||    
T  23579608 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttag 23579555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 9 - 248
Target Start/End: Complemental strand, 10433 - 10195
Alignment:
Q  9 ttcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||| ||| ||||| |||||| ||||||||||| |||||||||| |||||  | |||||||||||||||||| ||||||| |||||||  ||||    
T  10433 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 10335  T
Q  109 tatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaa-ctaagcaattaggtcaattttcagaaatta 207  Q
    || |||||||| |||||||| |||| |||||||||||||||| |||||||| |||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  10334 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 10236  T
Q  208 tagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  10235 tagattatgattattgagagatagtcccacccttaccttag 10195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 9 - 248
Target Start/End: Complemental strand, 1763 - 1525
Alignment:
Q  9 ttcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||| ||| ||||| |||||| ||||||||||| |||||||||| |||||  | |||||||||||||||||| ||||||| |||||||  ||||    
T  1763 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 1665  T
Q  109 tatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaa-ctaagcaattaggtcaattttcagaaatta 207  Q
    || |||||||| |||||||| |||| |||||||||||||||| |||||||| |||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  1664 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 1566  T
Q  208 tagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  1565 tagattatgattattgagagatagtcccacccttaccttag 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 37 - 252
Target Start/End: Original strand, 11186 - 11401
Alignment:
Q  37 tttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttca 136  Q
    ||||||||||| | ||||||||||||||  |  ||||||| ||||||| ||||||| | |||||||  |||||| |||||||||||| |||| |||| ||    
T  11186 tttcaatcaatttgtgatcacagcaacagtatggattaagatttcattttgaacatcacattacaacagaattaacatgatcattactcatt-ccctcca 11284  T
Q  137 gaatcatcatcaaatcctaaccctcaatt-tattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctc 235  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11285 gaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctc 11384  T
Q  236 acccttaccttagtttt 252  Q
    |||||||||||||||||    
T  11385 acccttaccttagtttt 11401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 109 - 350
Alignment:
Q  8 attcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaa 107  Q
    ||||||||||| ||| || || |||||| |||||| |||| |||||||||| ||| |||| ||||||||| |||| ||||||||  ||| ||||||  ||    
T  109 attcatcaatttatccaaccaatcataa-tttcaaccaatttatgatcacatcaataacatagattaagtcttcaatctgaacaccataatacaagaaaa 207  T
Q  108 ttatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaatta 207  Q
    ||| ||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  208 ttaacatgatcattacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcagaaatta 305  T
Q  208 tagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  306 tagattatggttattgagagatagtctcacccttaccttagtttt 350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 17985 - 18229
Alignment:
Q  8 attcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagg-ga 106  Q
    ||||||||||| ||| ||||| ||  ||||||||||||||  |||||||||||||||||| || |||||||||||||||| |||| | |||||||   ||    
T  17985 attcatcaatttatccaatcaatcc-aaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 18083  T
Q  107 attatcatgatcattacccatttcccttcagaatcatcatcaaatcctaaccctcaatttattttccaaaa-ctaagcaattaggtcaattttcagaaat 205  Q
    |||| ||||| ||||||| ||||||| | ||||||||||| ||| | |||||||||||||||||||| ||| ||||||||||||||||||||||| ||||    
T  18084 attaacatgaccattacc-atttcccgttagaatcatcattaaaccttaaccctcaatttattttcctaaagctaagcaattaggtcaattttcaaaaat 18182  T
Q  206 tatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  18183 tatagattatgattattgagagatagtctcacccttaccttagtttt 18229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 116; Significance: 5e-59; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 165 - 300
Target Start/End: Original strand, 8049 - 8184
Alignment:
Q  165 ttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaagaaacgca 264  Q
    |||| |||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8049 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagttttagaagaaacgca 8148  T
Q  265 caacgaccggattctctgactctacttgttcatctc 300  Q
    ||||||||||||||||||||||||||||||| ||||    
T  8149 caacgaccggattctctgactctacttgttcttctc 8184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 165 - 300
Target Start/End: Original strand, 904 - 1039
Alignment:
Q  165 ttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaagaaacgca 264  Q
    |||| |||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  904 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagttttagaagaaacgca 1003  T
Q  265 caacgaccggattctctgactctacttgttcatctc 300  Q
    ||||||||||||||||||||| ||||||||| ||||    
T  1004 caacgaccggattctctgactatacttgttcttctc 1039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 806 - 899
Alignment:
Q  8 attcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaa 102  Q
    ||||||||||| ||| ||||  |||||| || |||||||| ||||||||||||||||||| |||||||||||||||||||||||| | |||||||    
T  806 attcatcaatttatccaatccctcataa-ttccaatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaa 899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 7951 - 8044
Alignment:
Q  8 attcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaa 102  Q
    ||||||||||| ||| ||||  |||||| || |||||||| ||||||||||||||||||| |||||||||||||||||||||||| | |||||||    
T  7951 attcatcaatttatccaatccctcataa-ttccaatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaa 8044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 30792 - 30917
Alignment:
Q  128 ttcccttcagaatcatcatcaaatcctaaccctcaattt-attttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgaga 226  Q
    ||||| ||| ||||||||||||| ||||| ||||||||| |  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  30792 ttcccctcaaaatcatcatcaaaccctaatcctcaattttaccttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgaga 30891  T
Q  227 gatagtctcacccttaccttagtttt 252  Q
    ||||||||||||||||||||||||||    
T  30892 gatagtctcacccttaccttagtttt 30917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 37 - 245
Target Start/End: Complemental strand, 3504 - 3295
Alignment:
Q  37 tttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatga-tcattacccatttcccttc 135  Q
    ||||||||||| | ||||||||||||||  | |||||||| ||||||||||||||| | |||||||   ||||| ||||| |||||||||| ||||| ||    
T  3504 tttcaatcaatttgtgatcacagcaacagtatagattaagatttcattctgaacatcacattacaacaaaattaacatgattcattaccca-ttcccctc 3406  T
Q  136 agaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattat-gattattgagagatagtct 234  Q
    ||||||||||||||| |||||||||||||||  |  ||||   ||||||||||||||||||||| ||||||| | |||||  |||| |||||||||||||    
T  3405 agaatcatcatcaaaccctaaccctcaattttatccccaaggttaagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtct 3306  T
Q  235 cacccttacct 245  Q
    |||||||||||    
T  3305 cacccttacct 3295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 57 - 252
Target Start/End: Complemental strand, 1920 - 1728
Alignment:
Q  57 cagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaa 156  Q
    |||||||| ||  ||||||| ||||||||| ||||||| ||| | ||  || || ||| ||| |||| ||||  || ||||||||||||||||| |||||    
T  1920 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaa 1823  T
Q  157 ccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |  |||  ||||||||||||||||  ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1822 ctttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagtttt 1728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 57 - 252
Target Start/End: Complemental strand, 5943 - 5751
Alignment:
Q  57 cagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttcagaatcatcatcaaatcctaa 156  Q
    |||||||| ||  ||||||| ||||||||| ||||||| ||| | ||  || || ||| ||| |||| ||||  || ||||||||||||||||| |||||    
T  5943 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaa 5846  T
Q  157 ccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |  |||  ||||||||||||||||  ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5845 ctttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagtttt 5751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 37 - 245
Target Start/End: Complemental strand, 3832 - 3624
Alignment:
Q  37 tttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagggaattatcatgatcattacccatttcccttca 136  Q
    ||||||||||| |||||||||| |||||  | |||||||| |||||||| |||||| | |||||||   ||||| ||||||||||||||| | ||| |||    
T  3832 tttcaatcaatttatgatcacaacaacagtatagattaagatttcattccgaacatcacattacaacataattaacatgatcattaccca-tccccctca 3734  T
Q  137 gaatcatcatcaaatcctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattat-gattattgagagatagtctc 235  Q
    |||||||||||||| |||||||||||||||  |   |||   ||||||||||||||||||||| ||||||| | |||||  |||| ||||||||||||||    
T  3733 gaatcatcatcaaaccctaaccctcaattttatcctcaaggttaagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctc 3634  T
Q  236 acccttacct 245  Q
    ||||||||||    
T  3633 acccttacct 3624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 183 - 294
Target Start/End: Original strand, 116887 - 116998
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaag-aaacgcacaacgaccggattctct 281  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||  |||||||| |||| |||||||| ||||||||||    
T  116887 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta-atttagaagaaaacacacaacgatcggattctct 116985  T
Q  282 gactctacttgtt 294  Q
    ||||| |||||||    
T  116986 gactccacttgtt 116998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 246
Target Start/End: Original strand, 60441 - 60474
Alignment:
Q  213 tatgattattgagagatagtctcacccttacctt 246  Q
    ||||||||||||||| ||||||||||||||||||    
T  60441 tatgattattgagagttagtctcacccttacctt 60474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 3471 - 3558
Alignment:
Q  1 tacacaaattcatcaattgatctaatcattcataaatttcaatcaatgtatgatcacagcaacaacaaagattaagttttcattctga 88  Q
    |||||||||||||||||| ||| |||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3471 tacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctga 3558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 45386 - 45274
Alignment:
Q  136 agaatcatcatcaaatcctaaccctca-atttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtct 234  Q
    ||||||||||||||| |||||   ||| |||  ||||| |||||||  |||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  45386 agaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtct 45288  T
Q  235 cacccttaccttag 248  Q
    ||||||||||||||    
T  45287 cacccttaccttag 45274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 16811 - 16875
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  16811 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 72 - 8
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  72 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 17643 - 17699
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  17643 caattttcagaaattatacattatggttattgagagatagtctcacccttaccttag 17699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 13623 - 13687
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  13623 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 40587 - 40531
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  40587 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttag 40531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 101992 - 101928
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  101992 caattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 135473 - 135529
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  135473 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttag 135529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 300
Target Start/End: Complemental strand, 15052 - 14944
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaag-aaacgcacaacgaccggattctc-tgactctac 289  Q
    |||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||   ||||||| ||||||||||||| ||||||| | || ||||||    
T  15052 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta--attagaagaaaacgcacaacgatcggattcccttggctctac 14955  T
Q  290 ttgttcatctc 300  Q
    |||||| ||||    
T  14954 ttgttcttctc 14944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 22646 - 22594
Alignment:
Q  194 attttcagaaattatagattatgattattgagagatagtctcacccttacctt 246  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttacctt 22594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 34331 - 34276
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  34331 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 35495 - 35438
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||| |||||||||||||    
T  35495 tcaattttcagaagttatacattacaatcattgagagttagtcttacccttaccttag 35438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 12296 - 12352
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  12296 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 12352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 1378 - 1441
Alignment:
Q  184 aattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||| |||||||||| |||||||| || ||||| ||||| ||||||||||||||||||||||    
T  1378 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 1441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 1453 - 1509
Alignment:
Q  196 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |||||||||||||| |||| ||| |||||||| ||||||||||||||||||| ||||    
T  1453 tttcagaaattatacattaagatcattgagagttagtctcacccttaccttaatttt 1509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 39563 - 39503
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt 251  Q
    ||||||||| ||||||||| |||||||| |||||||| ||| |||||||||||||| ||||    
T  39563 tcaattttctgaaattatatattatgatcattgagagttagcctcacccttacctttgttt 39503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 9336 - 9391
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  9336 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 9391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 10239 - 10294
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| | |||||||||||||  ||||| |||||||||||||||||    
T  10239 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 10294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 300
Target Start/End: Original strand, 69749 - 69855
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaag-aaacgcacaacgaccggattctc-tgactctacttg 292  Q
    |||||| |||||||| |||| ||| ||||| || |||||||||||||||||||  |||||||| |||||| |||||| || |||||| || |||||||||    
T  69749 ttttcataaattatatattaagatcattgaaagttagtctcacccttacctta-atttagaagaaaacgcgcaacgatcgaattctcttggctctacttg 69847  T
Q  293 ttcatctc 300  Q
    ||| ||||    
T  69848 ttcttctc 69855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 135438 - 135493
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||| ||||||||||    
T  135438 aattttcagaaattatatattatgactattgaaagataatctcacgcttaccttag 135493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 493082 - 493028
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| |||| ||||||||| ||||| |||||||||||||||||    
T  493082 aattttcagaaattatacatta-gattattgaaagataatctcacccttaccttag 493028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 680 - 774
Alignment:
Q  159 ctcaatttattttccaaaactaagcaattaggtcaatttt-cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |||||||||||||| | |||||  |  |||||| |||||| ||||||||||| |||| ||| ||||| ||||| || ||||||||||||||||||    
T  680 ctcaatttattttcaagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagtttt 774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 1967 - 1913
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  1967 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 1913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 302
Target Start/End: Original strand, 6540 - 6609
Alignment:
Q  233 ctcacccttaccttagttttagaagaaa-cgcacaacgaccggattctctgactctacttgttcatctcac 302  Q
    ||||||||||||||| ||| |||||||| |||||||||| || |||||||| |||||||||||| ||||||    
T  6540 ctcacccttaccttaattt-agaagaaaacgcacaacgatcgaattctctggctctacttgttcttctcac 6609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 5922 - 5857
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||| | ||||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  5922 caattagattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttag 5857  T

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Target: scaffold0335 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 2684 - 2628
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| |||||||||||||||    
T  2684 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 2628  T

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Target: scaffold0261 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 23624 - 23569
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| |||||||| ||| | ||||| || ||||||||||||||    
T  23624 aattttcagaaattatacattatgatcattcaaagataatcccacccttaccttag 23569  T

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Target: scaffold0053 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 79545 - 79490
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  79545 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 79490  T

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Target: scaffold0053; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 281
Target Start/End: Complemental strand, 79125 - 79057
Alignment:
Q  214 atgattattgagagatagtctcacccttaccttagttttagaag--aaacgcacaacgaccggattctct 281  Q
    ||||| |||||||| ||| |||||||||||||||  ||||||||  ||||||||||||| ||||||||||    
T  79125 atgatcattgagagttagcctcacccttacctta-atttagaagaaaaacgcacaacgatcggattctct 79057  T

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Target: scaffold0790 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 5480 - 5513
Alignment:
Q  219 tattgagagatagtctcacccttaccttagtttt 252  Q
    |||||| |||||||||||||||||||||||||||    
T  5480 tattgaaagatagtctcacccttaccttagtttt 5513  T

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Target: scaffold0481 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 721 - 676
Alignment:
Q  201 gaaattatagattatgattattgagagatagtctcacccttacctt 246  Q
    ||||||||| |||| ||| |||||||| ||||||||||||||||||    
T  721 gaaattatacattaagatcattgagagttagtctcacccttacctt 676  T

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Target: scaffold0249 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 13947 - 13894
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  13947 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 13894  T

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Target: scaffold0600 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 732 - 788
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| ||||||| |||||||    
T  732 tcaattttcagaagttatatattataatcattgagagttagcctcacccctacctta 788  T

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Target: scaffold0180 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 11630 - 11681
Alignment:
Q  198 tcagaaattataga--ttatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||| |  |||| ||||||||||| |||||||||||||||||||    
T  11630 tcagaaattatataatttataattattgagagttagtctcacccttacctta 11681  T

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Target: scaffold0034 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 73285 - 73337
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 245  Q
    |||||||| |||||||| |||||||| ||||| ||||| || |||||||||||    
T  73285 aattttcataaattatacattatgatcattgaaagataatcccacccttacct 73337  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 121902 - 121958
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||  ||||| ||||| || |||||||| ||| |||||||||||||||    
T  121902 tcaattttcagattttatatattataatcattgagagttagcctcacccttacctta 121958  T

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Target: scaffold0031; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 132778 - 132834
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||  ||||| ||||| || |||||||| ||| |||||||||||||||    
T  132778 tcaattttcagattttatatattataatcattgagagttagcctcacccttacctta 132834  T

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