View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17523_low_13 (Length: 397)
Name: NF17523_low_13
Description: NF17523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17523_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 348; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 10 - 381
Target Start/End: Original strand, 31607261 - 31607632
Alignment:
| Q |
10 |
ataattctgaaaacttctttctaagcttacatgtccacaagtaatgacattatttttacctatgtatgtgaccaggattggtggatccttgggcagcaat |
109 |
Q |
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| T |
31607261 |
ataattctgaaaacttctttctaagcttacatgtccacaagtaatgacattatttttacctatgtatgtgacaaggattggtggatccatgggcagcaat |
31607360 |
T |
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| Q |
110 |
attgatgggagctttgtccggctcaattccatggtacacgatgatggtgttgcacaaaagatcgtcattctttcaaagtgtagatgatacattaggagtc |
209 |
Q |
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| T |
31607361 |
attgatgggagctttgtccggttcaattccatggtacacgatgatggtgttgcacaaaaaatcaccattctttcaaagtgtagatgatacattaggagtc |
31607460 |
T |
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| Q |
210 |
tttcacactcatgctgtggctggtattcttgggggaatcctttctggtgtgtttgccaaacctaaacttttgaggattctctatggtccttatgggtctg |
309 |
Q |
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| T |
31607461 |
tttcacactcatgctgtggctggtattcttgggggaatcctttctggtgtgtttgccaaacctaaacttttgaggattctctatggtccttatgggtctg |
31607560 |
T |
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| Q |
310 |
gcttattgtatagttattttgatgataatataggtcaaggaatcaagcaaatgtggtaccaattattaggag |
381 |
Q |
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| T |
31607561 |
gcttattgtatagttattttgatgataatataggtcaaggaatcaagcaaatgtggtaccaattattaggag |
31607632 |
T |
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