View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17523_low_27 (Length: 297)
Name: NF17523_low_27
Description: NF17523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17523_low_27 |
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Alignment Details
Target: chr4 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 14050227 - 14050108
Alignment:
| Q |
15 |
agaaaaaacacaaatatccacatagctaattcgtgaataaattacctagttgtttttcttccaaatgtcatttatcacaagaaagaatgacggtaataga |
114 |
Q |
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| T |
14050227 |
agaaaaaacacaaatatccacatagctaattcgtgaataaattacccagttgtttttcttccaaatgtcatttatcacaagaaagaatgacagtaagaga |
14050128 |
T |
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| Q |
115 |
tcaaataaatgtagcaccac |
134 |
Q |
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| T |
14050127 |
tcaaataaatgtagcaccac |
14050108 |
T |
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