View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17523_low_45 (Length: 214)
Name: NF17523_low_45
Description: NF17523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17523_low_45 |
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Alignment Details
Target: chr7 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 17 - 192
Target Start/End: Complemental strand, 5938959 - 5938784
Alignment:
| Q |
17 |
aagaagaaagagggaatgacaagagatgtggggactcaaagcacacctccttatcttagttcaagcagtcctagccctacttcaactccatccatcatag |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5938959 |
aagaagaaagagggaatgacaagagatgtggggactcaaagcacacctccttatcttagttcaagcagtcctagccctacttcaactccatccatcatag |
5938860 |
T |
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| Q |
117 |
agaggttaaaaactagagctgtagactcacctagttcaaattcaaatgcaaaagcaaaatctgaggaagaggtatg |
192 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
5938859 |
agaggttaaaaactagagctgtagactcacctagttcaaattcaaatgcaaaaacaaaatctgaggaagaggtatg |
5938784 |
T |
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