View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17524_high_3 (Length: 262)
Name: NF17524_high_3
Description: NF17524
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17524_high_3 |
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Alignment Details
Target: chr1 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 25 - 253
Target Start/End: Complemental strand, 32653266 - 32653038
Alignment:
| Q |
25 |
ggttgcggtggcaacaatatcacaaaactcaaatggatcggcaagcacagactcggcaacaaacccaagaatatgagtcatatccatcatnnnnnnngca |
124 |
Q |
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| T |
32653266 |
ggttgcggtggcaacaatatcacaaaactcaaatggatcggcaagcacagactcggcaacaaacccaagaatatgagtcatatccatcataaaaaaagca |
32653167 |
T |
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| Q |
125 |
cctacttcatctgctatctttccttgcataaaagatgcaattagtttatcgcaaggaataaaatcacattgtatatagaagcagatgatgaagattaaaa |
224 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
32653166 |
cctacttcatctgctatctttccttgcataaaagatgcaattagtttatcgcaaggaataaaatcacattgtatacagaagcagatgatgaagattaaaa |
32653067 |
T |
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| Q |
225 |
taaacatacttttctaatgcgagaataat |
253 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
32653066 |
taaacatacttttctaatgcgagaataat |
32653038 |
T |
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