View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17528_low_1 (Length: 652)

Name: NF17528_low_1
Description: NF17528
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17528_low_1
NF17528_low_1
[»] chr1 (29 HSPs)
chr1 (39-346)||(18787417-18787716)
chr1 (369-635)||(18787987-18788251)
chr1 (369-433)||(13523036-13523100)
chr1 (369-433)||(22789666-22789730)
chr1 (369-433)||(38531245-38531309)
chr1 (371-433)||(16913654-16913716)
chr1 (371-433)||(19081728-19081790)
chr1 (371-433)||(19129616-19129678)
chr1 (369-433)||(9259258-9259322)
chr1 (369-433)||(9464103-9464167)
chr1 (369-433)||(12161814-12161878)
chr1 (369-433)||(14486707-14486771)
chr1 (369-433)||(15243085-15243149)
chr1 (369-433)||(22158802-22158866)
chr1 (369-433)||(22603548-22603612)
chr1 (369-433)||(23457897-23457961)
chr1 (369-433)||(41071910-41071974)
chr1 (369-433)||(52183678-52183742)
chr1 (372-433)||(29549418-29549479)
chr1 (369-433)||(6459217-6459281)
chr1 (369-433)||(9110050-9110114)
chr1 (369-433)||(12720809-12720873)
chr1 (369-433)||(12989852-12989916)
chr1 (369-433)||(14760867-14760931)
chr1 (369-433)||(20408235-20408299)
chr1 (369-433)||(20580909-20580973)
chr1 (369-433)||(29093629-29093693)
chr1 (369-433)||(41752433-41752497)
chr1 (369-433)||(45839292-45839356)
[»] chr7 (22 HSPs)
chr7 (369-433)||(22501594-22501658)
chr7 (369-433)||(22486394-22486458)
chr7 (369-433)||(816266-816330)
chr7 (369-433)||(31042251-31042315)
chr7 (369-433)||(39979699-39979763)
chr7 (369-433)||(10050911-10050975)
chr7 (369-433)||(11036507-11036571)
chr7 (369-433)||(20174020-20174084)
chr7 (369-433)||(23577264-23577328)
chr7 (369-433)||(24605838-24605902)
chr7 (369-433)||(31425586-31425650)
chr7 (369-433)||(40847510-40847574)
chr7 (386-429)||(25777204-25777247)
chr7 (371-433)||(20429465-20429527)
chr7 (371-433)||(37135362-37135424)
chr7 (369-430)||(32267350-32267411)
chr7 (369-433)||(10222704-10222768)
chr7 (369-433)||(15014480-15014544)
chr7 (369-433)||(21917409-21917473)
chr7 (369-433)||(28800878-28800942)
chr7 (369-433)||(45664768-45664832)
chr7 (369-433)||(47523725-47523789)
[»] chr6 (27 HSPs)
chr6 (369-433)||(12351661-12351725)
chr6 (369-433)||(495702-495766)
chr6 (369-433)||(9892963-9893027)
chr6 (369-433)||(12845003-12845067)
chr6 (369-433)||(12951708-12951772)
chr6 (369-433)||(14036620-14036684)
chr6 (371-433)||(12680261-12680323)
chr6 (369-433)||(15364533-15364597)
chr6 (369-433)||(21140939-21141003)
chr6 (369-433)||(22579424-22579488)
chr6 (369-433)||(24661084-24661148)
chr6 (369-433)||(25398002-25398066)
chr6 (369-433)||(27705422-27705486)
chr6 (369-433)||(28364911-28364975)
chr6 (367-433)||(11431713-11431779)
chr6 (371-433)||(11530225-11530287)
chr6 (367-433)||(27796907-27796973)
chr6 (369-433)||(2992615-2992679)
chr6 (369-433)||(6598464-6598528)
chr6 (369-433)||(16250877-16250941)
chr6 (369-433)||(18033600-18033664)
chr6 (369-433)||(20182145-20182209)
chr6 (369-433)||(21691571-21691635)
chr6 (369-433)||(22083838-22083902)
chr6 (369-433)||(22153782-22153846)
chr6 (369-433)||(23281786-23281850)
chr6 (369-433)||(30834035-30834099)
[»] chr5 (20 HSPs)
chr5 (369-433)||(11927861-11927925)
chr5 (371-433)||(20959508-20959570)
chr5 (369-433)||(27428087-27428151)
chr5 (371-429)||(22649406-22649464)
chr5 (369-433)||(17039706-17039770)
chr5 (369-433)||(23408980-23409044)
chr5 (369-433)||(23975635-23975699)
chr5 (369-433)||(33818636-33818700)
chr5 (366-433)||(23423828-23423895)
chr5 (371-433)||(12045727-12045789)
chr5 (369-433)||(7003805-7003867)
chr5 (369-433)||(618294-618358)
chr5 (369-429)||(2472789-2472849)
chr5 (369-433)||(8886926-8886990)
chr5 (369-433)||(15060973-15061037)
chr5 (369-433)||(17079405-17079469)
chr5 (401-433)||(18413556-18413588)
chr5 (369-433)||(25673303-25673367)
chr5 (369-433)||(32726801-32726865)
chr5 (369-433)||(36196394-36196458)
[»] chr2 (18 HSPs)
chr2 (369-433)||(37802453-37802517)
chr2 (366-433)||(26687763-26687830)
chr2 (369-433)||(29998634-29998698)
chr2 (369-433)||(1141532-1141596)
chr2 (369-433)||(23388453-23388517)
chr2 (369-433)||(30783334-30783398)
chr2 (369-433)||(31266350-31266414)
chr2 (369-433)||(32300447-32300511)
chr2 (370-433)||(28262360-28262423)
chr2 (371-433)||(8430292-8430354)
chr2 (371-433)||(21293788-21293850)
chr2 (371-433)||(32185828-32185890)
chr2 (371-423)||(8763640-8763692)
chr2 (369-433)||(15636810-15636874)
chr2 (369-433)||(20065149-20065213)
chr2 (369-433)||(22140439-22140503)
chr2 (369-433)||(27523007-27523071)
chr2 (369-433)||(32008948-32009012)
[»] chr3 (29 HSPs)
chr3 (371-433)||(20615420-20615482)
chr3 (369-433)||(8543465-8543529)
chr3 (369-433)||(26830517-26830581)
chr3 (369-433)||(28389969-28390033)
chr3 (371-433)||(1628211-1628273)
chr3 (369-430)||(46942486-46942547)
chr3 (369-433)||(4393425-4393489)
chr3 (369-433)||(9652574-9652638)
chr3 (369-433)||(11007758-11007822)
chr3 (369-433)||(11219134-11219198)
chr3 (369-433)||(11915754-11915818)
chr3 (369-433)||(17582376-17582440)
chr3 (369-433)||(18539800-18539864)
chr3 (370-430)||(23217284-23217344)
chr3 (369-433)||(27212856-27212920)
chr3 (369-433)||(27449084-27449148)
chr3 (369-433)||(27968911-27968975)
chr3 (369-433)||(49915447-49915511)
chr3 (369-432)||(1311034-1311097)
chr3 (369-432)||(19610335-19610398)
chr3 (371-433)||(8110335-8110397)
chr3 (369-433)||(5260933-5260997)
chr3 (369-433)||(7623606-7623670)
chr3 (369-433)||(16299857-16299921)
chr3 (369-433)||(18104605-18104669)
chr3 (369-433)||(19269939-19270003)
chr3 (369-433)||(19545506-19545570)
chr3 (369-433)||(29215988-29216052)
chr3 (369-433)||(30219334-30219398)
[»] chr4 (21 HSPs)
chr4 (369-433)||(22128387-22128451)
chr4 (369-433)||(45532654-45532718)
chr4 (366-433)||(5399607-5399674)
chr4 (369-430)||(9913259-9913320)
chr4 (369-433)||(18051837-18051901)
chr4 (369-433)||(25147719-25147783)
chr4 (369-433)||(27040100-27040164)
chr4 (369-433)||(32175812-32175876)
chr4 (369-433)||(46286304-46286368)
chr4 (369-433)||(55309288-55309352)
chr4 (371-433)||(18744147-18744209)
chr4 (369-430)||(38223511-38223572)
chr4 (369-433)||(39234940-39235002)
chr4 (369-433)||(2275753-2275817)
chr4 (369-433)||(22156676-22156740)
chr4 (369-433)||(30269063-30269127)
chr4 (369-433)||(30283062-30283126)
chr4 (369-433)||(33914057-33914121)
chr4 (369-433)||(36689675-36689739)
chr4 (369-433)||(37378698-37378762)
chr4 (369-429)||(37761917-37761977)
[»] scaffold0006 (1 HSPs)
scaffold0006 (369-431)||(121062-121124)
[»] chr8 (13 HSPs)
chr8 (369-430)||(29345072-29345133)
chr8 (369-433)||(3823131-3823195)
chr8 (369-433)||(17103940-17104004)
chr8 (369-433)||(17824691-17824755)
chr8 (369-433)||(21350476-21350540)
chr8 (369-433)||(31344247-31344311)
chr8 (366-433)||(43431631-43431698)
chr8 (369-433)||(4330976-4331040)
chr8 (369-433)||(8555379-8555443)
chr8 (369-433)||(9915115-9915179)
chr8 (369-425)||(15251608-15251664)
chr8 (369-433)||(18844619-18844683)
chr8 (369-433)||(24576099-24576163)
[»] scaffold0599 (1 HSPs)
scaffold0599 (369-433)||(7505-7569)
[»] scaffold0576 (1 HSPs)
scaffold0576 (369-433)||(9304-9368)
[»] scaffold0058 (1 HSPs)
scaffold0058 (369-433)||(74616-74680)
[»] scaffold0047 (1 HSPs)
scaffold0047 (369-433)||(58582-58646)
[»] scaffold0161 (1 HSPs)
scaffold0161 (366-433)||(6795-6862)
[»] scaffold0024 (1 HSPs)
scaffold0024 (366-433)||(112328-112395)
[»] scaffold0023 (1 HSPs)
scaffold0023 (366-433)||(39775-39842)
[»] scaffold0717 (1 HSPs)
scaffold0717 (369-433)||(994-1058)
[»] scaffold0603 (1 HSPs)
scaffold0603 (369-433)||(6054-6118)
[»] scaffold0219 (1 HSPs)
scaffold0219 (369-433)||(19603-19667)
[»] scaffold0184 (1 HSPs)
scaffold0184 (369-429)||(7460-7520)
[»] scaffold0108 (1 HSPs)
scaffold0108 (369-433)||(12653-12716)
[»] scaffold0087 (1 HSPs)
scaffold0087 (369-433)||(37862-37926)
[»] scaffold0076 (1 HSPs)
scaffold0076 (369-433)||(26483-26547)
[»] scaffold0069 (1 HSPs)
scaffold0069 (369-433)||(10158-10222)
[»] scaffold0007 (2 HSPs)
scaffold0007 (369-429)||(3746-3806)
scaffold0007 (369-433)||(276209-276273)
[»] scaffold0001 (2 HSPs)
scaffold0001 (369-433)||(8185-8249)
scaffold0001 (369-433)||(21917-21981)


Alignment Details
Target: chr1 (Bit Score: 237; Significance: 1e-131; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 39 - 346
Target Start/End: Original strand, 18787417 - 18787716
Alignment:
Q  39 aaggaagtcaacaattagagcggtagcgtaaacggaacaaactcaaaaaagaagagtgttgtgaatcttacaactagtcacaggctattataggaatctc 138  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18787417 aaggaagtcaacaattagagcagtagcgtaaacagaacaaactcaaaaa-gaagagtgttgtgaatcttacaactagtcataggctattataggaatctc 18787515  T
Q  139 catgtgggttgatgtgggatcattgtatatattgtgaatcattttattttcgtgtaaactttctacttataatagattgcatctaatgaagtttggctat 238  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||      |||||||||||||||||||||| |||||||||||||||||||||| |    
T  18787516 catgtgggtagatgtgggatcattgtatatattgtgaatcatttcat------gtaaactttctacttataatag-ttgcatctaatgaagtttggctgt 18787608  T
Q  239 tgcacataccactttagtgaaatcatttggttgagaaaattattaaaatgatcacaggtcgattattcacccacacttctatatcttgcaaatcaaaatg 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  18787609 tgcacataccactttagtgaaatcatttggttgagaaaattattaaaatgatcacaggtcgattattcacccacacttctatatcgtgaaaatcaaaatg 18787708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 369 - 635
Target Start/End: Original strand, 18787987 - 18788251
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaannnnnnnnnnnnnagtaatgcgagttggccataaa 468  Q
    |||||||||| ||||  |||||||||||||||||||||||||| ||| |||||||||||||||||             | |||||||| |||||||||||    
T  18787987 gcaaaatttagtgac--aattagagattgatgtcacgttttccctctttaaatttccctcactaatttttgcttttttaataatgcgaattggccataaa 18788084  T
Q  469 aggatttcttatgcaacaaa-ttcagttttcatttaaatttaacttagatattaagatgagacataagtttgatataataatttatagttaacactcatc 567  Q
    |||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||  ||||||| ||||||||    
T  18788085 aggatttcttatgcaaaaaaattcagttttcatttaaatttcacttagatattaagatg-gacataagtttgatataataatagatagttatcactcatc 18788183  T
Q  568 ttttagttttcttatctctttgcaaatcgtggacatatggttaattactcatcttttagtgtatatga 635  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18788184 ttttagttttcttatctctttgcaaattgtggacatatggttaattactcatcttttagtgtatatga 18788251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 13523036 - 13523100
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| |||||||| ||||||||||||    
T  13523036 gcaaaatttagtgacggaattagagagggatttcacgttttccctctctaaaattccctcactaa 13523100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 22789666 - 22789730
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| |||||||| |  ||| ||||||||||| |||||||||||||||||||||    
T  22789666 gcaaaatttagtgactgaattagatagagatttcacgttttccctctctaaatttccctcactaa 22789730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 38531245 - 38531309
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||  ||||||||||  ||| ||||||||||| |||||||||||||||||||||    
T  38531245 gcaaaatttagtgatggaattagagagagatttcacgttttccctctctaaatttccctcactaa 38531309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 16913654 - 16913716
Alignment:
Q  371 aaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| || ||||||||||  ||| ||| ||||||| |||||||||||||||||||||    
T  16913654 aaaatttaataacggaattagagagggatttcatgttttccctctctaaatttccctcactaa 16913716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 19081790 - 19081728
Alignment:
Q  371 aaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||| |||| ||||||||||  ||| ||||||||||| |||||||| ||||||||||||    
T  19081790 aaaatttagtgacagaattagagagggatttcacgttttccctctctaaaattccctcactaa 19081728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 19129678 - 19129616
Alignment:
Q  371 aaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||| |||| ||||||||||  ||| ||||||||||| |||||||| ||||||||||||    
T  19129678 aaaatttagtgacagaattagagagggatttcacgttttccctctctaaaattccctcactaa 19129616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 9259258 - 9259322
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  9259258 gcaaaatttagtgacggaattagagagagatttcacgttttccctcacaaaatttccctcactaa 9259322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 9464167 - 9464103
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  9464167 gcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaa 9464103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 12161878 - 12161814
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  12161878 gcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaa 12161814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 14486707 - 14486771
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||| | |||| ||||||||||  ||| ||||||||||| ||||||||||| |||||||||    
T  14486707 gcaaaattcagtgacggaattagagagagatttcacgttttccctctctaaattttcctcactaa 14486771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 15243149 - 15243085
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| |||||||| |  ||| ||||||||||| || ||||||||||||||||||    
T  15243149 gcaaaatttagtgacggaattagatagggatttcacgttttccctcactaaatttccctcactaa 15243085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 22158866 - 22158802
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  22158866 gcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaa 22158802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 22603612 - 22603548
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| | ||||||||| || ||||||||||||||||||    
T  22603612 gcaaaatttagtgacggaattagagagcgattttacgttttccctcactaaatttccctcactaa 22603548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 23457961 - 23457897
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  23457961 gcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaa 23457897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 41071910 - 41071974
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| | ||||||||| || ||||||||||||||||||    
T  41071910 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttccctcactaa 41071974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 52183742 - 52183678
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  52183742 gcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaa 52183678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 433
Target Start/End: Complemental strand, 29549479 - 29549418
Alignment:
Q  372 aaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    ||||||| |||| ||||||||||  ||| | ||||||||| || ||||||||||||||||||    
T  29549479 aaatttagtgacggaattagagagggattttacgttttccctcactaaatttccctcactaa 29549418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 6459281 - 6459217
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || |||||| |||||||||||    
T  6459281 gcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatatccctcactaa 6459217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 9110050 - 9110114
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || |||||| |||||||||||    
T  9110050 gcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatatccctcactaa 9110114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 12720873 - 12720809
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || |||||| |||||||||||    
T  12720873 gcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatatccctcactaa 12720809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 12989916 - 12989852
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    ||||| |||| |||| ||||||| ||  ||| ||||||||||| |||| ||||||||||||||||    
T  12989916 gcaaagtttagtgactgaattagggagagatttcacgttttccctctcaaaatttccctcactaa 12989852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 14760931 - 14760867
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||| ||  ||| ||| ||||||| || ||||||||||||||||||    
T  14760931 gcaaaatttagtgacggaattagtgagggatttcatgttttccctcactaaatttccctcactaa 14760867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 20408235 - 20408299
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| | || ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  20408235 gcaaaatttagtaacggaattagagagggatttcacgttttccctcacaaaatttccctcactaa 20408299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 20580973 - 20580909
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||||| ||  |||||||||  ||| ||||||||||| |||||||| ||| ||||||||    
T  20580973 gcaaaatttaattacgaaattagagagggatttcacgttttccctctctaaaattctctcactaa 20580909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 29093629 - 29093693
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    ||||||||||||||  ||||||||||   || | || |||||| |||||||||||||||||||||    
T  29093629 gcaaaatttaatgatggaattagagaggaattttacattttccatctctaaatttccctcactaa 29093693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 41752497 - 41752433
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || |||||| |||||||||||    
T  41752497 gcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatatccctcactaa 41752433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 45839356 - 45839292
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || |||||| |||||||||||    
T  45839356 gcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatatccctcactaa 45839292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 3e-16; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 22501658 - 22501594
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    ||||||||||||||| ||||||||||  ||| ||||||||||| |||||||||||||||||||||    
T  22501658 gcaaaatttaatgacggaattagagagggatttcacgttttccctctctaaatttccctcactaa 22501594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 22486458 - 22486394
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| |||||||||||||| ||||||||||||||||||    
T  22486458 gcaaaatttagtgacggaattagagagggatttcacgttttccgtcactaaatttccctcactaa 22486394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 816266 - 816330
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| ||||||||||| |||||||||    
T  816266 gcaaaatttagtgacggaattagagagggatttcacgttttccatctctaaattttcctcactaa 816330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 31042315 - 31042251
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| |||||||| ||||||||||||    
T  31042315 gcaaaatttagtgacagaattagagagggatttcacgttttccctctctaaaattccctcactaa 31042251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 39979699 - 39979763
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    ||||||||||||||| ||||||||||  ||| ||| ||||||| || ||||||||||||||||||    
T  39979699 gcaaaatttaatgacggaattagagagggatttcatgttttccctcactaaatttccctcactaa 39979763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 10050911 - 10050975
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| | ||||||||| || ||||||||||||||||||    
T  10050911 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttccctcactaa 10050975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 11036571 - 11036507
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  11036571 gcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaa 11036507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 20174084 - 20174020
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  20174084 gcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaa 20174020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 23577264 - 23577328
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| |||||||| |  ||| ||||||||||| || ||||||||||||||||||    
T  23577264 gcaaaatttagtgacggaattagatagggatttcacgttttccctcactaaatttccctcactaa 23577328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 24605902 - 24605838
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || |||||||| |||||||||    
T  24605902 gcaaaatttagtgacggaattagagagagatttcacgttttccctcactaaattttcctcactaa 24605838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 31425586 - 31425650
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| | ||||||||| || ||||||||||||||||||    
T  31425586 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttccctcactaa 31425650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 40847510 - 40847574
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || ||||||||||||||||||    
T  40847510 gcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatttccctcactaa 40847574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 429
Target Start/End: Original strand, 25777204 - 25777247
Alignment:
Q  386 aattagagattgatgtcacgttttccgtctctaaatttccctca 429  Q
    ||||||||| |||| ||||||||||| |||||||||||||||||    
T  25777204 aattagagagtgatttcacgttttccctctctaaatttccctca 25777247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 20429527 - 20429465
Alignment:
Q  371 aaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  20429527 aaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaa 20429465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 37135362 - 37135424
Alignment:
Q  371 aaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  37135362 aaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaa 37135424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 430
Target Start/End: Complemental strand, 32267411 - 32267350
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcac 430  Q
    |||||||||| |||| ||||||||||  ||| |  |||||||| ||||||||||||||||||    
T  32267411 gcaaaatttagtgacagaattagagagggattttgcgttttccctctctaaatttccctcac 32267350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 10222704 - 10222768
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    ||||||||||||||| ||||||||||  ||| | ||||||||  |||||||||||  ||||||||    
T  10222704 gcaaaatttaatgacagaattagagagggattttacgttttctttctctaaatttttctcactaa 10222768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 15014480 - 15014544
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || |||||| |||||||||||    
T  15014480 gcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatatccctcactaa 15014544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 21917409 - 21917473
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| | ||||||||| || |||||| |||||||||||    
T  21917409 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatgtccctcactaa 21917473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 28800942 - 28800878
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || |||||| |||||||||||    
T  28800942 gcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatatccctcactaa 28800878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 45664832 - 45664768
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| | ||||||||| || ||| ||||||||||||||    
T  45664832 gcaaaatttagtgacggaattagagagggattttacgttttccctcactatatttccctcactaa 45664768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 47523725 - 47523789
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || |||||| |||||||||||    
T  47523725 gcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatatccctcactaa 47523789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 12351661 - 12351725
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    ||||||||||||||| ||||||||||   || ||||||||||| |||||||||||||||||||||    
T  12351661 gcaaaatttaatgacggaattagagagaaatttcacgttttccctctctaaatttccctcactaa 12351725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 495702 - 495766
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| |||||||||| |||| | ||||||||| || ||||||||||||||||||    
T  495702 gcaaaatttagtgacggaattagagagtgattttacgttttccctcactaaatttccctcactaa 495766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 9893027 - 9892963
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || ||||||||||||||||||    
T  9893027 gcaaaatttagtgacggaattagagagggatttcacgttttccctcactaaatttccctcactaa 9892963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 12845067 - 12845003
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| ||||||||||| |||||||||    
T  12845067 gcaaaatttagtgacggaattagagagagatttcacgttttccctctctaaattttcctcactaa 12845003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 12951772 - 12951708
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    ||||||||||||||| ||||||||||  ||| ||| ||||||| || ||||||||||||||||||    
T  12951772 gcaaaatttaatgacggaattagagagggatttcatgttttccctcactaaatttccctcactaa 12951708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 14036684 - 14036620
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    ||||||||||||||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  14036684 gcaaaatttaatgacagaattagagagggatttcacgttttccctcacaaaatttccctcactaa 14036620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 12680261 - 12680323
Alignment:
Q  371 aaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    ||||||||||||| ||||||||||   || ||||||||||| ||||||||||| |||||||||    
T  12680261 aaaatttaatgacggaattagagaggaatttcacgttttccctctctaaattttcctcactaa 12680323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 15364533 - 15364597
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| | ||||||||| || ||||||||||||||||||    
T  15364533 gcaaaatttagtgacggaattagagaaggattttacgttttccctcactaaatttccctcactaa 15364597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 21141003 - 21140939
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  21141003 gcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaa 21140939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 22579424 - 22579488
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  22579424 gcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaa 22579488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 24661084 - 24661148
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    ||||||||||||||| ||||||||||  ||| ||| ||||||| || |||||| |||||||||||    
T  24661084 gcaaaatttaatgacggaattagagagagatttcatgttttccctcactaaatatccctcactaa 24661148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 25398066 - 25398002
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| | ||||||||| || ||||||||||||||||||    
T  25398066 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttccctcactaa 25398002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 27705486 - 27705422
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  27705486 gcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaa 27705422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 28364975 - 28364911
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| | ||||||||| || ||||||||||||||||||    
T  28364975 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttccctcactaa 28364911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 11431713 - 11431779
Alignment:
Q  367 ttgcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||||| |||| |||||| |||  ||| || |||||| | |||||||||||||||||||||    
T  11431713 ttgcaaaatttagtgacggaattaaagagggatatcgcgtttttcctctctaaatttccctcactaa 11431779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 11530287 - 11530225
Alignment:
Q  371 aaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||| |||| ||||||||||| ||| ||| ||||||| || |||||||| |||||||||    
T  11530287 aaaatttagtgacggaattagagatggatttcatgttttccctcactaaattttcctcactaa 11530225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 27796907 - 27796973
Alignment:
Q  367 ttgcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||||| |||| ||||||||||  ||| ||| ||||||| || |||||| |||||||||||    
T  27796907 ttgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatatccctcactaa 27796973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 2992679 - 2992615
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || |||||| |||||||||||    
T  2992679 gcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatatccctcactaa 2992615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 6598528 - 6598464
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || |||||| |||||||||||    
T  6598528 gcaaaatttagtgacggaattagagagggatttcaagttttccctcactaaatatccctcactaa 6598464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 16250877 - 16250941
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||| ||||||||    
T  16250877 gcaaaatttagtgacagaattagagagagatttcacgttttccctcacaaaatttctctcactaa 16250941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 18033600 - 18033664
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| ||  |||||||||||||||||    
T  18033600 gcaaaatttagtgacggaattagagagggatttcatgttttccctcattaaatttccctcactaa 18033664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 20182209 - 20182145
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || | |||||| |||||||||    
T  20182209 gcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttgcctcactaa 20182145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 21691571 - 21691635
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| ||||  |||||||||  ||| ||||||||| | |||||||| ||||||||||||    
T  21691571 gcaaaatttagtgacgaaattagagagggatttcacgtttttcctctctaaaattccctcactaa 21691635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 22083902 - 22083838
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||  |||| ||||||||||  ||| ||| ||||||| || ||||||||||||||||||    
T  22083902 gcaaaattttgtgacggaattagagagggatttcatgttttccctcactaaatttccctcactaa 22083838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 22153782 - 22153846
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || | |||||| |||||||||    
T  22153782 gcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttgcctcactaa 22153846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 23281850 - 23281786
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||| ||||    
T  23281850 gcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctccctaa 23281786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 30834035 - 30834099
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    ||||||||||||||| ||||||||||  ||| | ||||| ||| || |||||||||| |||||||    
T  30834035 gcaaaatttaatgacagaattagagagggattttacgttctccctcactaaatttccttcactaa 30834099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 11927861 - 11927925
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| |||||||||||||||||||| ||||||||||||    
T  11927861 gcaaaatttagtgacggaattagagagggatttcacgttttccgtctctaaaattccctcactaa 11927925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 20959570 - 20959508
Alignment:
Q  371 aaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||| |||| ||||||||||  ||| ||||||||||| |||||||||||||||||||||    
T  20959570 aaaatttagtgacggaattagagagagatttcacgttttccctctctaaatttccctcactaa 20959508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 27428087 - 27428151
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| ||||||||||| |||||||||    
T  27428087 gcaaaatttagtgacggaattagagagggatttcacgttttccctctctaaattttcctcactaa 27428151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 429
Target Start/End: Original strand, 22649406 - 22649464
Alignment:
Q  371 aaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctca 429  Q
    ||||||||||||| ||||||||||  ||| ||||||||||| |||||||||||| ||||    
T  22649406 aaaatttaatgacggaattagagaaggatttcacgttttccctctctaaatttctctca 22649464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 17039706 - 17039770
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || ||| ||||||||||||||    
T  17039706 gcaaaatttagtgacggaattagagagggatttcacgttttccctcactatatttccctcactaa 17039770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 23409044 - 23408980
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| | ||||||||| || ||||||||||||||||||    
T  23409044 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttccctcactaa 23408980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 23975699 - 23975635
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  23975699 gcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaa 23975635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 33818636 - 33818700
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || ||||||||||||||||||    
T  33818636 gcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatttccctcactaa 33818700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 433
Target Start/End: Original strand, 23423828 - 23423895
Alignment:
Q  366 gttgcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    ||||||||||||| |||| ||||||||||  ||| ||| ||||||| || ||||||||| ||||||||    
T  23423828 gttgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatttcactcactaa 23423895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 12045789 - 12045727
Alignment:
Q  371 aaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||| |||| ||||||||||  ||| | ||||||||| || ||||||||||||||||||    
T  12045789 aaaatttagtgacggaattagagaaggattttacgttttccctcactaaatttccctcactaa 12045727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 7003805 - 7003867
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  7003805 gcaaaatttagtgacggaattagaga--gatttcacgttttccctcacaaaatttccctcactaa 7003867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 618358 - 618294
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || |||||| |||||||||||    
T  618358 gcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatatccctcactaa 618294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 429
Target Start/End: Original strand, 2472789 - 2472849
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctca 429  Q
    ||||||||||||||| ||||||||||  ||| ||| ||||||| || |||||| |||||||    
T  2472789 gcaaaatttaatgacggaattagagagggatttcatgttttccctcactaaatatccctca 2472849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 8886926 - 8886990
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| | || |||||| || ||||||||||||||||||    
T  8886926 gcaaaatttagtgacggaattagagagggattttacattttccctcactaaatttccctcactaa 8886990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 15061037 - 15060973
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||| | || | ||||||||||||||||    
T  15061037 gcaaaatttagtgacggaattagagagggatttcacgtttttcctcacaaaatttccctcactaa 15060973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 17079469 - 17079405
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| | | ||||||| | |||||||||||||||||||    
T  17079469 gcaaaatttagtgacggaattagagagggatttgatgttttccctttctaaatttccctcactaa 17079405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 401 - 433
Target Start/End: Complemental strand, 18413588 - 18413556
Alignment:
Q  401 tcacgttttccgtctctaaatttccctcactaa 433  Q
    ||||||||||| |||||||||||||||||||||    
T  18413588 tcacgttttccctctctaaatttccctcactaa 18413556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 25673303 - 25673367
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||| | |||| ||||||||||  ||| ||| |||||| ||| ||||||||||||||||||    
T  25673303 gcaaaattcagtgacggaattagagagggatttcatgttttctgtcactaaatttccctcactaa 25673367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 32726801 - 32726865
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||   || |||| |||||| ||||||||||||| |||||||    
T  32726801 gcaaaatttagtgacggaattagagagaaatttcacattttccctctctaaatttccttcactaa 32726865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 36196458 - 36196394
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| |||| |||||| || | ||||||||||||||||    
T  36196458 gcaaaatttagtgacggaattagagagggatttcacattttccctcacaaaatttccctcactaa 36196394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 37802453 - 37802517
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| |||||||||| |||| | ||||||||| |||||||||||||||||||||    
T  37802453 gcaaaatttagtgacggaattagagactgattttacgttttccctctctaaatttccctcactaa 37802517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 433
Target Start/End: Original strand, 26687763 - 26687830
Alignment:
Q  366 gttgcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    ||||||||||||| |||| ||||||||||| ||| ||| |||||||||| ||||||||| ||||||||    
T  26687763 gttgcaaaatttagtgacggaattagagatggatttcatgttttccgtcactaaatttcgctcactaa 26687830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 29998634 - 29998698
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| |||||||| ||||||||||||    
T  29998634 gcaaaatttagtgacggaattagagaaggatttcacgttttccttctctaaaattccctcactaa 29998698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 1141596 - 1141532
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  1141596 gcaaaatttagtgacagaattagagagggatttcacgttttccctcacaaaatttccctcactaa 1141532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 23388453 - 23388517
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  23388453 gcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaa 23388517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 30783398 - 30783334
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || ||||||||||||||||||    
T  30783398 gcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatttccctcactaa 30783334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 31266414 - 31266350
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || ||||||||||||||||||    
T  31266414 gcaaaatttagtgacggaattagagagggatttcatgttttccctcgctaaatttccctcactaa 31266350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 32300511 - 32300447
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  32300511 gcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaa 32300447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 433
Target Start/End: Complemental strand, 28262423 - 28262360
Alignment:
Q  370 caaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    ||||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  28262423 caaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaa 28262360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 8430354 - 8430292
Alignment:
Q  371 aaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  8430354 aaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaa 8430292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 21293788 - 21293850
Alignment:
Q  371 aaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  21293788 aaaatttagtgacggaattagagagagatttcacgttttccctcacaaaatttccctcactaa 21293850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 32185890 - 32185828
Alignment:
Q  371 aaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  32185890 aaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaa 32185828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 423
Target Start/End: Complemental strand, 8763692 - 8763640
Alignment:
Q  371 aaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaattt 423  Q
    ||||||||||||| ||||||||||| ||| ||| ||||||| || ||||||||    
T  8763692 aaaatttaatgacggaattagagatggatttcatgttttccttcactaaattt 8763640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 15636810 - 15636874
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| ||||  |||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  15636810 gcaaaatttagtgacgaaattagagagggatttcacgttttccctcacaaaatttccctcactaa 15636874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 20065149 - 20065213
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||| | || | ||||||||||||||||    
T  20065149 gcaaaatttagtgactgaattagagagggatttcacgtttttcctcacaaaatttccctcactaa 20065213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 22140439 - 22140503
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||  || | ||||||||||||||||    
T  22140439 gcaaaatttagtgacggaattagagagggatttcacgttttctttcacaaaatttccctcactaa 22140503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 27523071 - 27523007
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || |||||| |||||||||||    
T  27523071 gcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatatccctcactaa 27523007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 32009012 - 32008948
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| | ||||||||| ||  |||||||||||||||||    
T  32009012 gcaaaatttagtgacggaattagagagggattttacgttttccctcattaaatttccctcactaa 32008948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.000000000001; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 20615420 - 20615482
Alignment:
Q  371 aaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    ||||||||||||| ||||||||||   || ||||||||||| |||||||||||||||||||||    
T  20615420 aaaatttaatgacagaattagagaggaatttcacgttttccttctctaaatttccctcactaa 20615482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 8543529 - 8543465
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    ||||||||||||||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  8543529 gcaaaatttaatgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaa 8543465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 26830517 - 26830581
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||  |||| ||||||||||  ||| ||||||||||| |||||||||||||||||||||    
T  26830517 gcaaaattttgtgacggaattagagagggatttcacgttttccctctctaaatttccctcactaa 26830581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 28390033 - 28389969
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || ||||||||||||||||||    
T  28390033 gcaaaatttagtgacggaattagagaaggatttcacgttttccctcactaaatttccctcactaa 28389969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 1628273 - 1628211
Alignment:
Q  371 aaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||| ||||  |||||||||  ||| ||||||||||| |||||||||||||||||||||    
T  1628273 aaaatttagtgacgaaattagagagggatttcacgttttccctctctaaatttccctcactaa 1628211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 369 - 430
Target Start/End: Complemental strand, 46942547 - 46942486
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcac 430  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| |||||||| |||||||||    
T  46942547 gcaaaatttagtgacagaattagagagggatttcacgttttccctctctaaaattccctcac 46942486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 4393425 - 4393489
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  4393425 gcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaa 4393489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 9652638 - 9652574
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  9652638 gcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaa 9652574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 11007758 - 11007822
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| | ||||||||| || ||||||||||||||||||    
T  11007758 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttccctcactaa 11007822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 11219198 - 11219134
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    ||||||||||||||| ||||||||||  ||| ||||||||||| || | |||||| |||||||||    
T  11219198 gcaaaatttaatgacggaattagagagggatttcacgttttccctcacaaaattttcctcactaa 11219134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 11915818 - 11915754
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| | ||||||||| || ||||||||||||||||||    
T  11915818 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttccctcactaa 11915754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 17582376 - 17582440
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  17582376 gcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaa 17582440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 18539864 - 18539800
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  18539864 gcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaa 18539800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 23217284 - 23217344
Alignment:
Q  370 caaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcac 430  Q
    ||||||||| |||| ||||||||||  ||| ||||||||||| ||||||||||| ||||||    
T  23217284 caaaatttagtgacggaattagagagggatttcacgttttccctctctaaattttcctcac 23217344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 27212856 - 27212920
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| |||||| |||  ||| ||||||||| | |||||||||||||||||||||    
T  27212856 gcaaaatttagtgacggaattaaagagggatttcacgtttttcctctctaaatttccctcactaa 27212920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 27449148 - 27449084
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| | ||||||||| || ||||||||||||||||||    
T  27449148 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttccctcactaa 27449084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 27968975 - 27968911
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    ||||||||||||||| ||||||||||  ||| ||| ||||||| || |||||||||| |||||||    
T  27968975 gcaaaatttaatgacagaattagagagggatttcatgttttccctcactaaatttccgtcactaa 27968911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 49915511 - 49915447
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || ||||||||||||||||||    
T  49915511 gcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatttccctcactaa 49915447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 432
Target Start/End: Original strand, 1311034 - 1311097
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcacta 432  Q
    |||||||||| |||| ||||||||||  ||| | ||||||||| || |||||||||||||||||    
T  1311034 gcaaaatttagtgacggaattagagagggattttacgttttccatcactaaatttccctcacta 1311097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 432
Target Start/End: Complemental strand, 19610398 - 19610335
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcacta 432  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || |||||||||||||||||    
T  19610398 gcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatttccctcacta 19610335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 8110397 - 8110335
Alignment:
Q  371 aaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    ||||||||||||| ||||||||||   || | ||||||||| || ||||||||||||||||||    
T  8110397 aaaatttaatgacggaattagagaggaattttacgttttccctcactaaatttccctcactaa 8110335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 5260997 - 5260933
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| | ||||||||| || ||| ||||||||||||||    
T  5260997 gcaaaatttagtgacggaattagagagggattttacgttttccctcactatatttccctcactaa 5260933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 7623606 - 7623670
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| |||| |||||| || | ||||||||||||||||    
T  7623606 gcaaaatttagtgacggaattagagagggatttcacattttccctcacaaaatttccctcactaa 7623670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 16299921 - 16299857
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || | ||||||||||||||||    
T  16299921 gcaaaatttagtgacggaattagagagggatttcatgttttccctcaccaaatttccctcactaa 16299857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 18104605 - 18104669
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || | ||||||||||||||||    
T  18104605 gcaaaatttagtgacggaattagagagggatttcatgttttccctcacaaaatttccctcactaa 18104669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 19269939 - 19270003
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| |||||| |||  ||| | ||||||||| || ||||||||||||||||||    
T  19269939 gcaaaatttagtgacggaattaaagagggattttacgttttccctcactaaatttccctcactaa 19270003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 19545570 - 19545506
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| | ||||||| | || ||||||||||||||||||    
T  19545570 gcaaaatttagtgacggaattagagagggattttacgtttttcctcactaaatttccctcactaa 19545506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 29216052 - 29215988
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||  ||||||||||  ||| ||| ||||||| || ||||||||||||||||||    
T  29216052 gcaaaatttagtgatggaattagagagggatttcatgttttccctcactaaatttccctcactaa 29215988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 30219398 - 30219334
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||| | || ||||||||||||||||||    
T  30219398 gcaaaatttagtgacggaattagagagggatttcatgtttttcctcactaaatttccctcactaa 30219334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000002; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 22128387 - 22128451
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || ||||||||||||||||||    
T  22128387 gcaaaatttagtgacagaattagagagggatttcacgttttccctcactaaatttccctcactaa 22128451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 45532654 - 45532718
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    ||||||||||||||| ||||||||||  ||| | ||||||||| || ||||||||||||||||||    
T  45532654 gcaaaatttaatgacggaattagagagggattttacgttttccctcactaaatttccctcactaa 45532718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 366 - 433
Target Start/End: Complemental strand, 5399674 - 5399607
Alignment:
Q  366 gttgcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    ||||||||||||| |||| ||||||||||  ||| ||| ||||||| || ||||||||||||||||||    
T  5399674 gttgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatttccctcactaa 5399607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 369 - 430
Target Start/End: Complemental strand, 9913320 - 9913259
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcac 430  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| |||||||| |||||||||    
T  9913320 gcaaaatttagtgacagaattagagagggatttcacgttttccctctctaaaattccctcac 9913259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 18051901 - 18051837
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  18051901 gcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaa 18051837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 25147783 - 25147719
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || ||||||||||||||||||    
T  25147783 gcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatttccctcactaa 25147719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 27040100 - 27040164
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  27040100 gcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaa 27040164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 32175812 - 32175876
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| | ||||||||| || ||||||||||||||||||    
T  32175812 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttccctcactaa 32175876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 46286304 - 46286368
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  46286304 gcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaa 46286368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 55309288 - 55309352
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| | ||||||||| || ||||||||||||||||||    
T  55309288 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttccctcactaa 55309352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 18744147 - 18744209
Alignment:
Q  371 aaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  18744147 aaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaa 18744209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 430
Target Start/End: Complemental strand, 38223572 - 38223511
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcac 430  Q
    |||||||||| |||| ||||||||||  ||| |  |||||||| ||||||||||||||||||    
T  38223572 gcaaaatttagtgacagaattagagagggattttgcgttttccctctctaaatttccctcac 38223511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 39235002 - 39234940
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| | ||  |||||||||  ||| ||||||||||| |||||||||||||||||||||    
T  39235002 gcaaaatttagtaacaaaattagaga--gatttcacgttttccttctctaaatttccctcactaa 39234940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 2275753 - 2275817
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || |||||| |||||||||||    
T  2275753 gcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatatccctcactaa 2275817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 22156676 - 22156740
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || |||||| |||||||||||    
T  22156676 gcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatatccctcactaa 22156740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 30269063 - 30269127
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| | || |||||| || ||||||||||||||||||    
T  30269063 gcaaaatttagtgacggaattagagagagattttacattttccctcgctaaatttccctcactaa 30269127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 30283126 - 30283062
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| | || |||||| || ||||||||||||||||||    
T  30283126 gcaaaatttagtgacggaattagagagagattttacattttccctcgctaaatttccctcactaa 30283062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 33914121 - 33914057
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||| | || ||||||||||||||||||    
T  33914121 gcaaaatttagtgacggaattagagagggatttcatgtttttcctcactaaatttccctcactaa 33914057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 36689739 - 36689675
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| |||||||||||  | ||||||||||||| ||||    
T  36689739 gcaaaatttagtgacggaattagagagggatttcacgttttcccacactaaatttccctcgctaa 36689675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 37378698 - 37378762
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || | ||||||||||||||||    
T  37378698 gcaaaatttagtgacggaattagagagggatttcatgttttccctcacaaaatttccctcactaa 37378762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 429
Target Start/End: Original strand, 37761917 - 37761977
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctca 429  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || |||||||| |||||    
T  37761917 gcaaaatttagtgacggaattagagagggatttcacgttttccctcactaaattttcctca 37761977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 431
Target Start/End: Original strand, 121062 - 121124
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcact 431  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| |||||||| ||||||||||    
T  121062 gcaaaatttagtgacggaattagagagggatttcacgttttccctctctaaaattccctcact 121124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.000000001; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 369 - 430
Target Start/End: Complemental strand, 29345133 - 29345072
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcac 430  Q
    |||||||||| |||| ||||||| ||  ||| ||||||||||| ||||||||||||||||||    
T  29345133 gcaaaatttagtgacggaattagggagggatttcacgttttccctctctaaatttccctcac 29345072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 3823195 - 3823131
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| | ||||||||| || ||||||||||||||||||    
T  3823195 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttccctcactaa 3823131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 17103940 - 17104004
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || ||||||||||||||||||    
T  17103940 gcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatttccctcactaa 17104004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 17824691 - 17824755
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || ||||||||||||||||||    
T  17824691 gcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatttccctcactaa 17824755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 21350540 - 21350476
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||| ||| | ||||||| | || ||||||||||||||||||    
T  21350540 gcaaaatttagtgacggaattagagatggattttacgtttttcctcactaaatttccctcactaa 21350476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 31344247 - 31344311
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    ||||||||||||||| ||||||||||   || |||| |||||| |||||||| ||||||||||||    
T  31344247 gcaaaatttaatgacggaattagagaggaatttcacattttccctctctaaaattccctcactaa 31344311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 433
Target Start/End: Original strand, 43431631 - 43431698
Alignment:
Q  366 gttgcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    ||||||||||||| ||||  |||||||||  ||| | ||||||||| || ||||||||||||||||||    
T  43431631 gttgcaaaatttagtgacgaaattagagagggattttacgttttccctcactaaatttccctcactaa 43431698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 4331040 - 4330976
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||   || ||||||||||| || | ||||||||||||||||    
T  4331040 gcaaaatttagtgacggaattagagaggaatttcacgttttccctcacaaaatttccctcactaa 4330976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 8555379 - 8555443
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| | | ||||||| || ||||||||||||||||||    
T  8555379 gcaaaatttagtgacggaattagagagagattttatgttttccctcactaaatttccctcactaa 8555443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 9915115 - 9915179
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| | ||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  9915115 gcaaaatttagtgacaggattagagagggatttcacgttttccctcacaaaatttccctcactaa 9915179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 425
Target Start/End: Complemental strand, 15251664 - 15251608
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttcc 425  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| ||| |||||||||    
T  15251664 gcaaaatttagtgacagaattagagaaggatttcacgttttccctctttaaatttcc 15251608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 18844619 - 18844683
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||||| ||  |||||||||  ||| ||| ||||||| || ||||||||||||||||||    
T  18844619 gcaaaatttaataacaaaattagagagggatttcatgttttccttcactaaatttccctcactaa 18844683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 24576099 - 24576163
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || |||||| |||||||||||    
T  24576099 gcaaaatttagtgacggaattagagagagatttcatgttttccctcgctaaatatccctcactaa 24576163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 7569 - 7505
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| | ||||||||| || ||||||||||||||||||    
T  7569 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttccctcactaa 7505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 9304 - 9368
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| | ||||||||| || ||||||||||||||||||    
T  9304 gcaaaatttagtgacggaattagagaaggattttacgttttccctcactaaatttccctcactaa 9368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 74616 - 74680
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || ||||||||||||||||||    
T  74616 gcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatttccctcactaa 74680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 58646 - 58582
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || ||||||||||||||||||    
T  58646 gcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatttccctcactaa 58582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 433
Target Start/End: Complemental strand, 6862 - 6795
Alignment:
Q  366 gttgcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||||||||||| ||||||||||   || ||| ||||||| || |||||||||||| |||||    
T  6862 gttgcaaaatttaatgacggaattagagaggaatttcatgttttccctcactaaatttcccttactaa 6795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 433
Target Start/End: Complemental strand, 112395 - 112328
Alignment:
Q  366 gttgcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||||||||||| ||||||||||  ||| | ||||||| | ||||| ||||| |||||||||    
T  112395 gttgcaaaatttaatgacggaattagagagggatttaacgtttttcctctctgaattttcctcactaa 112328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 433
Target Start/End: Original strand, 39775 - 39842
Alignment:
Q  366 gttgcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    ||||||||||||| |||| ||||||||||  ||| ||||||||||| ||   ||||||||||||||||    
T  39775 gttgcaaaatttagtgacggaattagagagagatttcacgttttccctcataaaatttccctcactaa 39842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 994 - 1058
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || |||||| |||||||||||    
T  994 gcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatatccctcactaa 1058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 6054 - 6118
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||  ||||||||||  ||| | ||||||||| || ||||||||||||||||||    
T  6054 gcaaaatttagtgatggaattagagagggattttacgttttccctcactaaatttccctcactaa 6118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 19667 - 19603
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || |||||| |||||||||||    
T  19667 gcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatatccctcactaa 19603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 429
Target Start/End: Complemental strand, 7520 - 7460
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctca 429  Q
    ||||| |||| |||| ||||||||||  ||| ||||||||||| || ||||||||||||||    
T  7520 gcaaagtttagtgacagaattagagagggatttcacgttttccctcactaaatttccctca 7460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 12716 - 12653
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||| || | ||||||||||||||||    
T  12716 gcaaaatttagtgacggaattagagagggat-tcacgttttccctcacaaaatttccctcactaa 12653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 37862 - 37926
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || | ||||||||||||||||    
T  37862 gcaaaatttagtgacggaattagagagggatttcatgttttccctcacaaaatttccctcactaa 37926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 26547 - 26483
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| | ||||||||| || |||||| |||||||||||    
T  26547 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatgtccctcactaa 26483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 10222 - 10158
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| ||  |||||||||||||||||    
T  10222 gcaaaatttagtgacggaattagagagggatttcatgttttccctcagtaaatttccctcactaa 10158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 29; Significance: 0.0000009; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 429
Target Start/End: Complemental strand, 3806 - 3746
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctca 429  Q
    |||||||||| |||| ||||||||||  ||| | ||||||||| || ||||||||||||||    
T  3806 gcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttccctca 3746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 276209 - 276273
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||||||||||  || | ||||||||||||||||    
T  276209 gcaaaatttagtgacggaattagagagggatttcacgttttctctcacaaaatttccctcactaa 276273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 29; Significance: 0.0000009; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 8185 - 8249
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || |||||| |||||||||||    
T  8185 gcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatatccctcactaa 8249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 21917 - 21981
Alignment:
Q  369 gcaaaatttaatgaccgaattagagattgatgtcacgttttccgtctctaaatttccctcactaa 433  Q
    |||||||||| |||| ||||||||||  ||| ||| ||||||| || |||||| |||||||||||    
T  21917 gcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatatccctcactaa 21981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University