View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17528_low_3 (Length: 444)

Name: NF17528_low_3
Description: NF17528
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17528_low_3
NF17528_low_3
[»] chr5 (22 HSPs)
chr5 (19-311)||(33173788-33174081)
chr5 (20-208)||(22308731-22308919)
chr5 (20-197)||(30910737-30910916)
chr5 (22-187)||(30912116-30912280)
chr5 (21-199)||(22047729-22047909)
chr5 (50-197)||(39603879-39604028)
chr5 (50-197)||(30859113-30859262)
chr5 (21-187)||(325139-325304)
chr5 (22-135)||(22307506-22307619)
chr5 (50-166)||(22049111-22049226)
chr5 (75-187)||(33172604-33172715)
chr5 (20-187)||(1010318-1010484)
chr5 (36-197)||(8521267-8521427)
chr5 (49-182)||(39605428-39605560)
chr5 (96-199)||(15548310-15548414)
chr5 (140-197)||(1102734-1102791)
chr5 (36-177)||(32757837-32757978)
chr5 (50-197)||(27705258-27705406)
chr5 (49-192)||(30857825-30857967)
chr5 (141-184)||(9220416-9220459)
chr5 (21-67)||(15941409-15941455)
chr5 (142-200)||(35081377-35081435)
[»] chr6 (29 HSPs)
chr6 (20-339)||(32506822-32507146)
chr6 (21-182)||(23397313-23397473)
chr6 (18-135)||(17839144-17839261)
chr6 (20-197)||(23392210-23392388)
chr6 (19-197)||(29381672-29381851)
chr6 (22-160)||(6702852-6702988)
chr6 (18-135)||(2687929-2688046)
chr6 (22-182)||(29380189-29380348)
chr6 (20-187)||(5187574-5187742)
chr6 (22-197)||(17837614-17837790)
chr6 (22-134)||(6701378-6701490)
chr6 (36-135)||(2687242-2687341)
chr6 (25-177)||(29722664-29722815)
chr6 (21-187)||(18346702-18346869)
chr6 (20-182)||(5186564-5186725)
chr6 (19-112)||(12256612-12256705)
chr6 (21-200)||(6452450-6452630)
chr6 (60-197)||(12669759-12669896)
chr6 (22-166)||(232174-232316)
chr6 (50-182)||(7310302-7310433)
chr6 (50-136)||(6452310-6452396)
chr6 (38-199)||(7311665-7311826)
chr6 (30-87)||(12256557-12256614)
chr6 (116-177)||(15728822-15728883)
chr6 (21-133)||(15730036-15730149)
chr6 (21-107)||(233597-233683)
chr6 (158-207)||(2352615-2352664)
chr6 (41-134)||(27080941-27081034)
chr6 (141-197)||(32505785-32505840)
[»] chr4 (63 HSPs)
chr4 (21-311)||(4714016-4714308)
chr4 (19-177)||(10168745-10168904)
chr4 (22-208)||(13165494-13165679)
chr4 (20-200)||(33231385-33231566)
chr4 (20-200)||(50546902-50547083)
chr4 (21-135)||(23201843-23201957)
chr4 (22-192)||(23203902-23204071)
chr4 (20-197)||(7707584-7707763)
chr4 (20-187)||(7708742-7708910)
chr4 (22-160)||(54866612-54866748)
chr4 (20-135)||(10167421-10167536)
chr4 (50-311)||(49342645-49342906)
chr4 (36-311)||(53435582-53435857)
chr4 (40-186)||(42810157-42810303)
chr4 (25-137)||(50548226-50548334)
chr4 (50-177)||(53205446-53205573)
chr4 (21-197)||(2312423-2312601)
chr4 (96-197)||(13166712-13166813)
chr4 (52-177)||(33232662-33232785)
chr4 (22-187)||(53432060-53432225)
chr4 (49-177)||(42871120-42871247)
chr4 (21-187)||(52241110-52241274)
chr4 (28-134)||(54865109-54865214)
chr4 (20-187)||(6348151-6348317)
chr4 (26-135)||(53204363-53204472)
chr4 (20-182)||(1588045-1588209)
chr4 (37-197)||(15450017-15450178)
chr4 (37-176)||(14524815-14524954)
chr4 (50-187)||(393591-393728)
chr4 (40-177)||(11438531-11438668)
chr4 (50-170)||(37882860-37882981)
chr4 (37-169)||(390230-390361)
chr4 (50-197)||(1794437-1794586)
chr4 (50-197)||(6349494-6349643)
chr4 (65-208)||(49343941-49344085)
chr4 (133-197)||(56085456-56085520)
chr4 (140-197)||(40723343-40723400)
chr4 (50-187)||(52963595-52963731)
chr4 (20-136)||(2310919-2311035)
chr4 (93-169)||(5591421-5591497)
chr4 (93-169)||(48126873-48126949)
chr4 (50-135)||(1188869-1188954)
chr4 (50-182)||(4871322-4871454)
chr4 (50-197)||(52239903-52240051)
chr4 (18-133)||(24426333-24426448)
chr4 (95-154)||(31965906-31965964)
chr4 (110-176)||(37884242-37884307)
chr4 (50-135)||(4129019-4129104)
chr4 (49-192)||(40792776-40792916)
chr4 (60-137)||(42872302-42872379)
chr4 (21-134)||(54485551-54485664)
chr4 (21-137)||(31968395-31968511)
chr4 (50-176)||(27847704-27847829)
chr4 (37-134)||(44501531-44501628)
chr4 (95-135)||(1587253-1587293)
chr4 (105-177)||(14524298-14524370)
chr4 (50-177)||(44503642-44503768)
chr4 (37-135)||(1190197-1190295)
chr4 (21-135)||(1831268-1831382)
chr4 (142-187)||(4871611-4871657)
chr4 (125-187)||(22069336-22069398)
chr4 (142-197)||(27850880-27850938)
chr4 (157-197)||(44498594-44498634)
[»] chr2 (38 HSPs)
chr2 (18-197)||(29219379-29219560)
chr2 (18-197)||(29332678-29332859)
chr2 (20-197)||(18616947-18617126)
chr2 (20-192)||(1082984-1083155)
chr2 (22-133)||(44192453-44192564)
chr2 (19-135)||(6030600-6030716)
chr2 (23-134)||(34468957-34469068)
chr2 (22-134)||(1085394-1085504)
chr2 (22-135)||(29220881-29220994)
chr2 (22-135)||(29334180-29334293)
chr2 (23-135)||(18615515-18615627)
chr2 (41-200)||(43033099-43033257)
chr2 (22-177)||(6032277-6032432)
chr2 (22-181)||(44191134-44191294)
chr2 (37-182)||(11315946-11316090)
chr2 (19-197)||(12359622-12359800)
chr2 (22-197)||(17459251-17459428)
chr2 (50-197)||(43034413-43034561)
chr2 (50-182)||(32470534-32470665)
chr2 (49-192)||(17460633-17460775)
chr2 (22-167)||(35903506-35903651)
chr2 (22-137)||(249022-249137)
chr2 (50-177)||(28562773-28562899)
chr2 (50-197)||(11317310-11317458)
chr2 (38-173)||(28561382-28561518)
chr2 (125-197)||(34464069-34464141)
chr2 (125-200)||(34467607-34467682)
chr2 (50-197)||(6030412-6030560)
chr2 (37-197)||(11547672-11547834)
chr2 (20-177)||(34147132-34147289)
chr2 (37-177)||(21664816-21664955)
chr2 (50-187)||(32469174-32469313)
chr2 (114-197)||(34513496-34513579)
chr2 (36-177)||(2277432-2277573)
chr2 (36-197)||(34512826-34512985)
chr2 (116-197)||(42641803-42641885)
chr2 (141-187)||(30749278-30749323)
chr2 (61-134)||(36011648-36011721)
[»] chr7 (49 HSPs)
chr7 (22-197)||(22335977-22336153)
chr7 (24-187)||(11501180-11501342)
chr7 (22-182)||(22538807-22538966)
chr7 (21-197)||(13564181-13564358)
chr7 (21-182)||(22337330-22337489)
chr7 (22-235)||(3413530-3413742)
chr7 (21-197)||(11502363-11502541)
chr7 (19-187)||(13562817-13562984)
chr7 (50-311)||(4299877-4300138)
chr7 (50-208)||(40509666-40509824)
chr7 (50-208)||(22115096-22115254)
chr7 (50-182)||(43459481-43459612)
chr7 (20-187)||(33779040-33779204)
chr7 (50-186)||(40508404-40508540)
chr7 (22-137)||(3414837-3414952)
chr7 (50-177)||(24282939-24283065)
chr7 (20-163)||(24844257-24844399)
chr7 (20-208)||(4298709-4298897)
chr7 (20-135)||(22537555-22537670)
chr7 (38-186)||(47059122-47059271)
chr7 (22-135)||(40738843-40738957)
chr7 (22-187)||(40812567-40812731)
chr7 (22-197)||(32254987-32255164)
chr7 (18-173)||(30310115-30310270)
chr7 (38-177)||(45455336-45455474)
chr7 (49-184)||(47060432-47060566)
chr7 (59-197)||(43460765-43460904)
chr7 (38-143)||(45454052-45454157)
chr7 (123-197)||(46201230-46201304)
chr7 (33-91)||(24844399-24844457)
chr7 (50-177)||(11344533-11344657)
chr7 (50-187)||(47454363-47454499)
chr7 (20-187)||(6173405-6173570)
chr7 (20-134)||(32602929-32603043)
chr7 (50-187)||(32256349-32256485)
chr7 (20-136)||(33096865-33096981)
chr7 (140-187)||(15992251-15992298)
chr7 (25-135)||(24281075-24281186)
chr7 (95-198)||(43441417-43441520)
chr7 (41-107)||(534099-534165)
chr7 (41-107)||(537331-537397)
chr7 (18-187)||(41079789-41079956)
chr7 (142-197)||(35295817-35295872)
chr7 (101-197)||(40811397-40811494)
chr7 (136-197)||(16755983-16756044)
chr7 (21-134)||(47456381-47456494)
chr7 (142-197)||(2414863-2414918)
chr7 (20-134)||(35664287-35664401)
chr7 (19-76)||(38539666-38539723)
[»] chr8 (47 HSPs)
chr8 (20-187)||(13116326-13116492)
chr8 (21-160)||(17339530-17339668)
chr8 (21-171)||(17338038-17338187)
chr8 (20-197)||(42098559-42098737)
chr8 (20-187)||(42100060-42100226)
chr8 (21-135)||(13117638-13117752)
chr8 (18-197)||(42872133-42872311)
chr8 (50-200)||(22551033-22551182)
chr8 (23-135)||(211594-211706)
chr8 (23-135)||(240550-240662)
chr8 (23-135)||(725217-725329)
chr8 (23-135)||(793905-794017)
chr8 (22-182)||(32797136-32797298)
chr8 (50-168)||(212684-212802)
chr8 (50-168)||(239452-239570)
chr8 (50-168)||(726307-726425)
chr8 (50-168)||(792807-792925)
chr8 (50-168)||(798808-798926)
chr8 (20-134)||(28418802-28418916)
chr8 (50-187)||(42870839-42870978)
chr8 (50-197)||(32798474-32798622)
chr8 (50-182)||(8571574-8571707)
chr8 (36-197)||(38696320-38696481)
chr8 (21-177)||(45437445-45437601)
chr8 (50-197)||(6397809-6397955)
chr8 (38-137)||(26696546-26696645)
chr8 (20-197)||(32695216-32695395)
chr8 (21-134)||(28420180-28420293)
chr8 (133-197)||(10669388-10669452)
chr8 (133-197)||(24192606-24192670)
chr8 (60-177)||(26697796-26697912)
chr8 (36-197)||(42877631-42877791)
chr8 (60-160)||(6398478-6398577)
chr8 (50-199)||(45281129-45281278)
chr8 (38-135)||(8570132-8570229)
chr8 (21-137)||(23708752-23708868)
chr8 (50-182)||(30787559-30787690)
chr8 (22-137)||(23702955-23703070)
chr8 (141-192)||(24305159-24305210)
chr8 (21-199)||(44076302-44076482)
chr8 (143-197)||(14840842-14840896)
chr8 (49-135)||(32693855-32693941)
chr8 (153-197)||(9854822-9854866)
chr8 (142-197)||(31845738-31845792)
chr8 (142-197)||(43202214-43202269)
chr8 (29-88)||(45394972-45395031)
chr8 (101-187)||(41629785-41629870)
[»] chr1 (42 HSPs)
chr1 (21-311)||(14470853-14471142)
chr1 (22-135)||(15234046-15234159)
chr1 (20-192)||(49802844-49803015)
chr1 (21-187)||(16963831-16963996)
chr1 (20-187)||(15232748-15232916)
chr1 (20-237)||(41873875-41874091)
chr1 (49-187)||(15072743-15072881)
chr1 (20-161)||(49801613-49801752)
chr1 (50-197)||(16123313-16123460)
chr1 (50-208)||(14477723-14477881)
chr1 (50-197)||(35943390-35943537)
chr1 (21-184)||(41872573-41872736)
chr1 (39-197)||(16965068-16965228)
chr1 (50-197)||(45584950-45585099)
chr1 (18-177)||(24499619-24499777)
chr1 (72-187)||(44999415-44999529)
chr1 (49-187)||(46467171-46467309)
chr1 (21-197)||(23091348-23091525)
chr1 (19-172)||(46318585-46318738)
chr1 (37-173)||(51042310-51042445)
chr1 (22-177)||(52628837-52628991)
chr1 (246-311)||(46468546-46468612)
chr1 (140-197)||(48096975-48097032)
chr1 (95-187)||(3617450-3617542)
chr1 (140-197)||(15746709-15746766)
chr1 (274-311)||(41873800-41873837)
chr1 (110-187)||(46110368-46110444)
chr1 (49-137)||(44278352-44278440)
chr1 (20-135)||(15071338-15071453)
chr1 (50-187)||(50444651-50444788)
chr1 (148-197)||(13147359-13147408)
chr1 (38-135)||(46111493-46111590)
chr1 (142-197)||(34350228-34350286)
chr1 (141-197)||(48527651-48527707)
chr1 (50-154)||(50442650-50442754)
chr1 (142-197)||(9226158-9226213)
chr1 (156-195)||(18821684-18821723)
chr1 (22-88)||(42244629-42244695)
chr1 (60-177)||(44276158-44276274)
chr1 (100-172)||(26286488-26286560)
chr1 (40-128)||(34351968-34352056)
chr1 (21-89)||(52627512-52627580)
[»] chr3 (56 HSPs)
chr3 (20-176)||(27837916-27838070)
chr3 (21-197)||(53614215-53614392)
chr3 (18-197)||(35370907-35371081)
chr3 (20-192)||(26887504-26887675)
chr3 (22-185)||(10732083-10732247)
chr3 (22-134)||(41264659-41264771)
chr3 (22-176)||(35372124-35372279)
chr3 (20-197)||(10730881-10731057)
chr3 (19-192)||(41263633-41263805)
chr3 (22-187)||(53612869-53613033)
chr3 (50-200)||(42684902-42685052)
chr3 (21-199)||(26886269-26886448)
chr3 (50-160)||(18458637-18458747)
chr3 (21-177)||(38240903-38241058)
chr3 (22-137)||(3817266-3817381)
chr3 (50-173)||(53194837-53194960)
chr3 (50-199)||(38242456-38242606)
chr3 (50-197)||(53420342-53420490)
chr3 (50-177)||(40364345-40364472)
chr3 (20-134)||(50809417-50809531)
chr3 (20-134)||(50866331-50866445)
chr3 (50-177)||(18442278-18442401)
chr3 (50-177)||(19487352-19487475)
chr3 (19-187)||(40244182-40244348)
chr3 (22-137)||(3811525-3811640)
chr3 (20-134)||(42686151-42686265)
chr3 (20-134)||(50810840-50810954)
chr3 (20-134)||(50864910-50865024)
chr3 (36-177)||(20288187-20288328)
chr3 (50-197)||(34819227-34819374)
chr3 (40-132)||(37736089-37736181)
chr3 (21-177)||(53624325-53624480)
chr3 (60-199)||(3208520-3208660)
chr3 (21-160)||(53187556-53187693)
chr3 (40-197)||(12107921-12108083)
chr3 (93-177)||(36175332-36175415)
chr3 (110-192)||(53622748-53622832)
chr3 (41-166)||(23443431-23443556)
chr3 (50-135)||(18197173-18197258)
chr3 (67-197)||(27841652-27841783)
chr3 (137-197)||(48083340-48083400)
chr3 (142-197)||(7270441-7270496)
chr3 (115-177)||(20336620-20336682)
chr3 (49-134)||(36176512-36176598)
chr3 (37-135)||(41544675-41544773)
chr3 (49-170)||(24403264-24403385)
chr3 (148-187)||(14745153-14745192)
chr3 (143-197)||(10301053-10301107)
chr3 (143-197)||(11224785-11224839)
chr3 (20-134)||(37735302-37735416)
chr3 (49-135)||(53421766-53421852)
chr3 (44-133)||(44182302-44182391)
chr3 (49-187)||(55328256-55328396)
chr3 (18-74)||(8795934-8795990)
chr3 (125-177)||(20314727-20314779)
chr3 (36-76)||(43174770-43174810)
[»] scaffold0019 (2 HSPs)
scaffold0019 (20-235)||(63037-63251)
scaffold0019 (20-134)||(61847-61961)
[»] scaffold0031 (2 HSPs)
scaffold0031 (50-197)||(123995-124141)
scaffold0031 (50-197)||(125174-125323)
[»] scaffold0472 (1 HSPs)
scaffold0472 (25-160)||(726-858)
[»] scaffold0201 (2 HSPs)
scaffold0201 (21-237)||(21124-21339)
scaffold0201 (274-311)||(21377-21414)
[»] scaffold0077 (2 HSPs)
scaffold0077 (20-197)||(54126-54305)
scaffold0077 (49-182)||(52617-52749)
[»] scaffold0118 (1 HSPs)
scaffold0118 (37-197)||(43516-43678)
[»] scaffold0011 (1 HSPs)
scaffold0011 (20-197)||(127429-127606)
[»] scaffold1251 (1 HSPs)
scaffold1251 (20-177)||(1048-1205)
[»] scaffold0078 (1 HSPs)
scaffold0078 (50-135)||(18838-18923)
[»] scaffold0034 (2 HSPs)
scaffold0034 (64-197)||(108553-108687)
scaffold0034 (38-182)||(109704-109847)
[»] scaffold1152 (1 HSPs)
scaffold1152 (21-192)||(2424-2594)
[»] scaffold2071 (1 HSPs)
scaffold2071 (22-197)||(624-799)
[»] scaffold0219 (1 HSPs)
scaffold0219 (142-185)||(8145-8188)
[»] scaffold0013 (1 HSPs)
scaffold0013 (123-187)||(32670-32733)


Alignment Details
Target: chr5 (Bit Score: 220; Significance: 1e-121; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 19 - 311
Target Start/End: Complemental strand, 33174081 - 33173788
Alignment:
Q  19 ataggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctcc 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  33174081 ataggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctct 33173982  T
Q  119 gtttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccataaacatcattaannnnnnnaaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||       |||    
T  33173981 gtttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtggtctaccatagacttcattaatttttttaaa 33173882  T
Q  219 ttttaaccgtttgatctttt-nnnnnnnggctaccattggattctgaatgactactttatcttacaatgatccaacaacaactaccattggatt 311  Q
    ||||||||||||||||||||        || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33173881 ttttaaccgtttgatcttttaaaaaaaaggttaccgttggattctgaatgactactttatcttacaatgatccaacaacaactaccattggatt 33173788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 22308919 - 22308731
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||||||| ||||| | |||||||||  |||||||||||||||||| |||| |||||    
T  22308919 taggcttattagatcgtttggtcccctaaataatttcatgttttcattttggtcccataattaataaaacaggcgttttagtccctcacattttgctccg 22308820  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccataaacatcattaa 208  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||| || |||||| |||| |||||    
T  22308819 tttgccaaataaatccatggttgttaagtttaaccccaaatgtctatggtggacctaccttaagagtggtccaccatagacattattaa 22308731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 20 - 197
Target Start/End: Original strand, 30910737 - 30910916
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||| |    
T  30910737 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctctg 30910836  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaa---atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||| |||||||||| || | ||||||| |||||| ||||   |||||| |||||||||||||||||||||| || ||||||    
T  30910837 tttaccaaataaat-ctcgactgttaactttaacaccaaatgatgtctttggtggaccaaccttaagagtggtccaccata 30910916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 22 - 187
Target Start/End: Complemental strand, 30912280 - 30912116
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||| |||||||    
T  30912280 ggcttattagatcgtttagtcccttatttaatttcatgttttcattttggtcccacaattaataaaagtggcgttttagtccctcacctttttctccgtt 30912181  T
Q  122 tgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
    ||||||||||||||   | |||||| |||||| |||||| ||||||||||||||||||||| ||||    
T  30912180 tgccaaataaatcccaag-tgttaactttaactccaaatatctatggtggaccaaccttaaaagtg 30912116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 21 - 199
Target Start/End: Original strand, 22047729 - 22047909
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    ||||||||| ||||   |||||||||| ||||||||| |||||||||||| ||||||| |||||||||    |||||| ||||||||  |||||||||||    
T  22047729 aggcttatttgatccaatggtcccttaattaatttcaagttttcattttggtcccacaattaataaaacgtacgttttggtccctcattttttcctccgt 22047828  T
Q  121 ttgccaaataaatccttggctgttaagtttaaccccaa---atgtctatggtggaccaaccttaagagtgctctaccataaa 199  Q
    ||||||||||||||| ||||||||||||||||| | ||   |||||||||||||| |||||||||||||| || ||||||||    
T  22047829 ttgccaaataaatcc-tggctgttaagtttaactctaaatgatgtctatggtggatcaaccttaagagtggtccaccataaa 22047909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 50 - 197
Target Start/End: Original strand, 39603879 - 39604028
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||||| |||||||||||||||||||| |||||||||    |||||| ||||||||  |||||||||||||||||||||||| | || ||||||||||    
T  39603879 taatttcaagttttcattttgatcccacaattaataaaacgtacgttttggtccctcaaattttcctccgtttgccaaataaat-catgactgttaagtt 39603977  T
Q  150 taaccccaa---atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||||||||   ||||||||||| |||||||||||| |||| || ||||||    
T  39603978 taaccccaaatgatgtctatggtagaccaaccttaaaagtgatccaccata 39604028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 30859262 - 30859113
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||||| |||||||||||| ||||||| |||||||||    ||||| |||||||||| |||||||| ||||||||||||| || ||| | ||||||||    
T  30859262 taatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcacattttcctctgtttgccaaataagtc-ttgaccgttaagtt 30859164  T
Q  150 taaccccaaatg---tctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||||||||||   ||||||||||||||| |||||||||| || ||||||    
T  30859163 taaccccaaatgatgtctatggtggaccaatcttaagagtggtccaccata 30859113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 21 - 187
Target Start/End: Complemental strand, 325304 - 325139
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    ||||||||| ||||   |||||||| |  |||||||| |||||||||||| ||||||| |||||||||    | |||| ||||||||  |||||||||||    
T  325304 aggcttatttgatctaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcaagttttcctccgt 325205  T
Q  121 ttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
    |||||||||||||||  | ||||||| |||||| | |||||||||||||||||||||||||| ||||    
T  325204 ttgccaaataaatccc-gactgttaactttaactctaaatgtctatggtggaccaaccttaatagtg 325139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 22307506 - 22307619
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    ||||||||||||||||||||||| ||   |||||||||||||||||||| | ||| | |||||||||  || ||||||||||||||| |||| ||| |||    
T  22307506 ggcttattagatcgtttggtcccctaaacaatttcatgttttcattttggttccataattaataaaacaggtgttttagtccctcactttttgctctgtt 22307605  T
Q  122 tgccaaataaatcc 135  Q
    ||||||||||||||    
T  22307606 tgccaaataaatcc 22307619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 50 - 166
Target Start/End: Complemental strand, 22049226 - 22049111
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||||| |||||||||||| ||||| | |||||||||    |||||| ||||||||| |||||||| ||||| ||||||||||| || ||||||||||    
T  22049226 taatttcaagttttcattttggtcccataattaataaaacgtacgttttggtccctcactttttcctctgtttggcaaataaatccctg-ctgttaagtt 22049128  T
Q  150 taaccccaaatgtctat 166  Q
    |||||||||||||||||    
T  22049127 taaccccaaatgtctat 22049111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 75 - 187
Target Start/End: Original strand, 33172604 - 33172715
Alignment:
Q  75 cacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggacc 174  Q
    ||||||||||||||| |  |||||||||| |||| |||| ||||||||||||||||||||| | | |||||||||||||||||||| ||||| ||||| |    
T  33172604 cacatttaataaaaaagatgttttagtccttcacatttttctccgtttgccaaataaatccatcggtgttaagtttaaccccaaatttctatagtgga-c 33172702  T
Q  175 aaccttaagagtg 187  Q
    ||| |||||||||    
T  33172703 aacattaagagtg 33172715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 1010484 - 1010318
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||||||| ||| || |||||||||||| ||||||||| ||||| |||||| ||||| |  |||||||| |   ||||| ||||||||| |||  |||||    
T  1010484 taggcttaataggtcatttggtcccttaattaatttcaagtttttattttggtcccataactaataaaactcatgttttggtccctcacgtttgtctccg 1010385  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
    |  | |||||||||||  | | ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  1010384 tcagtcaaataaatccc-gacggttaactttaaccccaaatgtgtatggtggaccaaccttaagagtg 1010318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 36 - 197
Target Start/End: Original strand, 8521267 - 8521427
Alignment:
Q  36 tttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcc 135  Q
    |||||||||||| ||||||||| |||||||||||| ||||| |  |||||||| |   ||||| ||||||||| |||  ||||||  | |||||||||||    
T  8521267 tttggtcccttaattaatttcaagttttcattttggtcccataactaataaaactcatgttttggtccctcacgtttgtctccgtcagtcaaataaatcc 8521366  T
Q  136 ttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
      | | ||||| ||||||||||||||| ||||||||||||||||||||| || || ||||||    
T  8521367 c-gacggttaactttaaccccaaatgtgtatggtggaccaaccttaagaatggtccaccata 8521427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 49 - 182
Target Start/End: Complemental strand, 39605560 - 39605428
Alignment:
Q  49 ttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagt 148  Q
    ||||||||| |||||||||||| ||||||| |||||||||    |||||| ||||||||  ||||||||||||||||||||||||||| | | ||||| |    
T  39605560 ttaatttcaagttttcattttggtcccacaattaataaaacatacgttttggtccctcagattttcctccgtttgccaaataaatcct-gacggttaact 39605462  T
Q  149 ttaaccccaaatgtctatggtggaccaaccttaa 182  Q
    | |||   |||||| ||||||||||||| |||||    
T  39605461 tcaactttaaatgtatatggtggaccaatcttaa 39605428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 15548310 - 15548414
Alignment:
Q  96 tttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtttaaccccaa---atgtctatggtggaccaaccttaagagtgctcta 192  Q
    ||||||||||||  |||||||||||||||||||||||||| || |||||||||||||||| ||   |||||| ||||||||||||||||||| || || |    
T  15548310 tttagtccctcat-ttttcctccgtttgccaaataaatcc-tgcctgttaagtttaaccctaaatgatgtctctggtggaccaaccttaagaatgatcca 15548407  T
Q  193 ccataaa 199  Q
    |||||||    
T  15548408 ccataaa 15548414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 1102734 - 1102791
Alignment:
Q  140 ctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||| || ||||||    
T  1102734 ctgttaactttaaccccaaatgtctatggtagaccaaccttaagagtggtccaccata 1102791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 177
Target Start/End: Original strand, 32757837 - 32757978
Alignment:
Q  36 tttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcc 135  Q
    |||||||||| |  |||||||  |||||||||||| ||||| |  |||||||| |   ||||| ||||||||  ||  ||||||   | |||||||||||    
T  32757837 tttggtccctcaaataatttccagttttcattttggtcccataaataataaaactcatgttttggtccctcaagttcacctccgccggtcaaataaatcc 32757936  T
Q  136 ttggctgttaagtttaaccccaaatgtctatggtggaccaac 177  Q
     ||| |||||| ||||||||||||||||||||||||||||||    
T  32757937 atgggtgttaactttaaccccaaatgtctatggtggaccaac 32757978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 27705406 - 27705258
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||||| |||||||||||| ||  ||| |||||||||    |||||| ||||||||  ||||||||| |||||||||||||| |  | | ||||| ||    
T  27705406 taatttcaagttttcattttggtcatacaattaataaaacgtacgttttggtccctcagattttcctccttttgccaaataaatac-agacagttaactt 27705308  T
Q  150 taaccccaa--atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||| || ||  |||||||||||||||||||||||| |||| || ||||||    
T  27705307 taatccaaatgatgtctatggtggaccaaccttaaaagtggtccaccata 27705258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 49 - 192
Target Start/End: Original strand, 30857825 - 30857967
Alignment:
Q  49 ttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagt 148  Q
    ||||||| | |||||||||||| ||||||| |||||||||     ||||| |||| |||  ||||||||| |||| ||||||||| |||  | ||||| |    
T  30857825 ttaattttaagttttcattttggtcccacaattaataaaacgtatgttttggtccttcagattttcctccttttgtcaaataaat-cttaacagttaact 30857923  T
Q  149 ttaaccccaaatgtctatggtggaccaaccttaagagtgctcta 192  Q
    |||||   ||||||||||| |||||||||||||| |||| ||||    
T  30857924 ttaactttaaatgtctatgatggaccaaccttaaaagtggtcta 30857967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 184
Target Start/End: Complemental strand, 9220459 - 9220416
Alignment:
Q  141 tgttaagtttaaccccaaatgtctatggtggaccaaccttaaga 184  Q
    |||||| ||||||| |||||||||||||||||||||| ||||||    
T  9220459 tgttaactttaacctcaaatgtctatggtggaccaacattaaga 9220416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 15941455 - 15941409
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcatt 67  Q
    ||||||||||||||||||||||||| |  |||||||| |||||||||    
T  15941455 aggcttattagatcgtttggtccctcaaataatttcaagttttcatt 15941409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 200
Target Start/End: Complemental strand, 35081435 - 35081377
Alignment:
Q  142 gttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccataaac 200  Q
    ||||| ||||||| ||||||||||| ||||| |||||||||||||  || |||||||||    
T  35081435 gttaactttaacctcaaatgtctatagtggatcaaccttaagagttgtccaccataaac 35081377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 159; Significance: 2e-84; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 20 - 339
Target Start/End: Complemental strand, 32507146 - 32506822
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||| |    
T  32507146 taggcttattagattgtttggtcacttatttaatttcatgttttcattttgatcccacatttaataaaaatggtgttttagtccctcacatttttctcag 32507047  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccataaacatcattaa----nnnnnnn 215  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| || |||||||               
T  32507046 tttgccaaataaatccttgactgttaagtttaaccccaaatatctatggtggaccaaccttaagagtggtctaccatatacttcattaatttttttttta 32506947  T
Q  216 aaattttaaccgtttgatctttt-nnnnnnnggctaccattggattctgaatgactactttatcttacaatgatccaacaacaactaccattggattnnn 314  Q
    ||||||||||| | |||||||||        | ||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||| |||       
T  32506946 aaattttaaccttctgatcttttaaaaaaaagactaccattaaattatgaatgactactttatcttacaatgatccaacaacaactaccattgaattaaa 32506847  T
Q  315 nnnnnnggctaccattggattatat 339  Q
          |||||||||||||||||||    
T  32506846 aaaaaaggctaccattggattatat 32506822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 21 - 182
Target Start/End: Complemental strand, 23397473 - 23397313
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  23397473 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgt 23397374  T
Q  121 ttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaa 182  Q
    |||||||||||||||  | | ||||| ||||||  |||||||||||||||||||||||||||    
T  23397373 ttgccaaataaatcc-cgaccgttaaatttaacttcaaatgtctatggtggaccaaccttaa 23397313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 17839261 - 17839144
Alignment:
Q  18 aataggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctc 117  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  17839261 aataggcttattagatcgtttggtcccttatttaatttcttgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctc 17839162  T
Q  118 cgtttgccaaataaatcc 135  Q
    ||||||||||||||||||    
T  17839161 cgtttgccaaataaatcc 17839144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 20 - 197
Target Start/End: Original strand, 23392210 - 23392388
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||    
T  23392210 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 23392309  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaaatg--tctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||||||||||||||||    |||||||||||||||||||||   ||| |||||| ||||||||| |||| || ||||||    
T  23392310 tttgccaaataaatcctaaa-tgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccata 23392388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 19 - 197
Target Start/End: Complemental strand, 29381851 - 29381672
Alignment:
Q  19 ataggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctcc 118  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||| ||||||||||| ||| ||||||||||    
T  29381851 ataggcttattagatcgtttggtcccttatttaatttcttattttcattttgatcccacaattaataaaaatgacgttttagtccttcatcttttcctcc 29381752  T
Q  119 gtttgccaaataaatccttggctgttaagtttaaccccaa---atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||| ||||||||||||    | |||||||||||||||||   |||||| |||||||| ||||||||||||| || ||||||    
T  29381751 gtttaccaaataaatcc--aacagttaagtttaaccccaaatgatgtctgtggtggacaaaccttaagagtgatccaccata 29381672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 22 - 160
Target Start/End: Complemental strand, 6702988 - 6702852
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  6702988 ggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacaattaataaaaatggcgtttta-tccctcacgttttcctccgtt 6702890  T
Q  122 tgccaaataaatccttggctgttaagtttaaccccaaat 160  Q
    |||||||||||||| || |||||||||||||| ||||||    
T  6702889 tgccaaataaatcc-tgactgttaagtttaactccaaat 6702852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 2688046 - 2687929
Alignment:
Q  18 aataggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||  ||    
T  2688046 aataggcttattagatcgtttggtcccttatttaatttcatgttttcattttagtcccacaattaataaaaatggcgttttagtccctcacctttttatc 2687947  T
Q  118 cgtttgccaaataaatcc 135  Q
    ||||||||||||||||||    
T  2687946 cgtttgccaaataaatcc 2687929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 22 - 182
Target Start/End: Original strand, 29380189 - 29380348
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||| ||||||    
T  29380189 ggcttattagatcatttggtcccttatttaatttcttgttttcattttggtcccacaattaacaaaaatggcgttttagtccctcaccttttcttccgtt 29380288  T
Q  122 tgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaa 182  Q
    ||||||||||||||  | | ||||| ||||||  ||||||| ||||||||| |||||||||    
T  29380289 tgccaaataaatcc-cgaccgttaattttaacttcaaatgtatatggtggatcaaccttaa 29380348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 5187742 - 5187574
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||| ||| |||||||  ||||    
T  5187742 taggcttattagattgtttggtcccttatttaatttcatgttttcattttggtcccataattaataaaaatggcgttttagttccttacctttttgtccg 5187643  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaa--atgtctatggtggaccaaccttaagagtg 187  Q
    |||||||||||||||| || | |||||||||||||| ||   ||||||| ||||||||||||||| ||||    
T  5187642 tttgccaaataaatcc-tgacggttaagtttaacccaaatgttgtctatagtggaccaaccttaaaagtg 5187574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 22 - 197
Target Start/End: Original strand, 17837614 - 17837790
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||| | ||||| |||||||||||||||||||||||||||| |||||| ||||||    
T  17837614 ggcttattagatcgtttggtcccttatttaatttattgttttcattttggttccacaattaataaaaatggcgttttagtccctcatcttttcttccgtt 17837713  T
Q  122 tgccaaataaatccttggctgttaagtttaaccccaa---atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    | ||||||||||||    | |||||||||||||||||   ||||||||||||||| ||| ||||||||| || ||||||    
T  17837714 taccaaataaatcc--aacagttaagtttaaccccaaatgatgtctatggtggacaaacattaagagtggtccaccata 17837790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 6701378 - 6701490
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||  |||||||||||||| ||||||||||||    
T  6701378 ggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacaattaataaaaatggtattttagtccctcacattttcctccgtt 6701477  T
Q  122 tgccaaataaatc 134  Q
    |||||||||||||    
T  6701478 tgccaaataaatc 6701490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 36 - 135
Target Start/End: Original strand, 2687242 - 2687341
Alignment:
Q  36 tttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcc 135  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  2687242 tttggtcccttatttaatttcatgttttcattttgatcccacaattaataaaaatggcgttttagtccttcacattttcctccgtttgccaaataaatcc 2687341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 25 - 177
Target Start/End: Original strand, 29722664 - 29722815
Alignment:
Q  25 ttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgc 124  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||| |||      
T  29722664 ttattagatcatttggtcccttatttaatttcatgttttcattttgatcccataattaataaaaatggcgttttagtccctcacattttcctccattttg 29722763  T
Q  125 caaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaac 177  Q
    ||||||||| ||   ||||||| ||||| || |||||| ||| ||||||||||    
T  29722764 caaataaat-ctcaactgttaaatttaatccaaaatgtatattgtggaccaac 29722815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 21 - 187
Target Start/End: Complemental strand, 18346869 - 18346702
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||  |||||||| |||  ||| ||    
T  18346869 aggcttattagatcatttggtcccttatttaatttcatattttcattttggtcccacaattaataaaaatggcgttttgatccctcacgtttgtctctgt 18346770  T
Q  121 ttgccaaataaatccttggctgttaagtttaaccccaa---atgtctatggtggaccaaccttaagagtg 187  Q
    |||||||||||||||  | ||||||| ||||||| |||   |||| || |||| ||||||||||||||||    
T  18346769 ttgccaaataaatcc--gactgttaattttaacctcaaatgatgtttacggtgaaccaaccttaagagtg 18346702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 5186564 - 5186725
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||| || |||| ||||||||| || ||||||| ||| ||| |||||||||||    
T  5186564 taggcttattagatcatttgatcccttatttaatttcatgttttcattttggtcacacaattaataaaagtgacgttttaatccatcatcttttcctccg 5186663  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaa 182  Q
    ||||||||||||||||  | | ||||| ||||||  ||||| ||||||||| || ||||||||    
T  5186664 tttgccaaataaatcc-cgaccgttaactttaacttcaaatatctatggtgaacaaaccttaa 5186725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 12256705 - 12256612
Alignment:
Q  19 ataggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttt 112  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||| || |||| ||||||||||| |||||||||||||||||||||    
T  12256705 ataggcttattagattgtttggtcccttatttaatttcatgttttcgttttggtcgcacaattaataaaaatagcgttttagtccctcaccttt 12256612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 21 - 200
Target Start/End: Complemental strand, 6452630 - 6452450
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    ||||||||| ||||  |||||||| ||  |||||||| |||||||||||| ||||| | |||||||||    ||||| |||||||||  |||||||||||    
T  6452630 aggcttatttgatccattggtcccctaaataatttcaagttttcattttggtcccataattaataaaacgtacgtttgagtccctcattttttcctccgt 6452531  T
Q  121 ttgccaaataaatccttggctgtt-aagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccataaac 200  Q
    |||||||||||||||||| | ||| ||||||||||| |||| ||||| ||| | |||| ||||||||| || |||||||||    
T  6452530 ttgccaaataaatccttgaccgttaaagtttaacccaaaatatctatagtgtatcaactttaagagtggtccaccataaac 6452450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 60 - 197
Target Start/End: Original strand, 12669759 - 12669896
Alignment:
Q  60 ttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtttaaccccaaa 159  Q
    |||| |||||| || |||| ||||||||| |   |||||||||| |||| ||||||||||||||| |||||||||  |  ||||||| ||||||| ||||    
T  12669759 tttttattttggtctcacaattaataaaactcaagttttagtccgtcactttttcctccgtttgctaaataaatctctaactgttaactttaacctcaaa 12669858  T
Q  160 tgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||| |||||||||||||||||||||||| || ||||||    
T  12669859 tgtgtatggtggaccaaccttaagagtggtccaccata 12669896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 232174 - 232316
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    |||||| ||||||  |||||||||||  ||||||||  ||||||||||| ||||| | |||||||||    |||||||||||||||| ||||||||||||    
T  232174 ggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaaca--cgttttagtccctcactttttcctccgtt 232271  T
Q  122 tgccaaataaatccttggctgttaagtttaaccccaaatgtctat 166  Q
    ||||||||||||||    ||||||| |||||| | ||||||||||    
T  232272 tgccaaataaatcccaaactgttaactttaactctaaatgtctat 232316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 50 - 182
Target Start/End: Original strand, 7310302 - 7310433
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||| | |||||||||||| ||||| | |||||||||     |||| ||||| |||  |||| |||||||| ||||||||||| | ||||||||||||    
T  7310302 taattttaagttttcattttggtcccataattaataaaacgtatgtttaagtccttcaggtttttctccgtttaccaaataaatc-tcggctgttaagtt 7310400  T
Q  150 taaccccaaatgtctatggtggaccaaccttaa 182  Q
    |||| |||||||||||||||| |||||||||||    
T  7310401 taactccaaatgtctatggtgaaccaaccttaa 7310433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 50 - 136
Target Start/End: Original strand, 6452310 - 6452396
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcct 136  Q
    |||||||| |||||| ||||| ||| | | |||||||||    |||||||||||||||| |||||||||||||||||||||||||||    
T  6452310 taatttcaagttttcgttttggtcctataattaataaaaggtacgttttagtccctcactttttcctccgtttgccaaataaatcct 6452396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 199
Target Start/End: Complemental strand, 7311826 - 7311665
Alignment:
Q  38 tggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcctt 137  Q
    ||||||||||  |||||| | |||||||||||||||||||| ||||||||  |  | |||| |||||| || ||||  ||  |||||||||||||||||     
T  7311826 tggtcccttaaataattttaagttttcattttgatcccacaattaataaacgtacc-ttttggtcccttacttttttatctatttgccaaataaatcctc 7311728  T
Q  138 ggctgttaagtttaaccccaa--atgtctatggtggaccaaccttaagagtgctctaccataaa 199  Q
      | ||||||||||| || ||  |||||||||||| |||||||||||||||| || ||||||||    
T  7311727 a-cagttaagtttaatccaaatgatgtctatggtgaaccaaccttaagagtggtccaccataaa 7311665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 12256557 - 12256614
Alignment:
Q  30 agatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaa 87  Q
    ||||||||||||||||||||||||||||| |||| |||||| ||| | | ||||||||    
T  12256557 agatcgtttggtcccttatttaatttcatatttttattttggtcctaaaattaataaa 12256614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 15728822 - 15728883
Alignment:
Q  116 tccgtttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaac 177  Q
    |||||||  |||||||||| || | |||||||||||||| ||||| ||||||||||||||||    
T  15728822 tccgtttatcaaataaatctttcggtgttaagtttaacctcaaatatctatggtggaccaac 15728883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 133
Target Start/End: Complemental strand, 15730149 - 15730036
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaat-aaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||||||||||||   ||||||||| | ||||||||   ||||||||||| ||||||| ||||| |||||   | |||| ||||||||| ||||| ||||    
T  15730149 aggcttattagattcattggtccctcaattaatttccatttttcattttggtcccacaattaataaaaaaatacattttggtccctcactttttcttccg 15730050  T
Q  120 tttgccaaataaat 133  Q
    ||||| ||||||||    
T  15730049 tttgctaaataaat 15730036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 233683 - 233597
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctca 107  Q
    ||||||| ||||||  ||||||| |||  ||||||||  ||||||||||| ||||| | ||||||||||   |||||||||||||||    
T  233683 aggcttaatagatcaattggtcctttaaataatttcaatttttcattttggtcccataattaataaaaaacacgttttagtccctca 233597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 2352615 - 2352664
Alignment:
Q  158 aatgtctatggtggaccaaccttaagagtgctctaccataaacatcatta 207  Q
    ||||||||||||||| |||| |||| |||| |||||||||||||| ||||    
T  2352615 aatgtctatggtggatcaactttaaaagtgatctaccataaacattatta 2352664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 27080941 - 27081034
Alignment:
Q  41 tcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatc 134  Q
    |||||||  |||||||  |||||||||||| ||  ||| ||||||||| |  | ||| |||||||||| |||| |||||||||| |||||||||    
T  27080941 tcccttaaataatttcgagttttcattttggtcttacaattaataaaatttacatttaagtccctcacttttttctccgtttgcgaaataaatc 27081034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 32505785 - 32505840
Alignment:
Q  141 tgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||||||||||||||||||||||||  |||| |||| ||||||||| || ||||||    
T  32505785 tgttaagtttaaccccaaatgtctataatgga-caacattaagagtggtccaccata 32505840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 132; Significance: 2e-68; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 21 - 311
Target Start/End: Original strand, 4714016 - 4714308
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctcc-g 119  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||| |||||||||||||||||||| ||||| ||||| ||||||      
T  4714016 aggcttattagatcgtttggtcccttatttaatttcatatttttattttggtcccacaattaataaaaatggcgttttaatcccttaccttatcctcctt 4714115  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccataaacatcattaannnnnnnaaat 219  Q
    ||||||||||||||| | | || |||||||||||  ||||||||||||||||| |||||||||||||| || |||||| || |||||||       ||||    
T  4714116 tttgccaaataaatcatcgactattaagtttaacttcaaatgtctatggtggatcaaccttaagagtggtccaccatagacttcattaa-tattttaaat 4714214  T
Q  220 tttaaccgtttgatctttt--nnnnnnnggctaccattggattctgaatgactactttatcttacaatgatccaacaacaactaccattggatt 311  Q
    ||||||| |||||||||||          ||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4714215 tttaaccatttgatctttttaaaaaaaaagctaccattagattatgaaggactactttatcttacaatgatccaacaacaactaccattggatt 4714308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 19 - 177
Target Start/End: Complemental strand, 10168904 - 10168745
Alignment:
Q  19 ataggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctcc 118  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||    
T  10168904 ataggcttattagatcgtttggtccattatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctcc 10168805  T
Q  119 gtttgccaaataaatccttggctgttaagtttaa-ccccaaatgtctatggtggaccaac 177  Q
    ||||||||||||||||| || | ||||| ||||| |||||||||||||||||||||||||    
T  10168804 gtttgccaaataaatccatgacagttaactttaacccccaaatgtctatggtggaccaac 10168745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 22 - 208
Target Start/End: Original strand, 13165494 - 13165679
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||  ||| ||||||||||||||||| |||| ||| |||||||||||||    
T  13165494 ggcttattagatcgtttggtccattatttaatttcatgttttcattttggtccctaatt-aataaaaatggcgttttcgtccttcatcttttcctccgtt 13165592  T
Q  122 tgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccataaacatcattaa 208  Q
    || |||||||||||||| ||||||||||||||  ||||| |||||||||||||||||||||||||| || |||||| || |||||||    
T  13165593 tgtcaaataaatccttgactgttaagtttaacttcaaatttctatggtggaccaaccttaagagtggtccaccatagacttcattaa 13165679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 20 - 200
Target Start/End: Original strand, 33231385 - 33231566
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||| |||||||||||||| ||||| | |||    
T  33231385 taggcttattagatcatttggtcccttatttaatttcatgttttcattttagtcccacaattaataaaaatggtgttttagtccctcatctttttcaccg 33231484  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccc-caaatgtctatggtggaccaaccttaagagtgctctaccataaac 200  Q
    |||||||||||||| | |   ||||||||||||||| |||||||||||||||||| |||||||  |||| || |||||||||    
T  33231485 tttgccaaataaattcatacttgttaagtttaaccctcaaatgtctatggtggacaaaccttagaagtggtccaccataaac 33231566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 20 - 200
Target Start/End: Original strand, 50546902 - 50547083
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    ||||| ||||||||| ||||||||||||||||||||||||| ||||||||  ||||||| |||||||||||||||||||||||||||| ||||||| |||    
T  50546902 taggcgtattagatcatttggtcccttatttaatttcatgtcttcattttagtcccacaattaataaaaatggcgttttagtccctcatcttttccaccg 50547001  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccc-caaatgtctatggtggaccaaccttaagagtgctctaccataaac 200  Q
    |||||||||||||||| |  |||||||||||||||| ||||||||||||| |||  |||||||  |||| || |||||||||    
T  50547002 tttgccaaataaatccctacctgttaagtttaaccctcaaatgtctatggcggataaaccttagaagtggtccaccataaac 50547083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 21 - 135
Target Start/End: Original strand, 23201843 - 23201957
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||| |||||||||||||||||||||    
T  23201843 aggcttattagattgtttggtcccttatttaatttcatgtttttattttggtcccacatttaataaaaatggcattttggtccctcaccttttcctccgt 23201942  T
Q  121 ttgccaaataaatcc 135  Q
    |||||||||||||||    
T  23201943 ttgccaaataaatcc 23201957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 22 - 192
Target Start/End: Complemental strand, 23204071 - 23203902
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||| ||| ||||| |||||||    
T  23204071 ggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacatttaataaaaatggcgttttggtccgtcatctttttctccgtt 23203972  T
Q  122 tgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctcta 192  Q
    |||||| |||||||   | | |||| |||||| | |||| ||||||||||| ||||||||| |||| ||||    
T  23203971 tgccaattaaatcccaag-tattaactttaactctaaatatctatggtggatcaaccttaaaagtggtcta 23203902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 20 - 197
Target Start/End: Original strand, 7707584 - 7707763
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||| |||||||||| ||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||| |||| |||||||| |    
T  7707584 taggtttattagatcttttagtcccttatttaatttcatgttttcattttggtcccacaattaataaaaatgacgttttagtccatcacattttcctctg 7707683  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaa---atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||||||||||||||| || | ||||  |||||| ||||   |||||| |||| ||||||||||||||||| || ||||||    
T  7707684 tttgccaaataaatcc-tgacggttagctttaacaccaaatgatgtctttggtagaccaaccttaagagtggtccaccata 7707763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 7708910 - 7708742
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgt--tttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctc 117  Q
    |||||||||||||||||||||||||||||||||||| ||||  |||||||||| | | ||| ||||||||| |||||||||||||||||||||||| |||    
T  7708910 taggcttattagatcgtttggtcccttatttaattttatgtgttttcattttggttctacaattaataaaagtggcgttttagtccctcacctttttctc 7708811  T
Q  118 cgtttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
     |||||||||||||||||   | |||||| |||||| | |||| ||||||||||||||||||||| ||||    
T  7708810 tgtttgccaaataaatcccaag-tgttaactttaactctaaatatctatggtggaccaaccttaaaagtg 7708742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 22 - 160
Target Start/End: Complemental strand, 54866748 - 54866612
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||| ||||||||||||| |||||||||||| || ||||||||||||    
T  54866748 ggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcc-acaattaataaaaatggtgttttagtcccttacgttttcctccgtt 54866650  T
Q  122 tgccaaataaatccttggctgttaagtttaaccccaaat 160  Q
    |||||||||||| | || |||||||||||||| ||||||    
T  54866649 tgccaaataaat-catgactgttaagtttaactccaaat 54866612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 10167421 - 10167536
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||| || |||||||||||||  ||||||||||    
T  10167421 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaattgcattttagtccctcatattttcctccg 10167520  T
Q  120 tttgccaaataaatcc 135  Q
    |||| |||||||||||    
T  10167521 tttgtcaaataaatcc 10167536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 50 - 311
Target Start/End: Original strand, 49342645 - 49342906
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||| | |||||||||||||||||||| |||||||||    ||||| |||||||||| ||||||||| ||||  ||||||||  || | |||||||||    
T  49342645 taattttaagttttcattttgatcccacaattaataaaatgtacgtttaagtccctcactttttcctccatttgttaaataaattattcggtgttaagtt 49342744  T
Q  150 taaccccaaatgtctatggtggaccaaccttaagagtgctctaccataaacatcattaannnnnnnaaattttaaccgtttgatctttt-nnnnnnnggc 248  Q
    |||||||||| |||||| ||||||||||||||| |||| || || |||||| |||||||       ||||||| |||||||||||||||         ||    
T  49342745 taaccccaaacgtctatagtggaccaaccttaaaagtggtccactataaacttcattaa-ttttttaaattttgaccgtttgatcttttaaaaaacaagc 49342843  T
Q  249 taccattggattctgaatgactactttatcttacaatgatccaacaacaactaccattggatt 311  Q
    ||||||| |||| |||| |||||||||||| |||||| ||||  ||||||| |||||||||||    
T  49342844 taccattagattatgaaggactactttatcctacaatcatcctccaacaacaaccattggatt 49342906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 36 - 311
Target Start/End: Complemental strand, 53435857 - 53435582
Alignment:
Q  36 tttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcc 135  Q
    |||| ||||||| ||||||||| |||||||||||| ||||| |  |||||||| |   ||||| | ||||||  ||| |||||||| | |||||||||||    
T  53435857 tttgatcccttaattaatttcaagttttcattttggtcccataagtaataaaactcatgttttggcccctcaagtttacctccgttggtcaaataaatcc 53435758  T
Q  136 ttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccataaacatcattaannnnnnnaaattttaaccgtttgatc- 234  Q
    ||| | ||||||||||||   ||||||||||||| ||||||||||||||||| || ||| || || |||||||       |||||||||||||||||||     
T  53435757 ttgacggttaagtttaactttaaatgtctatggtagaccaaccttaagagtggtccaccgtagacttcattaa-ttttttaaattttaaccgtttgatct 53435659  T
Q  235 ttttnnnnnnnggctaccattggattctgaatgactactttatcttacaatgatccaacaacaactaccattggatt 311  Q
    ||||         ||||||||||||| |||| ||||||| ||||||||  |||||| ||||||||||||||||||||    
T  53435658 ttttaaagaaacactaccattggattatgaaggactactctatcttaccgtgatccgacaacaactaccattggatt 53435582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 40 - 186
Target Start/End: Complemental strand, 42810303 - 42810157
Alignment:
Q  40 gtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttgg 139  Q
    ||||||||  ||||||||  ||||||||||| ||||||| |||||||||    | ||| |||||||||| ||||||||||||||||||||||||||||||    
T  42810303 gtcccttaaataatttcaacttttcattttggtcccacaattaataaaacgtacttttaagtccctcacattttcctccgtttgccaaataaatccttgg 42810204  T
Q  140 ctgttaagtttaa-ccccaaatgtctatggtggaccaaccttaagagt 186  Q
     |||||||||||| ||||| |||||||||||| ||||| |||||||||    
T  42810203 -tgttaagtttaacccccagatgtctatggtgaaccaatcttaagagt 42810157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 25 - 137
Target Start/End: Complemental strand, 50548334 - 50548226
Alignment:
Q  25 ttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgc 124  Q
    ||||||||||||||||||||||||||    |||||||||||||||| ||||||| ||||||| |||  |||||||||||||||| |||||||| ||||||    
T  50548334 ttattagatcgtttggtcccttattt----tcatgttttcattttggtcccacaattaataagaataacgttttagtccctcacattttcctctgtttgc 50548239  T
Q  125 caaataaatcctt 137  Q
    |||||||||||||    
T  50548238 caaataaatcctt 50548226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 53205573 - 53205446
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    ||||||||  ||||||||||  ||||||| |||| ||||  |||||||||||||||||| |||||||||||||||||||||||||| ||| |||||| ||    
T  53205573 taatttcagattttcattttcgtcccacaattaaaaaaataggcgttttagtccctcactttttcctccgtttgccaaataaatccatgggtgttaactt 53205474  T
Q  150 taaccccaaatgtctatggtggaccaac 177  Q
    ||| | ||||||||||||||||| ||||    
T  53205473 taatctcaaatgtctatggtggatcaac 53205446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 21 - 197
Target Start/End: Complemental strand, 2312601 - 2312423
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    ||||||||| ||||  |||||||||||  |||||||| |||| ||||||  ||||||| |||||||||    ||||| |||||||||| |||||||||||    
T  2312601 aggcttatttgatccattggtcccttagataatttcaagtttccattttagtcccacaattaataaaacgtacgtttaagtccctcactttttcctccgt 2312502  T
Q  121 ttgccaaataaatccttggctgttaagtttaaccccaa---atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||||||||||| | || | |||||||||||||||||   |||||||||||||||||| ||||| |||| || ||||||    
T  2312501 ttgccaaataaat-catgaccgttaagtttaaccccaaatgatgtctatggtggaccaatcttaaaagtggtccaccata 2312423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 96 - 197
Target Start/End: Complemental strand, 13166813 - 13166712
Alignment:
Q  96 tttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctacca 195  Q
    ||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||  |||||||||||| |||||||||| |||||||| || ||||    
T  13166813 tttagtccctcactttttcatccgtttgccaaataaatccttgactgttaagtttaacttcaaatgtctatgatggaccaaccgtaagagtgatccacca 13166714  T
Q  196 ta 197  Q
    ||    
T  13166713 ta 13166712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 52 - 177
Target Start/End: Complemental strand, 33232785 - 33232662
Alignment:
Q  52 atttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagttta 151  Q
    ||||||| |||| |||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||  | ||||| ||||    
T  33232785 atttcatatttttattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctccgtttgccaaataaat-cttttccgttaacttta 33232687  T
Q  152 accccaaatgtctatggtggaccaac 177  Q
    | | ||||||||||| ||||||||||    
T  33232686 a-ctcaaatgtctattgtggaccaac 33232662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 22 - 187
Target Start/End: Original strand, 53432060 - 53432225
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    |||||| ||| ||||||| ||||||| ||||||||| |||||||||||| ||||| |  |||||||| |   ||||| ||||||||  ||| ||| ||||    
T  53432060 ggcttaataggtcgtttgatcccttaattaatttcaagttttcattttggtcccataagtaataaaacttatgttttggtccctcaagtttgccttcgtt 53432159  T
Q  122 tgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
     | ||||||||||| || | ||||||||||||||||||||||||||||| |||||| |||||||||    
T  53432160 ggtcaaataaatccctgacggttaagtttaaccccaaatgtctatggtgaaccaactttaagagtg 53432225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 42871120 - 42871247
Alignment:
Q  49 ttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagt 148  Q
    |||||||||  ||||||||||||||||||| |||||||||    |||||| ||||||||| |||||||||||||||||||||||||| || |||||||||    
T  42871120 ttaatttcaaattttcattttgatcccacaattaataaaacgtacgttttggtccctcactttttcctccgtttgccaaataaatcc-tgactgttaagt 42871218  T
Q  149 ttaaccccaaatgtctatggtggaccaac 177  Q
    ||||  ||||||||||| |||||| ||||    
T  42871219 ttaattccaaatgtctacggtggatcaac 42871247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 21 - 187
Target Start/End: Complemental strand, 52241274 - 52241110
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    ||||| |||| |||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||    ||||||  | ||||| ||||||||||||    
T  52241274 aggctcattacatcgtttgatcccttatttaatttcatgttttcattttgattccacaattaataaaacgtacgttttgattcctcatcttttcctccgt 52241175  T
Q  121 ttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
    ||||||||||||| |  | | ||||| |||||| |||||| |||||||| ||||| |||||| ||||    
T  52241174 ttgccaaataaattc-cgaccgttaactttaactccaaatatctatggt-gaccatccttaaaagtg 52241110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 28 - 134
Target Start/End: Original strand, 54865109 - 54865214
Alignment:
Q  28 ttagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaa 127  Q
    |||||| ||||||||||||||||||||| |||||||||||||| ||||| | ||||| ||||| | ||||||||||||||| |||||||||||||| |||    
T  54865109 ttagattgtttggtcccttatttaattttatgttttcattttggtcccataattaat-aaaattgtgttttagtccctcacattttcctccgtttgtcaa 54865207  T
Q  128 ataaatc 134  Q
    |||||||    
T  54865208 ataaatc 54865214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 6348151 - 6348317
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||||||||| ||||   |||||||| |  |||||||| |||||||||||| ||||||| |||||||||    | |||| || |||||| |||||||| |    
T  6348151 taggcttatttgatcaaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttggttcctcactttttcctctg 6348250  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
    |||| ||||||||| || |   ||||||||||||| ||||||||||||||||||||||||||||||||    
T  6348251 tttgtcaaataaattct-gatggttaagtttaacctcaaatgtctatggtggaccaaccttaagagtg 6348317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 26 - 135
Target Start/End: Original strand, 53204363 - 53204472
Alignment:
Q  26 tattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgcc 125  Q
    ||||||||| |||| |||||||  |||||| ||||||||||||||||| |||| |||||||||  ||||||||||| |||||  |||| |||||||||||    
T  53204363 tattagatcatttgatcccttaaataatttaatgttttcattttgatctcacaattaataaaacaggcgttttagttcctcaattttttctccgtttgcc 53204462  T
Q  126 aaataaatcc 135  Q
    ||||||||||    
T  53204463 aaataaatcc 53204472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 1588209 - 1588045
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||||||||| |||| |||||||||| |  |||||| | |||||||||||  ||||||| |||||||||    ||||| | |||||||| ||||||||||    
T  1588209 taggcttatttgatcttttggtccctcaaataattttaagttttcattttagtcccacaattaataaaatgtacgtttaaatccctcactttttcctccg 1588110  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaa---atgtctatggtggaccaaccttaa 182  Q
    ||| ||||||||||   || |||||||||||||||||||   ||||||||||| ||||||||||||    
T  1588109 tttaccaaataaat-tatgactgttaagtttaaccccaaatgatgtctatggtagaccaaccttaa 1588045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 37 - 197
Target Start/End: Complemental strand, 15450178 - 15450017
Alignment:
Q  37 ttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcct 136  Q
    |||||||||||  |||||||| ||||||||| |||||||  | |||||||||    ||||| |||| || ||||||||||||||||||||||||||||      
T  15450178 ttggtcccttaaataatttcaggttttcattatgatcccttagttaataaaacgtacgtttaagtcgcttaccttttcctccgtttgccaaataaatc-- 15450081  T
Q  137 tggctgttaagtttaaccccaaa---tgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |  | |||||||||||| |||||   ||||||| |||||||||||||||||||| || ||||||    
T  15450080 ttacggttaagtttaactccaaatgttgtctatcgtggaccaaccttaagagtggtccaccata 15450017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 37 - 176
Target Start/End: Complemental strand, 14524954 - 14524815
Alignment:
Q  37 ttggtcccttatttaatttcatgtttt-cattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcc 135  Q
    ||||||| ||| ||||||||| ||||| ||||||||||||| | ||||||||| |   ||||||||| || || ||| ||||||||||| ||| ||||||    
T  14524954 ttggtcctttaattaatttcaagtttttcattttgatcccataattaataaaactcatgttttagtctcttacttttccctccgtttgcaaaa-aaatcc 14524856  T
Q  136 ttggctgttaagtttaaccccaaatgtctatggtggaccaa 176  Q
     |  |||||||||||||||||||||||||||| ||||||||    
T  14524855 ctaactgttaagtttaaccccaaatgtctatgatggaccaa 14524815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 50 - 187
Target Start/End: Complemental strand, 393728 - 393591
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    ||||||||  ||||||||||| ||||||| ||||||||||     |||| ||||||||| |||| |||||||||||||||||||||  | ||||||| ||    
T  393728 taatttcaaattttcattttggtcccacaattaataaaaagtatcttttggtccctcacttttttctccgtttgccaaataaatcccggactgttaactt 393629  T
Q  150 taaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
    |||  | |||||| ||| ||||||||||||||| ||||    
T  393628 taattctaaatgtttatagtggaccaaccttaaaagtg 393591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 11438668 - 11438531
Alignment:
Q  40 gtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttgg 139  Q
    ||||| ||| |||||| | ||||| |||||| || || | |||||||||    |||||| ||||||||| ||||||||| ||||| |||||||||  ||     
T  11438668 gtcccctatataatttgaagtttttattttggtctcataattaataaaacactcgttttggtccctcactttttcctccatttgctaaataaatctctga 11438569  T
Q  140 ctgttaagtttaaccccaaatgtctatggtggaccaac 177  Q
    || ||||||||||||||||||||||| |||||||||||    
T  11438568 cttttaagtttaaccccaaatgtctacggtggaccaac 11438531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 50 - 170
Target Start/End: Original strand, 37882860 - 37882981
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatc-cttggctgttaagt 148  Q
    |||||||| |||||||||||  ||||||| |||||||||    | |||| |||||||||||||||||||||||||||||||||||  ||| ||||||| |    
T  37882860 taatttcaagttttcattttagtcccacaattaataaaacgtaccttttggtccctcaccttttcctccgtttgccaaataaatcatttgactgttaact 37882959  T
Q  149 ttaaccccaaatgtctatggtg 170  Q
    |||| | ||||| |||||||||    
T  37882960 ttaatctcaaatatctatggtg 37882981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 390230 - 390361
Alignment:
Q  37 ttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcct 136  Q
    |||||||| ||  |||||||| |||||||||||| ||||||| |||||||||      |||| ||||||||  | ||||||||||||||||||||||||     
T  390230 ttggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtatattttggtccctcatttcttcctccgtttgccaaataaatcc- 390328  T
Q  137 tggctgttaagtttaaccccaaatgtctatggt 169  Q
    || ||||||||||||||| ||||||||| ||||    
T  390329 tgactgttaagtttaacctcaaatgtctgtggt 390361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 50 - 197
Target Start/End: Original strand, 1794437 - 1794586
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||||| ||||||||||||||| |||| |||||||||    | ||||  |||||||| |||||||| ||||| ||||||||||||   | ||||||||    
T  1794437 taatttcaagttttcattttgatctcacaattaataaaatataccttttgatccctcactttttcctctgtttgtcaaataaatcctaa-cggttaagtt 1794535  T
Q  150 taaccccaaatg---tctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||| ||||||||   | |||||||||||||||||||||||| || ||||||    
T  1794536 taatcccaaatgatgtatatggtggaccaaccttaagagtggtccaccata 1794586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 6349643 - 6349494
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||||| |||||||||||| ||||||| |||||||||    | |||| ||||||||||||||| ||||||| ||||||| ||||  |   ||||||||    
T  6349643 taatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcaccttttcttccgtttaccaaatagatcc-cgaacgttaagtt 6349545  T
Q  150 taaccccaa---atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||||||||   |||| ||||||||| |||||||||||||| || ||||||    
T  6349544 taaccccaaatgatgtatatggtggatcaaccttaagagtggtccaccata 6349494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 65 - 208
Target Start/End: Complemental strand, 49344085 - 49343941
Alignment:
Q  65 attttgatcccacatttaataaaaatggcgttttagtccct-caccttttcctccgtttgccaaataaatccttggctgttaagtttaaccccaaatgtc 163  Q
    |||||| ||||||| |||||||||   | |||| ||||||| ||| ||||||||||||||||||||||||| || | ||||||||||||||| || | ||    
T  49344085 attttggtcccacaattaataaaacgtgggtttaagtcccttcactttttcctccgtttgccaaataaatcattcgatgttaagtttaaccctaagtatc 49343986  T
Q  164 tatggtggaccaaccttaagagtgctctaccataaacatcattaa 208  Q
    ||||||||| ||| ||||| |||  || |||||| || |||||||    
T  49343985 tatggtggatcaatcttaaaagttgtccaccatagacttcattaa 49343941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 133 - 197
Target Start/End: Original strand, 56085456 - 56085520
Alignment:
Q  133 tccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||| || ||||||    
T  56085456 tccttggctgttaactttaaccccaaatgtctatggtggactaaccttaagagtggtccaccata 56085520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 40723343 - 40723400
Alignment:
Q  140 ctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||    
T  40723343 ctgttaagtttaacctcaaatgtatatggtggaccaaccttaagagtggtctaccata 40723400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 50 - 187
Target Start/End: Original strand, 52963595 - 52963731
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||||| |||||||||||| || |||| ||||||||      ||||| ||||||||  |||| ||||||||| |||||||||| | | ||||||| ||    
T  52963595 taatttcaagttttcattttggtctcacaattaataaatcgtatgttttggtccctcaagtttttctccgtttgtcaaataaatc-tcgactgttaactt 52963693  T
Q  150 taaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
    |||| ||||||||||||||||||||| |||||| ||||    
T  52963694 taactccaaatgtctatggtggaccagccttaaaagtg 52963731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 2310919 - 2311035
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||||||||| ||||   ||||||  || ||||||||| |||||||||||| ||||||| |||||||||    |||||| ||||||||  ||||||||||    
T  2310919 taggcttatttgatccaatggtcctctaattaatttcaagttttcattttggtcccacaattaataaaacgtacgttttggtccctcagattttcctccg 2311018  T
Q  120 tttgccaaataaatcct 136  Q
     ||||||||||||||||    
T  2311019 attgccaaataaatcct 2311035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 93 - 169
Target Start/End: Complemental strand, 5591497 - 5591421
Alignment:
Q  93 cgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggt 169  Q
    ||||||||||||||||  ||| ||| |||||||||||||||| ||||||||||| ||||||  ||||||||||||||    
T  5591497 cgttttagtccctcactcttttctctgtttgccaaataaatctttggctgttaaatttaacttcaaatgtctatggt 5591421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 48126873 - 48126949
Alignment:
Q  93 cgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggt 169  Q
    ||||||||||||||||  ||| ||| |||||||||||||||| ||||||||||| ||||||  ||||||||||||||    
T  48126873 cgttttagtccctcactcttttctctgtttgccaaataaatctttggctgttaaatttaacttcaaatgtctatggt 48126949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 135
Target Start/End: Original strand, 1188869 - 1188954
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcc 135  Q
    |||||||| ||||| |||||| ||||||| |||||||||    | |||| ||||||||| ||||||||||||||||||||||||||    
T  1188869 taatttcaagtttttattttggtcccacaattaataaaacgtacattttggtccctcactttttcctccgtttgccaaataaatcc 1188954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 50 - 182
Target Start/End: Complemental strand, 4871454 - 4871322
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    ||||||||||||||||||||| | | ||| |||||||||     |||| |||||| ||| |||| ||||||||| ||||||||||| ||  |||||| ||    
T  4871454 taatttcatgttttcattttggttctacaattaataaaacgtatgtttaagtcccccacgtttttctccgtttgtcaaataaatccctgaatgttaactt 4871355  T
Q  150 taaccccaaatgtctatggtggaccaaccttaa 182  Q
    ||| ||||||||| |||  ||||||||| ||||    
T  4871354 taatcccaaatgtttatcatggaccaactttaa 4871322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 50 - 197
Target Start/End: Original strand, 52239903 - 52240051
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaat-ccttggctgttaagt 148  Q
    ||||||||  |||| |||||||||||||| |||||||||    |||||| || | |||  |||| ||||||||||||||||||| ||  ||  ||||| |    
T  52239903 taatttcaaatttttattttgatcccacaattaataaaacgtacgttttggttcttcaggtttttctccgtttgccaaataaattccaagg--gttaact 52240000  T
Q  149 ttaaccccaa--atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||||| ||  ||||||||||||||||||||||||||||| || ||||||    
T  52240001 ttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccata 52240051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 24426333 - 24426448
Alignment:
Q  18 aataggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctc 117  Q
    |||||||||||| ||||   |||||||| |  |||||||| |||||||||||| || |||| |||||||||    | |||| ||||||||| ||||||||    
T  24426333 aataggcttatttgatccaatggtccctcaaataatttcaagttttcattttggtctcacaattaataaaacgtaccttttggtccctcactttttcctc 24426432  T
Q  118 cgtttgccaaataaat 133  Q
    ||||||||||| ||||    
T  24426433 cgtttgccaaaaaaat 24426448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 95 - 154
Target Start/End: Original strand, 31965906 - 31965964
Alignment:
Q  95 ttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtttaacc 154  Q
    |||| ||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  31965906 ttttggtccctcactttttcctccgtttgccaaataaatcc-tgggtgttaagtttaacc 31965964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 37884307 - 37884242
Alignment:
Q  110 ttttcctccgtttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaa 176  Q
    ||||||||||||||||||||||||||  | ||||||||||||||||||||| | ||||||| |||||    
T  37884307 ttttcctccgtttgccaaataaatcc-agactgttaagtttaaccccaaatatatatggtgaaccaa 37884242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 135
Target Start/End: Original strand, 4129019 - 4129104
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcc 135  Q
    |||||||| |||||||||||| ||||||| |||||||||    | |||| |||||| || |||| |||||||||||||||||||||    
T  4129019 taatttcaagttttcattttggtcccacaattaataaaatgtacattttggtcccttacttttttctccgtttgccaaataaatcc 4129104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 192
Target Start/End: Original strand, 40792776 - 40792916
Alignment:
Q  49 ttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagt 148  Q
    ||||||| | |||||||||||| ||||||| |||||||||    | |||| ||||||||  |||| |||||||||||||||||||||      ||||| |    
T  40792776 ttaattttaagttttcattttggtcccacaattaataaaacatacattttggtccctcagatttttctccgtttgccaaataaatcc---cgagttaact 40792872  T
Q  149 ttaaccccaaatgtctatggtggaccaaccttaagagtgctcta 192  Q
    |||||   |||||||||| ||||||||||||||| |||| ||||    
T  40792873 ttaactttaaatgtctatagtggaccaaccttaaaagtggtcta 40792916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 137
Target Start/End: Complemental strand, 42872379 - 42872302
Alignment:
Q  60 ttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcctt 137  Q
    ||||||||||| ||||| | |||||||||    |||||| ||||||||| |||||||||||||||||||||| |||||    
T  42872379 ttttcattttggtcccataattaataaaatgtacgttttggtccctcactttttcctccgtttgccaaataattcctt 42872302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 134
Target Start/End: Complemental strand, 54485664 - 54485551
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    ||||||| ||||||  || ||||| ||  |||||||| |||||||||||||||||| | |||||||||    ||||||  |||||||  ||||| |||||    
T  54485664 aggcttaatagatcacttagtcccctaaataatttcaagttttcattttgatcccataattaataaaacattcgttttgatccctcaagttttcatccgt 54485565  T
Q  121 ttgccaaataaatc 134  Q
    ||||||||||||||    
T  54485564 ttgccaaataaatc 54485551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 137
Target Start/End: Complemental strand, 31968511 - 31968395
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    ||||||||||||||    |||||| || ||||||| |  ||||||||||| ||| ||| |||||||||    |||||| |||| |||| |||||||| ||    
T  31968511 aggcttattagatccaacggtcccctaattaattttaatttttcattttggtcctacaattaataaaacgtacgttttggtccttcactttttcctctgt 31968412  T
Q  121 ttgccaaataaatcctt 137  Q
    |||||||||||||||||    
T  31968411 ttgccaaataaatcctt 31968395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 50 - 176
Target Start/End: Original strand, 27847704 - 27847829
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttag-tccctcaccttttcctccgtttgccaaataaatccttggctgttaagt 148  Q
    |||||||| ||||| |||||| ||||||| ||||||||| ||   |||| | ||||| |  ||||| ||||||||||||||||||||  | | |||||||    
T  27847704 taatttcaagtttttattttggtcccacaattaataaaa-tgtatttttcggtcccttaatttttcttccgtttgccaaataaatcca-gacggttaagt 27847801  T
Q  149 ttaaccccaaatgtctatggtggaccaa 176  Q
    |||||||||||||| |||||||| ||||    
T  27847802 ttaaccccaaatgtatatggtgggccaa 27847829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 134
Target Start/End: Original strand, 44501531 - 44501628
Alignment:
Q  37 ttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatc 134  Q
    ||||||||| |  |||||||| ||||||||| || ||||| | |||||||||    ||||| |||||||||| |||| ||| ||||||||||||||||    
T  44501531 ttggtccctcaaataatttcaagttttcattctggtcccataattaataaaacgtacgtttaagtccctcacttttttctctgtttgccaaataaatc 44501628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 95 - 135
Target Start/End: Original strand, 1587253 - 1587293
Alignment:
Q  95 ttttagtccctcaccttttcctccgtttgccaaataaatcc 135  Q
    |||| ||||||||| ||||||||||||||||||||||||||    
T  1587253 ttttggtccctcactttttcctccgtttgccaaataaatcc 1587293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 14524298 - 14524370
Alignment:
Q  105 tcaccttttcctccgtttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaac 177  Q
    |||| ||||||||||||||| ||| ||||   ||||| |||||||||| || |||| ||||||||||||||||    
T  14524298 tcactttttcctccgtttgctaaaaaaatttatggcttttaagtttaatccaaaatatctatggtggaccaac 14524370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 44503768 - 44503642
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaa-gt 148  Q
    |||||||| ||||| |||||| || |||| ||||||||  |  | |||| ||||||||| |||||||| |||||||||||||||||  | | |||||  |    
T  44503768 taatttcaagtttttattttggtctcacaattaataaacgta-cattttggtccctcactttttcctctgtttgccaaataaatcc-cgaccgttaactt 44503671  T
Q  149 ttaaccccaaatgtctatggtggaccaac 177  Q
    ||||||| |||||||||||||| ||||||    
T  44503670 ttaaccctaaatgtctatggtgaaccaac 44503642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 135
Target Start/End: Complemental strand, 1190295 - 1190197
Alignment:
Q  37 ttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcc 135  Q
    ||||||||| |  |||||| | |||||||||||| ||||| | |||||||||    ||||| ||| |||||| |||| ||| |||||||||||||||||    
T  1190295 ttggtccctcaaataattttaagttttcattttggtcccataattaataaaacgtacgtttaagtacctcacttttttctctgtttgccaaataaatcc 1190197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 135
Target Start/End: Complemental strand, 1831382 - 1831268
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    ||||||||| ||||   |||||||| | ||||||||| |||||||||||  ||||||| |||||||||    | |||| ||||||||  ||||||||| |    
T  1831382 aggcttatttgatccaatggtccctcaattaatttcaagttttcattttagtcccacaattaataaaacgtacattttggtccctcattttttcctccat 1831283  T
Q  121 ttgccaaataaatcc 135  Q
    ||  |||||||||||    
T  1831282 ttttcaaataaatcc 1831268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 4871611 - 4871657
Alignment:
Q  142 gttaagtttaaccc-caaatgtctatggtggaccaaccttaagagtg 187  Q
    ||||| |||||||| |||||||||||||||||||||||| |||||||    
T  4871611 gttaactttaaccctcaaatgtctatggtggaccaacctaaagagtg 4871657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 22069336 - 22069398
Alignment:
Q  125 caaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
    ||||||||||  ||| |||||| ||||||  |||||||||||||||||| |||||||| ||||    
T  22069336 caaataaatcaatggttgttaactttaacttcaaatgtctatggtggacgaaccttaaaagtg 22069398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 27850938 - 27850880
Alignment:
Q  142 gttaagtttaaccccaaatg---tctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||||||||||| ||||||   ||||||||||||||||||||| |||| || ||||||    
T  27850938 gttaagtttaacctcaaatgatgtctatggtggaccaaccttaaaagtggtccaccata 27850880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 44498594 - 44498634
Alignment:
Q  157 aaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||||||||||||||| |||||||||||||| || ||||||    
T  44498594 aaatgtctatggtggatcaaccttaagagtggtccaccata 44498634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 8e-62; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 18 - 197
Target Start/End: Original strand, 29219379 - 29219560
Alignment:
Q  18 aataggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctc 117  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  29219379 aataggcttattagatcgtttggtcctttatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctc 29219478  T
Q  118 cgtttgccaaataaatccttggctgttaagtttaaccccaa---atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||||||||||||||||    |||||||||||||||||||   |||||||||||||||||| ||||| |||| || ||||||    
T  29219479 cgtttgccaaataaatcc-caactgttaagtttaaccccaaatgatgtctatggtggaccaatcttaaaagtggtccaccata 29219560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 18 - 197
Target Start/End: Original strand, 29332678 - 29332859
Alignment:
Q  18 aataggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctc 117  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  29332678 aataggcttattagatcgtttggtcctttatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctc 29332777  T
Q  118 cgtttgccaaataaatccttggctgttaagtttaaccccaa---atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||||||||||||||||    |||||||||||||||||||   |||||||||||||||||| ||||| |||| || ||||||    
T  29332778 cgtttgccaaataaatcc-caactgttaagtttaaccccaaatgatgtctatggtggaccaatcttaaaagtggtccaccata 29332859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 20 - 197
Target Start/End: Complemental strand, 18617126 - 18616947
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18617126 taggcttattagatcatttggtcctttatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccg 18617027  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaa---atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||||||||||||||    || ||||||||||||||||   |||||||||||||||||  ||||| |||| || ||||||    
T  18617026 tttgccaaataaatcc-caactattaagtttaaccccaaatgatgtctatggtggaccagtcttaaaagtggtccaccata 18616947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 20 - 192
Target Start/End: Original strand, 1082984 - 1083155
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||| |||| ||| ||||| |||||    
T  1082984 taggcttattatatcgtttggtcccttatttaatttcatattttcattttggtcccacatttaataaaaatggtgttttggtccgtcatctttttctccg 1083083  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctcta 192  Q
    |||||||| |||||||   | |||||| |||||| | |||| ||||||||||| ||||||||| |||| ||||    
T  1083084 tttgccaattaaatcccaag-tgttaactttaactctaaatatctatggtggatcaaccttaaaagtggtcta 1083155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 44192564 - 44192453
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||| ||||||||||||    
T  44192564 ggcttattagattgtttggtcccttatttaatttcatgttttcattttgatcccaaaattaataaaaatggcattttagtccctcacattttcctccgtt 44192465  T
Q  122 tgccaaataaat 133  Q
    || |||||||||    
T  44192464 tgtcaaataaat 44192453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 6030600 - 6030716
Alignment:
Q  19 ataggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctcc 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||| ||| |  |||||||||    
T  6030600 ataggcttattagatcgtttggtcccttatttaatttcatgttttcattttagtcccacaattaataaaattggcgttttagttccttattttttcctcc 6030699  T
Q  119 gtttgccaaataaatcc 135  Q
    |||||||||||||||||    
T  6030700 gtttgccaaataaatcc 6030716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 23 - 134
Target Start/End: Original strand, 34468957 - 34469068
Alignment:
Q  23 gcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||| |||||||||||||||| ||||| || ||||    
T  34468957 gcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcgcacaattaataaaaatgacgttttagtccctcacattttcttctgttt 34469056  T
Q  123 gccaaataaatc 134  Q
    ||||||||||||    
T  34469057 gccaaataaatc 34469068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 1085504 - 1085394
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||| ||||||||  ||||||||||||    
T  1085504 ggcttattagattgtttggtcccttatttaatttcatgttttcattttggtaccacatttaataaaattggcgttttggtccctca--ttttcctccgtt 1085407  T
Q  122 tgccaaataaatc 134  Q
    |||||||||||||    
T  1085406 tgccaaataaatc 1085394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 29220994 - 29220881
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||| ||||||||||| || |||||||| |||    
T  29220994 ggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacaattaataaaaatggctttttagtcccttacattttcctctgtt 29220895  T
Q  122 tgccaaataaatcc 135  Q
    |||||||| |||||    
T  29220894 tgccaaattaatcc 29220881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 29334293 - 29334180
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||| ||||||||||| || |||||||| |||    
T  29334293 ggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacaattaataaaaatggctttttagtcccttacattttcctctgtt 29334194  T
Q  122 tgccaaataaatcc 135  Q
    |||||||| |||||    
T  29334193 tgccaaattaatcc 29334180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 23 - 135
Target Start/End: Original strand, 18615515 - 18615627
Alignment:
Q  23 gcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgttt 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| || |||| |||||||||||||| ||||||||||  || |||||||||||||    
T  18615515 gcttattagatcgtttggtcccttatttaatttcatattttcattttggtctcacaattaataaaaatggctttttagtcccctacattttcctccgttt 18615614  T
Q  123 gccaaataaatcc 135  Q
    |||||||||||||    
T  18615615 gccaaataaatcc 18615627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 41 - 200
Target Start/End: Original strand, 43033099 - 43033257
Alignment:
Q  41 tcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggc 140  Q
    |||||||  |||||||| |||||||||||| ||||||| |||||||||    | |||| ||||||||| ||||||||||||||||||||||||||| |      
T  43033099 tcccttaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcactttttcctccgtttgccaaataaatcctcga- 43033197  T
Q  141 tgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccataaac 200  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||| || |||||||||    
T  43033198 tgttaagtttaacctcaaatgtctatggtagaccaaccttaagagtggtccaccataaac 43033257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 22 - 177
Target Start/End: Complemental strand, 6032432 - 6032277
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    |||||||||||||||||| ||| ||||| ||||||||||||| |||||| | ||||| ||||||||||||| |||||||||||  |  |||||||| |||    
T  6032432 ggcttattagatcgtttgatcctttattcaatttcatgtttttattttggttccacaattaataaaaatggtgttttagtcccgtattttttcctctgtt 6032333  T
Q  122 tgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaac 177  Q
    |||||||||||||| || | ||||| ||||||  |||||||||||||| |||||||    
T  6032332 tgccaaataaatccatgaccgttaactttaacttcaaatgtctatggttgaccaac 6032277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 22 - 181
Target Start/End: Original strand, 44191134 - 44191294
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    ||||||| ||||  ||||||||||||||||||||||||||||||||||  ||||||| ||||||||||| || ||||||||||||| | ||||| | |||    
T  44191134 ggcttataagattatttggtcccttatttaatttcatgttttcattttagtcccacaattaataaaaattgcattttagtccctcatcgtttccactgtt 44191233  T
Q  122 tgccaaataaatccttggctgttaagtttaaccc-caaatgtctatggtggaccaacctta 181  Q
    || ||||||||||| || ||||| |||||||||| ||||| | ||| |||||| |||||||    
T  44191234 tgtcaaataaatccctgcctgtttagtttaaccctcaaatatatatagtggacaaacctta 44191294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 37 - 182
Target Start/End: Original strand, 11315946 - 11316090
Alignment:
Q  37 ttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcct 136  Q
    |||||||| ||  |||||||| |||||||||||| ||||||| |||||||||    ||||| |||||||||  ||||||||||||||||||||||||||     
T  11315946 ttggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcaggttttcctccgtttgccaaataaatccc 11316045  T
Q  137 tggctgttaagtttaaccccaaatgtctatggtggaccaaccttaa 182  Q
     |||||||||||||||  |||||||||||||||||| |||||||||    
T  11316046 -ggctgttaagtttaattccaaatgtctatggtggatcaaccttaa 11316090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 197
Target Start/End: Complemental strand, 12359800 - 12359622
Alignment:
Q  19 ataggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctcc 118  Q
    ||||||||||||||||   | ||||||||  ||||||||||||||| ||||  ||||||| ||||||||| ||||||||| ||||||||  |||||||      
T  12359800 ataggcttattagatcaccttgtcccttaaataatttcatgttttcgttttagtcccacaattaataaaattggcgttttggtccctcattttttccttt 12359701  T
Q  119 gtttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||| ||||||||||||| | |||||||| |||||||  || ||||||||||||| ||| | |||||||| || ||||||    
T  12359700 gttcgccaaataaatccgtagctgttaactttaaccttaagtgtctatggtggatcaatcgtaagagtgatccaccata 12359622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 22 - 197
Target Start/End: Original strand, 17459251 - 17459428
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    |||||||| ||||  || ||||||||  |||||||| |||||||||||| || |||| |||||||||    ||||| |||||||||| ||||||||||||    
T  17459251 ggcttatttgatccattagtcccttaaataatttcaagttttcattttggtcacacaattaataaaacgtacgtttaagtccctcactttttcctccgtt 17459350  T
Q  122 tgccaaataaatccttggctgttaagtttaaccccaa---atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||||||||||| | || || ||||||||||||||||   ||||||||||||||| || ||||| |||| |||| ||||    
T  17459351 tgccaaataaattc-tgacttttaagtttaaccccaaatgatgtctatggtggacgaatcttaaaagtgatctaacata 17459428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 43034561 - 43034413
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||||| ||||||||||| ||| |||| |||||||||    | |||| ||||||||| |||||||||||||| ||||||||| ||| |||||||||||    
T  43034561 taatttcaagttttcattttaatctcacaattaataaaacgtaccttttggtccctcactttttcctccgtttgtcaaataaat-cttcgctgttaagtt 43034463  T
Q  150 taac--cccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||  | ||||||||||||||||| |||| ||||||||| || ||||||    
T  43034462 taacctctcaaatgtctatggtggatcaactttaagagtggtccaccata 43034413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 50 - 182
Target Start/End: Complemental strand, 32470665 - 32470534
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||||| ||||| |||||| ||||||| |||||||||    ||||| ||| |||||  |||||||||||||| |||||||||||  ||||||||||||    
T  32470665 taatttcaagtttttattttggtcccacaattaataaaacgtacgtttaagttcctcatgttttcctccgtttgtcaaataaatccc-ggctgttaagtt 32470567  T
Q  150 taaccccaaatgtctatggtggaccaaccttaa 182  Q
    |||| ||||||||||||||||||  ||||||||    
T  32470566 taactccaaatgtctatggtggataaaccttaa 32470534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 49 - 192
Target Start/End: Complemental strand, 17460775 - 17460633
Alignment:
Q  49 ttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagt 148  Q
    ||||||||| |||||||||||||||||||| |||||||||    |||||| ||||||||  ||||||||||||| ||||||||||||  | | ||||| |    
T  17460775 ttaatttcaagttttcattttgatcccacaattaataaaacgtacgttttggtccctcaaattttcctccgtttcccaaataaatcc-cgaccgttaact 17460677  T
Q  149 ttaaccccaaatgtctatggtggaccaaccttaagagtgctcta 192  Q
    |||||   |||||||||||||||||||| ||||| |||| ||||    
T  17460676 ttaactttaaatgtctatggtggaccaatcttaaaagtggtcta 17460633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 35903506 - 35903651
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    |||||| ||| || |||||||| ||| ||||||||| |||||||||||| ||||| |  |||||||| |   ||||| ||||||||  | |  ||||||     
T  35903506 ggcttaataggtcatttggtcctttaattaatttcaagttttcattttggtcccataactaataaaagtcatgttttggtccctcaattatatctccgtc 35903605  T
Q  122 tgccaaataaatccttggctgttaagtttaaccccaaatgtctatg 167  Q
     | |||||||||||||||||||||||||||||||||||||||||||    
T  35903606 agtcaaataaatccttggctgttaagtttaaccccaaatgtctatg 35903651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 249022 - 249137
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    ||||||||||||| ||||||||||||  | ||||| | ||||||||||| ||||| |||||||||||||| ||  || ||||||||  |||| ||| |||    
T  249022 ggcttattagatcatttggtcccttaagttatttcttattttcattttggtcccatatttaataaaaatgtcgaattggtccctcaaattttgctctgtt 249121  T
Q  122 tgccaaataaatcctt 137  Q
    ||||||| ||||||||    
T  249122 tgccaaaaaaatcctt 249137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 28562899 - 28562773
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    ||||||||  ||||||||||| ||||| | |||||||||    | |||| ||||||||| |||||||||||||| |||||||||||  | ||||||||||    
T  28562899 taatttcaaattttcattttggtcccataattaataaaacataccttttggtccctcactttttcctccgtttgtcaaataaatcc-agactgttaagtt 28562801  T
Q  150 taaccccaaatgtctatggtggaccaac 177  Q
    ||| ||||||| | ||||||||||||||    
T  28562800 taatcccaaatatatatggtggaccaac 28562773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 11317458 - 11317310
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    ||||||||  ||||||||||| ||||||| |||||||||      |||| ||||||||  |||||||||||||| ||||||||||||   | ||||||||    
T  11317458 taatttcaaattttcattttggtcccacaattaataaaacatatattttggtccctcaatttttcctccgtttggcaaataaatcctca-cagttaagtt 11317360  T
Q  150 taaccccaa--atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||| | ||  ||||||||||| ||||||||||||||||| |||||||||    
T  11317359 taactcaaatgatgtctatggtagaccaaccttaagagtggtctaccata 11317310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 38 - 173
Target Start/End: Original strand, 28561382 - 28561518
Alignment:
Q  38 tggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaa-tcct 136  Q
    ||||||||||  |||||| | |||||||||||| || |||| |||||||||      |||| ||||||||||||||||| |||||| |||||||| || |    
T  28561382 tggtcccttaaataattttaagttttcattttggtctcacaattaataaaacgtatcttttggtccctcaccttttcctacgtttgtcaaataaattctt 28561481  T
Q  137 tggctgttaagtttaaccccaaatgtctatggtggac 173  Q
    || ||||||||||||| | ||||| ||||||||||||    
T  28561482 tgactgttaagtttaatctcaaatatctatggtggac 28561518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 125 - 197
Target Start/End: Original strand, 34464069 - 34464141
Alignment:
Q  125 caaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||||||||  || ||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||    
T  34464069 caaataaatctctgactgttaagtttaaccccaaatgtctatcgttgaccaaccttaagagtggtccaccata 34464141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 125 - 200
Target Start/End: Original strand, 34467607 - 34467682
Alignment:
Q  125 caaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccataaac 200  Q
    ||||||||||| |||||||| ||||||||  |||||||||||| ||||| ||||||||||||| || |||||||||    
T  34467607 caaataaatccctggctgttgagtttaacttcaaatgtctatgatggacaaaccttaagagtggtccaccataaac 34467682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 6030560 - 6030412
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||| | |||||||||||||||||||| ||||| ||||   ||||||  ||| |||  ||||||||  ||||||||||||||| |   | ||||| ||    
T  6030560 taatttgaagttttcattttgatcccacaattaattaaaagtacgttttgatccttcatattttcctctatttgccaaataaatc-tcaacagttaactt 6030462  T
Q  150 taaccccaa--atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||||| ||  ||||||| ||||||||||||||||||||| |||||||||    
T  6030461 taacccaaatgatgtctacggtggaccaaccttaagagtgatctaccata 6030412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 37 - 197
Target Start/End: Original strand, 11547672 - 11547834
Alignment:
Q  37 ttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcct 136  Q
    ||||||| |||  |||||||| |||||||||||| || || | |||||||||     ||||||  ||||||  ||||||| |||||| ||||||||||||    
T  11547672 ttggtcctttaaataatttcaagttttcattttggtctcataattaataaaacacatgttttaacccctcattttttccttcgtttgtcaaataaatcct 11547771  T
Q  137 tggctgttaagtttaaccccaa---atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
     | |||||||||||||||||||   ||||||||  ||||||||||||| ||||| || ||||||    
T  11547772 -gactgttaagtttaaccccaaatgatgtctatcatggaccaaccttaggagtggtccaccata 11547834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 177
Target Start/End: Original strand, 34147132 - 34147289
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||||||| ||| || |||||||||| |  ||||||   |||||||||||| ||||| |  |||||||| |   ||||| ||||||||  ||  ||||||    
T  34147132 taggcttaataggtcatttggtccctcaaataattttcagttttcattttggtcccataagtaataaaactcatgttttggtccctcaagttcacctccg 34147231  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaac 177  Q
       | ||||||||||| ||| |||||| ||||||||||||||||||||||||||||||    
T  34147232 ccagtcaaataaatccatgggtgttaactttaaccccaaatgtctatggtggaccaac 34147289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 177
Target Start/End: Original strand, 21664816 - 21664955
Alignment:
Q  37 ttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcct 136  Q
    ||||||| ||| ||||||||| |||||||||||| || |||| || |||||| |   |||||||||  |||  ||||||||| ||||  ||||||||       
T  21664816 ttggtcctttaattaatttcaagttttcattttggtcacacaattcataaaatttctgttttagtct-tcattttttcctccatttgttaaataaatttc 21664914  T
Q  137 tggctgttaagtttaaccccaaatgtctatggtggaccaac 177  Q
    || ||||||||||||||  ||||||||||||||||||||||    
T  21664915 tgactgttaagtttaacttcaaatgtctatggtggaccaac 21664955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 187
Target Start/End: Original strand, 32469174 - 32469313
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatgg--cgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaag 147  Q
    |||||||| |||||||||||||||||||| |||||||||   |  | |||| |||| |||| |||||||||| |||||||||||||||||    ||||||    
T  32469174 taatttcaagttttcattttgatcccacaattaataaaacgtgtaccttttggtccttcactttttcctccg-ttgccaaataaatcctt-atagttaag 32469271  T
Q  148 tttaaccccaa--atgtctatggtggaccaaccttaagagtg 187  Q
    |||||| | ||  |||| |||||||||||||| |||||||||    
T  32469272 tttaactcaaattatgtatatggtggaccaactttaagagtg 32469313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 197
Target Start/End: Complemental strand, 34513579 - 34513496
Alignment:
Q  114 cctccgtttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||||||| | ||||||| ||| |||  |||||| |||||||||||||| |||||| ||||||||||||||||| || ||||||    
T  34513579 cctccgttagtcaaataattccctggtcgttaagcttaaccccaaatgtatatggttgaccaaccttaagagtgatccaccata 34513496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 177
Target Start/End: Complemental strand, 2277573 - 2277432
Alignment:
Q  36 tttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcc 135  Q
    |||||||||| |  |||||||  |||||||||||| ||||| |  |||||||| |   ||||| ||||||||  ||  |||| ||  | |||||||||||    
T  2277573 tttggtccctcaaataatttccagttttcattttggtcccataagtaataaaacttatgttttggtccctcaagttcacctcagtcggtcaaataaatcc 2277474  T
Q  136 ttggctgttaagtttaaccccaaatgtctatggtggaccaac 177  Q
     |||  ||||| ||||||||||||||||||||||||||||||    
T  2277473 atgggagttaactttaaccccaaatgtctatggtggaccaac 2277432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 36 - 197
Target Start/End: Original strand, 34512826 - 34512985
Alignment:
Q  36 tttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcc 135  Q
    ||||||||| || |||||| |  |||||||||||| ||||| | ||||||||| |   |||||  |||||||  ||| |||||||| | ||||||||| |    
T  34512826 tttggtcccctaattaattaccagttttcattttggtcccataattaataaaactcatgttttgatccctcaaatttgcctccgttagtcaaataaat-c 34512924  T
Q  136 ttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
     || ||||||||||||| ||  ||||| ||||||||| ||||| |||||||| || ||||||    
T  34512925 atgactgttaagtttaa-ccttaatgtatatggtggatcaaccataagagtggtccaccata 34512985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 197
Target Start/End: Complemental strand, 42641885 - 42641803
Alignment:
Q  116 tccgtttgccaaataaatccttggctgttaagtttaaccccaa--atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||||||||||||||||||||   |  ||||||| ||||| ||  ||||||||||||| ||||||||||||||| |||||||||    
T  42641885 tccgtttgccaaataaatcctca-caattaagttcaacccaaatgatgtctatggtgggccaaccttaagagtggtctaccata 42641803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 30749323 - 30749278
Alignment:
Q  141 tgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
    |||||||||||||| ||||||||||||||  ||||||||||||||||    
T  30749323 tgttaagtttaacctcaaatgtctatggt-aaccaaccttaagagtg 30749278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 134
Target Start/End: Complemental strand, 36011721 - 36011648
Alignment:
Q  61 tttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatc 134  Q
    ||||||||| |||||| | |||||||||    |||||||||||||||  ||||  |||||||||||||||||||    
T  36011721 tttcattttaatcccataattaataaaatgtacgttttagtccctcattttttaatccgtttgccaaataaatc 36011648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 2e-53; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 22 - 197
Target Start/End: Original strand, 22335977 - 22336153
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||    
T  22335977 ggcttattagatcttttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctcagtt 22336076  T
Q  122 tgccaaataaatccttggctgttaagtttaaccccaaatg--tctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||||||||||||  |  |||||||||||||||||||||   |||||||||| ||||||||| |||| || ||||||    
T  22336077 tgccaaataaatcc-cgaatgttaagtttaaccccaaatgatgctatggtggatcaaccttaaaagtggtccaccata 22336153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 24 - 187
Target Start/End: Original strand, 11501180 - 11501342
Alignment:
Q  24 cttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttg 123  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||| ||||||| ||||||||||| || |||||||||||||||||||||||| ||||    
T  11501180 cttattagatcgtttggtcctttaattaatttcatgttttcattttggtcccacagttaataaaaatagcattttagtccctcaccttttcctccatttg 11501279  T
Q  124 ccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
    ||||||||||||  | ||||||| ||||||  ||||||||||||||||||||||||||| ||||    
T  11501280 ccaaataaatcc-cgactgttaactttaacttcaaatgtctatggtggaccaaccttaaaagtg 11501342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 22 - 182
Target Start/End: Complemental strand, 22538966 - 22538807
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  22538966 ggcttattagatcgtttggtcccttatttaatttcatgttttctttttggtcccacaattaataaaaatgacgttttagtccctcatcttttcctccgtt 22538867  T
Q  122 tgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaa 182  Q
    |||||||||||| || | | ||||| |||||| |||||| ||||||||| |||||| ||||    
T  22538866 tgccaaataaat-ctcgacggttaactttaactccaaatatctatggtgtaccaacattaa 22538807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 21 - 197
Target Start/End: Complemental strand, 13564358 - 13564181
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    |||||||||||||| ||| ||||||||||||||||| ||||||||||||| ||||||| ||||||||| ||||||||||||||||||| |||||||||||    
T  13564358 aggcttattagatcatttagtcccttatttaatttcttgttttcattttggtcccacaattaataaaactggcgttttagtccctcacattttcctccgt 13564259  T
Q  121 ttgccaaataaatccttggctgttaagtttaacccca---aatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||||||||||||||   |  ||||||||||||||||   ||||||||||||||| || ||||||||||| || ||||||    
T  13564258 ttgccaaataaatcc--cgacgttaagtttaaccccaaataatgtctatggtggatcatccttaagagtggtccaccata 13564181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 21 - 182
Target Start/End: Complemental strand, 22337489 - 22337330
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||  || ||||||| || |||||||||||    
T  22337489 aggcttattagattgtttggtcccttatttagtttcatgttttcattttgatcccacaattaataaaaatggc-attcagtcccttacattttcctccgt 22337391  T
Q  121 ttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaa 182  Q
    ||||||||||||||| || | ||||| ||||||  |||||||||||||||||||||||||||    
T  22337390 ttgccaaataaatcc-tgaccgttaaatttaacttcaaatgtctatggtggaccaaccttaa 22337330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 22 - 235
Target Start/End: Original strand, 3413530 - 3413742
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    ||||||||||||||||||||||  ||  ||||||| ||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||| ||| |||    
T  3413530 ggcttattagatcgtttggtcctctaaataatttcgtgttttcattttggtcctacaattaataaaaatggcgttttagtccctcaccttttactctgtt 3413629  T
Q  122 tgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccataaacatcattaannnnnnnaaattt 221  Q
    |||||||||||||| |  ||||||||||||||  || |||||||||||||| ||| |||||||||  || |||||| || |||||||       ||||||    
T  3413630 tgccaaataaatccctaactgttaagtttaacttcagatgtctatggtggatcaatcttaagagttgtccaccatagacttcattaa-ttttttaaattt 3413728  T
Q  222 taaccgtttgatct 235  Q
    ||||||||||||||    
T  3413729 taaccgtttgatct 3413742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 21 - 197
Target Start/End: Complemental strand, 11502541 - 11502363
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    ||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||| ||||| ||| ||    
T  11502541 aggcttattagatcgtttggtcctttaactaatttcatgttttcattttgatcccacatttaataaaaattgcgaattagtccctcaacttttgctctgt 11502442  T
Q  121 ttgccaaataaatccttggctgttaagtttaaccccaa---atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||||||||||||||    | ||||||||||||| |||   ||||||||||| ||||||||||||||||| || ||||||    
T  11502441 ttgccaaataaatcc-caacagttaagtttaacctcaaatgatgtctatggtagaccaaccttaagagtggtccaccata 11502363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 19 - 187
Target Start/End: Original strand, 13562817 - 13562984
Alignment:
Q  19 ataggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctcc 118  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| |||||| |||||||  |||||||||||||||||||||||||||| |||| |||     
T  13562817 ataggcttattagatcgtttagtcccttatttaatttcttgtttttattttggtcccacaagtaataaaaatggcgttttagtccctcacatttttctct 13562916  T
Q  119 gtttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
    |||| ||||||||||||  |  |||||| ||||||  |||||||||||  |||||||||||||| ||||    
T  13562917 gtttaccaaataaatcc-cgattgttaactttaacttcaaatgtctataatggaccaaccttaaaagtg 13562984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 50 - 311
Target Start/End: Complemental strand, 4300138 - 4299877
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||||| |||||||||||| ||||||| |||||||||    ||||| |||||||||| |||||||| |||||||||||||||| || | |||||||||    
T  4300138 taatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcactttttcctctgtttgccaaataaatctttcggtgttaagtt 4300039  T
Q  150 taaccccaaatgtctatggtggaccaaccttaagagtgctctaccataaacatcattaannnnnnnaaattttaaccgtttgatctttt-nnnnnnnggc 248  Q
    |||||||||| |||||| ||||| ||||||||||||||  | |||||| || |||||||       ||||||| |||||||||||||||         ||    
T  4300038 taaccccaaacgtctatagtggatcaaccttaagagtggcccaccatagacttcattaa-ttttttaaattttgaccgtttgatcttttaaaaaacaagc 4299940  T
Q  249 taccattggattctgaatgactactttatcttacaatgatccaacaacaactaccattggatt 311  Q
    ||||||| |||| |||| |||||||||||| |||||| ||||  ||||||| |||||||||||    
T  4299939 taccattagattatgaaggactactttatcctacaatcatcctccaacaacaaccattggatt 4299877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 50 - 208
Target Start/End: Complemental strand, 40509824 - 40509666
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||||| |||||||||||| ||||||| |||||||||    ||||| ||| |||||| ||||||||||||| ||||||||||| || | |||||||||    
T  40509824 taatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagttcctcactttttcctccgtttaccaaataaatcattcggtgttaagtt 40509725  T
Q  150 taaccccaaatgtctatggtggaccaaccttaagagtgctctaccataaacatcattaa 208  Q
    ||||||||||||||||| |||||||||||||||||||| || |||||| || |||||||    
T  40509724 taaccccaaatgtctatagtggaccaaccttaagagtggtccaccatagacttcattaa 40509666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 50 - 208
Target Start/End: Complemental strand, 22115254 - 22115096
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||||| |||||||||||| ||||||| |||||||||    ||||| ||| |||||| ||||||||||||  ||||||||||| || | |||||||||    
T  22115254 taatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagttcctcactttttcctccgttnaccaaataaatcnttcggtgttaagtt 22115155  T
Q  150 taaccccaaatgtctatggtggaccaaccttaagagtgctctaccataaacatcattaa 208  Q
    ||||||||||||||||| |||||||||||||||||||| || |||||| || |||||||    
T  22115154 taaccccaaatgtctatagtggaccaaccttaagagtggtccaccatagacttcattaa 22115096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 50 - 182
Target Start/End: Original strand, 43459481 - 43459612
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||||| |||||||||||| ||||||| |||||||||   |||||| |||||||||  |||||||||||||||||||||||| || ||||||||||||    
T  43459481 taatttcaagttttcattttggtcccacaattaataaaacgtgcgtttaagtccctcatgttttcctccgtttgccaaataaat-ctcggctgttaagtt 43459579  T
Q  150 taaccccaaatgtctatggtggaccaaccttaa 182  Q
    |||| |||||||||||||||||| |||||||||    
T  43459580 taactccaaatgtctatggtggatcaaccttaa 43459612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 33779204 - 33779040
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||||||||| ||||  || ||||| ||  |||||||| ||||||||||||  |||||| ||||||||| |  |||||||||||||| | ||||||||||    
T  33779204 taggcttatttgatccattagtcccctaaataatttcaagttttcattttggccccacaattaataaaactcacgttttagtccctcgctttttcctccg 33779105  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
        || |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33779104 c---cccaataaatctttggctgttaagtttaaccacaaatgtctatggtggaccaaccttaagagtg 33779040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 50 - 186
Target Start/End: Original strand, 40508404 - 40508540
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||||| |||||||||||  ||||||| |||||||||    ||||| |||||||||| |||||||||||| ||||||||||||||| | |||||||||    
T  40508404 taatttcaagttttcatttttgtcccacaattaataaaacgtacgtttaagtccctcactttttcctccgttagccaaataaatccttcggtgttaagtt 40508503  T
Q  150 taaccccaaatgtctatggtggaccaaccttaagagt 186  Q
    ||| ||||||||||||||||||| ||| |||||||||    
T  40508504 taatcccaaatgtctatggtggatcaatcttaagagt 40508540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 3414952 - 3414837
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    ||||||||||| ||||| ||||| ||  ||||||||||||||||||||| ||||| | |||||||||||||||||||||||| |||| ||||||||| ||    
T  3414952 ggcttattagaacgtttagtcccctaaataatttcatgttttcattttggtcccataattaataaaaatggcgttttagtccttcactttttcctccatt 3414853  T
Q  122 tgccaaataaatcctt 137  Q
    ||||||||||||||||    
T  3414852 tgccaaataaatcctt 3414837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 24283065 - 24282939
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    ||||||||  ||||||||||| | ||||| |||| ||| | |||| ||||||||||||| |||||||||||||||||||||||||| ||| |||||| ||    
T  24283065 taatttcagattttcattttggttccacaattaaaaaaca-ggcgctttagtccctcacattttcctccgtttgccaaataaatccatgggtgttaactt 24282967  T
Q  150 taaccccaaatgtctatggtggaccaac 177  Q
    ||||||||||||||||||||||| ||||    
T  24282966 taaccccaaatgtctatggtggatcaac 24282939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 163
Target Start/End: Original strand, 24844257 - 24844399
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||| ||||| ||||| ||| ||||||||||||||| ||||||| |||||  | | ||| |||||| |||||||||||||||||||||| ||||| ||||    
T  24844257 taggtttattggatcgattgatcccttatttaattttatgtttttatttttgttctacaattaatacaaatggcgttttagtccctcacattttcttccg 24844356  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaaatgtc 163  Q
    |||||||||||||||| |  ||||||||||||||| ||||||||    
T  24844357 tttgccaaataaatcc-tcactgttaagtttaacctcaaatgtc 24844399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 20 - 208
Target Start/End: Original strand, 4298709 - 4298897
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||||||||| ||||   ||||||| ||  |||||| | ||||| |||||||||||||| |||||||||   | |||| |||||||||| |||||||| |    
T  4298709 taggcttatttgatccaatggtcccctaaataattttaagtttttattttgatcccacaattaataaaatgtgggtttaagtccctcactttttcctctg 4298808  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccataaacatcattaa 208  Q
    ||||||||||||||| || | ||||||||||||||| ||| || ||||||||| ||| | |||||||  || |||||| || |||||||    
T  4298809 tttgccaaataaatcatttgatgttaagtttaaccctaaacgtgtatggtggatcaatcctaagagttgtccaccatagacttcattaa 4298897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 22537555 - 22537670
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||||||||||||||||||| ||||||||||||||| || ||||||||||| ||||||| ||| |||||||| | ||||  |||||||| |||  ||| |    
T  22537555 taggcttattagatcgtttgctcccttatttaattttatattttcattttggtcccacaattactaaaaatgacattttgatccctcacgtttgtctctg 22537654  T
Q  120 tttgccaaataaatcc 135  Q
    ||||||||||||||||    
T  22537655 tttgccaaataaatcc 22537670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 38 - 186
Target Start/End: Original strand, 47059122 - 47059271
Alignment:
Q  38 tggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcctt 137  Q
    ||||||| || ||||||| | |||||||||||| ||| ||| |||||||||    ||||||  |||||||| |||||||||||||||||||||||||| |    
T  47059122 tggtcccctaattaattttaagttttcattttggtcctacaattaataaaatgtacgttttgatccctcactttttcctccgtttgccaaataaatcc-t 47059220  T
Q  138 ggctgttaagtttaacc--ccaaatgtctatggtggaccaaccttaagagt 186  Q
    | | |||||||||||||  ||||| |||||||||||| |||||||||||||    
T  47059221 gaccgttaagtttaaccctccaaaagtctatggtggagcaaccttaagagt 47059271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 40738957 - 40738843
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaa-tggcgttttagtccctcaccttttcctccgt 120  Q
    ||||||||||||||||||||||| ||   ||||||||||||| |||||| ||||| | ||||||||||  |||||||||||||||||| |||| ||| ||    
T  40738957 ggcttattagatcgtttggtcccctaaacaatttcatgtttttattttggtcccataattaataaaaacaggcgttttagtccctcactttttgctctgt 40738858  T
Q  121 ttgccaaataaatcc 135  Q
    |||||||||||||||    
T  40738857 ttgccaaataaatcc 40738843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 22 - 187
Target Start/End: Complemental strand, 40812731 - 40812567
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| | ||| | |||||||||    ||||||  |||||||  |||||||| |||    
T  40812731 ggcttattagatcgtttgatcccttatttaatttcatgttttcattttggttccataattaataaaacgtacgttttgctccctcatattttcctctgtt 40812632  T
Q  122 tgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
    || |||||| ||||  | ||||| | |||||| ||||||  | |||||||||||||||||| ||||    
T  40812631 tgtcaaatatatcc-cgactgtttactttaactccaaataaccatggtggaccaaccttaaaagtg 40812567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 197
Target Start/End: Original strand, 32254987 - 32255164
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    ||||||||| ||| |||||||||| |  ||||||||  |||| |||||| ||||| | |||||||||    | ||||  |||||||| ||||||||||||    
T  32254987 ggcttattaaatcatttggtccctcaaataatttcaaatttttattttggtcccataattaataaaacgtacattttgatccctcactttttcctccgtt 32255086  T
Q  122 tgccaaataaatccttggctgttaagtttaaccccaa---atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||||||||||||  | | |||||||||||||||||   |||| |||||||||||||||||||||||| || ||||||    
T  32255087 tgccaaataaatcc-cgacggttaagtttaaccccaaatgatgtttatggtggaccaaccttaagagtggtccaccata 32255164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 173
Target Start/End: Original strand, 30310115 - 30310270
Alignment:
Q  18 aataggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctc 117  Q
    |||||||||||| ||||   | ||||||||  |||||||| |||||||||||  ||||||| |||||||||    | ||| ||| |||||  ||||||||    
T  30310115 aataggcttatttgatccaatagtcccttaaataatttcaagttttcatttttgtcccacaattaataaaacgtacatttgagttcctcattttttcctc 30310214  T
Q  118 cgtttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggac 173  Q
    ||||||||||||||||||  | |||||||  |||||||||||||||||||||||||    
T  30310215 cgtttgccaaataaatcccagactgttaaagttaaccccaaatgtctatggtggac 30310270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 38 - 177
Target Start/End: Complemental strand, 45455474 - 45455336
Alignment:
Q  38 tggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcctt 137  Q
    |||||||||| |||||||||  ||||||||||| ||||||| |||||||||    | ||||  |||||||| |||| ||||||||||||||||||| | |    
T  45455474 tggtcccttaattaatttcaaattttcattttggtcccacaattaataaaacgtacattttgatccctcacttttttctccgtttgccaaataaat-cat 45455376  T
Q  138 ggctgttaagtttaaccccaaatgtctatggtggaccaac 177  Q
    |||||||||||||||||| ||||| |||| ||| ||||||    
T  45455375 ggctgttaagtttaaccctaaatgcctatagtgtaccaac 45455336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 49 - 184
Target Start/End: Complemental strand, 47060566 - 47060432
Alignment:
Q  49 ttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagt 148  Q
    ||||||| | |||||||||||| ||| | | |||||||||    |||||| |||||||||| |||  ||||||||||||||||||||  | |||||||||    
T  47060566 ttaattttaagttttcattttggtcctataattaataaaacgtacgttttggtccctcacccttttttccgtttgccaaataaatccg-gactgttaagt 47060468  T
Q  149 ttaaccccaaatgtctatggtggaccaaccttaaga 184  Q
    ||||| |||||||| |||||||||||||||||||||    
T  47060467 ttaacaccaaatgtatatggtggaccaaccttaaga 47060432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 59 - 197
Target Start/End: Complemental strand, 43460904 - 43460765
Alignment:
Q  59 gttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtttaaccccaa 158  Q
    |||||||||||| ||||||| |||||||||    | |||||||||||||| ||||||||| |||||||||||||||| |  | |||||||||||| | ||    
T  43460904 gttttcattttggtcccacaattaataaaacgtacattttagtccctcactttttcctccatttgccaaataaatcc-tcacagttaagtttaactcaaa 43460806  T
Q  159 --atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
      ||||||||||||||||||| ||||||||| || ||||||    
T  43460805 ttatgtctatggtggaccaactttaagagtggtccaccata 43460765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 38 - 143
Target Start/End: Original strand, 45454052 - 45454157
Alignment:
Q  38 tggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcctt 137  Q
    ||||||| || ||||||||| |||||||||||| || || | |||||||||    |||||||||||||||| |||||||||||||||||||||||||||     
T  45454052 tggtcccctaattaatttcacgttttcattttggtctcataattaataaaacatacgttttagtccctcactttttcctccgtttgccaaataaatcctg 45454151  T
Q  138 ggctgt 143  Q
    ||||||    
T  45454152 ggctgt 45454157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 123 - 197
Target Start/End: Original strand, 46201230 - 46201304
Alignment:
Q  123 gccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||||||||||||  | ||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||    
T  46201230 gccaaataaatccaagcctgttaagtttaaccccaaatgtctatggtgaaccaaccttaagagtggtccaccata 46201304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 24844457 - 24844399
Alignment:
Q  33 tcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatg 91  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  24844457 tcgtttgatcccttatttaatttcatgttttcattttgatcctacaattaataaaaatg 24844399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 11344533 - 11344657
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||||| |||||||||||| ||||||| |||||||||    ||||| ||||| |||   ||| ||||||||| |||||||||| || | |||||||||    
T  11344533 taatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccttca---ttttctccgtttgtcaaataaatctttcggtgttaagtt 11344629  T
Q  150 taaccccaaatgtctatggtggaccaac 177  Q
    ||||| ||||| |||||||||| |||||    
T  11344630 taacctcaaatatctatggtggtccaac 11344657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 50 - 187
Target Start/End: Original strand, 47454363 - 47454499
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||||| | |||||||||| ||||||| |||||||||    | |||| ||||||||  |||| || ||||||||||||||||||  | || |||| ||    
T  47454363 taatttcaagctttcattttggtcccacaattaataaaacgtacattttggtccctcaagtttttcttcgtttgccaaataaatccc-gactattaactt 47454461  T
Q  150 taaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
    |||| | ||||||||||||| |||||||||||||||||    
T  47454462 taactctaaatgtctatggtagaccaaccttaagagtg 47454499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 6173570 - 6173405
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||||||||| ||||   |||||||| |  |||||||| ||||||||||||  |||| | |||||||||    | |||| ||||||||| ||||||||||    
T  6173570 taggcttatttgatccaatggtccctcaaataatttcaagttttcattttgtacccataattaataaaacgtacattttggtccctcactttttcctccg 6173471  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
    |||||||||||||||| |  || |||| |||||| | |||| ||||| |||||||||| |||| ||||    
T  6173470 tttgccaaataaatccat--ctattaactttaactctaaatatctatagtggaccaactttaaaagtg 6173405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 32602929 - 32603043
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||||||||| ||||  ||||||| | |  |||||||| ||||| |||||| ||||| | |||||||||    |||||||||||||||| |||| |||||    
T  32602929 taggcttatttgatccattggtccttcaaataatttcaagtttttattttggtcccataattaataaaacgtacgttttagtccctcactttttactccg 32603028  T
Q  120 tttgccaaataaatc 134  Q
    |||||||||||||||    
T  32603029 tttgccaaataaatc 32603043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 187
Target Start/End: Complemental strand, 32256485 - 32256349
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||||| |||||||||||| ||||| | |||||||||    | |||| ||||||||| ||||||||| |||||||||||||| |    | ||||| ||    
T  32256485 taatttcaagttttcattttggtcccataattaataaaatgtaccttttggtccctcactttttcctccatttgccaaataaattc-caaccgttaactt 32256387  T
Q  150 taaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
    ||||  |||||||||||||||||||||| |||| ||||    
T  32256386 taacttcaaatgtctatggtggaccaacattaaaagtg 32256349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 33096865 - 33096981
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||||||||| ||||   |||||||| |  |||||||| ||| |||||||   |||||| ||||||||| |  | |||| ||||||||| ||||||||||    
T  33096865 taggcttatttgatccaatggtccctcaaataatttcaagttctcattttaggcccacaattaataaaacttaccttttggtccctcactttttcctccg 33096964  T
Q  120 tttgccaaataaatcct 136  Q
    |||||||||||||||||    
T  33096965 tttgccaaataaatcct 33096981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 140 - 187
Target Start/End: Original strand, 15992251 - 15992298
Alignment:
Q  140 ctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  15992251 ctgttaactttaacctcaaatgtctatggtggaccaaccttaagagtg 15992298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 135
Target Start/End: Original strand, 24281075 - 24281186
Alignment:
Q  25 ttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaa-tggcgttttagtccctcaccttttcctccgtttg 123  Q
    |||||||||| |||| |||  ||  |||||||||||||| |||||| ||||||| ||||||||||   ||||||||||||||||  ||||  |||||| |    
T  24281075 ttattagatcatttgatcctctaaataatttcatgtttttattttggtcccacaattaataaaaacaagcgttttagtccctcaattttttatccgttcg 24281174  T
Q  124 ccaaataaatcc 135  Q
    ||||||||||||    
T  24281175 ccaaataaatcc 24281186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 95 - 198
Target Start/End: Original strand, 43441417 - 43441520
Alignment:
Q  95 ttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctacc 194  Q
    |||| |||||||| | ||| |||||||   |||| | ||||||| | ||||| |||||||| |||||||||||||| |||||||||||||||| || |||    
T  43441417 ttttggtccctcagcgtttgctccgttaatcaaaaagatccttgacggttaactttaaccctaaatgtctatggtgtaccaaccttaagagtggtccacc 43441516  T
Q  195 ataa 198  Q
    ||||    
T  43441517 ataa 43441520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 534165 - 534099
Alignment:
Q  41 tcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctca 107  Q
    ||||||| |||||||||| ||||||||||| || |||||||||||||||||| |  |||||||||||    
T  534165 tcccttaattaatttcatcttttcattttggtctcacatttaataaaaatggtgaattagtccctca 534099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 537331 - 537397
Alignment:
Q  41 tcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctca 107  Q
    ||||||| |||||||||| ||||||||||| || |||||||||||||||||| |  |||||||||||    
T  537331 tcccttaattaatttcatcttttcattttggtctcacatttaataaaaatggtgaattagtccctca 537397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 187
Target Start/End: Complemental strand, 41079956 - 41079789
Alignment:
Q  18 aataggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctc 117  Q
    |||||| |||||| |||  ||||||||| | ||||||||   |||| |||||| ||||||| | |||||||    |||||| |||||| | |||||||||    
T  41079956 aataggtttattatatccattggtccctcaattaatttccattttttattttggtcccacaat-aataaaacgtacgttttggtcccttatcttttcctc 41079858  T
Q  118 cgtttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
    ||||||| |||||||||| |  | ||||| |||||| |||||| ||||||||||| |||| |||| ||||    
T  41079857 cgtttgctaaataaatccct-accgttaactttaactccaaatatctatggtggaacaacattaaaagtg 41079789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 35295817 - 35295872
Alignment:
Q  142 gttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||| ||||||||||||| ||| |||||||||||||||||||||| || ||||||    
T  35295817 gttaactttaaccccaaatatctgtggtggaccaaccttaagagtggtccaccata 35295872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 40811397 - 40811494
Alignment:
Q  101 tccctcaccttttcctccgtttgccaaataaatccttggctgttaagtttaaccccaa--atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||||||  ||||||||||| | | ||||||||||| | | ||||| |||||||| ||  ||||||||||||||||||||||||||||| || ||||||    
T  40811397 tccctcatattttcctccgtatactaaataaatcct-gacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccata 40811494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 16755983 - 16756044
Alignment:
Q  136 ttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||||||||| ||||||| ||||||||||||||| | ||||||||| |||  |||||||||    
T  16755983 ttggctgttaactttaacctcaaatgtctatggtgaaacaaccttaaaagttgtctaccata 16756044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 134
Target Start/End: Complemental strand, 47456494 - 47456381
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    ||||||||| ||||   |||||||| |  |||||||| |||||||||||| ||||||| |||||||||    | |||| ||||||||  ||||| || ||    
T  47456494 aggcttatttgatccaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtactttttggtccctcattttttcttctgt 47456395  T
Q  121 ttgccaaataaatc 134  Q
    ||||||||||||||    
T  47456394 ttgccaaataaatc 47456381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 2414863 - 2414918
Alignment:
Q  142 gttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||| |||||||||||||||||||  |||||||||||||| |||| || ||||||    
T  2414863 gttaactttaaccccaaatgtctataatggaccaaccttaaaagtggtccaccata 2414918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 35664401 - 35664287
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||||||||||||||  ||| ||||||| ||||||||   ||||||||||||||||| |  |||||||||   | |||| |||||| |  |||  |||||    
T  35664401 taggcttattagatccattgatcccttaattaatttccatttttcattttgatcccataagtaataaaaaataccttttggtcccttagttttatctccg 35664302  T
Q  120 tttgccaaataaatc 134  Q
    ||||||||| |||||    
T  35664301 tttgccaaaaaaatc 35664287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 38539666 - 38539723
Alignment:
Q  19 ataggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatccca 76  Q
    ||||||||| ||| || |||| ||||||| ||||||||| |||||||||||| |||||    
T  38539666 ataggcttaataggtcatttgatcccttaattaatttcaagttttcattttggtccca 38539723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 1e-51; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 13116326 - 13116492
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| |||| ||||||||||    
T  13116326 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaagtggcgttttagtccttcacattttcctccg 13116425  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
    ||||||||||||||||  | ||||||| |||||| ||||||||||||  | |||||| ||| ||||||    
T  13116426 tttgccaaataaatcc-cgactgttaactttaactccaaatgtctataatagaccaatcttcagagtg 13116492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 21 - 160
Target Start/End: Complemental strand, 17339668 - 17339530
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||| |||||||||||||| |||||||||||||| |||||||||||    
T  17339668 aggcttattagatcgtttggtcccttatttaatttcatattttcattttggtccaacaattaataaaaatggcattttagtccctcacgttttcctccgt 17339569  T
Q  121 ttgccaaataaatccttggctgttaagtttaaccccaaat 160  Q
    ||||||||||||||| || |||||||||||||| ||||||    
T  17339568 ttgccaaataaatcc-tgactgttaagtttaactccaaat 17339530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 21 - 171
Target Start/End: Original strand, 17338038 - 17338187
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||| ||||||    
T  17338038 aggcttattaaatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacatttttctccgt 17338137  T
Q  121 ttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtgg 171  Q
    |||||||||||||| ||  |||| || ||||||| ||||||||||| ||||    
T  17338138 ttgccaaataaatcgtt-tctgtcaactttaacctcaaatgtctattgtgg 17338187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 20 - 197
Target Start/End: Original strand, 42098559 - 42098737
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||  |||| ||| |||  |||||    
T  42098559 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaagtggcgttttgatcccccacgtttgtctccg 42098658  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaa---atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||||||||||||||  | ||||||| |||||||||||   |||||| ||||||||||||||||| |||| || ||||||    
T  42098659 tttgccaaataaatcc--gactgttaattttaaccccaaatgatgtctttggtggaccaaccttaaaagtggtccaccata 42098737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 42100226 - 42100060
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| || |||| |||||||||||||||||||  |||||||  ||||||||||    
T  42100226 taggcttattagatcgtttgatcccttatttaatttcatgttttcattttggtctcacaattaataaaaatggcgttttgatccctcatattttcctccg 42100127  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
    |||||||||||| |||  | ||||||| ||||||  ||||||||| ||||||||||||||||| ||||    
T  42100126 tttgccaaataattcc-cgactgttaactttaacttcaaatgtctttggtggaccaaccttaaaagtg 42100060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 21 - 135
Target Start/End: Complemental strand, 13117752 - 13117638
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||| |||||||| ||    
T  13117752 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcccataattaataaaaatggcgttttagtccctcacattttcctctgt 13117653  T
Q  121 ttgccaaataaatcc 135  Q
    |||||||||||||||    
T  13117652 ttgccaaataaatcc 13117638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 42872311 - 42872133
Alignment:
Q  18 aataggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctc 117  Q
    |||||||||||| ||||   ||||||||||  |||||| | ||||||||||| ||| || | | |||||||    ||||||||||| |||| ||||||||    
T  42872311 aataggcttatttgatccaatggtcccttaaataattttaagttttcattttaatctcataatgaataaaacgtacgttttagtccttcactttttcctc 42872212  T
Q  118 cgtttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||||| |||||||||||| | | ||||| ||||||| |||||||||||||| ||||||||||||||||| |||||||||    
T  42872211 cgtttgtcaaataaatcct-gacggttaactttaacctcaaatgtctatggtagaccaaccttaagagtggtctaccata 42872133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 50 - 200
Target Start/End: Original strand, 22551033 - 22551182
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||||| ||||| |||||| ||||||| |||||||||      |||| ||||||||| ||||| ||| ||||||||||||||||| |  |||||||||    
T  22551033 taatttcaagtttttattttggtcccacaattaataaaacgtatcttttggtccctcactttttc-tccatttgccaaataaatcctggattgttaagtt 22551131  T
Q  150 taaccccaaatgtctatggtggaccaaccttaagagtgctctaccataaac 200  Q
    ||||||||||| |||||||||||| |||||||| |||| || |||||||||    
T  22551132 taaccccaaatctctatggtggacaaaccttaaaagtgatccaccataaac 22551182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 23 - 135
Target Start/End: Original strand, 211594 - 211706
Alignment:
Q  23 gcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgttt 122  Q
    |||||||||||| |||| |||||||  ||||||||||||||||||||| ||||||| |||||||||  | ||||||||||||| |  |||| ||||||||    
T  211594 gcttattagatcatttgatcccttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgttt 211693  T
Q  123 gccaaataaatcc 135  Q
     ||||||||||||    
T  211694 accaaataaatcc 211706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 23 - 135
Target Start/End: Complemental strand, 240662 - 240550
Alignment:
Q  23 gcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgttt 122  Q
    |||||||||||| |||| |||||||  ||||||||||||||||||||| ||||||| |||||||||  | ||||||||||||| |  |||| ||||||||    
T  240662 gcttattagatcatttgatcccttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgttt 240563  T
Q  123 gccaaataaatcc 135  Q
     ||||||||||||    
T  240562 accaaataaatcc 240550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 23 - 135
Target Start/End: Original strand, 725217 - 725329
Alignment:
Q  23 gcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgttt 122  Q
    |||||||||||| |||| |||||||  ||||||||||||||||||||| ||||||| |||||||||  | ||||||||||||| |  |||| ||||||||    
T  725217 gcttattagatcatttgatcccttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgttt 725316  T
Q  123 gccaaataaatcc 135  Q
     ||||||||||||    
T  725317 accaaataaatcc 725329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 23 - 135
Target Start/End: Complemental strand, 794017 - 793905
Alignment:
Q  23 gcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgttt 122  Q
    |||||||||||| |||| |||||||  ||||||||||||||||||||| ||||||| |||||||||  | ||||||||||||| |  |||| ||||||||    
T  794017 gcttattagatcatttgatcccttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgttt 793918  T
Q  123 gccaaataaatcc 135  Q
     ||||||||||||    
T  793917 accaaataaatcc 793905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 22 - 182
Target Start/End: Original strand, 32797136 - 32797298
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    |||||||| ||||  |||||||||||  |||||||| |||||||||||| ||||||| |||||||||    ||||| |||||||||  ||||||||||||    
T  32797136 ggcttatttgatctattggtcccttaaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcaggttttcctccgtt 32797235  T
Q  122 tgccaaata--aatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaa 182  Q
    | |||||||  ||  |  ||| |||||||||||| ||||||||||||| |||| |||||||||    
T  32797236 taccaaataataaatcgcggccgttaagtttaactccaaatgtctatgatggatcaaccttaa 32797298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 168
Target Start/End: Complemental strand, 212802 - 212684
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    ||||||||  ||||||||||  ||||||| |||| ||||  || ||||||||||||||| ||||||| |||||| ||||||||||  ||| |||||| ||    
T  212802 taatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtttgtcaaataaatctatgggtgttaactt 212703  T
Q  150 taaccccaaatgtctatgg 168  Q
    |||||||||||||||||||    
T  212702 taaccccaaatgtctatgg 212684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 168
Target Start/End: Original strand, 239452 - 239570
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    ||||||||  ||||||||||  ||||||| |||| ||||  || ||||||||||||||| ||||||| |||||| ||||||||||  ||| |||||| ||    
T  239452 taatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtttgtcaaataaatctatgggtgttaactt 239551  T
Q  150 taaccccaaatgtctatgg 168  Q
    |||||||||||||||||||    
T  239552 taaccccaaatgtctatgg 239570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 168
Target Start/End: Complemental strand, 726425 - 726307
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    ||||||||  ||||||||||  ||||||| |||| ||||  || ||||||||||||||| ||||||| |||||| ||||||||||  ||| |||||| ||    
T  726425 taatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtttgtcaaataaatctatgggtgttaactt 726326  T
Q  150 taaccccaaatgtctatgg 168  Q
    |||||||||||||||||||    
T  726325 taaccccaaatgtctatgg 726307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 168
Target Start/End: Original strand, 792807 - 792925
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    ||||||||  ||||||||||  ||||||| |||| ||||  || ||||||||||||||| ||||||| |||||| ||||||||||  ||| |||||| ||    
T  792807 taatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtttgtcaaataaatctatgggtgttaactt 792906  T
Q  150 taaccccaaatgtctatgg 168  Q
    |||||||||||||||||||    
T  792907 taaccccaaatgtctatgg 792925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 168
Target Start/End: Complemental strand, 798926 - 798808
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    ||||||||  ||||||||||  ||||||| |||| ||||  || ||||||||||||||| ||||||| |||||| ||||||||||  ||| |||||| ||    
T  798926 taatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtttgtcaaataaatctatgggtgttaactt 798827  T
Q  150 taaccccaaatgtctatgg 168  Q
    |||||||||||||||||||    
T  798826 taaccccaaatgtctatgg 798808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 28418802 - 28418916
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||||||| ||||||  |||||||||||  ||||||||  ||||||||||| ||||| | |||||||||    |||||||||||||||| ||||||||||    
T  28418802 taggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctccg 28418901  T
Q  120 tttgccaaataaatc 134  Q
    |||||||||||||||    
T  28418902 tttgccaaataaatc 28418916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 187
Target Start/End: Original strand, 42870839 - 42870978
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||||| |||||||||||| ||||||| |||||||||    ||||||||||||| || ||||| || ||||||| ||| ||||| || ||||||||||    
T  42870839 taatttcaagttttcattttggtcccacaattaataaaacgtacgttttagtcccttactttttcgtctgtttgccgaatgaatcc-tgactgttaagtt 42870937  T
Q  150 taaccccaa---atgtctatggtggaccaaccttaagagtg 187  Q
    |||||||||   |||||||| ||||||||| ||||||||||    
T  42870938 taaccccaaaagatgtctattgtggaccaatcttaagagtg 42870978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 32798622 - 32798474
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||||| |||||||||||| ||||||| |||||||||    | |||||||||||||  |||| ||||||||| ||||||||||||   | ||||||||    
T  32798622 taatttcaagttttcattttggtcccacaattaataaaacgtaccttttagtccctcaattttttctccgtttgtcaaataaatcctca-cggttaagtt 32798524  T
Q  150 taaccccaa--atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||| | ||  |||||||||||||| |||||||||||||| || ||||||    
T  32798523 taactcaaatgatgtctatggtggatcaaccttaagagtggtccaccata 32798474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 50 - 182
Target Start/End: Complemental strand, 8571707 - 8571574
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttgg-ctgttaagt 148  Q
    ||||||||  ||||||||||| ||  ||| |||||||||    |||||| |||| |||  |||| |||||||| |||||||||||| | | |||||||||    
T  8571707 taatttcacattttcattttggtcatacaattaataaaacgtacgttttggtccttcatttttttctccgtttaccaaataaatccctagtctgttaagt 8571608  T
Q  149 ttaaccccaaatgtctatggtggaccaaccttaa 182  Q
    ||||||||||||||||||||||||||||| ||||    
T  8571607 ttaaccccaaatgtctatggtggaccaactttaa 8571574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 197
Target Start/End: Original strand, 38696320 - 38696481
Alignment:
Q  36 tttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcc 135  Q
    ||||||||| || ||||||| | |||||||||||| || || |  |||||||| |   ||||| ||||||||  ||| |||||||  | |||||||||||    
T  38696320 tttggtcccctaattaattttaagttttcattttggtctcataactaataaaactcatgttttggtccctcaagtttgcctccgtcggtcaaataaatcc 38696419  T
Q  136 ttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
     | ||| ||||||||||||| ||||||||||||| |||||||||||| |||| || ||||||    
T  38696420 cttgctattaagtttaaccctaaatgtctatggtagaccaaccttaaaagtggtccaccata 38696481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 21 - 177
Target Start/End: Complemental strand, 45437601 - 45437445
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    ||||||| ||| || |||| |||| || ||||||||| |||||||||||||||||| | ||||||||| |   ||||| |||||||   ||| ||||||     
T  45437601 aggcttaataggtcatttgatcccctaattaatttcaagttttcattttgatcccataattaataaaactcatgttttggtccctcgtgtttgcctccgc 45437502  T
Q  121 ttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaac 177  Q
    | | ||||||||||| || ||||||||||||||||||||| | ||||| || |||||    
T  45437501 tagtcaaataaatccctgactgttaagtttaaccccaaatatttatggcgggccaac 45437445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 50 - 197
Target Start/End: Original strand, 6397809 - 6397955
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    ||||||||| ||||||||||| ||||||| ||||||||| |  | |||||||||||||  |||| ||||||||||||||||||| | ||  |||||| ||    
T  6397809 taatttcatattttcattttggtcccacaattaataaaacttacattttagtccctcatttttttctccgtttgccaaataaat-catgaatgttaaatt 6397907  T
Q  150 taaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||| ||||||  |||||||  ||||||||| | |||| || ||||||    
T  6397908 taactccaaataactatggtaaaccaacctttacagtggtccaccata 6397955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 38 - 137
Target Start/End: Original strand, 26696546 - 26696645
Alignment:
Q  38 tggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcctt 137  Q
    ||||||| || ||||||||| |||||||||||| ||||||| |||||||||    | |||| ||||||||| ||||||||| ||||||||||||||||||    
T  26696546 tggtcccctaattaatttcaagttttcattttggtcccacaattaataaaacatacattttggtccctcactttttcctccatttgccaaataaatcctt 26696645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 197
Target Start/End: Complemental strand, 32695395 - 32695216
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||||||||| |||   ||||||||| |  |||||||| |||||||||||| || |||| |||||||||    ||||| ||||| |||| |||||||| |    
T  32695395 taggcttatttgattcattggtccctcaaataatttcaagttttcattttggtctcacaattaataaaacgtacgtttaagtccttcacgttttcctctg 32695296  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaa---atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||||||||| | ||| || | |||||||||||||||||   |||||||||||| ||||| ||||||| || || ||||||    
T  32695295 tttgccaaattagtcc-tgaccgttaagtttaaccccaaatgatgtctatggtgaaccaatcttaagattggtccaccata 32695216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 134
Target Start/End: Complemental strand, 28420293 - 28420180
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    ||||||| ||||||  |||||||||||  ||||||||  ||||||||||| ||||| | |||||||||    |||||||||||||||  |||||||||||    
T  28420293 aggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccgt 28420194  T
Q  121 ttgccaaataaatc 134  Q
    ||| ||||||||||    
T  28420193 ttgtcaaataaatc 28420180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 10669452 - 10669388
Alignment:
Q  133 tccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||||||||||||| ||||||| ||||||||||||||| |||||||||||||||| || ||||||    
T  10669452 tccttggctgttaactttaacctcaaatgtctatggtgaaccaaccttaagagtggtccaccata 10669388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 24192670 - 24192606
Alignment:
Q  133 tccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||||| ||||||| |||||||| ||||||||||||||||||||||||||||||| || ||||||    
T  24192670 tccttgactgttaactttaaccctaaatgtctatggtggaccaaccttaagagtggtccaccata 24192606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 60 - 177
Target Start/End: Complemental strand, 26697912 - 26697796
Alignment:
Q  60 ttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtttaaccccaaa 159  Q
    ||||||||||  ||||| | |||||||||    |||||||||||||||| ||||| ||| |||| | ||||||||||    |||||||||||||||||||    
T  26697912 ttttcattttagtcccataattaataaaacgtacgttttagtccctcactttttcttccttttgtcgaataaatcctaat-tgttaagtttaaccccaaa 26697814  T
Q  160 tgtctatggtggaccaac 177  Q
    ||| ||||||||||||||    
T  26697813 tgtttatggtggaccaac 26697796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 197
Target Start/End: Original strand, 42877631 - 42877791
Alignment:
Q  36 tttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcc 135  Q
    ||||||| |||| ||||||||| |||||||||||| || || |  |||||||| |   ||||| ||||||||| |||  || |||  | |||||||||||    
T  42877631 tttggtctcttaattaatttcaagttttcattttggtctcataactaataaaactcatgttttggtccctcacgtttgtcttcgtcagtcaaataaatcc 42877730  T
Q  136 ttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
      | | ||||| ||||||||||||||| ||||||||||||||||||||| || || ||||||    
T  42877731 c-gacggttaactttaaccccaaatgtgtatggtggaccaaccttaagaatggtccaccata 42877791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 60 - 160
Target Start/End: Complemental strand, 6398577 - 6398478
Alignment:
Q  60 ttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtttaaccccaaa 159  Q
    ||||||||||| || || | |||||||||   ||||||||||||||||  |||||||||||||| ||||||||| | || |||||||||||||||| |||    
T  6398577 ttttcattttggtctcataattaataaaacaagcgttttagtccctcattttttcctccgtttgtcaaataaat-catgactgttaagtttaaccctaaa 6398479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 45281278 - 45281129
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||||| |||||||||||| ||| ||| |||||||||||   |||||  ||| |||  ||||||||| ||||||||||||||||    | ||||| ||    
T  45281278 taatttcaagttttcattttggtccaacaattaataaaaatat-gttttgatccttcagattttcctccatttgccaaataaatcccaa-cagttaactt 45281181  T
Q  150 taaccccaa--atgtctatggtggaccaaccttaagagtgctctaccataaa 199  Q
    ||| || ||  ||||||| ||||||||||||||||||||| |||||||||||    
T  45281180 taatccaaatgatgtctacggtggaccaaccttaagagtggtctaccataaa 45281129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 135
Target Start/End: Original strand, 8570132 - 8570229
Alignment:
Q  38 tggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcc 135  Q
    ||||||| || ||||||||| |||||||||||| ||| ||| |||||||||    |||||| ||||||||| |||  ||| |||||||||||||||||    
T  8570132 tggtcccctaattaatttcacgttttcattttggtcctacaattaataaaacgtacgttttggtccctcacttttgtctctgtttgccaaataaatcc 8570229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 137
Target Start/End: Complemental strand, 23708868 - 23708752
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    ||||||||||||||  |||||||| ||  ||||||  | ||||||||||| ||||| ||||||||||| |||||  |||||||||||  | ||   ||||    
T  23708868 aggcttattagatccattggtcccctaactaatttgttattttcattttggtcccatatttaataaaagtggcgaattagtccctcaaatattgagccgt 23708769  T
Q  121 ttgccaaataaatcctt 137  Q
    |||||||| ||||||||    
T  23708768 ttgccaaaaaaatcctt 23708752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 182
Target Start/End: Complemental strand, 30787690 - 30787559
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||| | |||||||||||| ||||| | |||||||||      |||| ||||||||| ||||| |||||||||||||||||||| ||  |||||| ||    
T  30787690 taattttaagttttcattttggtcccataattaataaaatatatattttggtccctcactttttcttccgtttgccaaataaatcc-tgtatgttaactt 30787592  T
Q  150 taaccccaaatgtctatggtggaccaaccttaa 182  Q
    |||| | |||||| ||| |||||||||| ||||    
T  30787591 taactctaaatgtttatagtggaccaactttaa 30787559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 23702955 - 23703070
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    |||||||||||||  |||||||| ||  ||||||  | ||||||||||| ||||| ||||||||||| |||||  |||||||||||  | ||   |||||    
T  23702955 ggcttattagatccattggtcccctaactaatttgttattttcattttggtcccatatttaataaaagtggcgaattagtccctcaaatattgagccgtt 23703054  T
Q  122 tgccaaataaatcctt 137  Q
    ||||||| ||||||||    
T  23703055 tgccaaaaaaatcctt 23703070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 24305159 - 24305210
Alignment:
Q  141 tgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctcta 192  Q
    |||||| |||||||| ||||||||||||||||||||| ||||||||| ||||    
T  24305159 tgttaactttaaccctaaatgtctatggtggaccaacattaagagtgatcta 24305210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 199
Target Start/End: Complemental strand, 44076482 - 44076302
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    ||||||||| ||||   |||||||| |  ||||||||  |||| |||||| ||||||| |||||||||      |||| || |||||  |||||||||||    
T  44076482 aggcttatttgatccaatggtccctcaaataatttcaaatttttattttggtcccacaattaataaaacgtatcttttggtgcctcaatttttcctccgt 44076383  T
Q  121 ttgccaaataaatccttggctgttaagtttaaccccaa---atgtctatggtggaccaaccttaagagtgctctaccataaa 199  Q
    ||||||||||||||| |  | |||||||||||||||||   |||||||||||||| |||| |||| | || || ||||||||    
T  44076382 ttgccaaataaatccct-acagttaagtttaaccccaaatgatgtctatggtggaacaacattaaaaatgatccaccataaa 44076302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 14840896 - 14840842
Alignment:
Q  143 ttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||||||||||| |||||||||||||||||||||| |||| |||| || ||||||    
T  14840896 ttaagtttaaccacaaatgtctatggtggaccaacattaaaagtgatccaccata 14840842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 135
Target Start/End: Original strand, 32693855 - 32693941
Alignment:
Q  49 ttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcc 135  Q
    ||||||| | |||||||||||| ||||||| |||||||||    || ||| |||| |||  ||||||||||||||||||||||||||    
T  32693855 ttaattttaagttttcattttggtcccacaattaataaaacatacgctttggtccttcagattttcctccgtttgccaaataaatcc 32693941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 9854866 - 9854822
Alignment:
Q  153 ccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||||||||||||||||||||||| ||||||||| || ||||||    
T  9854866 ccccaaatgtctatggtggaccaactttaagagtggtccaccata 9854822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 31845792 - 31845738
Alignment:
Q  142 gttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||| ||||||||||||||||||||||| ||||| |||||||||| || ||||||    
T  31845792 gttaactttaaccccaaatgtctatggtgaaccaa-cttaagagtggtccaccata 31845738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 43202214 - 43202269
Alignment:
Q  142 gttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||| ||||||||||||| ||||| ||||| |||||||||||||| || ||||||    
T  43202214 gttaattttaaccccaaatatctatagtggatcaaccttaagagtggtccaccata 43202269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 45394972 - 45395031
Alignment:
Q  29 tagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaa 88  Q
    |||||| |||| ||||||| ||||||| | |||||||||||||||||| | |||||||||    
T  45394972 tagatcatttgatcccttaattaattttaagttttcattttgatcccataattaataaaa 45395031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 187
Target Start/End: Original strand, 41629785 - 41629870
Alignment:
Q  101 tccctcaccttttcctccgtttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
    |||||||  ||||| ||||||||||||||||||||  | | ||||| || ||| ||||| |||||||||| ||||||||||| ||||    
T  41629785 tccctcaagttttcttccgtttgccaaataaatcc-cgaccgttaacttgaactccaaaagtctatggtgaaccaaccttaaaagtg 41629870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 1e-51; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 21 - 311
Target Start/End: Original strand, 14470853 - 14471142
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    ||||||||| ||||   ||||||| ||  |||||||| |||||||||||| ||||||| |||||||||    || || |||||||||| ||||||| |||    
T  14470853 aggcttatttgatccaatggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtacggttaagtccctcactttttccttcgt 14470952  T
Q  121 ttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccataaacatcattaannnnnnnaaatt 220  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||| |||||||||||||||||||| || ||||||||| |||||||       |||||    
T  14470953 ttgccaaataaatccttcggtgttaagtttaaccccaaacgtctatagtggaccaaccttaagagtggtccaccataaacttcattaa-ttttttaaatt 14471051  T
Q  221 ttaaccgtttgatcttttnnnnnnnggctaccattggattctgaatgactactttatcttacaatgatccaacaacaactaccattggatt 311  Q
    || |||||||||||||||        ||||||||| |||| |||| |||||||||||| |||||| ||||  ||||||| |||||||||||    
T  14471052 ttgaccgtttgatcttttaaaaacaagctaccattagattatgaaggactactttatcctacaatcatcctccaacaacaaccattggatt 14471142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 15234159 - 15234046
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  15234159 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctccgtt 15234060  T
Q  122 tgccaaataaatcc 135  Q
    ||||||||||||||    
T  15234059 tgccaaataaatcc 15234046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 20 - 192
Target Start/End: Complemental strand, 49803015 - 49802844
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||| ||||| |||||    
T  49803015 taggcttgttagatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaaatgacgttttagtccctcatctttttctccg 49802916  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctcta 192  Q
    ||||||||||||||||  | | ||||| || ||| | |||||||||||||| ||||||||||| |||| ||||    
T  49802915 tttgccaaataaatcc-cgacggttaacttcaactctaaatgtctatggtgtaccaaccttaaaagtggtcta 49802844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 21 - 187
Target Start/End: Original strand, 16963831 - 16963996
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    ||||||||||||||||||||||  ||| |||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||| ||||||||||||    
T  16963831 aggcttattagatcgtttggtcttttaattaatttcatgttttcattttggtcccacaattaataaaaatggtgttttagtccctcatcttttcctccgt 16963930  T
Q  121 ttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
    ||||||||||||| | || ||||||| |||||| | |||||| |||| |||||||||||||| ||||    
T  16963931 ttgccaaataaatgc-tgactgttaactttaactctaaatgtttatgatggaccaaccttaaaagtg 16963996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 15232748 - 15232916
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||| |||||||| |    
T  15232748 taggcttattagatcatttggtcccttatttaatttcatgttttcattttggtcccataattaataaaaatggcgttttagtccctcacattttcctctg 15232847  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaa--atgtctatggtggaccaaccttaagagtg 187  Q
    |||||||||||||| | || | |||||||||||||| ||  |||| ||| |||||||||| |||| ||||    
T  15232848 tttgccaaataaat-catgaccgttaagtttaacccaaatgatgtatatagtggaccaactttaaaagtg 15232916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 41874091 - 41873875
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||||||||||||||  ||||||||| | ||||||||   ||||||| ||| || || | ||||||||||     |||| | || | | |||||||||||    
T  41874091 taggcttattagatccattggtccctcaattaatttccatttttcatcttggtctcataattaataaaaagtatcttttggccctttagcttttcctccg 41873992  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccataaacatcattaannnnnnnaaat 219  Q
    ||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| || |||||| || |||||||       ||||    
T  41873991 tttaccaaataaatccttggttgttaagtttaaccacaaatgtctatggtggaccaaccttaagagtggtccaccatagacttcattaa-ttttttaaat 41873893  T
Q  220 tttaaccgtttgatcttt 237  Q
    ||||||||||||||||||    
T  41873892 tttaaccgtttgatcttt 41873875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 49 - 187
Target Start/End: Complemental strand, 15072881 - 15072743
Alignment:
Q  49 ttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagt 148  Q
    ||||||||| |||||||||||| ||||||| |||||||||    | |||| |||||| |  |||||||||||||||||||||||||| || ||||||| |    
T  15072881 ttaatttcaagttttcattttggtcccacaattaataaaacgtacattttggtcccttattttttcctccgtttgccaaataaatccatgtctgttaact 15072782  T
Q  149 ttaaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  15072781 ttaacctcaaatgtctatggtggaccaacctaaagagtg 15072743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 49801613 - 49801752
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||||||| ||||||| ||||||||||||| |||||  |||||||| |||  ||| |    
T  49801613 taggcttattagatcatttggtcccttatttaattttatattttcattttggtcccacaattaataaaaatggtgttttgatccctcacgtttgtctctg 49801712  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaaatg 161  Q
    ||||||||||||||||  | ||||||| ||||||| ||||||    
T  49801713 tttgccaaataaatcc--gactgttaattttaacctcaaatg 49801752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 50 - 197
Target Start/End: Original strand, 16123313 - 16123460
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||| | |||||||||||| | ||||| ||||||||| |  |||||||||||||||  ||||| |||||||||||||||||||| ||| |||||||||    
T  16123313 taatttaaagttttcattttggttccacaattaataaaattcacgttttagtccctcattttttcttccgtttgccaaataaatccctggttgttaagtt 16123412  T
Q  150 taaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||| | |||||||||||||| ||||||| |||| |||| || ||||||    
T  16123413 taatctcaaatgtctatggtagaccaactttaaaagtgatccaccata 16123460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 50 - 208
Target Start/End: Complemental strand, 14477881 - 14477723
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||| | ||||||| |||||||||||| |||||||||    ||||| |||||||||| |||| ||||||||||||||||||||||| | |||||||||    
T  14477881 taattttaagttttcactttgatcccacaattaataaaacgtacgtttaagtccctcacttttttctccgtttgccaaataaatccttcgatgttaagtt 14477782  T
Q  150 taaccccaaatgtctatggtggaccaaccttaagagtgctctaccataaacatcattaa 208  Q
    |||| | ||||||||||||| || ||| |||||||||  || |||||| || |||||||    
T  14477781 taactctaaatgtctatggtagatcaatcttaagagttgtccaccatagacttcattaa 14477723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 35943537 - 35943390
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcct-tggctgttaagt 148  Q
    ||||||||  |||| |||||| ||||||| |||||||||    | |||| |||| |||| ||||||| ||||||||||||||||||  ||||||||||||    
T  35943537 taatttcaaatttttattttggtcccacaattaataaaacgtacattttggtcc-tcactttttccttcgtttgccaaataaatcccctggctgttaagt 35943439  T
Q  149 ttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||||| ||||||||||||||||||||||||||||||| || ||||||    
T  35943438 ttaaccctaaatgtctatggtggaccaaccttaagagtgatccaccata 35943390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 41872573 - 41872736
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    ||||||||| ||||   |||||||||  |||||||||  ||||||||||||||  ||| |||||||||    ||||| |||| ||||| |||||||||||    
T  41872573 aggcttatttgatctaatggtcccttgattaatttcaacttttcattttgatcatacaattaataaaacgtacgtttaagtctctcactttttcctccgt 41872672  T
Q  121 ttgccaaataaatccttggctgttaagtttaa-ccccaaatgtctatggtggaccaaccttaaga 184  Q
    |||||||||||||| |||| |||||||||||| |||||||||||||||||| ||||| |||||||    
T  41872673 ttgccaaataaatcattgg-tgttaagtttaacccccaaatgtctatggtgaaccaatcttaaga 41872736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 39 - 197
Target Start/End: Complemental strand, 16965228 - 16965068
Alignment:
Q  39 ggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttg 138  Q
    |||||||||||||||||| | ||||||||||| ||||||| |||||||||||| ||||||||||||| || ||||| |||||||  ||||||||| |  |    
T  16965228 ggtcccttatttaatttcttattttcattttggtcccacaattaataaaaatgacgttttagtcccttacattttcttccgtttatcaaataaattc-cg 16965130  T
Q  139 gctgttaagtttaaccccaa---atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
       |||||||||||||||||   |||| |||||||||||||| ||||||||| || ||||||    
T  16965129 atggttaagtttaaccccaaatgatgtatatggtggaccaactttaagagtggtccaccata 16965068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 45585099 - 45584950
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||||| |||||||||||| || |||| |||||||||    | |||| |||| |||| |||||||||||||||||||||||||| || | ||||||||    
T  45585099 taatttcaagttttcattttggtctcacaattaataaaacgtaccttttggtccttcactttttcctccgtttgccaaataaatcc-tgaccgttaagtt 45585001  T
Q  150 taaccccaa---atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||| |||||   ||||||||||||| ||||| |||||||||||| ||||||    
T  45585000 taaacccaaatgatgtctatggtggcccaactttaagagtgctccaccata 45584950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 24499777 - 24499619
Alignment:
Q  18 aataggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctc 117  Q
    |||||||||||| |||   |||||||| ||  |||||||| |||||||||||| || |||| ||||||||| |  |||||| ||||||||| ||||||||    
T  24499777 aataggcttatttgatttgttggtcccctaaataatttcaagttttcattttggtctcacaattaataaaactcacgttttggtccctcactttttcctc 24499678  T
Q  118 cgtttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaac 177  Q
    ||||| ||||||||||||  | |||| || ||||| | ||||||||||| ||||||||||    
T  24499677 cgtttaccaaataaatcc-ggtctgtcaactttaaactcaaatgtctattgtggaccaac 24499619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 72 - 187
Target Start/End: Complemental strand, 44999529 - 44999415
Alignment:
Q  72 tcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtgg 171  Q
    ||||||| ||||||||| ||||||||| |||| |||  |||||||| ||||||||||||||||| | |||||||| |||||||  |||||||||||||||    
T  44999529 tcccacaattaataaaattggcgttttcgtcc-tcattttttcctctgtttgccaaataaatccctagctgttaactttaaccttaaatgtctatggtgg 44999431  T
Q  172 accaaccttaagagtg 187  Q
    ||||| | ||||||||    
T  44999430 accaatcgtaagagtg 44999415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 49 - 187
Target Start/End: Original strand, 46467171 - 46467309
Alignment:
Q  49 ttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagt 148  Q
    ||||||||| |||||||||||| ||||| |  |||||||| |   ||||  ||||||||  ||| |||||||||| ||||||||||| | ||||||||||    
T  46467171 ttaatttcaagttttcattttggtcccataactaataaaactcatgtttcggtccctcaggtttgcctccgtttgtcaaataaatccctcgctgttaagt 46467270  T
Q  149 ttaaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
    ||||||  ||||||||||||||||||||| |||| ||||    
T  46467271 ttaaccataaatgtctatggtggaccaacattaaaagtg 46467309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 21 - 197
Target Start/End: Original strand, 23091348 - 23091525
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    ||||||||| ||||  |||||||| ||  ||||||||  ||||||||||| |   ||| |||||||||    |||||| ||| ||||| |||| ||||||    
T  23091348 aggcttatttgatctattggtcccctaactaatttcacattttcattttggttttacaattaataaaacgtacgttttggtcactcacttttttctccgt 23091447  T
Q  121 ttgccaaataaatccttgg-ctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||||||||||||| | | ||||||||||||| | |||||||||||||||||||||| |||| |||| || ||||||    
T  23091448 ttgccaaataaatccctagtctgttaagtttaatctcaaatgtctatggtggaccaactttaaaagtggtccaccata 23091525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 19 - 172
Target Start/End: Complemental strand, 46318738 - 46318585
Alignment:
Q  19 ataggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctcc 118  Q
    ||||||||| ||| || |||||||| ||| ||||||||| ||||| |||||  ||||| |  |||||||| |   ||||| ||||||||  | |  ||||    
T  46318738 ataggcttaataggtcatttggtcctttaattaatttcaagttttgatttttgtcccataactaataaaagtcatgttttggtccctcaattgtatctcc 46318639  T
Q  119 gtttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtgga 172  Q
    || || ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  46318638 gtctgtcaaataaatccttggctgttaagtttaaccccaaatgtctatgatgga 46318585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 37 - 173
Target Start/End: Complemental strand, 51042445 - 51042310
Alignment:
Q  37 ttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcct 136  Q
    ||||||||||| ||||||||   ||||||||||| ||||||| ||||||||| |  ||||||||||||||   |||| ||||||||||||||||||| |     
T  51042445 ttggtcccttaattaatttccaattttcattttggtcccacaattaataaaactcacgttttagtccctc-tttttttctccgtttgccaaataaattca 51042347  T
Q  137 tggctgttaagtttaaccccaaatgtctatggtggac 173  Q
    || | ||||||| ||||| |||||||||||| |||||    
T  51042346 tgaccgttaagtataacctcaaatgtctatgatggac 51042310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 22 - 177
Target Start/End: Complemental strand, 52628991 - 52628837
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    |||||||| ||||  | |||||||||  |||||||| ||||| |||||| ||||||| |||||||||    | |||| ||||||||  ||||||||||||    
T  52628991 ggcttatttgatctatcggtcccttaaataatttcaagttttaattttggtcccacaattaataaaacgtaccttttggtccctcattttttcctccgtt 52628892  T
Q  122 tgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaac 177  Q
    |||||||||||| ||   | ||||||||||||||||||| | || |||||||||||    
T  52628891 tgccaaataaat-ctcaaccgttaagtttaaccccaaatatgtaaggtggaccaac 52628837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 46468612 - 46468546
Alignment:
Q  246 ggctaccattggattctgaatgactactttatcttac-aatgatccaacaacaactaccattggatt 311  Q
    ||||||||||||||| |||| |||||||||||||||| |||||||||| ||||||||||||||||||    
T  46468612 ggctaccattggattatgaaggactactttatcttacaaatgatccaataacaactaccattggatt 46468546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 48097032 - 48096975
Alignment:
Q  140 ctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||    
T  48097032 ctgttaagtttaacctcaaatgtatatggtggaccaaccttaagagtggtctaccata 48096975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 95 - 187
Target Start/End: Complemental strand, 3617542 - 3617450
Alignment:
Q  95 ttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
    |||| |||||||| | ||| |||||||   |||| || |||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||    
T  3617542 ttttggtccctcaacgtttgctccgttattcaaaaaagtccttggctgttaactttaacctcaaatgtctatggtgaaccaaccttaagagtg 3617450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 15746766 - 15746709
Alignment:
Q  140 ctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||||||||||||  ||||||||||||||||||||| |||||||||| || ||||||    
T  15746766 ctgttaagtttaacttcaaatgtctatggtggaccaatcttaagagtggtccaccata 15746709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 311
Target Start/End: Complemental strand, 41873837 - 41873800
Alignment:
Q  274 ttatcttacaatgatccaacaacaactaccattggatt 311  Q
    ||||||||||||||||||||||||||||||||||||||    
T  41873837 ttatcttacaatgatccaacaacaactaccattggatt 41873800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 110 - 187
Target Start/End: Original strand, 46110368 - 46110444
Alignment:
Q  110 ttttcctccgtttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
    |||| |||||||||| ||||||||| | | ||||||| |||||| | |||| ||||||||||||||||||||||||||    
T  46110368 tttttctccgtttgctaaataaatc-tcgactgttaactttaactctaaatatctatggtggaccaaccttaagagtg 46110444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 137
Target Start/End: Complemental strand, 44278440 - 44278352
Alignment:
Q  49 ttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcctt 137  Q
    ||||||||| |||||||||||| ||||||  |||||||||    |||||| ||||||||  |||| |||||||||||||||| ||||||    
T  44278440 ttaatttcaagttttcattttggtcccacgattaataaaacgtacgttttggtccctcatttttttctccgtttgccaaatagatcctt 44278352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 15071338 - 15071453
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    ||||||||||  |||  |||||||| ||  |||||||| |||||||||||| || || | |||||||||     ||||| ||||||||| ||||||||||    
T  15071338 taggcttatttaatccattggtcccctaaataatttcaagttttcattttggtcacataattaataaaacgtatgttttggtccctcactttttcctccg 15071437  T
Q  120 tttgccaaataaatcc 135  Q
    ||| ||||||||||||    
T  15071438 tttaccaaataaatcc 15071453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 187
Target Start/End: Complemental strand, 50444788 - 50444651
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    ||||||||  ||||||||||  ||||||| |||||||||    | |||| ||||||||  |||||||||| |||||||||||||||    | ||||| ||    
T  50444788 taatttcaaattttcattttagtcccacaattaataaaacgtacattttggtccctcattttttcctccgattgccaaataaatcc-aaaccgttaactt 50444690  T
Q  150 taac-cccaaatgtctatggtggaccaaccttaagagtg 187  Q
    |||| || ||| ||||||| |||||||||||||||||||    
T  50444689 taactccaaaacgtctatgttggaccaaccttaagagtg 50444651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 148 - 197
Target Start/End: Complemental strand, 13147408 - 13147359
Alignment:
Q  148 tttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||| ||||||||||||||||||||||||||||| |||| || ||||||    
T  13147408 tttaatcccaaatgtctatggtggaccaaccttaatagtggtccaccata 13147359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 135
Target Start/End: Complemental strand, 46111590 - 46111493
Alignment:
Q  38 tggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcc 135  Q
    ||||||||||  |||||||| ||||| |||||| ||||||| |||||||||    | |||| || |||||  ||||||| ||||||||||||||||||    
T  46111590 tggtcccttaaataatttcaagtttttattttggtcccacaattaataaaacgtaccttttggttcctcattttttccttcgtttgccaaataaatcc 46111493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 34350228 - 34350286
Alignment:
Q  142 gttaagtttaaccccaaatg---tctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||||||||||||||||||   ||||||||||| |||||||||||||| || ||||||    
T  34350228 gttaagtttaaccccaaatgatgtctatggtggatcaaccttaagagtggtccaccata 34350286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 48527651 - 48527707
Alignment:
Q  141 tgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||||| |||||| ||||||||||||||| ||||||| ||||||||| || ||||||    
T  48527651 tgttaactttaactccaaatgtctatggtcgaccaactttaagagtggtccaccata 48527707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 154
Target Start/End: Original strand, 50442650 - 50442754
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||| ||||||| |||||| || |||| |||||||||    | ||||  | ||||||||||||||| ||||| |||||||||| ||| ||||||| ||    
T  50442650 taattttatgtttttattttggtctcacaattaataaaacgtacattttgattcctcaccttttcctctgtttgtcaaataaatctttgactgttaactt 50442749  T
Q  150 taacc 154  Q
    |||||    
T  50442750 taacc 50442754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 9226213 - 9226158
Alignment:
Q  142 gttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||| ||||||| ||||||||||||||||| ||||||||| |||| || ||||||    
T  9226213 gttaaatttaacctcaaatgtctatggtggatcaaccttaaaagtggtccaccata 9226158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 195
Target Start/End: Complemental strand, 18821723 - 18821684
Alignment:
Q  156 caaatgtctatggtggaccaaccttaagagtgctctacca 195  Q
    |||||||||||||||||| ||||||||||||| |||||||    
T  18821723 caaatgtctatggtggactaaccttaagagtggtctacca 18821684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 42244629 - 42244695
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaa 88  Q
    |||||| ||| || |||||||| ||| |||||||||  ||||||||||||||||| | |||||||||    
T  42244629 ggcttaataggtcatttggtcctttaattaatttcaaattttcattttgatcccataattaataaaa 42244695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 177
Target Start/End: Original strand, 44276158 - 44276274
Alignment:
Q  60 ttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtttaaccccaaa 159  Q
    ||||||||||| || || | |||||||||    ||||||  ||| |||| |||| ||| ||||| ||| |||||||| | ||||||||||||||| ||||    
T  44276158 ttttcattttggtctcataattaataaaacgtacgttttgatccttcacttttttctctgtttgtcaattaaatcct-gactgttaagtttaaccacaaa 44276256  T
Q  160 tgtctatggtggaccaac 177  Q
    ||  ||||||||||||||    
T  44276257 tgcgtatggtggaccaac 44276274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 172
Target Start/End: Original strand, 26286488 - 26286560
Alignment:
Q  100 gtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtgga 172  Q
    |||||||| | ||| ||||||| | |||| |  ||| |||||||||| ||||||||||||||| |||||||||    
T  26286488 gtccctcaacgtttgctccgttagtcaaaaaggtccctggctgttaactttaaccccaaatgtttatggtgga 26286560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 34352056 - 34351968
Alignment:
Q  40 gtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaa 128  Q
    ||||||||  |||||| | |||||||||||| ||||||| |||||||||    | |||| ||||||||| ||||||| |||||| ||||    
T  34352056 gtcccttaaataattttaagttttcattttggtcccacaattaataaaatgtaccttttggtccctcactttttcctacgtttgtcaaa 34351968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 52627512 - 52627580
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaa 89  Q
    ||||||||| ||||   |||||||| |  |||||||| |||||||||||| ||||||| ||||||||||    
T  52627512 aggcttatttgatccaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaaa 52627580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 7e-50; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 20 - 176
Target Start/End: Original strand, 27837916 - 27838070
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||    
T  27837916 taggtttattagatcgtttgatcccttatttaatttcatgttttcattttggtcccacaattaataaatatggcgttttagtccctcaccttttcctccg 27838015  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaa 176  Q
    |||||||||||||||| || |||||||  |||||  |||||||||||||| ||||||    
T  27838016 tttgccaaataaatcc-tgactgttaa-cttaacttcaaatgtctatggtagaccaa 27838070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 21 - 197
Target Start/End: Complemental strand, 53614392 - 53614215
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||| ||||||||| ||||||||||||||||||| ||||||||  |    
T  53614392 aggcttattagatcgtttggtcccttatttaatttcttgtttttattttggtcccacaattaataaaactggcgttttagtccctcacattttcctctat 53614293  T
Q  121 ttgccaaataaatccttggctgttaagtttaacccca---aatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||||||||||||||  ||| ||||||||||||||||   ||||||||||||||| || ||||||||||| || ||||||    
T  53614292 ttgccaaataaatcc-aggc-gttaagtttaaccccaaataatgtctatggtggatcatccttaagagtggtccaccata 53614215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 18 - 197
Target Start/End: Original strand, 35370907 - 35371081
Alignment:
Q  18 aataggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||    
T  35370907 aataggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacaattaataaaaatggtgttttagtccttcaccttttcctc 35371006  T
Q  118 cgtttgccaaataaatccttggctgttaagtttaaccccaa--atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
     ||||| ||||||       | | |||||||||| ||| ||  |||| |||||||||||||||||||||||| || ||||||    
T  35371007 tgtttgtcaaata-------gacggttaagtttagcccaaatgatgtttatggtggaccaaccttaagagtggtccaccata 35371081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 20 - 192
Target Start/End: Complemental strand, 26887675 - 26887504
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||  |||||||||||| ||||||||| |    
T  26887675 taggcttattagatcgtttggtcccttatttaatttcatgttttcatttttgtcccacaattaataaaaatggcaatttagtccctcatcttttcctctg 26887576  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctcta 192  Q
    ||| |||||||||| | || | ||||| ||||||  ||||| ||||||||| ||||||||||| |||| ||||    
T  26887575 tttcccaaataaattc-tgacggttaactttaacttcaaatatctatggtgtaccaaccttaaaagtggtcta 26887504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 22 - 185
Target Start/End: Complemental strand, 10732247 - 10732083
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    |||||||||||||||||| |||||||||||||||  ||||||||||||| ||||| | ||||||||||||||||||||||||||||| ||||||||||||    
T  10732247 ggcttattagatcgtttgatcccttatttaatttattgttttcattttggtcccataattaataaaaatggcgttttagtccctcacattttcctccgtt 10732148  T
Q  122 tgccaaataaatccttggctgttaagtttaaccccaa--atgtctatggtggaccaaccttaagag 185  Q
    | |||||||||| |  | | |||||||||||||| ||  |||||||||||||||||||||| ||||    
T  10732147 taccaaataaattc-cgacggttaagtttaacccaaatgatgtctatggtggaccaacctttagag 10732083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 41264771 - 41264659
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||  ||||||||||||| |||||||    
T  41264771 ggcttattagattgtttggtcccttatttaatttcatgttttcattttggtctcacatttaataaaaatggcgttttgatccctcacctttttctccgtt 41264672  T
Q  122 tgccaaataaatc 134  Q
    |||||||||||||    
T  41264671 tgccaaataaatc 41264659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 35372279 - 35372124
Alignment:
Q  22 ggcttattagatcgtttggtccc---ttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctcc 118  Q
    |||||||||||||||||||||||   || ||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||     
T  35372279 ggcttattagatcgtttggtccccccttttttaatttcatgttttcattttggtctcacaattaataaaaatggcgttttagtccctcaccttttcctct 35372180  T
Q  119 gtttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaa 176  Q
    |||||||||||||||||||  |||||||  |||||  |||||||||||| ||||||||    
T  35372179 gtttgccaaataaatcctt-actgttaa-cttaacttcaaatgtctatgttggaccaa 35372124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 20 - 197
Target Start/End: Original strand, 10730881 - 10731057
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||||||||| ||||||||| ||||||||| |||||| ||||||||||||| ||||| | |||||||||||||| |||| |||| |||| |||| |||||    
T  10730881 taggcttattggatcgtttgatcccttattcaatttcttgttttcattttggtcccataattaataaaaatggcattttggtccttcacttttttctccg 10730980  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||||||||||||||  | ||||||| ||||||  ||||||||||||||| ||||||||||| |||| |||| ||||    
T  10730981 tttgccaaataaatcc-cgactgttaactttaacttcaaatgtctatggtgaaccaaccttaaaagtggtctatcata 10731057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 19 - 192
Target Start/End: Original strand, 41263633 - 41263805
Alignment:
Q  19 ataggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctcc 118  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||| |||| |||| ||| ||||| ||||    
T  41263633 ataggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacatttattaaaaatggcattttggtccgtcatctttttctcc 41263732  T
Q  119 gtttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctcta 192  Q
    ||||| ||| |||||||   | |||||| |||||| | |||| ||||||||||| ||||||||| |||| ||||    
T  41263733 gtttgtcaattaaatcccaag-tgttaactttaactctaaatatctatggtggatcaaccttaaaagtggtcta 41263805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 22 - 187
Target Start/End: Original strand, 53612869 - 53613033
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    ||||||||||| |||||  |||||||||||||||| ||||||||||||| ||||| | |||||||||||||||||||| |||||||| |||||||| |||    
T  53612869 ggcttattagaacgtttaatcccttatttaatttcttgttttcattttggtcccataattaataaaaatggcgttttattccctcacattttcctctgtt 53612968  T
Q  122 tgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
    ||||||||||||||  | | ||||| ||||||  |||||||||||| || |||||| |||| ||||    
T  53612969 tgccaaataaatcc-cgaccgttaactttaacttcaaatgtctatgatgaaccaactttaaaagtg 53613033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 50 - 200
Target Start/End: Original strand, 42684902 - 42685052
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||| | |||||||||||| | ||| | | ||||||| || |||||||||||||||  |||| ||  |||| ||||||||||||||| ||||||||||    
T  42684902 taattttaagttttcattttggttccataatgaataaaactgacgttttagtccctcatttttttctatgtttaccaaataaatccttgactgttaagtt 42685001  T
Q  150 taaccccaaatgtctatggtggaccaaccttaagagtgctctaccataaac 200  Q
    ||||||||||||||||||||| ||||| |||||||||| || |||||||||    
T  42685002 taaccccaaatgtctatggtgaaccaagcttaagagtggtccaccataaac 42685052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 21 - 199
Target Start/End: Original strand, 26886269 - 26886448
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||| ||  ||| ||||||||||||| |||||  |||||||| |||  ||| ||    
T  26886269 aggcttattagattgtttggtcccttatttaatttcatattttcattttggtctaacaattaataaaaatggtgttttgatccctcacgtttgtctctgt 26886368  T
Q  121 ttgccaaataaatccttggctgttaagtttaaccccaa---atgtctatggtggaccaaccttaagagtgctctaccataaa 199  Q
    |||||||||||||||  | ||||||| || |||| |||   |||| || |||| |||||||||||||||| || ||||||||    
T  26886369 ttgccaaataaatcc--gactgttaatttcaacctcaaatgatgtttacggtgaaccaaccttaagagtggtccaccataaa 26886448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 50 - 160
Target Start/End: Complemental strand, 18458747 - 18458637
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||||| ||||| |||||| ||||||| ||||||||| | ||||||||||||||||| |||||||||||||||||||||||||  ||| | |||||||    
T  18458747 taatttcaagtttttattttggtcccacaattaataaaacttgcgttttagtccctcactttttcctccgtttgccaaataaatctctggtttttaagtt 18458648  T
Q  150 taaccccaaat 160  Q
    ||||| |||||    
T  18458647 taacctcaaat 18458637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 21 - 177
Target Start/End: Original strand, 38240903 - 38241058
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    ||||||||| ||||  ||||||||||   ||||||||  |||| |||||| ||||||| |||||||||    ||||| ||||| |||  |||||||||||    
T  38240903 aggcttatttgatccattggtcccttgaataatttcaaatttttattttggtcccacaattaataaaacgtacgtttaagtccttcagattttcctccgt 38241002  T
Q  121 ttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaac 177  Q
    |||||||||||||||  |||||||||||||||| |||||||||||||||| ||||||    
T  38241003 ttgccaaataaatccc-ggctgttaagtttaactccaaatgtctatggtgaaccaac 38241058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 3817381 - 3817266
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||||||| ||||| ||||||||||| || ||  ||||||||||| ||||| |  ||||    
T  3817381 ggcttattagatcgtttggtcccctaactaatttcatgttttcattttggtcccatatttaataaaagtgtcgaattagtccctcaacttttgcgacgtt 3817282  T
Q  122 tgccaaataaatcctt 137  Q
    ||||||| ||||||||    
T  3817281 tgccaaaaaaatcctt 3817266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 53194960 - 53194837
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||||| |||||||||||| ||||| | |||||||||    |||||| ||||||||| ||||||||  |||||||||||||||| || ||||||||||    
T  53194960 taatttcaagttttcattttggtcccataattaataaaacgtacgttttggtccctcactttttcctctatttgccaaataaatccatgtctgttaagtt 53194861  T
Q  150 taaccccaaatgtctatggtggac 173  Q
    |||| | |||||||||||||||||    
T  53194860 taactcaaaatgtctatggtggac 53194837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 38242606 - 38242456
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||||| |||||||||||||||||||| |||||||||    | |||| ||||||||| ||||  || ||||||||||||||||||   | ||||||||    
T  38242606 taatttcaagttttcattttgatcccacaattaataaaacgtaccttttggtccctcacttttttatctgtttgccaaataaatcctca-cagttaagtt 38242508  T
Q  150 taaccccaa--atgtctatggtggaccaaccttaagagtgctctaccataaa 199  Q
    |||| | ||  ||||||||||||||||||||||||||||| || ||||||||    
T  38242507 taactcaaatgatgtctatggtggaccaaccttaagagtggtccaccataaa 38242456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 50 - 197
Target Start/End: Original strand, 53420342 - 53420490
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttgg-ctgttaagt 148  Q
    ||||||||| ||||||||||| ||| ||| |||||||||    |||||| ||||||||| |||| ||||||||  ||||||||||| | | || ||||||    
T  53420342 taatttcatattttcattttggtcctacaattaataaaacgtacgttttggtccctcacttttttctccgtttatcaaataaatccctagtctattaagt 53420441  T
Q  149 ttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||||| |||||||||||||||||||||| |||| |||| || ||||||    
T  53420442 ttaaccacaaatgtctatggtggaccaactttaaaagtgatccaccata 53420490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 40364345 - 40364472
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||||| |||||||||||| ||| | | |||||||||    ||||| |||||||||  |||| ||||||||||||||||||||||| | |||||||||    
T  40364345 taatttcaagttttcattttggtcctaaaattaataaaatgtacgtttaagtccctcatttttttctccgtttgccaaataaatccttcggtgttaagtt 40364444  T
Q  150 taaccccaaatgtctatggtggaccaac 177  Q
    |||||  |||||||||||||| ||||||    
T  40364445 taacctaaaatgtctatggtgaaccaac 40364472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 50809417 - 50809531
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||||||| ||||||  |||||||||||  ||||||||  ||||||||||| ||||| | |||||||||    |||||||||||||||| ||||||||||    
T  50809417 taggcttaatagatctattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctccg 50809516  T
Q  120 tttgccaaataaatc 134  Q
    |||||||||||||||    
T  50809517 tttgccaaataaatc 50809531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 50866445 - 50866331
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||||||| ||||||  |||||||||||  ||||||||  ||||||||||| ||||| | |||||||||    |||||||||||||||| ||||||||||    
T  50866445 taggcttaatagatctattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctccg 50866346  T
Q  120 tttgccaaataaatc 134  Q
    |||||||||||||||    
T  50866345 tttgccaaataaatc 50866331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 18442278 - 18442401
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||||| |||||||||||| ||||||| |||||||||    ||||||||||| |||  ||||||||   ||||||||||||| | ||  |||||||||    
T  18442278 taatttcaagttttcattttggtcccacaattaataaaacccacgttttagtccatcattttttcctc---ttgccaaataaattcatgt-tgttaagtt 18442373  T
Q  150 taaccccaaatgtctatggtggaccaac 177  Q
    ||||||||||||||||||||||||||||    
T  18442374 taaccccaaatgtctatggtggaccaac 18442401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 19487352 - 19487475
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||||| |||||||||||| ||||||| |||||||||    ||||||||||| |||  ||||||||   ||||||||||||| | ||  |||||||||    
T  19487352 taatttcaagttttcattttggtcccacaattaataaaacccacgttttagtccatcattttttcctc---ttgccaaataaattcatgt-tgttaagtt 19487447  T
Q  150 taaccccaaatgtctatggtggaccaac 177  Q
    ||||||||||||||||||||||||||||    
T  19487448 taaccccaaatgtctatggtggaccaac 19487475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 19 - 187
Target Start/End: Original strand, 40244182 - 40244348
Alignment:
Q  19 ataggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctcc 118  Q
    ||||||||||| ||||  |||||||||||  |||||||| |||||||||||| || |||| |||||||||    | |||| ||||||||  |||||||||    
T  40244182 ataggcttatttgatccattggtcccttaaataatttcaagttttcattttggtctcacaattaataaaacgtacattttggtccctcaaattttcctcc 40244281  T
Q  119 gtttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
    ||||||||||||| |  ||| | ||||| ||||||  ||| ||||||||||||||||| ||||| ||||    
T  40244282 gtttgccaaataatt--ttgacagttaactttaacttcaagtgtctatggtggaccaaacttaaaagtg 40244348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 3811525 - 3811640
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    |||||||||||||||||||| || ||  ||||||||||||||||||||| ||||| ||||||||||| || ||  ||||||||||| ||||| |   |||    
T  3811525 ggcttattagatcgtttggtaccctaactaatttcatgttttcattttggtcccatatttaataaaagtgtcgaattagtccctcaacttttgccaagtt 3811624  T
Q  122 tgccaaataaatcctt 137  Q
    ||||||| ||||||||    
T  3811625 tgccaaaaaaatcctt 3811640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 42686265 - 42686151
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    ||||||||||||||| |||| |||||||  |||||  ||||||| |||||||||| ||| |||||||||  ||| |||||||||||||| |||| ||| |    
T  42686265 taggcttattagatcatttgatcccttaaataattctatgtttttattttgatcctacaattaataaaacaggcattttagtccctcacttttttctctg 42686166  T
Q  120 tttgccaaataaatc 134  Q
    |||| ||||||||||    
T  42686165 tttgtcaaataaatc 42686151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 50810954 - 50810840
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||||||| ||||||  |||||||||||  ||||||||  ||||||||||| ||||| | |||||||||    |||||||||||||||  ||||||||||    
T  50810954 taggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccg 50810855  T
Q  120 tttgccaaataaatc 134  Q
    |||||||||||||||    
T  50810854 tttgccaaataaatc 50810840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 50864910 - 50865024
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||||||| ||||||  |||||||||||  ||||||||  ||||||||||| ||||| | |||||||||    |||||||||||||||  ||||||||||    
T  50864910 taggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccg 50865009  T
Q  120 tttgccaaataaatc 134  Q
    |||||||||||||||    
T  50865010 tttgccaaataaatc 50865024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 177
Target Start/End: Complemental strand, 20288328 - 20288187
Alignment:
Q  36 tttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcc 135  Q
    ||||||||| || |||||||   |||||||||||||||||| | ||||||||| |   || || ||||||||  |||  ||| ||| | |||||||||||    
T  20288328 tttggtcccctaattaatttttagttttcattttgatcccataattaataaaactcatgtgttggtccctcaagtttgtctctgttagtcaaataaatcc 20288229  T
Q  136 ttggctgttaagtttaaccccaaatgtctatggtggaccaac 177  Q
     || |||||||||||||| |||||||||||||||||||||||    
T  20288228 ctgactgttaagtttaactccaaatgtctatggtggaccaac 20288187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 34819374 - 34819227
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||||| |||||||||||||||| ||| |||||||||    ||||| ||||| ||| ||||| ||| ||||||||||| | ||||| |||||||||||    
T  34819374 taatttcaagttttcattttgatcctacaattaataaaacgtacgtttaagtccttca-ctttttctctgtttgccaaat-agtcctt-gctgttaagtt 34819278  T
Q  150 taaccccaa---atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||||||||   |||||||| ||||| |||||||||||||| || ||||||    
T  34819277 taaccccaaatgatgtctatagtggatcaaccttaagagtggtccaccata 34819227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 40 - 132
Target Start/End: Complemental strand, 37736181 - 37736089
Alignment:
Q  40 gtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaa 132  Q
    ||||||||  ||||||||||||||||||||| || |||| |||||||||    |||||||||||||||| |||| ||||||||||||||||||    
T  37736181 gtcccttaaataatttcatgttttcattttggtctcacaattaataaaacgtacgttttagtccctcacttttttctccgtttgccaaataaa 37736089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 21 - 177
Target Start/End: Complemental strand, 53624480 - 53624325
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    ||||||||| ||||   |||||||| |  |||||||| ||||||||||||||| |||| |||||||||    | |||| ||| ||||| |||| ||| ||    
T  53624480 aggcttatttgatccaatggtccctcaaataatttcaagttttcattttgatctcacaattaataaaacgtacattttggtcactcacttttttctcggt 53624381  T
Q  121 ttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaac 177  Q
    |||||||||||||||  | | |||| |||||||||||||||| ||||||||||||||    
T  53624380 ttgccaaataaatcca-gacggttaggtttaaccccaaatgtatatggtggaccaac 53624325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 3208520 - 3208660
Alignment:
Q  60 ttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtttaaccccaaa 159  Q
    ||||||||||| ||||| | |||||||||    ||||||  ||||| |  |||||||||||||| |||||||||||||  | ||||||||||||||||||    
T  3208520 ttttcattttggtcccataattaataaaacgtacgttttgatcccttattttttcctccgtttgtcaaataaatccttacc-gttaagtttaaccccaaa 3208618  T
Q  160 tgtc--tatggtggaccaaccttaagagtgctctaccataaa 199  Q
    ||    |||||||||||||||||||||||| || ||||||||    
T  3208619 tgatattatggtggaccaaccttaagagtggtccaccataaa 3208660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 21 - 160
Target Start/End: Original strand, 53187556 - 53187693
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    ||||||||| |||||  ||||||| ||  |||||||| |||||||||||||||  ||| ||||||||| ||    ||| ||||||||| ||||| |||||    
T  53187556 aggcttatttgatcgaatggtcccctaaataatttcaagttttcattttgatcttacaattaataaaa-tgtatgtttggtccctcactttttcttccgt 53187654  T
Q  121 ttgccaaataaatccttggctgttaagtttaaccccaaat 160  Q
    ||||||||||||||| |  | |||||||||||||||||||    
T  53187655 ttgccaaataaatccct-accgttaagtttaaccccaaat 53187693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 197
Target Start/End: Complemental strand, 12108083 - 12107921
Alignment:
Q  40 gtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaata--aatcctt 137  Q
    ||||||||  |||||||| |||||||||||| |||||||  ||||||||      |||| ||||||||| |||||||||||||||||||||  ||  |      
T  12108083 gtcccttaaataatttcaagttttcattttggtcccacaactaataaaacatatattttggtccctcactttttcctccgtttgccaaataataaatcac 12107984  T
Q  138 ggctgttaagtttaaccccaaatg---tctatggtggaccaaccttaagagtgctctaccata 197  Q
    || |||||| ||||||||||||||   | ||||||||||||||||||| |||| || ||||||    
T  12107983 gggtgttaaatttaaccccaaatgatatttatggtggaccaaccttaaaagtggtccaccata 12107921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 36175332 - 36175415
Alignment:
Q  93 cgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaac 177  Q
    |||||| || |||||  |||| |||||||||||||||||||||  | |||||||||||||||||||||||||||| |||| ||||    
T  36175332 cgttttggtgcctcatttttttctccgtttgccaaataaatccg-gactgttaagtttaaccccaaatgtctatgatggatcaac 36175415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 192
Target Start/End: Original strand, 53622748 - 53622832
Alignment:
Q  110 ttttcctccgtttgccaaataaatccttggctgttaagtttaaccccaaatg---tctatggtggaccaaccttaagagtgctcta 192  Q
    |||||||||||||||||| |||||||    | ||||||||||||||||||||   |||||||||||||||||||||||||| ||||    
T  53622748 ttttcctccgtttgccaactaaatcccaa-cggttaagtttaaccccaaatgatgtctatggtggaccaaccttaagagtggtcta 53622832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 41 - 166
Target Start/End: Complemental strand, 23443556 - 23443431
Alignment:
Q  41 tcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggc 140  Q
    ||||||| ||||||| |  ||||||||||| ||||| | |||||||||    | ||| ||||| ||| |||||| || |||||||||||||||| ||||     
T  23443556 tcccttaattaattttaacttttcattttggtcccaaaattaataaaacgtacctttaagtccttcatcttttcttctgtttgccaaataaatcattgg- 23443458  T
Q  141 tgttaagtttaa-ccccaaatgtctat 166  Q
    |||||||||||| ||||||||||||||    
T  23443457 tgttaagtttaacccccaaatgtctat 23443431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 135
Target Start/End: Original strand, 18197173 - 18197258
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcc 135  Q
    ||||||||  ||||||||||| ||||||| |||||||||    | |||| ||||||||  ||||||||||||||||||||||||||    
T  18197173 taatttcaaattttcattttggtcccacaattaataaaacgtaccttttggtccctcattttttcctccgtttgccaaataaatcc 18197258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 67 - 197
Target Start/End: Complemental strand, 27841783 - 27841652
Alignment:
Q  67 tttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtttaaccccaa--atgtct 164  Q
    |||| ||||||| ||||||||||| || ||||||||| |||||||||| | |||||| ||||||||| |  |   ||||||||||| |  ||  |||| |    
T  27841783 tttggtcccacaattaataaaaatagctttttagtccttcaccttttctttcgtttgtcaaataaattc-cgatggttaagtttaatctaaattatgttt 27841685  T
Q  165 atggtggaccaaccttaagagtgctctaccata 197  Q
    ||||||||||||||||||||||| || ||||||    
T  27841684 atggtggaccaaccttaagagtggtccaccata 27841652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 48083340 - 48083400
Alignment:
Q  137 tggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||| ||||| ||||||| ||||||||||||||| || ||||||||||||| |||||||||    
T  48083340 tggcggttaactttaaccacaaatgtctatggtgcactaaccttaagagtggtctaccata 48083400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 7270441 - 7270496
Alignment:
Q  142 gttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||| ||||||| ||||||||| | |||||||||||||||||||| |||||||||    
T  7270441 gttaactttaacctcaaatgtctgtagtggaccaaccttaagagtggtctaccata 7270496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 20336682 - 20336620
Alignment:
Q  115 ctccgtttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaac 177  Q
    ||||||| | ||||||||| | || |||||||||||||| ||||||||||||| |||||||||    
T  20336682 ctccgttagtcaaataaattcatgactgttaagtttaactccaaatgtctatgttggaccaac 20336620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 134
Target Start/End: Complemental strand, 36176598 - 36176512
Alignment:
Q  49 ttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctca-ccttttcctccgtttgccaaataaatc 134  Q
    |||||||||||||||||||||| ||||||| |||||||||     ||||| ||||||||   |||||||| ||||||||||||||||    
T  36176598 ttaatttcatgttttcattttggtcccacaattaataaaatgtatgttttggtccctcatttttttcctctgtttgccaaataaatc 36176512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 135
Target Start/End: Original strand, 41544675 - 41544773
Alignment:
Q  37 ttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcc 135  Q
    ||||||| |||  |||||||| |||||||||||| ||| | | |||||| ||    ||||| |||||||||| |||||||| |||||||||||||||||    
T  41544675 ttggtccattaaataatttcaagttttcattttggtcctataattaatataacgtacgtttaagtccctcactttttcctctgtttgccaaataaatcc 41544773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 49 - 170
Target Start/End: Original strand, 24403264 - 24403385
Alignment:
Q  49 ttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagt 148  Q
    ||||||||| ||||||||| || || || | ||||||||| |   ||||| ||||||||  ||  |||||||||| ||| ||||||| ||  |||||| |    
T  24403264 ttaatttcaagttttcattatggtctcataattaataaaatttatgttttggtccctcaagttcacctccgtttgtcaagtaaatccatgtttgttaact 24403363  T
Q  149 ttaaccccaaatgtctatggtg 170  Q
    ||||||| ||||||||||||||    
T  24403364 ttaaccctaaatgtctatggtg 24403385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 187
Target Start/End: Complemental strand, 14745192 - 14745153
Alignment:
Q  148 tttaaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  14745192 tttaaccccaaatatctgtggtggaccaaccttaagagtg 14745153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 10301053 - 10301107
Alignment:
Q  143 ttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||| ||||||| ||||| ||||||||| |||||||||||||||| || ||||||    
T  10301053 ttaactttaacctcaaatatctatggtgaaccaaccttaagagtgatccaccata 10301107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 11224839 - 11224785
Alignment:
Q  143 ttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||| ||||| |||||||||  ||||||||||||||||||||||| || ||||||    
T  11224839 ttaactttaatcccaaatgttcatggtggaccaaccttaagagtggtccaccata 11224785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 37735302 - 37735416
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||||||||| ||||  ||||||| |||  |||||| | |||||||||||| ||||| | |||||||||     ||||||||||||||  |||| || ||    
T  37735302 taggcttatttgatccattggtcctttaaataattttaagttttcattttggtcccataattaataaaacgtatgttttagtccctcatttttttcttcg 37735401  T
Q  120 tttgccaaataaatc 134  Q
    |||| ||||||||||    
T  37735402 tttgtcaaataaatc 37735416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 135
Target Start/End: Complemental strand, 53421852 - 53421766
Alignment:
Q  49 ttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcc 135  Q
    ||||||| | |||||||||||  ||| ||| |||||||||    |||||| ||||||||| |||| ||| |||||||||||||||||    
T  53421852 ttaattttacgttttcattttagtcctacaattaataaaacgtacgttttggtccctcacttttttctctgtttgccaaataaatcc 53421766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 133
Target Start/End: Original strand, 44182302 - 44182391
Alignment:
Q  44 cttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaat 133  Q
    |||||||||||   || ||| |||||| || |||| ||||||||| |  ||||||||||| |||| |||||| | |||||||||||||||    
T  44182302 cttatttaattctttggttttattttggtctcacaattaataaaactcacgttttagtccttcactttttccacagtttgccaaataaat 44182391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 187
Target Start/End: Complemental strand, 55328396 - 55328256
Alignment:
Q  49 ttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcac--cttttcctccgtttgccaaataaatccttggctgttaa 146  Q
    ||||||||| ||||||||||||||| || | ||||||||| |   |||||||||||||||   ||||  |   |||| |||||||||| || ||| ||||    
T  55328396 ttaatttcaagttttcattttgatctcataattaataaaattcatgttttagtccctcactttttttttttgatttgtcaaataaatcgttagctattaa 55328297  T
Q  147 gtttaaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
    ||||||||  |||||||||  || || ||||||||| ||||    
T  55328296 gtttaaccttaaatgtctacagttgatcaaccttaaaagtg 55328256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 8795934 - 8795990
Alignment:
Q  18 aataggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcc 74  Q
    |||||||||||||||||  ||| |||| ||  |||||||| ||||||||||||||||    
T  8795934 aataggcttattagatccattgatcccctaaataatttcaagttttcattttgatcc 8795990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 20314779 - 20314727
Alignment:
Q  125 caaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaac 177  Q
    ||||||||| | || |||||||||||||| ||||||||||||| | |||||||    
T  20314779 caaataaattcatgactgttaagtttaactccaaatgtctatgttagaccaac 20314727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 43174810 - 43174770
Alignment:
Q  36 tttggtcccttatttaatttcatgttttcattttgatccca 76  Q
    |||||||||||||||||||| | ||||||||||||| ||||    
T  43174810 tttggtcccttatttaattttaagttttcattttgacccca 43174770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 98; Significance: 4e-48; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 20 - 235
Target Start/End: Complemental strand, 63251 - 63037
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||| |||||||||||||||||||   |  ||||||| ||||||||||||| ||||||| |||||||| |||||||||||||||||||| |||| |||||    
T  63251 taggtttattagatcgtttggtcctccaaataatttcgtgttttcattttggtcccacaattaataaagatggcgttttagtccctcacatttttctccg 63152  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccataaacatcattaannnnnnnaaat 219  Q
    |||||||||||||||| || ||||||||||||||  |||||||||||| |||| ||| ||||||| || || ||||||||| |||||||       ||||    
T  63151 tttgccaaataaatccctgactgttaagtttaacttcaaatgtctatgatggatcaatcttaagaatggtccaccataaacttcattaa-ttttttaaat 63053  T
Q  220 tttaaccgtttgatct 235  Q
    ||||||||||||||||    
T  63052 tttaaccgtttgatct 63037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 61847 - 61961
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    ||||||||||||| ||||||||||| ||  ||||||||||||||||||||| || || | |||||||||||||||||||||||||||| |||||| ||||    
T  61847 taggcttattagaacgtttggtcccctaaataatttcatgttttcattttggtctcataattaataaaaatggcgttttagtccctcatcttttcttccg 61946  T
Q  120 tttgccaaataaatc 134  Q
    |||||||||||||||    
T  61947 tttgccaaataaatc 61961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 76; Significance: 6e-35; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 50 - 197
Target Start/End: Original strand, 123995 - 124141
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    |||||||| |||||||||||| ||||||| |||||||||    | |||| ||||||||| |||||||| |||||||||||||||||||  | ||||||||    
T  123995 taatttcaagttttcattttggtcccacaattaataaaacgtacattttggtccctcactttttcctctgtttgccaaataaatcctta-cggttaagtt 124093  T
Q  150 taaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    ||||||||||| |||||||||||||||||||||||||| || ||||||    
T  124094 taaccccaaatatctatggtggaccaaccttaagagtggtccaccata 124141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 125323 - 125174
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtt 149  Q
    ||||||||  ||||||||||| ||||||| |||||||||    | |||| ||||||||| |||||||||||||||||||||||||| |  | ||||||||    
T  125323 taatttcaaattttcattttggtcccacaattaataaaacgtaccttttggtccctcactttttcctccgtttgccaaataaatcc-taacggttaagtt 125225  T
Q  150 taaccccaa---atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||||||||   |||| |||| |||||||||||||| |||| || ||||||    
T  125224 taaccccaaatgatgtatatgatggaccaaccttaaaagtggtccaccata 125174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 25 - 160
Target Start/End: Complemental strand, 858 - 726
Alignment:
Q  25 ttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgc 124  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||| |||| || ||||||||||||||||| ||| |||  |  |||||||||||||||    
T  858 ttattagatcgtttggtcctttatttaatttcatgtttttattttggtccctcaattaataaaaatggcgttatagaccccaa--ttttcctccgtttgc 761  T
Q  125 caaataaatccttggctgttaagtttaaccccaaat 160  Q
    || |||||||| || ||||||| |||||||||||||    
T  760 catataaatcc-tgactgttaactttaaccccaaat 726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 237
Target Start/End: Original strand, 21124 - 21339
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaattt-catgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    ||||||||||||||  |||| |||| | ||||||| ||| ||||||||||  ||||| | ||||||||||   | ||||  ||||| |  ||||||||||    
T  21124 aggcttattagatccattggcccctcaattaattttcat-ttttcattttagtcccataattaataaaaagtaccttttgatcccttagtttttcctccg 21222  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccataaacatcattaannnnnnnaaat 219  Q
    ||||||||||||||| || | |||||||||||||| ||||||||||||||||||||||||| |||||| || |||||| || |||||||       ||||    
T  21223 tttgccaaataaatcattcgttgttaagtttaaccacaaatgtctatggtggaccaaccttcagagtggtccaccatagacttcattaa-ttttttaaat 21321  T
Q  220 tttaaccgtttgatcttt 237  Q
    ||||||||||||||||||    
T  21322 tttaaccgtttgatcttt 21339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 311
Target Start/End: Original strand, 21377 - 21414
Alignment:
Q  274 ttatcttacaatgatccaacaacaactaccattggatt 311  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21377 ttatcttacaatgatccaacaacaactaccattggatt 21414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 197
Target Start/End: Complemental strand, 54305 - 54126
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||||||||| ||||  ||||||||| |  |||||||| ||||| |||||| || |||| |||||||||   ||||||| ||||||||  ||||||||||    
T  54305 taggcttatttgatccattggtccctcaaataatttcaagttttaattttggtcgcacaattaataaaacgtgcgttttggtccctcaaattttcctccg 54206  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaa---atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |||||||||||||| | || ||||||||| |||||||||   |||||||||||||||||||||||| |||| || ||||||    
T  54205 tttgccaaataaat-cgtgactgttaagtataaccccaaatgatgtctatggtggaccaaccttaaaagtggtccaccata 54126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 49 - 182
Target Start/End: Original strand, 52617 - 52749
Alignment:
Q  49 ttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagt 148  Q
    ||||||||| |||||||||||||||||||| |||||||||    |||||| ||||||||  |||| |||||||||||||||||||||  | | ||||| |    
T  52617 ttaatttcaagttttcattttgatcccacaattaataaaatgtacgttttggtccctcagatttttctccgtttgccaaataaatcc-cgacagttaact 52715  T
Q  149 ttaaccccaaatgtctatggtggaccaaccttaa 182  Q
    |||||   |||||| |||||||||||||||||||    
T  52716 ttaactttaaatgtatatggtggaccaaccttaa 52749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 37 - 197
Target Start/End: Complemental strand, 43678 - 43516
Alignment:
Q  37 ttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcct 136  Q
    ||||||||| |  |||||| | ||||| |||||| ||||| | |||||||||     |||| |||||||||| |||||||||||||||||||||| |||     
T  43678 ttggtccctcaaataattttaagtttttattttggtcccataattaataaaacgtatgtttaagtccctcactttttcctccgtttgccaaataagtcc- 43580  T
Q  137 tggctgttaagtttaaccccaa---atgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    || | |||||||||||||||||   |||||||||||||||||| |||||||||| || ||||||    
T  43579 tgacggttaagtttaaccccaagtgatgtctatggtggaccaatcttaagagtggtccaccata 43516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 20 - 197
Target Start/End: Original strand, 127429 - 127606
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||||||| ||| || ||||||||| || ||||||||| |||||| ||||| ||||| |  |||||||| |   ||||| ||||||||  ||| ||||||    
T  127429 taggcttaataggtcatttggtcccctaattaatttcaagttttcgttttggtcccataactaataaaactcatgttttggtccctcatgtttgcctccg 127528  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
    |  | ||||||||||| || | ||||| ||||||| ||||||||||||||| | |||||||||||||| || ||||||    
T  127529 tcggtcaaataaatccctgacagttaactttaacctcaaatgtctatggtgaaacaaccttaagagtggtccaccata 127606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1251 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold1251
Description:

Target: scaffold1251; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 177
Target Start/End: Complemental strand, 1205 - 1048
Alignment:
Q  20 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccg 119  Q
    |||||||| ||| || |||||||||| |  |||||||  |||||||||||| ||||| |  |||||||| |   ||||| ||||||||  ||  ||||||    
T  1205 taggcttaataggtcatttggtccctcaaataatttccagttttcattttggtcccataagtaataaaactcatgttttggtccctcaaattcacctccg 1106  T
Q  120 tttgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaac 177  Q
    |  | ||||||||| | ||| |||||| ||||||||||||||||||||||||||||||    
T  1105 tcagtcaaataaattcatgggtgttaactttaaccccaaatgtctatggtggaccaac 1048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 50 - 135
Target Start/End: Original strand, 18838 - 18923
Alignment:
Q  50 taatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcc 135  Q
    |||||| | |||||||||||| ||||| ||||||||||| |   ||||||||||||||| |||| |||||||||||||||||||||    
T  18838 taattttaagttttcattttggtcccatatttaataaaacttatgttttagtccctcactttttactccgtttgccaaataaatcc 18923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 64 - 197
Target Start/End: Original strand, 108553 - 108687
Alignment:
Q  64 cattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccttggctgttaagtttaaccccaaat--g 161  Q
    ||||||||||||| | |||||||||    ||||||  |||||||  ||||||||| |||||||||||||||||| || |||||||||||||||||||       
T  108553 cattttgatcccataattaataaaacgtacgttttgatccctcattttttcctccatttgccaaataaatcctt-gcagttaagtttaaccccaaataat 108651  T
Q  162 tctatggtggaccaaccttaagagtgctctaccata 197  Q
      ||||||||||||||||||| |||| || ||||||    
T  108652 attatggtggaccaaccttaaaagtggtccaccata 108687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 182
Target Start/End: Complemental strand, 109847 - 109704
Alignment:
Q  38 tggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcctt 137  Q
    ||||||||||  |||||||| |||||||||||| ||| ||| |||||||||    | |||||||||||||| |||| |||  |||||||||| |||||      
T  109847 tggtcccttaaataatttcaagttttcattttggtcctacaattaataaaacgtacattttagtccctcacttttttctcaatttgccaaatgaatcc-c 109749  T
Q  138 ggctgttaagtttaaccccaaatgtctatggtggaccaaccttaa 182  Q
      || |||| ||||||  ||||||| |||||||||||||||||||    
T  109748 aactattaactttaacttcaaatgtatatggtggaccaaccttaa 109704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 192
Target Start/End: Complemental strand, 2594 - 2424
Alignment:
Q  21 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgt 120  Q
    ||||||||||||||  ||||||||| | ||||||||   ||||||||||| ||||||| ||||||||||   | |||| |||||| |  |||||||| ||    
T  2594 aggcttattagatcaattggtccctcaattaatttcca-ttttcattttggtcccacaattaataaaaagtaccttttggtcccttagtttttcctctgt 2496  T
Q  121 ttgccaaataaatccttggctgttaagtttaaccccaaatgtct-atggtggaccaaccttaagagtgctcta 192  Q
    || |||||||||| |  | ||||||| |||||| |||||| | | |||||||||||||||||| |||| ||||    
T  2495 tttccaaataaattc-cgactgttaactttaactccaaatatgtaatggtggaccaaccttaaaagtggtcta 2424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2071 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 197
Target Start/End: Complemental strand, 799 - 624
Alignment:
Q  22 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctccgtt 121  Q
    |||||| ||| || ||||||||  || ||||||||  |||||||||||| ||||| |  |||||||| |   ||||| ||||||||  |||  ||| ||     
T  799 ggcttaataggtcatttggtcctctaattaatttccagttttcattttggtcccataactaataaaactcatgttttggtccctcaagtttgtctctgtc 700  T
Q  122 tgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtgctctaccata 197  Q
     | ||||||||||| ||  ||| |||||||||| ||||||| |||  ||||||||||||||||||| || ||||||    
T  699 ggtcaaataaatccctgattgtcaagtttaacctcaaatgtatataatggaccaaccttaagagtggtccaccata 624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 185
Target Start/End: Complemental strand, 8188 - 8145
Alignment:
Q  142 gttaagtttaaccccaaatgtctatggtggaccaaccttaagag 185  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||    
T  8188 gttaattttaaccccaaatgtctatggtggatcaaccttaagag 8145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 32670 - 32733
Alignment:
Q  123 gccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtg 187  Q
    ||||||||||||||   ||||||| |||||||  ||||||||||||||||||||||||| |||||    
T  32670 gccaaataaatcctaa-ctgttaactttaaccttaaatgtctatggtggaccaaccttaggagtg 32733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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