View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1752_high_1 (Length: 480)
Name: NF1752_high_1
Description: NF1752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1752_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 455; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 455; E-Value: 0
Query Start/End: Original strand, 1 - 455
Target Start/End: Complemental strand, 44461807 - 44461353
Alignment:
| Q |
1 |
atcatttccaggaatagaattatcgcaggtagtaatagcagccaaagcagccttcaaccatttctgactatcaacatcagattcaaccaacaaagcagca |
100 |
Q |
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| T |
44461807 |
atcatttccaggaatagaattatcgcaggtagtaatagcagccaaagcagccttcaaccatttctgactatcaacatcagattcaaccaacaaagcagca |
44461708 |
T |
|
| Q |
101 |
atagtgtcttcaagttgagactcagcatccaatatattttctttgcaatcagccaaaccttgttgaacttcagggtctaaattagcatcatcaatcattg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44461707 |
atagtgtcttcaagttgagactcagcatccaatatattttctttgcaatcagccaaaccttgttgaacttcagggtctaaattagcatcatcaatcattg |
44461608 |
T |
|
| Q |
201 |
atttcacgtcgtttaacattgcagaagcatttctagcagcaactcttagtgctataattgccaaatcattaatgtcgtctgcgtttgcggattttgggtc |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44461607 |
atttcacgtcgtttaacattgcagaagcatttctagcagcaactcttagtgctataattgccaaatcattaatgtcgtctgcgtttgcggattttgggtc |
44461508 |
T |
|
| Q |
301 |
ggatgacagaacttcaacacagaggtcactgtttttctgtgctagctggcatacccttgtgattaaatctttacctttggtttcttgtgcgactgtttgg |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44461507 |
ggatgacagaacttcaacacagaggtcactgtttttctgtgctagctggcatacccttgtgattaaatctttacctttggtttcttgtgcgactgtttgg |
44461408 |
T |
|
| Q |
401 |
tgtgccaatacaatcacacagataaccaaaaccgagaagagttttgtcatgatgt |
455 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44461407 |
tgtgccaatacaatcacacagataaccaaaaccgagaagagttttgtcatgatgt |
44461353 |
T |
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