View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17531_high_18 (Length: 302)

Name: NF17531_high_18
Description: NF17531
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17531_high_18
NF17531_high_18
[»] scaffold0433 (2 HSPs)
scaffold0433 (102-302)||(7107-7307)
scaffold0433 (10-66)||(7015-7071)
[»] scaffold0234 (4 HSPs)
scaffold0234 (102-302)||(2328-2528)
scaffold0234 (102-302)||(11219-11419)
scaffold0234 (10-66)||(2564-2620)
scaffold0234 (10-66)||(11455-11511)
[»] chr7 (27 HSPs)
chr7 (102-302)||(29327784-29327984)
chr7 (102-302)||(11536069-11536269)
chr7 (102-302)||(11542987-11543187)
chr7 (104-302)||(18561009-18561207)
chr7 (104-302)||(15148144-15148342)
chr7 (104-302)||(15152445-15152643)
chr7 (108-302)||(12738542-12738736)
chr7 (104-294)||(12750828-12751018)
chr7 (104-294)||(18257857-18258047)
chr7 (108-290)||(13392157-13392338)
chr7 (124-294)||(2364917-2365086)
chr7 (9-66)||(2653275-2653332)
chr7 (9-66)||(12738442-12738499)
chr7 (135-294)||(7396221-7396381)
chr7 (10-66)||(11543223-11543279)
chr7 (108-195)||(39111819-39111905)
chr7 (10-66)||(11536305-11536361)
chr7 (10-66)||(12750733-12750789)
chr7 (10-66)||(15152350-15152406)
chr7 (10-65)||(29327690-29327745)
chr7 (10-66)||(15148049-15148105)
chr7 (176-217)||(3132748-3132789)
chr7 (152-251)||(10234179-10234278)
chr7 (10-65)||(13392030-13392085)
chr7 (102-134)||(2653207-2653239)
chr7 (10-66)||(18258087-18258143)
chr7 (131-181)||(29982995-29983045)
[»] chr5 (20 HSPs)
chr5 (102-302)||(24695473-24695673)
chr5 (102-302)||(18569870-18570070)
chr5 (104-302)||(19714505-19714703)
chr5 (108-302)||(19707225-19707419)
chr5 (107-290)||(27347497-27347679)
chr5 (108-294)||(22547031-22547217)
chr5 (106-287)||(17285754-17285935)
chr5 (102-211)||(39537962-39538071)
chr5 (168-302)||(18807041-18807175)
chr5 (106-287)||(17298907-17299088)
chr5 (10-66)||(24695709-24695765)
chr5 (108-211)||(31886537-31886640)
chr5 (10-66)||(19714742-19714798)
chr5 (10-66)||(19707462-19707518)
chr5 (10-66)||(27347722-27347778)
chr5 (222-302)||(39538708-39538788)
chr5 (128-217)||(33477390-33477479)
chr5 (18-66)||(18570108-18570156)
chr5 (10-65)||(39537870-39537925)
chr5 (152-217)||(11479420-11479486)
[»] chr4 (46 HSPs)
chr4 (102-302)||(19926767-19926967)
chr4 (102-302)||(10621340-10621540)
chr4 (102-302)||(26970463-26970663)
chr4 (102-302)||(55612683-55612883)
chr4 (102-302)||(5707320-5707520)
chr4 (102-302)||(10628419-10628619)
chr4 (102-302)||(26963640-26963840)
chr4 (104-302)||(28393141-28393339)
chr4 (102-302)||(5713948-5714148)
chr4 (102-302)||(868597-868797)
chr4 (104-302)||(18262214-18262412)
chr4 (104-302)||(4426611-4426808)
chr4 (104-302)||(18269070-18269273)
chr4 (114-300)||(8845215-8845401)
chr4 (114-300)||(8858179-8858365)
chr4 (102-217)||(12357136-12357251)
chr4 (110-301)||(20311299-20311491)
chr4 (108-294)||(5668140-5668327)
chr4 (108-302)||(10677562-10677753)
chr4 (108-302)||(10891202-10891393)
chr4 (104-301)||(5616215-5616414)
chr4 (108-302)||(35223576-35223760)
chr4 (9-66)||(19927003-19927060)
chr4 (10-66)||(5713856-5713912)
chr4 (10-66)||(26963548-26963604)
chr4 (10-66)||(26970371-26970427)
chr4 (128-294)||(21454152-21454319)
chr4 (10-66)||(5707228-5707284)
chr4 (10-66)||(10621576-10621632)
chr4 (10-66)||(12357044-12357100)
chr4 (12-66)||(868507-868561)
chr4 (9-66)||(17142372-17142429)
chr4 (10-66)||(10628655-10628711)
chr4 (10-66)||(55612594-55612650)
chr4 (8-66)||(4426847-4426905)
chr4 (10-64)||(28393380-28393434)
chr4 (10-66)||(18268976-18269032)
chr4 (140-301)||(56516094-56516255)
chr4 (151-217)||(39074279-39074346)
chr4 (17-66)||(55992680-55992729)
chr4 (152-211)||(11161913-11161972)
chr4 (240-291)||(39074218-39074269)
chr4 (25-66)||(5668371-5668412)
chr4 (18-66)||(8845118-8845166)
chr4 (18-66)||(8858082-8858130)
chr4 (26-66)||(18262136-18262176)
[»] chr1 (26 HSPs)
chr1 (102-302)||(18252030-18252230)
chr1 (102-302)||(27131416-27131616)
chr1 (102-302)||(18532521-18532721)
chr1 (104-302)||(16359042-16359240)
chr1 (104-302)||(27310584-27310782)
chr1 (104-302)||(21171240-21171438)
chr1 (108-294)||(36816648-36816834)
chr1 (102-302)||(3855926-3856126)
chr1 (102-294)||(22657236-22657429)
chr1 (108-302)||(27277564-27277756)
chr1 (136-294)||(12006554-12006712)
chr1 (136-301)||(12014292-12014457)
chr1 (114-300)||(9917927-9918106)
chr1 (9-66)||(18251935-18251992)
chr1 (9-66)||(18532757-18532814)
chr1 (10-66)||(27310821-27310877)
chr1 (10-66)||(16359280-16359336)
chr1 (132-209)||(3403248-3403325)
chr1 (132-209)||(3443494-3443571)
chr1 (10-66)||(21171479-21171535)
chr1 (10-59)||(22657472-22657521)
chr1 (108-177)||(30720625-30720694)
chr1 (18-59)||(36816885-36816926)
chr1 (10-66)||(3856164-3856220)
chr1 (10-66)||(27131652-27131704)
chr1 (10-66)||(27277800-27277856)
[»] chr3 (53 HSPs)
chr3 (102-302)||(6110064-6110264)
chr3 (102-302)||(10572599-10572799)
chr3 (104-302)||(16482490-16482688)
chr3 (108-302)||(17781125-17781319)
chr3 (104-302)||(18522665-18522863)
chr3 (102-302)||(15600891-15601091)
chr3 (102-302)||(15607436-15607636)
chr3 (102-288)||(8490488-8490674)
chr3 (105-302)||(13211305-13211502)
chr3 (102-302)||(13248607-13248807)
chr3 (108-302)||(19089752-19089946)
chr3 (102-302)||(15357593-15357793)
chr3 (108-302)||(10579362-10579556)
chr3 (104-302)||(13516813-13517011)
chr3 (104-302)||(18519980-18520175)
chr3 (104-302)||(17200191-17200389)
chr3 (108-302)||(32056907-32057101)
chr3 (121-302)||(15342226-15342407)
chr3 (102-263)||(18640792-18640953)
chr3 (108-294)||(1647536-1647726)
chr3 (102-294)||(29924971-29925163)
chr3 (102-294)||(29974124-29974316)
chr3 (104-290)||(16200128-16200313)
chr3 (104-290)||(16200434-16200619)
chr3 (109-302)||(24253395-24253589)
chr3 (208-302)||(17136465-17136559)
chr3 (104-165)||(18534758-18534819)
chr3 (10-66)||(6109972-6110028)
chr3 (10-66)||(8490396-8490452)
chr3 (10-66)||(13248515-13248571)
chr3 (10-66)||(13211211-13211267)
chr3 (10-66)||(18640989-18641045)
chr3 (10-59)||(10579604-10579653)
chr3 (104-149)||(18510924-18510969)
chr3 (10-66)||(17136137-17136193)
chr3 (10-59)||(10572841-10572890)
chr3 (10-66)||(15607672-15607729)
chr3 (10-59)||(17200434-17200483)
chr3 (10-66)||(15351237-15351293)
chr3 (10-66)||(15357829-15357885)
chr3 (10-66)||(16482727-16482782)
chr3 (10-66)||(18519885-18519941)
chr3 (9-66)||(1647768-1647825)
chr3 (10-66)||(15601127-15601184)
chr3 (10-66)||(13516719-13516775)
chr3 (10-54)||(17781370-17781414)
chr3 (10-54)||(19089997-19090041)
chr3 (10-66)||(32057144-32057200)
chr3 (10-66)||(18510829-18510885)
chr3 (10-66)||(18522570-18522626)
chr3 (18-66)||(18534671-18534719)
chr3 (10-66)||(29924879-29924935)
chr3 (10-66)||(29974032-29974088)
[»] chr6 (29 HSPs)
chr6 (104-302)||(16566327-16566525)
chr6 (102-302)||(29308890-29309090)
chr6 (102-302)||(29315850-29316050)
chr6 (102-302)||(17691447-17691647)
chr6 (102-302)||(27381259-27381459)
chr6 (102-302)||(27471642-27471842)
chr6 (104-302)||(188984-189182)
chr6 (104-302)||(17684476-17684674)
chr6 (104-302)||(11651725-11651923)
chr6 (104-302)||(25537166-25537364)
chr6 (104-292)||(13359286-13359474)
chr6 (121-294)||(8509941-8510115)
chr6 (125-294)||(27925772-27925946)
chr6 (12-66)||(17691683-17691737)
chr6 (10-59)||(27381502-27381551)
chr6 (10-59)||(27471885-27471934)
chr6 (10-66)||(29308798-29308854)
chr6 (10-66)||(29315758-29315814)
chr6 (141-302)||(20553594-20553755)
chr6 (10-66)||(17684712-17684768)
chr6 (10-64)||(11651630-11651684)
chr6 (10-66)||(25537405-25537461)
chr6 (109-164)||(31258065-31258120)
chr6 (140-302)||(17850502-17850663)
chr6 (140-302)||(20736610-20736773)
chr6 (18-66)||(13359512-13359560)
chr6 (18-66)||(16566563-16566611)
chr6 (8-66)||(189221-189282)
chr6 (140-217)||(28605854-28605931)
[»] scaffold0657 (2 HSPs)
scaffold0657 (102-302)||(993-1193)
scaffold0657 (9-66)||(900-957)
[»] scaffold0390 (4 HSPs)
scaffold0390 (102-302)||(6941-7141)
scaffold0390 (102-302)||(13957-14157)
scaffold0390 (10-66)||(7177-7233)
scaffold0390 (10-66)||(14193-14249)
[»] chr8 (18 HSPs)
chr8 (102-302)||(21940665-21940865)
chr8 (104-302)||(28554885-28555083)
chr8 (104-302)||(22171491-22171687)
chr8 (108-301)||(6094129-6094322)
chr8 (108-302)||(24642655-24642849)
chr8 (108-235)||(24636860-24636987)
chr8 (114-302)||(38232384-38232570)
chr8 (132-293)||(32872857-32873019)
chr8 (9-66)||(22070107-22070164)
chr8 (10-66)||(21940573-21940629)
chr8 (10-59)||(24642556-24642605)
chr8 (10-66)||(6094031-6094087)
chr8 (10-66)||(22171396-22171452)
chr8 (10-66)||(28554791-28554847)
chr8 (140-203)||(10920234-10920297)
chr8 (123-181)||(2375027-2375085)
chr8 (224-302)||(14983927-14984004)
chr8 (10-47)||(24636605-24636642)
[»] chr2 (11 HSPs)
chr2 (102-298)||(21330259-21330455)
chr2 (102-302)||(18796506-18796706)
chr2 (104-300)||(18619807-18620002)
chr2 (108-247)||(19692598-19692737)
chr2 (166-294)||(20977956-20978084)
chr2 (136-302)||(36270199-36270366)
chr2 (9-66)||(21330493-21330550)
chr2 (136-294)||(18822115-18822275)
chr2 (222-302)||(18852066-18852146)
chr2 (10-66)||(19692773-19692829)
chr2 (138-293)||(36802664-36802820)
[»] scaffold0220 (2 HSPs)
scaffold0220 (102-302)||(18288-18488)
scaffold0220 (10-66)||(18196-18252)
[»] scaffold0186 (2 HSPs)
scaffold0186 (102-302)||(25997-26197)
scaffold0186 (10-65)||(26231-26286)
[»] scaffold0063 (2 HSPs)
scaffold0063 (104-302)||(5531-5729)
scaffold0063 (18-66)||(5444-5492)
[»] scaffold0008 (2 HSPs)
scaffold0008 (104-285)||(230365-230545)
scaffold0008 (10-66)||(230584-230640)
[»] scaffold0176 (2 HSPs)
scaffold0176 (102-165)||(8447-8510)
scaffold0176 (10-66)||(8546-8602)
[»] scaffold0203 (1 HSPs)
scaffold0203 (10-66)||(23769-23825)
[»] scaffold0326 (2 HSPs)
scaffold0326 (10-58)||(16523-16571)
scaffold0326 (102-135)||(16615-16648)
[»] scaffold0705 (1 HSPs)
scaffold0705 (10-66)||(41-97)
[»] scaffold0637 (1 HSPs)
scaffold0637 (10-66)||(8944-9000)
[»] scaffold0767 (1 HSPs)
scaffold0767 (5-46)||(1-42)
[»] scaffold0565 (2 HSPs)
scaffold0565 (12-66)||(10202-10256)
scaffold0565 (121-152)||(10127-10158)
[»] scaffold0170 (1 HSPs)
scaffold0170 (10-59)||(5878-5927)
[»] scaffold0032 (1 HSPs)
scaffold0032 (131-203)||(92194-92267)


Alignment Details
Target: scaffold0433 (Bit Score: 185; Significance: 1e-100; HSPs: 2)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 102 - 302
Target Start/End: Original strand, 7107 - 7307
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  7107 acaaggtatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatagaacattaagtataacttaattgtgag 7206  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7207 accccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 7306  T
Q  302 c 302  Q
    |    
T  7307 c 7307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 7015 - 7071
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7015 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 7071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 185; Significance: 1e-100; HSPs: 4)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 102 - 302
Target Start/End: Complemental strand, 2528 - 2328
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  2528 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 2429  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2428 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 2329  T
Q  302 c 302  Q
    |    
T  2328 c 2328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 102 - 302
Target Start/End: Complemental strand, 11419 - 11219
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11419 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 11320  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11220  T
Q  302 c 302  Q
    |    
T  11219 c 11219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 2620 - 2564
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2620 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 2564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 11511 - 11455
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11511 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 11455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 102 - 302
Target Start/End: Original strand, 29327784 - 29327984
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29327784 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgag 29327883  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29327884 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29327983  T
Q  302 c 302  Q
    |    
T  29327984 c 29327984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 102 - 302
Target Start/End: Complemental strand, 11536269 - 11536069
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  11536269 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtacaacttaattgtgag 11536170  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||||||||||||||| ||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11536169 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11536070  T
Q  302 c 302  Q
    |    
T  11536069 c 11536069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 102 - 302
Target Start/End: Complemental strand, 11543187 - 11542987
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  11543187 acaatgcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtcag 11543088  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||||||||||||||| ||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11543087 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11542988  T
Q  302 c 302  Q
    |    
T  11542987 c 11542987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 104 - 302
Target Start/End: Original strand, 18561009 - 18561207
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18561009 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaactgtgagac 18561108  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    ||| |||||||| | ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  18561109 cccgttaaacattaggaaactattcttaaagtatctgtagtcaagctttattgagaggtgggatatcattaaagcatagagactattatgtgggtagac 18561207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 104 - 302
Target Start/End: Original strand, 15148144 - 15148342
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||| || |||||||||||||||||||||||||||||    
T  15148144 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttgattgaacattaagtataacttaattgtgagac 15148243  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    ||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15148244 cccgttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 15148342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 104 - 302
Target Start/End: Original strand, 15152445 - 15152643
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15152445 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 15152544  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    ||| |||||||||  ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15152545 cccgttaaacatacggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 15152643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 108 - 302
Target Start/End: Original strand, 12738542 - 12738736
Alignment:
Q  108 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 207  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||       
T  12738542 catttctttattgattttattttgtttcaaaataataaagtccctagaatagttagtttgtttaatgaaacattaattataacttaattgtgagaccttg 12738641  T
Q  208 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12738642 ttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagac 12738736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 104 - 294
Target Start/End: Original strand, 12750828 - 12751018
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  12750828 aaggcatttctttattgattttgttttgtttcaaagtaataaagtccctagaatagttagtccgtttaatgaaacattaagtataacttaattgtgagac 12750927  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 294  Q
    | | |||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  12750928 ctcgttaaacataaagaaactattcttaaagtatccgtagtcaagctttattgagaagttggatatcattaaagcatagagactattatgt 12751018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 104 - 294
Target Start/End: Complemental strand, 18258047 - 18257857
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  18258047 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtctgtttaatggaacattaagtatgacttaattgtgagac 18257948  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 294  Q
    ||||||||||| || || | |||||| |||||||| ||||||||| ||| |||  |||| ||||| || ||| ||||| ||||||||||||    
T  18257947 cccattaaacacaaggacattattcttaaagtatccgtagtcaagtttttttgttaagtaggataacaataatgcataaagactattatgt 18257857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 108 - 290
Target Start/End: Original strand, 13392157 - 13392338
Alignment:
Q  108 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 207  Q
    ||||||||| |||| |||||||||||||||||||||||||| ||||||| | |||||||| |||||||| |||||||| | ||||||| |||||| ||||    
T  13392157 catttctttgttgactttgttttgtttcaaaataataaagttcctagaacaattagtctgcttaatggagcattaagtgtgacttaatcgtgaga-ccca 13392255  T
Q  208 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatt 290  Q
    |||||   || || | |||||| ||||||||  ||||||| |||||||| |||  |||||| ||||||| |||||||||||||    
T  13392256 ttaaatgaaaggacattattcttaaagtatcaatagtcaaactttattgtgaaaagggataacattaaaacatagagactatt 13392338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 124 - 294
Target Start/End: Original strand, 2364917 - 2365086
Alignment:
Q  124 ttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaaac 223  Q
    ||||| |||||||||||||||||||| |||||||| ||||||| | |||||||||||||||| |  |||||| |||||| ||||||||||  ||||| |     
T  2364917 ttgttatgtttcaaaataataaagtctctagaataattagtctttctaatggaacattaagtgtggcttaatcgtgagaacccattaaactaaatgacat 2365016  T
Q  224 tattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 294  Q
    |||||| ||| |||  |||||||| | |||||| ||| || |||| ||||||| |||||||||||| ||||    
T  2365017 tattcttaaaatattcgtagtcaa-ccttattgtgaaatgagataacattaaaacatagagactatcatgt 2365086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 2653332 - 2653275
Alignment:
Q  9 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  2653332 atgttggaataagccctaatagccaatctatattgattgggattggctttgtatcatg 2653275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 12738442 - 12738499
Alignment:
Q  9 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12738442 atgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 12738499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 135 - 294
Target Start/End: Original strand, 7396221 - 7396381
Alignment:
Q  135 caaaataataaagtccctagaatagttagtctgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataatgaaactattctaaaa 233  Q
    |||||||| || ||| ||||||||||||||   ||||| ||||||||||||||| |||||||  |||||||| |||||||||||  ||| |||||| |||    
T  7396221 caaaataaaaatgtcgctagaatagttagttcatttaaatggaacattaagtatgacttaatcttgagaccctattaaacataagaaaattattcttaaa 7396320  T
Q  234 gtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 294  Q
      || ||||||||||| ||| || ||| |  |||   ||||||||||||||||||||||||    
T  7396321 acatatgtagtcaagccttagtgtgaaatacgatgatattaaagcatagagactattatgt 7396381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 11543279 - 11543223
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  11543279 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 11543223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 39111819 - 39111905
Alignment:
Q  108 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaat 195  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||||  |||| |||||||| |||||||||||  |||||||    
T  39111819 catttctttattaattttgttttatttcaaaa-aataaagtccctagaatagcgagtccgtttaatgaaacattaagtacgacttaat 39111905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 11536361 - 11536305
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||    
T  11536361 tgttggaataagccctaatagccactctatattgattggttttggctttgtatcatg 11536305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 12750733 - 12750789
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  12750733 tgttggagtaagccctaatagctaatctatattgattgggtttggctttgtatcatg 12750789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 15152350 - 15152406
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  15152350 tgttggagtaagccctaatagccaatctatattgattgggtttggttttgtatcatg 15152406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 29327690 - 29327745
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcat 65  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||    
T  29327690 tgttggagtaagccctaatagccaatctatattgattgggtttggttttgtatcat 29327745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 15148049 - 15148105
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||| |||| ||||||    
T  15148049 tgttggagtaagccctaatagccaatctatattaattgggtttggttttgtatcatg 15148105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 3132748 - 3132789
Alignment:
Q  176 aacattaagtataacttaattgtgagaccccattaaacataa 217  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  3132748 aacattaagtgtaacttaattgtgagaccccattaaacataa 3132789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 251
Target Start/End: Original strand, 10234179 - 10234278
Alignment:
Q  152 tagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaaactattctaaaagtatctgtagtcaagctt 251  Q
    |||||||||||||| |||||||| | |||||| |||||||||||  |||||  ||||||||||||| || |||| | | ||| ||  |||||||||||||    
T  10234179 tagaatagttagtccgtttaatgaaccattaaatataacttaatcatgagattccattaaacataaagacactaatattaaaataaatgtagtcaagctt 10234278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 13392030 - 13392085
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcat 65  Q
    ||||||| |||||||||||| ||||||||||||||||| ||||| ||||| |||||    
T  13392030 tgttggagtaagccctaatatccaatctatattgattgtgtttgactttgtatcat 13392085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 134
Target Start/End: Complemental strand, 2653239 - 2653207
Alignment:
Q  102 acaaggcatttctttattgattttgttttgttt 134  Q
    |||||||||||||||||||||||||||||||||    
T  2653239 acaaggcatttctttattgattttgttttgttt 2653207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 18258143 - 18258087
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||| |||||||| |||||||||||| ||||||||| |||||| ||| ||||||    
T  18258143 tgttggagtaagccctgatagccaatctagattgattggttttggccttgtatcatg 18258087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 29982995 - 29983045
Alignment:
Q  131 gtttcaaaataataaagtccctagaatagttagtctgtttaatggaacatt 181  Q
    |||||||| ||||||||||  ||||| ||||| ||||||||||||||||||    
T  29982995 gtttcaaagtaataaagtctttagaacagttaatctgtttaatggaacatt 29983045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 102 - 302
Target Start/End: Complemental strand, 24695673 - 24695473
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24695673 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 24695574  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  24695573 accccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgagatatcaataaagcatagagactattatgtaggtaga 24695474  T
Q  302 c 302  Q
    |    
T  24695473 c 24695473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 102 - 302
Target Start/End: Complemental strand, 18570070 - 18569870
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  18570070 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaattgaacattaagtataacttaattgtgag 18569971  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    ||||| |||||||||| ||||||| ||| |||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||    
T  18569970 accccgttaaacataaggaaactactcttaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcataaagactattatgttggtaga 18569871  T
Q  302 c 302  Q
    |    
T  18569870 c 18569870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 104 - 302
Target Start/End: Complemental strand, 19714703 - 19714505
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19714703 aaggcatttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 19714604  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    ||| |||||||||| ||| ||||||| ||| |||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  19714603 cccgttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagac 19714505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 108 - 302
Target Start/End: Complemental strand, 19707419 - 19707225
Alignment:
Q  108 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 207  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  19707419 catttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgagaccccg 19707320  T
Q  208 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    |||||||||| ||| ||||||| ||| |||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  19707319 ttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagac 19707225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 107 - 290
Target Start/End: Complemental strand, 27347679 - 27347497
Alignment:
Q  107 gcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccc 206  Q
    |||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||| ||||||||||||| |||||||| | ||||||| |||||| |||    
T  27347679 gcatttctttgttgattttgttttgattcaaaataataaagtccttagaataattaatctgtttaatggagcattaagtgtgacttaatcgtgaga-ccc 27347581  T
Q  207 attaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatt 290  Q
    |||||||  || || | |||||| ||||||| |||||||||||||||||| |||  |||||| |||||||||||||||||||||    
T  27347580 attaaacgaaaggacattattcttaaagtatatgtagtcaagctttattgtgaaaagggataacattaaagcatagagactatt 27347497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 108 - 294
Target Start/End: Complemental strand, 22547217 - 22547031
Alignment:
Q  108 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 207  Q
    ||||| |||||| |||||||||| ||| |||||||||||  | ||| ||||||||||| ||||||||||||||||||||||||||||| |||||| | ||    
T  22547217 catttatttattcattttgttttattttaaaataataaaaccgctataatagttagtcggtttaatggaacattaagtataacttaatcgtgagatctca 22547118  T
Q  208 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 294  Q
    ||||| |||  || | |||| | |||||||  | |||||| |||||||| |||||| |||| |||||||  ||||||||||||||||    
T  22547117 ttaaatatatggacattatttttaaagtattcgcagtcaaactttattgtgaagtgagataacattaaaatatagagactattatgt 22547031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 106 - 287
Target Start/End: Complemental strand, 17285935 - 17285754
Alignment:
Q  106 ggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccc 205  Q
    ||||||| ||||||||||||||| ||||||||||||||||  |||  ||||||||||||||||||||||||||||||||| | ||||||| |||| ||||    
T  17285935 ggcatttatttattgattttgttatgtttcaaaataataatctccagagaatagttagtctgtttaatggaacattaagtgtgacttaatcgtgaaaccc 17285836  T
Q  206 cattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagact 287  Q
     | |||||  ||||| | |||||| |||||||   ||||| | |||||||| ||| |||||||  ||||||||||| |||||    
T  17285835 tagtaaactaaatgacattattcttaaagtattcatagtcgatctttattgtgaattgggatagtattaaagcatatagact 17285754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 39537962 - 39538071
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    ||||| |||||||||| ||||||||||||||||||||||  | |||||| |||||||||| ||  |||||||||||||||||||||||||||||||||||    
T  39537962 acaagccatttctttaatgattttgttttgtttcaaaatggttaagtccttagaatagttggttcgtttaatggaacattaagtataacttaattgtgag 39538061  T
Q  202 accccattaa 211  Q
    ||| ||||||    
T  39538062 acctcattaa 39538071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 302
Target Start/End: Complemental strand, 18807175 - 18807041
Alignment:
Q  168 tttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaa-actattctaaaagtatctgtagtcaagctttattgagaagtggga 266  Q
    |||||||||||||||||| | ||||||| ||||||| |||||||| |||||| | | |||||| ||||||||| ||||||||| |||||| |||||  ||    
T  18807175 tttaatggaacattaagtgtgacttaatcgtgagacaccattaaa-ataatggacattattcttaaagtatctatagtcaagcgttattgtgaagtaaga 18807077  T
Q  267 tatcattaaagcatagagactattatgtaggtagac 302  Q
    || || |||||||||||||||||||||  |||||||    
T  18807076 taacaataaagcatagagactattatgcgggtagac 18807041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 106 - 287
Target Start/End: Complemental strand, 17299088 - 17298907
Alignment:
Q  106 ggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccc 205  Q
    ||||||| ||||||||||||||| |||||  |||||||||  |||  ||||||||||||| | |||||||||||||||||   ||||||| |||| ||||    
T  17299088 ggcatttatttattgattttgttatgtttataaataataatatccagagaatagttagtccgattaatggaacattaagtgcgacttaatcgtgaaaccc 17298989  T
Q  206 cattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagact 287  Q
     | |||||  ||||| | |||||| |||||||   ||||| | ||||||||  ||||||||||  ||||||||||| |||||    
T  17298988 tagtaaactaaatgacattattcttaaagtattcatagtcgatctttattgttaagtgggatagtattaaagcatatagact 17298907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 24695765 - 24695709
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24695765 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 24695709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 31886537 - 31886640
Alignment:
Q  108 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 207  Q
    |||||||||| |||||||||||||||||||| ||||||||||| ||||||| |||||   |||||| |||||| |||||  ||||||| ||||||| |||    
T  31886537 catttctttagtgattttgttttgtttcaaattaataaagtccttagaataattagttcatttaattgaacatcaagtacgacttaatcgtgagactcca 31886636  T
Q  208 ttaa 211  Q
    ||||    
T  31886637 ttaa 31886640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 19714798 - 19714742
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19714798 tgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 19714742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 19707518 - 19707462
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  19707518 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 19707462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 27347778 - 27347722
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  27347778 tgttggagtaagccctaatagccaatctatattgattgcgtttggctttgtatcatg 27347722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 302
Target Start/End: Original strand, 39538708 - 39538788
Alignment:
Q  222 actattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    |||||||| ||| ||||  |||| ||||||||||| |||||||||||||||||||||||  |||||||||||| |||||||    
T  39538708 actattcttaaaatatccatagttaagctttattgtgaagtgggatatcattaaagcatgaagactattatgtgggtagac 39538788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 128 - 217
Target Start/End: Complemental strand, 33477479 - 33477390
Alignment:
Q  128 tttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataa 217  Q
    ||||||||||||||||||||||| || ||||||||| ||| |||||||| |||||||| | |  |||| |||||||| |||||| |||||    
T  33477479 tttgtttcaaaataataaagtccttacaatagttaggctgattaatggatcattaagtgtgatctaatcgtgagacctcattaatcataa 33477390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 18570156 - 18570108
Alignment:
Q  18 taagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||| |||||||| |||||||||| |||||||||||||||| ||||||    
T  18570156 taagctctaatagctaatctatattaattgggtttggctttgtatcatg 18570108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 39537870 - 39537925
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcat 65  Q
    ||||||| |||||||||||||||||||||| |||| || |||| |||||| |||||    
T  39537870 tgttggattaagccctaatagccaatctatgttgactgagtttagctttgtatcat 39537925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 11479420 - 11479486
Alignment:
Q  152 tagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccc-cattaaacataa 217  Q
    ||||||| ||||| ||||||||| || ||||||| | |||| |||||||||||| ||||||||||||    
T  11479420 tagaataattagtgtgtttaatgaaatattaagtgtgacttgattgtgagaccctcattaaacataa 11479486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 185; Significance: 1e-100; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 102 - 302
Target Start/End: Complemental strand, 19926967 - 19926767
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19926967 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 19926868  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926867 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 19926768  T
Q  302 c 302  Q
    |    
T  19926767 c 19926767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 102 - 302
Target Start/End: Complemental strand, 10621540 - 10621340
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  10621540 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10621441  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    | |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10621440 agcccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 10621341  T
Q  302 c 302  Q
    |    
T  10621340 c 10621340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 102 - 302
Target Start/End: Original strand, 26970463 - 26970663
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26970463 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 26970562  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970563 accccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 26970662  T
Q  302 c 302  Q
    |    
T  26970663 c 26970663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 102 - 302
Target Start/End: Original strand, 55612683 - 55612883
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  55612683 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 55612782  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||||||||||||||| ||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612783 accccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 55612882  T
Q  302 c 302  Q
    |    
T  55612883 c 55612883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 102 - 302
Target Start/End: Original strand, 5707320 - 5707520
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  5707320 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 5707419  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5707420 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 5707519  T
Q  302 c 302  Q
    |    
T  5707520 c 5707520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 102 - 302
Target Start/End: Complemental strand, 10628619 - 10628419
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  10628619 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10628520  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    | |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10628519 agcccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatattattaaagcatagagactattatgtaggtaga 10628420  T
Q  302 c 302  Q
    |    
T  10628419 c 10628419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 102 - 302
Target Start/End: Original strand, 26963640 - 26963840
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  26963640 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaaatataacttaattgtgag 26963739  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963740 accccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 26963839  T
Q  302 c 302  Q
    |    
T  26963840 c 26963840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 104 - 302
Target Start/End: Complemental strand, 28393339 - 28393141
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28393339 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28393240  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  28393239 cccattaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagac 28393141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 102 - 302
Target Start/End: Original strand, 5713948 - 5714148
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||    
T  5713948 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagcccatttaatggaacattaagtataacttaattgtgag 5714047  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5714048 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 5714147  T
Q  302 c 302  Q
    |    
T  5714148 c 5714148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 102 - 302
Target Start/End: Original strand, 868597 - 868797
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  868597 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 868696  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    ||||| |||||||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  868697 accccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 868796  T
Q  302 c 302  Q
    |    
T  868797 c 868797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 104 - 302
Target Start/End: Original strand, 18262214 - 18262412
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18262214 aaggcatttctttattgattttgtttcgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18262313  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    ||| |||||||||| ||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262314 cccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagac 18262412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 104 - 302
Target Start/End: Complemental strand, 4426808 - 4426611
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4426808 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 4426709  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    ||| |||||||||| | ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4426708 cccgttaaacataa-ggaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagac 4426611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 104 - 302
Target Start/End: Original strand, 18269070 - 18269273
Alignment:
Q  104 aaggcatttctttattgatttt-----gttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgt 198  Q
    ||||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18269070 aaggcatttctttattgattttgttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgt 18269169  T
Q  199 gagaccccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggt 298  Q
    |||||||| |||||||||| ||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  18269170 gagaccccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggt 18269269  T
Q  299 agac 302  Q
    ||||    
T  18269270 agac 18269273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 114 - 300
Target Start/End: Original strand, 8845215 - 8845401
Alignment:
Q  114 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaac 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||    
T  8845215 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8845314  T
Q  214 ataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtag 300  Q
    |||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  8845315 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtag 8845401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 114 - 300
Target Start/End: Original strand, 8858179 - 8858365
Alignment:
Q  114 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaac 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||    
T  8858179 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8858278  T
Q  214 ataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtag 300  Q
    |||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  8858279 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtag 8858365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 102 - 217
Target Start/End: Original strand, 12357136 - 12357251
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12357136 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 12357235  T
Q  202 accccattaaacataa 217  Q
    ||||||||||||||||    
T  12357236 accccattaaacataa 12357251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 110 - 301
Target Start/End: Original strand, 20311299 - 20311491
Alignment:
Q  110 tttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaag-tataacttaattgtgagaccccat 208  Q
    ||||||||||||||||||||||||| ||||||||||||| | || |||||||| | |||| |||||| ||||||| ||||||||||||||||||||||||    
T  20311299 tttctttattgattttgttttgttttaaaataataaagtacttataatagttaatatgttcaatggagcattaaggtataacttaattgtgagaccccat 20311398  T
Q  209 taaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    ||||||||| || ||| || | ||||||| ||| |||||||||||||| |||||| |||||||||||||||||||||||||| ||| ||||||    
T  20311399 taaacataaggacactgtttttaaagtatttgttgtcaagctttattgtgaagtgagatatcattaaagcatagagactattttgtgggtaga 20311491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 108 - 294
Target Start/End: Complemental strand, 5668327 - 5668140
Alignment:
Q  108 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 207  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||| |||||||| | | ||||| |||||| ||||    
T  5668327 catttctttgttgattttgttttgtttcaaaataataaagtctctagaataattagtctatttaatggagcattaagtgtgatttaatcgtgaga-ccca 5668229  T
Q  208 ttaaacataatgaaactattctaaaag--tatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 294  Q
    |||||   || || | |||||| ||||  ||| |||||||||||||||||| |||  | |||| ||||||| |||||||||||||||||    
T  5668228 ttaaatgaaaggacattattcttaaagtatatttgtagtcaagctttattgtgaaaagagataacattaaatcatagagactattatgt 5668140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 108 - 302
Target Start/End: Complemental strand, 10677753 - 10677562
Alignment:
Q  108 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 207  Q
    ||||| |||||||||||| ||||||||||| | ||||||| ||||| |||| ||||||||| ||||||| |||||||||| ||||||| | |||| ||||    
T  10677753 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-ccca 10677655  T
Q  208 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    ||||||  ||||| | |||||| |||||||| ||||||||||||||  | ||| || |||| |||||||| ||| |||||||||||| |||||||    
T  10677654 ttaaacgaaatgatattattcttaaagtatccgtagtcaagcttta--gtgaaatgagataacattaaagtatatagactattatgtgggtagac 10677562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 108 - 302
Target Start/End: Complemental strand, 10891393 - 10891202
Alignment:
Q  108 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 207  Q
    ||||| |||||||||||| ||||||||||| | ||||||| ||||| |||| ||||||||| ||||||| |||||||||| ||||||| | |||| ||||    
T  10891393 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-ccca 10891295  T
Q  208 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    ||||||  ||||| | |||||| |||||||| ||||||||||||||  | ||| || |||| |||||||| ||| |||||||||||| |||||||    
T  10891294 ttaaacgaaatgatattattcttaaagtatccgtagtcaagcttta--gtgaaatgagataacattaaagtatatagactattatgtgggtagac 10891202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 104 - 301
Target Start/End: Original strand, 5616215 - 5616414
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||| |||| ||||||| |||  ||||||||||||| | ||| |||  |||||     
T  5616215 aaggcatttctttattcattttgttttgtttcaaaataataaagttcctaaaataattagtctatttcttggaacattaagtctgactaaatcatgagat 5616314  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaa--gctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    ||| ||||||   | || | |||||| |||||||| || |||||  | ||||||  ||| |||||||| | |||||||| |||||||||||||| |||||    
T  5616315 cccgttaaactagaggacattattcttaaagtatccgttgtcaaaggttttattatgaattgggatattaataaagcattgagactattatgtatgtaga 5616414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 108 - 302
Target Start/End: Original strand, 35223576 - 35223760
Alignment:
Q  108 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 207  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||| | ||||||| || |           
T  35223576 catttctttgttgattttgttttgttttaaaataataaagtccctagaataattagtctgtttaatggagcattaagtgtgacttaatcgtaa------- 35223668  T
Q  208 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
       |||  || || | |||||| |||||||  |||||||||||||||||  ||   ||||| |||||||||||| |||||||||||| |||||||    
T  35223669 ---aacgaaaggacattattcttaaagtattcgtagtcaagctttattgtaaaaaaggataacattaaagcatatagactattatgtgggtagac 35223760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 19927060 - 19927003
Alignment:
Q  9 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19927060 atgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 19927003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 5713856 - 5713912
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5713856 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 5713912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 26963548 - 26963604
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26963548 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26963604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 26970371 - 26970427
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26970371 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26970427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 128 - 294
Target Start/End: Complemental strand, 21454319 - 21454152
Alignment:
Q  128 tttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacatt-aagtataacttaattgtgagaccccattaaacataatgaaactat 226  Q
    ||||||||||| ||||||||| | ||||||||||||| || ||||||||||||| || | | |||||||  ||||||||||||||  ||||||| | |||    
T  21454319 tttgtttcaaagtaataaagttcttagaatagttagtttgattaatggaacattaaaatgtgacttaatattgagaccccattaattataatgacattat 21454220  T
Q  227 tctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 294  Q
    | | ||| ||||| ||||||| |||||||| ||| || |||| || ||| ||||| ||| ||||||||    
T  21454219 ttttaaaatatctatagtcaaactttattgtgaaatgagataacaataatgcataaagattattatgt 21454152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 5707228 - 5707284
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  5707228 tgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 5707284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 10621632 - 10621576
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  10621632 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 10621576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 12357044 - 12357100
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  12357044 tgttggaataagccctaatagccaatctatattgattggatttggctttgtatcatg 12357100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 868507 - 868561
Alignment:
Q  12 ttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  868507 ttggaataaaccctaatagccaatctatattgattgggtttggctttgtatcatg 868561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 17142429 - 17142372
Alignment:
Q  9 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  17142429 atgttggaaaaagccctaatagccaatctatattgattgggtttgactttgtatcatg 17142372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 10628711 - 10628655
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||    
T  10628711 tgttggaataagccctaatagccaatctatattgattggttttgactttgtatcatg 10628655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 55612594 - 55612650
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  55612594 tgttagaataagccctaataaccaatctatattgattgggtttggctttgtatcatg 55612650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 4426905 - 4426847
Alignment:
Q  8 aatgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||| || ||||||    
T  4426905 aatgttggagtaagtcctaatagccaatctatattgattgggtttggctctgtatcatg 4426847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 28393434 - 28393380
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatca 64  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||    
T  28393434 tgttggagtaagccctaatagccaatctatattgattgggtttgactttgtatca 28393380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 18268976 - 18269032
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||||| ||||||    
T  18268976 tgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 18269032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 301
Target Start/End: Original strand, 56516094 - 56516255
Alignment:
Q  140 taataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaa-actattctaaaagtatc 238  Q
    ||||||||||| |||||||| | ||  |  ||||| |||||||| | | |||||||||||||||  |||||| ||||  ||| | ||||||  |||||||    
T  56516094 taataaagtccttagaatagatggttagagtaatgaaacattaattgtgacttaattgtgagacttcattaa-catatagaacattattcttgaagtatc 56516192  T
Q  239 tgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    | |||||||||||||||| |||    ||||  |||||| ||||||||||||||||||||||||    
T  56516193 tatagtcaagctttattgtgaataacgatagtattaaaacatagagactattatgtaggtaga 56516255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 217
Target Start/End: Complemental strand, 39074346 - 39074279
Alignment:
Q  151 ctagaatagttagtctgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataa 217  Q
    |||||||| |||||| |||||| | ||||||||||||| |||||||  ||||||||||||||||||||    
T  39074346 ctagaataattagtccgtttaaattgaacattaagtatgacttaatcatgagaccccattaaacataa 39074279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 55992680 - 55992729
Alignment:
Q  17 ataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||||||||||||||| | ||||||||||||||| ||||| ||||||    
T  55992680 ataagccctaatagccaatttgtattgattgggtttgactttgtatcatg 55992729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 211
Target Start/End: Complemental strand, 11161972 - 11161913
Alignment:
Q  152 tagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaa 211  Q
    ||||||||||| || |||||||||||||  |||| | ||||||||||||||| |||||||    
T  11161972 tagaatagttaatcagtttaatggaacacaaagtgtgacttaattgtgagactccattaa 11161913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 291
Target Start/End: Complemental strand, 39074269 - 39074218
Alignment:
Q  240 gtagtcaagctttattgagaagtgggatatcattaaagcatagagactatta 291  Q
    |||||||  |||||||| |||||| |||||||||||||||| ||||||||||    
T  39074269 gtagtcatactttattgtgaagtgagatatcattaaagcatggagactatta 39074218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 5668412 - 5668371
Alignment:
Q  25 taatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||||||||||||||||||| |||||| |||| ||||||    
T  5668412 taatagccaatctatattgattgtgtttggttttgtatcatg 5668371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 8845118 - 8845166
Alignment:
Q  18 taagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||| ||||||||||||||||| ||||||| ||||| ||||| ||||||    
T  8845118 taagtcctaatagccaatctatgttgattgagtttgactttgtatcatg 8845166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 8858082 - 8858130
Alignment:
Q  18 taagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||| ||||||||||||||||| ||||||| ||||| ||||| ||||||    
T  8858082 taagtcctaatagccaatctatgttgattgagtttgactttgtatcatg 8858130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 18262136 - 18262176
Alignment:
Q  26 aatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||||||||||||| |||| |||||||||||||| ||||||    
T  18262136 aatagccaatctatgttgaatgggtttggctttgtatcatg 18262176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 102 - 302
Target Start/End: Original strand, 18252030 - 18252230
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18252030 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 18252129  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252130 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 18252229  T
Q  302 c 302  Q
    |    
T  18252230 c 18252230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 102 - 302
Target Start/End: Complemental strand, 27131616 - 27131416
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27131616 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27131517  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27131516 accccattaaacataaggaaactattctcaaagtatttgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtaga 27131417  T
Q  302 c 302  Q
    |    
T  27131416 c 27131416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 102 - 302
Target Start/End: Complemental strand, 18532721 - 18532521
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  18532721 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagttcgtttaatggaacattaagtataacttaattgtgag 18532622  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18532621 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtagataga 18532522  T
Q  302 c 302  Q
    |    
T  18532521 c 18532521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 104 - 302
Target Start/End: Complemental strand, 16359240 - 16359042
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16359240 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagaataacttaattgtgagac 16359141  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    ||| |||||||||| ||||||||||| |||||| |  |||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||    
T  16359140 cccgttaaacataaggaaactattcttaaagtaaccctagtcaagctttattgagaaatggaatatcattaaagcatagagactattatgtgggtagac 16359042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 104 - 302
Target Start/End: Complemental strand, 27310782 - 27310584
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27310782 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 27310683  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    | | || ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  27310682 cacgttgaacataaggaaactattcttaaagtatcagtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtgggtagac 27310584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 104 - 302
Target Start/End: Complemental strand, 21171438 - 21171240
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||| |||||||||||||||||||    
T  21171438 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttcatggaacattaaatataacttaattgtgagac 21171339  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    ||| || ||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  21171338 cccgttgaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagac 21171240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 108 - 294
Target Start/End: Complemental strand, 36816834 - 36816648
Alignment:
Q  108 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 207  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||     
T  36816834 catttctttattgattttgttttgtttcaaaataatgaagtccctagaatagttcgtctgtttaatggaacattaagtataaattaattgtgagactccg 36816735  T
Q  208 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 294  Q
    |||||||||| || | |||||| ||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  36816734 ttaaacataaggacattattcttaaagtatccatagtcaagctttattgagaagtgggataccattaaagcatagagactattatgt 36816648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 102 - 302
Target Start/End: Complemental strand, 3856126 - 3855926
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    ||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  3856126 acaaggcatttctttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagcccgtttaatggaacattaagtataacttaattgtgag 3856027  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||||||||||||||| || | |||||| ||| ||| ||||||||| |||||||| |||||||||||| |||||||||| |||||||||| || ||||||    
T  3856026 accccattaaacataaggacattattcttaaaatatttgtagtcaaactttattgtgaagtgggatattattaaagcatggagactattacgtgggtaga 3855927  T
Q  302 c 302  Q
    |    
T  3855926 c 3855926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 102 - 294
Target Start/End: Complemental strand, 22657429 - 22657236
Alignment:
Q  102 acaaggcatttctttattgatttt-gttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtga 200  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22657429 acaagacatttctttattgatttttgttttgtttcaaaataataaagttcctagaatagttagtctgtttaatggaacattaaatataacttaattgtga 22657330  T
Q  201 gaccccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 294  Q
    |||||| |||||||||| || || ||||| ||||| ||| |||||||||||||||  ||| || ||||||||||||||||||||||||| ||||    
T  22657329 gacccctttaaacataaggacacaattcttaaagtgtctctagtcaagctttattctgaaatgagatatcattaaagcatagagactatcatgt 22657236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 108 - 302
Target Start/End: Complemental strand, 27277756 - 27277564
Alignment:
Q  108 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 207  Q
    ||||||||| ||| |||||||||||||||||||||||| |||||||||||| ||||||  ||||| ||| ||||| || | ||||||| | ||||||       
T  27277756 catttctttgttgtttttgttttgtttcaaaataataacgtccctagaataattagtccatttaacggagcatta-gtgtgacttaatcgcgagacctt- 27277659  T
Q  208 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    |||| |  ||||| | |||||| |||||||| ||||||| ||||||||| |||  |||||| ||||||||||||||||||||||||| |||||||    
T  27277658 ttaaccgaaatgacattattcttaaagtatccgtagtcaggctttattgtgaaaagggataacattaaagcatagagactattatgtgggtagac 27277564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 136 - 294
Target Start/End: Complemental strand, 12006712 - 12006554
Alignment:
Q  136 aaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaaactattctaaaagt 235  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||| |  |||||| |||||||||||| |||||||| || | |||| | |||      
T  12006712 aaaataataaagtccctagaatagttagtctatttaatggaatattaagtgtgccttaatcgtgagaccccatgaaacataaggacattattattaaaac 12006613  T
Q  236 atctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 294  Q
    ||  |||||||||| ||| || |||| |||||| ||||||| | |||||| | ||||||    
T  12006612 attcgtagtcaagccttagtgtgaagagggataacattaaaacttagagattgttatgt 12006554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 301
Target Start/End: Complemental strand, 12014457 - 12014292
Alignment:
Q  136 aaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaaactattctaaaagt 235  Q
    |||||||||||||| ||||||||  ||||| ||||||||||| ||||||| ||| ||||| || ||| |||||||||||||||||   |||||| |||      
T  12014457 aaaataataaagtcactagaatacatagtccgtttaatggaatattaagtgtaaattaatcgttagatcccattaaacataatgatgttattcttaaaac 12014358  T
Q  236 atctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    ||| ||||| |||||||| || |||| ||||||  |||||||| || |||| ||||||| ||||||    
T  12014357 atccgtagttaagctttagtgtgaagagggatacgattaaagcgtaaagaccattatgtgggtaga 12014292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 300
Target Start/End: Complemental strand, 9918106 - 9917927
Alignment:
Q  114 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaac 213  Q
    |||||||||||||||||||| ||||||||||||||| ||       ||||| |||||||| |||||||||||||||||| ||   ||||  ||||||||     
T  9918106 tttattgattttgttttgttacaaaataataaagtcactt------ttagtttgtttaatcgaacattaagtataacttgatcacgaga-tccattaaat 9918014  T
Q  214 ataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtag 300  Q
    |||| || | |||||| ||| ||||| |||| |||||||||||  |||||||||| |||| ||||||||||| || ||||| |||||    
T  9918013 ataaggacattattcttaaaatatctatagttaagctttattgttaagtgggatagcattgaagcatagagaatactatgtcggtag 9917927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 18251935 - 18251992
Alignment:
Q  9 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18251935 atgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18251992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 18532814 - 18532757
Alignment:
Q  9 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18532814 atgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18532757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 27310877 - 27310821
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  27310877 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 27310821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 16359336 - 16359280
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||| |||||||||||||||||||||||||||||||||| || |||| ||||||    
T  16359336 tgttggagtaagccctaatagccaatctatattgattgggttaggatttgtatcatg 16359280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 3403248 - 3403325
Alignment:
Q  132 tttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccatt 209  Q
    ||||||| ||||||||||  || ||||||||||||| ||||||||| ||||||| | |||||| ||||||||| ||||    
T  3403248 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagaccacatt 3403325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 3443571 - 3443494
Alignment:
Q  132 tttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccatt 209  Q
    ||||||| ||||||||||  || ||||||||||||| ||||||||| ||||||| | |||||| ||||||||| ||||    
T  3443571 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagaccacatt 3443494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 21171535 - 21171479
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||| ||||| |||||||||||||||||| ||||| ||||||||||| ||||||    
T  21171535 tgttggagtaagctctaatagccaatctatatggattgagtttggctttgtatcatg 21171479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 22657521 - 22657472
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 59  Q
    ||||||| |||||| ||||||||||| ||||||||||| |||||||||||    
T  22657521 tgttggagtaagccttaatagccaatatatattgattgagtttggctttg 22657472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 30720694 - 30720625
Alignment:
Q  108 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaa 177  Q
    ||||| ||||||| |||| |||||||| ||||||||||||| ||| ||||| |||||  |||||||||||    
T  30720694 catttttttattggttttattttgttttaaaataataaagttcctggaataattagttcgtttaatggaa 30720625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 36816926 - 36816885
Alignment:
Q  18 taagccctaatagccaatctatattgattgggtttggctttg 59  Q
    ||||||||||||  ||||||||||||||||||||||||||||    
T  36816926 taagccctaatattcaatctatattgattgggtttggctttg 36816885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 3856220 - 3856164
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||| || |||||||||||||||| || ||||||||||||| ||||| ||||||    
T  3856220 tgttggagtaggccctaatagccaatccatcttgattgggtttgactttgtatcatg 3856164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 27131704 - 27131652
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||||||||||||||||||||||||||     ||||||||||||||| ||||||    
T  27131704 tgttggaataagccctaatagccaatctat----gttgggtttggctttgtatcatg 27131652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 27277856 - 27277800
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||| |||||||||||||||||||||| || |||  ||||| ||||| ||||||    
T  27277856 tgttggagtaagccctaatagccaatctatgttaattatgtttgactttgtatcatg 27277800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 181; Significance: 8e-98; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 102 - 302
Target Start/End: Original strand, 6110064 - 6110264
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6110064 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 6110163  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110164 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 6110263  T
Q  302 c 302  Q
    |    
T  6110264 c 6110264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 102 - 302
Target Start/End: Complemental strand, 10572799 - 10572599
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10572799 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10572700  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572699 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 10572600  T
Q  302 c 302  Q
    |    
T  10572599 c 10572599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 104 - 302
Target Start/End: Complemental strand, 16482688 - 16482490
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16482688 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16482589  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    |||||||||||||| ||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482588 cccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 16482490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 108 - 302
Target Start/End: Complemental strand, 17781319 - 17781125
Alignment:
Q  108 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17781319 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 17781220  T
Q  208 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    |||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 17781125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 104 - 302
Target Start/End: Original strand, 18522665 - 18522863
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18522665 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18522764  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    |||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18522765 cccattaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcatttaagcatagagactattatgtaggtagac 18522863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 102 - 302
Target Start/End: Complemental strand, 15601091 - 15600891
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15601091 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15600992  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15600991 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 15600892  T
Q  302 c 302  Q
    |    
T  15600891 c 15600891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 102 - 302
Target Start/End: Complemental strand, 15607636 - 15607436
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15607636 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15607537  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607536 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 15607437  T
Q  302 c 302  Q
    |    
T  15607436 c 15607436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 102 - 288
Target Start/End: Original strand, 8490488 - 8490674
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8490488 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 8490587  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagacta 288  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8490588 accccattaaacataaggaaactattctcaaagtatctgtagtcaagctttgttgagaagtgggatatcattaaagcatagagacta 8490674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 105 - 302
Target Start/End: Original strand, 13211305 - 13211502
Alignment:
Q  105 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13211305 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 13211404  T
Q  205 ccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    ||||||||||||| ||||||||||| |||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13211405 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagac 13211502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 102 - 302
Target Start/End: Original strand, 13248607 - 13248807
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13248607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 13248706  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||||||||||||||| ||||||||||| |||||||  ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13248707 accccattaaacataaggaaactattctcaaagtattcgtagtcaagctttgttgagaagtgggataacattaaagcatagagactattatgtaggtaga 13248806  T
Q  302 c 302  Q
    |    
T  13248807 c 13248807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 108 - 302
Target Start/End: Complemental strand, 19089946 - 19089752
Alignment:
Q  108 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  19089946 catttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgagacccct 19089847  T
Q  208 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19089846 ttaaacataatgaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaatcatagagactattatgtaggtagac 19089752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 102 - 302
Target Start/End: Complemental strand, 15357793 - 15357593
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  15357793 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgag 15357694  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||||||||||||||| ||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15357693 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtaga 15357594  T
Q  302 c 302  Q
    |    
T  15357593 c 15357593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 108 - 302
Target Start/End: Complemental strand, 10579556 - 10579362
Alignment:
Q  108 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  10579556 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgttaaatggaacattaagtataacttaattgtgagacccca 10579457  T
Q  208 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    |||||||||| ||||||||||| |||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10579456 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagac 10579362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 104 - 302
Target Start/End: Original strand, 13516813 - 13517011
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13516813 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttcatggaacattaagtataacttaattgtgagac 13516912  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    ||| |||||||||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  13516913 cccgttaaacataaggaaacgattcttaaagtatctgtagtcaagctttattgagaagtaggatatcattaaagcacagagactattatgtgggtagac 13517011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 104 - 302
Target Start/End: Original strand, 18519980 - 18520175
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18519980 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18520079  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    ||| |||||||||| ||||||||||| ||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18520080 cccgttaaacataaggaaactattcttaa---atccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 18520175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 104 - 302
Target Start/End: Complemental strand, 17200389 - 17200191
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||    
T  17200389 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgatac 17200290  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    ||| |||||||||||||||||||||| |||||||| ||||| |||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||    
T  17200289 ccctttaaacataatgaaactattcttaaagtatccgtagttaagctttattgagatgtgtgatatcattaaagcatagagactattatgtgggtagac 17200191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 108 - 302
Target Start/End: Complemental strand, 32057101 - 32056907
Alignment:
Q  108 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||     
T  32057101 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacatcaagtataactttattgtaagaccccg 32057002  T
Q  208 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    |||||||||| ||||||||||| ||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32057001 ttaaacataaagaaactattcttaaagtgtccgtagtcaaactttattgagaagtgggatatcattaaagcatagagactattatgtgggtagac 32056907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 121 - 302
Target Start/End: Complemental strand, 15342407 - 15342226
Alignment:
Q  121 attttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatga 220  Q
    ||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  15342407 attttgttttgtttcaaaataataaagtccctagaatagtttgttcgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 15342308  T
Q  221 aactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    | ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15342307 acctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtagac 15342226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 102 - 263
Target Start/End: Complemental strand, 18640953 - 18640792
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  18640953 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 18640854  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtg 263  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||    
T  18640853 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtg 18640792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 108 - 294
Target Start/End: Complemental strand, 1647726 - 1647536
Alignment:
Q  108 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagta----taacttaattgtgagac 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||    
T  1647726 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataattaacttaattgtgagac 1647627  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 294  Q
    ||| |||||||||| ||||||||| | |||||||| ||| |||||||||||||||||  ||||||| ||||||||||||||||||||||||    
T  1647626 cccgttaaacataaggaaactatttttaaagtatccgtaatcaagctttattgagaaaagggatataattaaagcatagagactattatgt 1647536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 102 - 294
Target Start/End: Original strand, 29924971 - 29925163
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||  ||||||||||| |||||||||||    
T  29924971 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29925070  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 294  Q
    ||||||||||| |||| || | |||||| ||| ||| |||||||||||||||||| |||||| |||||||||||||||| ||| |||||||||    
T  29925071 accccattaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgt 29925163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 102 - 294
Target Start/End: Original strand, 29974124 - 29974316
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||  ||||||||||| |||||||||||    
T  29974124 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29974223  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 294  Q
    ||||||||||| |||| || | |||||| ||| ||| |||||||||||||||||| |||||| |||||||||||||||| ||| |||||||||    
T  29974224 accccattaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgt 29974316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 104 - 290
Target Start/End: Original strand, 16200128 - 16200313
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||| |||||||||||||  |||||||||||||||| ||||||||||||||||||||    
T  16200128 aaggcatttcttcgttg-ttttattttgtttcaaaataataaagtccttagaatagttagttcgtttaatggaacattatgtataacttaattgtgagac 16200226  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatt 290  Q
    |||||||||||||| || | |||||| |||||||  ||||||||| ||||||| ||||||||||||||||||||||| |||||||||    
T  16200227 cccattaaacataaggacattattcttaaagtattcgtagtcaagatttattgtgaagtgggatatcattaaagcatggagactatt 16200313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 104 - 290
Target Start/End: Original strand, 16200434 - 16200619
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  16200434 aaggcatttcttcgttg-ttttattttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattatgtataacttaattgtgagac 16200532  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatt 290  Q
     ||| ||||||||| || | |||||| |||||||  ||||||||| ||||||| |||||||||| ||||||||||||  ||||||||    
T  16200533 tccaataaacataaggacattattcttaaagtattcgtagtcaagatttattgtgaagtgggatgtcattaaagcatgaagactatt 16200619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 109 - 302
Target Start/End: Complemental strand, 24253589 - 24253395
Alignment:
Q  109 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgaga-cccca 207  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||| | ||  |||| |||||||||||||||| ||||||| |||||| |||||    
T  24253589 atttctttattgattttgttttacttcaaaataataaagtccttagaatagctcgttcgtttgatggaacattaagtatgacttaatcgtgagatcccca 24253490  T
Q  208 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    | |||||||| || |||||||| ||||||| ||| |||||  |||||||  ||||| | || ||||||||||||||||||||||||| |||||||    
T  24253489 tcaaacataaggacactattcttaaagtatatgtggtcaaaatttattgtaaagtgaggtaacattaaagcatagagactattatgtcggtagac 24253395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 208 - 302
Target Start/End: Original strand, 17136465 - 17136559
Alignment:
Q  208 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    |||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  17136465 ttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtgggtagac 17136559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 18534758 - 18534819
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtc 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18534758 aaggcatttctttattgattttgttttgtttcaaaataataaagtccatagaatagttagtc 18534819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 6109972 - 6110028
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  6109972 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 6110028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 8490396 - 8490452
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8490396 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 8490452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 13248515 - 13248571
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13248515 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 13248571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 13211211 - 13211267
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  13211211 tgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 13211267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 18641045 - 18640989
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  18641045 tgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 18640989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 10579653 - 10579604
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10579653 tgttggaataagccctaatagccaatctatattgattgggtttgactttg 10579604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 18510924 - 18510969
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtc 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18510924 aaggcatttctttattgattttgttttgtttcaaaataataaagtc 18510969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 17136137 - 17136193
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  17136137 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 17136193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 10572890 - 10572841
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 59  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  10572890 tgttggaataagccctaatagccaacctatattgattgggtttgactttg 10572841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 15607729 - 15607672
Alignment:
Q  10 tgttggaataagccctaatagccaatctata-ttgattgggtttggctttgcatcatg 66  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||    
T  15607729 tgttggaataagccctaatagccaatctatattttattgggtttggctttgtatcatg 15607672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 17200483 - 17200434
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 59  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  17200483 tgttggagtaagccctaatagccaatctatgttgattgggtttggctttg 17200434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 15351293 - 15351237
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||||||||||||||||||||||||||| ||||||  |||||||||| ||||||    
T  15351293 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15351237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 15357885 - 15357829
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||||||||||||||||||||||||||| ||||||  |||||||||| ||||||    
T  15357885 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15357829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 16482782 - 16482727
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  16482782 tgttagaataagccctaata-ccaatctatattgattgggtttggctttgtatcatg 16482727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 18519885 - 18519941
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||| |||| |||||||||||||||||||||||||||||||| |||| ||||||    
T  18519885 tgttggagtaagtcctaatagccaatctatattgattgggtttggttttgtatcatg 18519941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 1647825 - 1647768
Alignment:
Q  9 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||||||| ||||||||||||||   ||||||||||||||||||||||||| ||||||    
T  1647825 atgttggagtaagccctaatagctggtctatattgattgggtttggctttgtatcatg 1647768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 15601184 - 15601127
Alignment:
Q  10 tgttggaataagccctaatagccaatctata-ttgattgggtttggctttgcatcatg 66  Q
    ||||||||||||||||||||||||||||||| || ||||||||||| |||| ||||||    
T  15601184 tgttggaataagccctaatagccaatctatattttattgggtttggatttgtatcatg 15601127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 13516719 - 13516775
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||||| || ||||||    
T  13516719 tgttggagtaagccctaatagccaatctatgttgattgagtttggctgtgtatcatg 13516775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 17781414 - 17781370
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttgg 54  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||    
T  17781414 tgttggagtaagccctaatagccaatctatattgattgagtttgg 17781370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 19090041 - 19089997
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttgg 54  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||    
T  19090041 tgttggagtaagccctaatagccaatctatattgattgagtttgg 19089997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 32057200 - 32057144
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||| ||||| |||||||||||||||| ||||||||||||| ||||| ||||||    
T  32057200 tgttggagtaagctctaatagccaatctatgttgattgggtttgactttgtatcatg 32057144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 18510829 - 18510885
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||  |||| ||||||    
T  18510829 tgttggagtaagccctaatatccaatctatattgattgagtttgattttgtatcatg 18510885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 18522570 - 18522626
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||  |||| ||||||    
T  18522570 tgttggagtaagccctaatatccaatctatattgattgagtttgattttgtatcatg 18522626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 18534671 - 18534719
Alignment:
Q  18 taagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||||||||| |||||||||||||||| |||||| |||| ||||||    
T  18534671 taagccctaatagtcaatctatattgattgagtttggttttgtatcatg 18534719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 29924879 - 29924935
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||| ||||||||||||| | |||||||||||||| ||||| | ||| ||||||    
T  29924879 tgttggagtaagccctaatagtcgatctatattgattgagtttgacattgtatcatg 29924935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 29974032 - 29974088
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||| ||||||||||||| | |||||||||||||| ||||| | ||| ||||||    
T  29974032 tgttggagtaagccctaatagtcgatctatattgattgagtttgacattgtatcatg 29974088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 179; Significance: 1e-96; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 104 - 302
Target Start/End: Complemental strand, 16566525 - 16566327
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16566525 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16566426  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    ||| |||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566425 cccgttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 16566327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 102 - 302
Target Start/End: Original strand, 29308890 - 29309090
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  29308890 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29308989  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    | |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29308990 agcccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29309089  T
Q  302 c 302  Q
    |    
T  29309090 c 29309090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 102 - 302
Target Start/End: Original strand, 29315850 - 29316050
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  29315850 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29315949  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    | |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29315950 agcccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29316049  T
Q  302 c 302  Q
    |    
T  29316050 c 29316050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 102 - 302
Target Start/End: Complemental strand, 17691647 - 17691447
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17691647 acaaggcatttctttattgattttgttttctttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 17691548  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||||||||||||||| ||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  17691547 accccattaaacataaggaaactattcttaaagtatccgtagtcaagctttagtgagaagtgggatatcattaaagcataaagactattatgtaggtaga 17691448  T
Q  302 c 302  Q
    |    
T  17691447 c 17691447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 102 - 302
Target Start/End: Complemental strand, 27381459 - 27381259
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27381459 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27381360  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||||||||||||||  ||||||||||| ||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381359 accccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 27381260  T
Q  302 c 302  Q
    |    
T  27381259 c 27381259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 102 - 302
Target Start/End: Complemental strand, 27471842 - 27471642
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27471842 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27471743  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||||||||||||||  ||||||||||| ||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471742 accccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 27471643  T
Q  302 c 302  Q
    |    
T  27471642 c 27471642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 104 - 302
Target Start/End: Complemental strand, 189182 - 188984
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  189182 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 189083  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  189082 cccattaaacataaggaaactattcttaaagtatttgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagac 188984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 104 - 302
Target Start/End: Complemental strand, 17684674 - 17684476
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17684674 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 17684575  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    ||| |||||||||| ||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684574 cccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagac 17684476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 104 - 302
Target Start/End: Original strand, 11651725 - 11651923
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11651725 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 11651824  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    ||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  11651825 cccattaaaaataaggaaactattctaaaagtatcagtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagac 11651923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 104 - 302
Target Start/End: Complemental strand, 25537364 - 25537166
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||    
T  25537364 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtccgtttaatggaacattaagtataactttattgtgagac 25537265  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    ||| |||||||||| ||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25537264 cccgttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtagac 25537166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 104 - 292
Target Start/End: Complemental strand, 13359474 - 13359286
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||  | |||||||| |||||||||||||||||| |||| ||    
T  13359474 aaggcatttatttatttattttgttttgtttcaaaataataaagtccctagaatagttagttcgcttaatggagcattaagtataacttaatcgtgaaac 13359375  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattat 292  Q
     |||||||||||||  | | |||| | |||||||| |||||||| |||||||| ||| ||||| | ||||||||| |||||||||||||    
T  13359374 tccattaaacataaaaacattatttttaaagtatccgtagtcaacctttattgtgaaatgggacaacattaaagcgtagagactattat 13359286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 294
Target Start/End: Original strand, 8509941 - 8510115
Alignment:
Q  121 attttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgaga-ccccattaaacataatg 219  Q
    ||||| |||||||| ||||||||||||||  ||||||| ||||||| ||| ||||||||||| |||  |||||||| ||||| |||||||||| || | |    
T  8509941 attttattttgttttaaaataataaagtctatagaataattagtctatttgatggaacattatgtacgacttaattatgagacccccattaaatatgagg 8510040  T
Q  220 aaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 294  Q
    |   |||| | ||||||| |||||| ||||||||||  ||| || |||| ||||||| |||| ||||||||||||    
T  8510041 atgatattattaaagtatatgtagttaagctttattatgaaatgagatagcattaaaacataaagactattatgt 8510115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 125 - 294
Target Start/End: Original strand, 27925772 - 27925946
Alignment:
Q  125 tgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacat---taagtata--acttaattgtgagaccccattaaacataatg 219  Q
    |||||||||||||||||||||||||| |||||||  |||| ||||||| |||||||   ||||| |   ||||||| ||||||| |||||||||  ||      
T  27925772 tgttttgtttcaaaataataaagtccttagaataactagtatgtttaacggaacataattaagtgtgtgacttaatcgtgagactccattaaactaaaga 27925871  T
Q  220 aaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 294  Q
    ||| |||||| ||||||||| ||||||| |||||||  ||||||| ||| |||| ||||| | ||||||||||||    
T  27925872 aaattattcttaaagtatctctagtcaaactttatttggaagtggtatagcattgaagcacaaagactattatgt 27925946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 17691737 - 17691683
Alignment:
Q  12 ttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17691737 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 17691683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 27381551 - 27381502
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 59  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381551 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 27381502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 27471934 - 27471885
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 59  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471934 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 27471885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 29308798 - 29308854
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  29308798 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29308854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 29315758 - 29315814
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  29315758 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29315814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 141 - 302
Target Start/End: Complemental strand, 20553755 - 20553594
Alignment:
Q  141 aataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaaactattctaaaagtatctg 240  Q
    ||||||||| |||| |||| ||||| |||||||| || ||||||||  ||||||| |||||| ||||||||| ||||  | | |||||| |||| ||| |    
T  20553755 aataaagtctctaggatagctagtccgtttaatgaaatattaagtacgacttaatcgtgagatcccattaaatataagaatattattcttaaagcatccg 20553656  T
Q  241 tagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    |||| ||  ||||||| |||||| ||||  ||||||||||| ||| | |||||| |||||||    
T  20553655 tagtgaatttttattgtgaagtgagataaaattaaagcataaagatttttatgttggtagac 20553594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 17684768 - 17684712
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||    
T  17684768 tgttggaataagccctaatagccaatctatgttgaatgggtttggctttgtatcatg 17684712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 11651630 - 11651684
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatca 64  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||    
T  11651630 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatca 11651684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 25537461 - 25537405
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||| ||||||||||||||||||||||||||| || ||||||||||| ||||||    
T  25537461 tgttggattaagccctaatagccaatctatattgactgagtttggctttgtatcatg 25537405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 31258120 - 31258065
Alignment:
Q  109 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagt 164  Q
    |||||||||||| |||||||||||||||||||||||||||| ||| |||| |||||    
T  31258120 atttctttattgcttttgttttgtttcaaaataataaagtctctaaaataattagt 31258065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 302
Target Start/End: Complemental strand, 17850663 - 17850502
Alignment:
Q  140 taataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaaactattctaaaagtatct 239  Q
    |||||||||||||| ||||| |||| |||||  |||||||||| |||  |||||||||||| | || |||||| | || || |||||||| ||| ||||     
T  17850663 taataaagtccctataatagctagtttgtttgttggaacattatgtaagacttaattgtgatatccaattaaaaacaaggacactattcttaaattatcc 17850564  T
Q  240 gtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
     |||||||||||| ||| |||||   ||| |||| ||| ||| |||||||||| | |||||||    
T  17850563 atagtcaagcttt-ttgtgaagtcaaataacattcaagtatatagactattatatgggtagac 17850502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 140 - 302
Target Start/End: Complemental strand, 20736773 - 20736610
Alignment:
Q  140 taataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaa-actattctaaaa-gtat 237  Q
    ||||||||| |||||||||| ||||  || |||||| | ||||||| | |||||||  |||||   |||||| ||||| ||| | |||||| ||| ||||    
T  20736773 taataaagttcctagaatagatagttcgtgtaatggtatattaagtttgacttaatcatgagattacattaa-cataaagaacattattcttaaatgtat 20736675  T
Q  238 ctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    |||||||||||||||| | |||| |||||||  | |||||| | |||||||||||||| ||||||    
T  20736674 ctgtagtcaagctttaataagaactgggataataataaagcgtcgagactattatgtatgtagac 20736610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 13359560 - 13359512
Alignment:
Q  18 taagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||| |||||||||||||||||||| |||||||||| ||||| ||||||    
T  13359560 taagtcctaatagccaatctatattcattgggtttgactttgtatcatg 13359512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 16566611 - 16566563
Alignment:
Q  18 taagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||||||||||||||||||||| ||||||| ||||| ||||| ||||||    
T  16566611 taagccctaatagccaatctatgttgattgagtttgactttgtatcatg 16566563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 189282 - 189221
Alignment:
Q  8 aatgttggaataagccctaatagccaatcta---tattgattgggtttggctttgcatcatg 66  Q
    ||||||||| ||||||||||||  |||||||   ||||||||||||||||||||| ||||||    
T  189282 aatgttggagtaagccctaataatcaatctagtatattgattgggtttggctttgtatcatg 189221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 28605854 - 28605931
Alignment:
Q  140 taataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataa 217  Q
    |||||||||  |||||||||||| | |||||||||| || |||||| | ||| |||||||||||| | ||||| ||||    
T  28605854 taataaagtatctagaatagttattttgtttaatgggactttaagtgtgactaaattgtgagacctcgttaaagataa 28605931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 177; Significance: 2e-95; HSPs: 2)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 102 - 302
Target Start/End: Original strand, 993 - 1193
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||    
T  993 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctaaaatagttagtccgtttaatgaaacattaagtataacttaattgtgag 1092  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1093 accccattaaacataaagaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 1192  T
Q  302 c 302  Q
    |    
T  1193 c 1193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 900 - 957
Alignment:
Q  9 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  900 atgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 177; Significance: 2e-95; HSPs: 4)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 102 - 302
Target Start/End: Complemental strand, 7141 - 6941
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  7141 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaactgtgag 7042  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||| ||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7041 accctattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 6942  T
Q  302 c 302  Q
    |    
T  6941 c 6941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 102 - 302
Target Start/End: Complemental strand, 14157 - 13957
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||    
T  14157 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctacaatagttagtccgtttaatggaacattaagtataacttaactgtgag 14058  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14057 accccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtaga 13958  T
Q  302 c 302  Q
    |    
T  13957 c 13957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 7233 - 7177
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||    
T  7233 tgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 7177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 14249 - 14193
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||    
T  14249 tgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 14193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 177; Significance: 2e-95; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 102 - 302
Target Start/End: Original strand, 21940665 - 21940865
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21940665 acaatgcatttctttattgattttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21940764  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21940765 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 21940864  T
Q  302 c 302  Q
    |    
T  21940865 c 21940865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 104 - 302
Target Start/End: Original strand, 28554885 - 28555083
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    |||||||||||||||||||||||||| |||||||||||||||| | |||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28554885 aaggcatttctttattgattttgtttagtttcaaaataataaaatacctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28554984  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28554985 cccattaaacataatgaaactattctaaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 28555083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 104 - 302
Target Start/End: Original strand, 22171491 - 22171687
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22171491 aaggcatttccttattgattttgttttatttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 22171590  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    |||||||||||||  ||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22171591 cccattaaacata--gaaactattctcaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtaggtagac 22171687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 108 - 301
Target Start/End: Original strand, 6094129 - 6094322
Alignment:
Q  108 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  6094129 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 6094228  T
Q  208 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  6094229 ttaaacataaggaaactatttttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatatgggtaga 6094322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 108 - 302
Target Start/End: Original strand, 24642655 - 24642849
Alignment:
Q  108 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 207  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||     
T  24642655 catttctttattgattttgttttgtttcaaaatcataaagtccctagaattgttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 24642754  T
Q  208 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    |||||||||| ||||||||||| |||||||  |||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||    
T  24642755 ttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgagatatcattaaagtatagagactattatgtgggtagac 24642849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 108 - 235
Target Start/End: Original strand, 24636860 - 24636987
Alignment:
Q  108 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 207  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||     
T  24636860 catttctttcttgattttgttttgtttcaaaataataaagtccctagaatagttagtccttttaatggaacattaagtataacttaattgtgagaccccg 24636959  T
Q  208 ttaaacataatgaaactattctaaaagt 235  Q
    |||||||||| ||||||||||| |||||    
T  24636960 ttaaacataaggaaactattcttaaagt 24636987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 114 - 302
Target Start/End: Complemental strand, 38232570 - 38232384
Alignment:
Q  114 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaac 213  Q
    ||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||  |   ||| ||||||||||||  ||| || |||||||||    
T  38232570 tttattgattttgttttatttcaaaataataaa-tctctagaatagttagtctgtttaataaatttttaggtataacttaatcatgacactccattaaac 38232472  T
Q  214 ataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
     |||  | | |||||| ||||||| ||||||||| ||||||||  ||||| ||||   |||||||||| | |||||| ||| |||||||    
T  38232471 gtaa-aatagtattcttaaagtatttgtagtcaaactttattgtaaagtgagatagtcttaaagcataaaaactattttgtgggtagac 38232384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 132 - 293
Target Start/End: Complemental strand, 32873019 - 32872857
Alignment:
Q  132 tttcaaaataataaagtccctagaatagttagtctgttta-atggaacattaagtataacttaattgtgagaccccattaaacataatgaaactattcta 230  Q
    ||||||||||||||||||| || |||||||  ||  |||| || ||||||||||||| |||||||||||||| | |||| || | | ||| | || | |     
T  32873019 tttcaaaataataaagtccttataatagttcatccatttatatagaacattaagtatgacttaattgtgagatctcattgaaaagagtgacaatactatt 32872920  T
Q  231 aaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatg 293  Q
    ||| ||| |||||| ||| ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  32872919 aaaatatttgtagttaagatttattgtgaagtgggataacatcaaagcatagagactattatg 32872857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 22070107 - 22070164
Alignment:
Q  9 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  22070107 atgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 22070164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 21940573 - 21940629
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  21940573 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 21940629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 24642556 - 24642605
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 59  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24642556 tgttggagtaagccctaatagccaatctatattgattgggtttggctttg 24642605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 6094031 - 6094087
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  6094031 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 6094087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 22171396 - 22171452
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||    
T  22171396 tgttggaataagccctaatagccaatctatattgattgggtttgattttgtatcatg 22171452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 28554791 - 28554847
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||| |||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  28554791 tgttggagtaagccctaatagccaatctttgttgattgggtttggctttgtatcatg 28554847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 10920234 - 10920297
Alignment:
Q  140 taataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    ||||||| | ||||||||| |||||||||||||||||||||||||||| | ||||| |||||||    
T  10920234 taataaaattcctagaataattagtctgtttaatggaacattaagtatgagttaatcgtgagac 10920297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 2375027 - 2375085
Alignment:
Q  123 tttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacatt 181  Q
    |||||||||||||||||||||||| |||||| |||| ||||||  ||||||||||||||    
T  2375027 tttgttttgtttcaaaataataaactccctataataattagtcaatttaatggaacatt 2375085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 302
Target Start/End: Complemental strand, 14984004 - 14983927
Alignment:
Q  224 tattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    |||||| ||||||||| || ||||  ||||||| ||||||||||| |||| ||| |||| ||||||||||| |||||||    
T  14984004 tattcttaaagtatctataatcaaaatttattgtgaagtgggataacatt-aagaatagggactattatgtgggtagac 14983927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 47
Target Start/End: Original strand, 24636605 - 24636642
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattg 47  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  24636605 tgttggagtaagccataatagccaatctatattgattg 24636642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 177; Significance: 2e-95; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 102 - 298
Target Start/End: Complemental strand, 21330455 - 21330259
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21330455 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21330356  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggt 298  Q
    |||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggt 21330259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 102 - 302
Target Start/End: Original strand, 18796506 - 18796706
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    |||||| |||| ||| || |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18796506 acaaggaatttatttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 18796605  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    ||| | || ||||||| || | |||||| ||| |||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||| ||||||    
T  18796606 acctcttttaacataaggatattattcttaaattatctgtagtcaagctttattgtgaagtggtatatcattaaagcattgagactattatgtgggtaga 18796705  T
Q  302 c 302  Q
    |    
T  18796706 c 18796706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 104 - 300
Target Start/End: Original strand, 18619807 - 18620002
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||| | |||||||| |||||     
T  18619807 aaggaatttctttgttgattttgttttgtttcaaaataataaagtccctataataattagtctgtttaatggagcattaagtgtgacttaattatgaga- 18619905  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtag 300  Q
    ||||||||||| || || | |||||| ||||||||||| ||||| |||||||| |||  ||||||  ||||||||||| |||||||||||| |||||    
T  18619906 cccattaaacaaaaggatattattcttaaagtatctgtggtcaaactttattgtgaaaagggataatattaaagcatatagactattatgtgggtag 18620002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 108 - 247
Target Start/End: Complemental strand, 19692737 - 19692598
Alignment:
Q  108 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 207  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||  | |||||||  ||||| | ||    
T  19692737 catttctttattgattttgttttgtttcaaaataatgaagtccctagaataattagtctgtttaatggaacattaagcctgacttaatcatgagatctca 19692638  T
Q  208 ttaaacataatgaaactattctaaaagtatctgtagtcaa 247  Q
    ||||||  || |||| |||||| ||||||||  |||||||    
T  19692637 ttaaactaaaggaaattattcttaaagtatccttagtcaa 19692598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 166 - 294
Target Start/End: Original strand, 20977956 - 20978084
Alignment:
Q  166 tgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtggg 265  Q
    ||||||||||||||||||| |||| |||||  ||||| ||||||||| |||| |||| |||||| |||  ||| |||||||||||||| || |||||| |    
T  20977956 tgtttaatggaacattaagaataatttaatcatgagatcccattaaaaataaggaaattattcttaaaacatccgtagtcaagctttaatgtgaagtgag 20978055  T
Q  266 atatcattaaagcatagagactattatgt 294  Q
    |||||| ||||||||||||||||||||||    
T  20978056 atatcactaaagcatagagactattatgt 20978084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 302
Target Start/End: Original strand, 36270199 - 36270366
Alignment:
Q  136 aaaataataaagtccctagaatagttagtct-gtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaaactattctaaaag 234  Q
    ||||||||||||||||||||||||||||| |  || |||| ||  |||||| | ||||||| |||||||  ||||||||| ||||| |||||||| |||     
T  36270199 aaaataataaagtccctagaatagttagtttacttaaatgaaatgttaagtgtgacttaatcgtgagacatcattaaacacaatgacactattcttaaaa 36270298  T
Q  235 tatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
     ||| ||| |||||||||| || |||| |||||| |||||||| ||| |||||||| ||| |||||||    
T  36270299 catccgtaatcaagctttagtgtgaagagggataacattaaagtataaagactattgtgtgggtagac 36270366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 21330550 - 21330493
Alignment:
Q  9 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21330550 atgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 21330493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 294
Target Start/End: Original strand, 18822115 - 18822275
Alignment:
Q  136 aaaataataaagtccctagaatagttagtctgtttaa-tggaaca-ttaagtataacttaattgtgagaccccattaaacataatgaaactattctaaaa 233  Q
    ||||||||||||||  |||||| ||||||  |||||| ||||| | |||||| |  |||||| ||||||| |||||||||| || || |||||||| |||    
T  18822115 aaaataataaagtctatagaattgttagttcgtttaaatggaaaaattaagtgtggcttaatcgtgagacaccattaaacacaaggacactattcttaaa 18822214  T
Q  234 gtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 294  Q
      || |||| |||||||||| |  |||||||||||||||||||||| | ||| ||||||||    
T  18822215 acatatgtaatcaagctttagtttgaagtgggatatcattaaagcagatagattattatgt 18822275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 302
Target Start/End: Complemental strand, 18852146 - 18852066
Alignment:
Q  222 actattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    |||||||| ||||||| ||||||| | |||||||| ||||| ||||| |||||||   || |||||||||||| |||||||    
T  18852146 actattcttaaagtatatgtagtccaactttattgtgaagtaggataacattaaattgtatagactattatgtcggtagac 18852066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 19692829 - 19692773
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||| |||||| ||||||||||||| |||| ||| ||||||| |||| ||||||    
T  19692829 tgttggagtaagccttaatagccaatctgtatttattaggtttggttttgtatcatg 19692773  T

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Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 293
Target Start/End: Complemental strand, 36802820 - 36802664
Alignment:
Q  138 aataataaagtccctagaatagttagtctgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataatgaaactattctaaaagta 236  Q
    ||||||||||||| | ||||||||| |  |||||| ||||| ||||| | | |||||||||  |||   ||||||||| ||||| | |||||| |||  |    
T  36802820 aataataaagtcctttgaatagttaattcgtttaaatggaatattaaatgttacttaattgcaagatatcattaaacacaatgacattattcttaaaaca 36802721  T
Q  237 tctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatg 293  Q
    || ||| ||||| || | ||  |||||||||| |||||||||||| ||| |||||||    
T  36802720 tccgtaatcaagattcagtgtaaagtgggataacattaaagcatatagattattatg 36802664  T

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Target: scaffold0220 (Bit Score: 173; Significance: 5e-93; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 102 - 302
Target Start/End: Original strand, 18288 - 18488
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||    
T  18288 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaattgaacattaagtataacttaattgtgag 18387  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18388 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 18487  T
Q  302 c 302  Q
    |    
T  18488 c 18488  T

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Target: scaffold0220; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 18196 - 18252
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18196 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18252  T

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Target: scaffold0186 (Bit Score: 161; Significance: 7e-86; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 102 - 302
Target Start/End: Complemental strand, 26197 - 25997
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 201  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||| |||||||||||||||||    
T  26197 acaagacatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccatttaatggaacattaaatataacttaattgtgag 26098  T
Q  202 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 301  Q
    |||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  26097 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgaaaagtgggatatcattaaagcatagcgactattatgtaggtaga 25998  T
Q  302 c 302  Q
    |    
T  25997 c 25997  T

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Target: scaffold0186; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 26286 - 26231
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcat 65  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  26286 tgttggaataagccctaatagtcaatctatattgattgggtttggctttgtatcat 26231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 159; Significance: 1e-84; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 104 - 302
Target Start/End: Original strand, 5531 - 5729
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5531 aaggcatttctttattgatttatttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 5630  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 302  Q
    ||| |||||||||| |||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  5631 cccgttaaacataaggaaattattcttaaagtatatgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagac 5729  T

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Target: scaffold0063; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 5444 - 5492
Alignment:
Q  18 taagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  5444 taagccctaatagccaatctatattgtttgggtttggctttgtatcatg 5492  T

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Target: scaffold0008 (Bit Score: 138; Significance: 4e-72; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 104 - 285
Target Start/End: Complemental strand, 230545 - 230365
Alignment:
Q  104 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  230545 aaggcatttctttattgattttgttttgtttcaaaataataaagttcttataatagttagtccgtttaatggaacattaagtataacttaattgtgagac 230446  T
Q  204 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagaga 285  Q
    ||| |||||||||| ||||| ||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  230445 ccc-ttaaacataaggaaaccattcttaaagtatttgtagtcaagatttattgagaagtgggatatcattaaagcatagaga 230365  T

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Target: scaffold0008; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 230640 - 230584
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||||||| ||||||    
T  230640 tgttggagtaagcaataatagccaatctatattgattgggtttggctttgtatcatg 230584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 8510 - 8447
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtc 165  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8510 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtc 8447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 8602 - 8546
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  8602 tgttggaataagccctaatagccaatctatattgattgggttcggctttgtatcatg 8546  T

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Target: scaffold0203 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 23825 - 23769
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23825 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 23769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 16523 - 16571
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggcttt 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16523 tgttggaataagccctaatagccaatctatattgattgggtttggcttt 16571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 135
Target Start/End: Original strand, 16615 - 16648
Alignment:
Q  102 acaaggcatttctttattgattttgttttgtttc 135  Q
    |||||||||||||||||||||||||||||| |||    
T  16615 acaaggcatttctttattgattttgttttgnttc 16648  T

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Target: scaffold0705 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0705
Description:

Target: scaffold0705; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 97 - 41
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||||||||||||||||||||||||||| ||||||  |||||||||| ||||||    
T  97 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 41  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 8944 - 9000
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||||| ||||||    
T  8944 tgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 9000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 42 - 1
Alignment:
Q  5 accaatgttggaataagccctaatagccaatctatattgatt 46  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  42 accactgttggaataagccctaatagccaatctatattgatt 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 10256 - 10202
Alignment:
Q  12 ttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 66  Q
    ||||| ||||| |||||||||||||||||||||||| ||||| ||||| ||||||    
T  10256 ttggagtaagctctaatagccaatctatattgattgagtttgactttgtatcatg 10202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 152
Target Start/End: Complemental strand, 10158 - 10127
Alignment:
Q  121 attttgttttgtttcaaaataataaagtccct 152  Q
    ||||||||||||||||||||||||||||||||    
T  10158 attttgttttgtttcaaaataataaagtccct 10127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 5878 - 5927
Alignment:
Q  10 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 59  Q
    ||||||| |||| | ||||||||||||||||||||||| ||||| |||||    
T  5878 tgttggagtaagtcataatagccaatctatattgattgagtttgactttg 5927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 92194 - 92267
Alignment:
Q  131 gtttcaaaataataaagtccctagaatagttagtctgtttaa-tggaacattaagtataacttaattgtgagac 203  Q
    |||| ||| |||||||||| ||||||||  ||||   ||||| ||||||||||||||||||||||| |||||||    
T  92194 gttttaaagtaataaagtctctagaatatctagttattttaaatggaacattaagtataacttaatcgtgagac 92267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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