View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17531_high_8 (Length: 362)

Name: NF17531_high_8
Description: NF17531
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17531_high_8
NF17531_high_8
[»] chr7 (24 HSPs)
chr7 (83-362)||(18873141-18873420)
chr7 (88-362)||(15167956-15168230)
chr7 (92-362)||(10895795-10896065)
chr7 (84-362)||(14422766-14423043)
chr7 (77-361)||(12709833-12710117)
chr7 (77-361)||(13122904-13123188)
chr7 (88-362)||(16009359-16009631)
chr7 (77-361)||(13743492-13743774)
chr7 (77-296)||(12590633-12590850)
chr7 (77-296)||(13007281-13007497)
chr7 (90-284)||(16677152-16677348)
chr7 (90-284)||(17651388-17651584)
chr7 (77-143)||(21230949-21231015)
chr7 (88-143)||(11382871-11382926)
chr7 (88-143)||(11389348-11389403)
chr7 (77-143)||(20311039-20311107)
chr7 (88-207)||(13679428-13679548)
chr7 (87-142)||(2971254-2971309)
chr7 (87-142)||(20906461-20906516)
chr7 (88-142)||(11311059-11311113)
chr7 (82-123)||(831628-831669)
chr7 (82-123)||(1196808-1196849)
chr7 (82-123)||(34958578-34958619)
chr7 (88-144)||(46625961-46626017)
[»] chr5 (13 HSPs)
chr5 (83-362)||(22750922-22751201)
chr5 (76-362)||(38144525-38144809)
chr5 (88-362)||(28370055-28370327)
chr5 (88-362)||(19512168-19512441)
chr5 (83-296)||(23528479-23528690)
chr5 (88-152)||(18407944-18408008)
chr5 (77-143)||(22438736-22438803)
chr5 (88-152)||(23111200-23111264)
chr5 (87-142)||(19236900-19236955)
chr5 (76-202)||(34830024-34830150)
chr5 (76-143)||(42961566-42961633)
chr5 (87-140)||(22461158-22461211)
chr5 (87-140)||(22467782-22467835)
[»] chr3 (21 HSPs)
chr3 (88-362)||(14762758-14763032)
chr3 (90-362)||(38310802-38311074)
chr3 (90-362)||(20247791-20248055)
chr3 (90-354)||(24192744-24193009)
chr3 (88-362)||(9534110-9534382)
chr3 (87-362)||(23370505-23370779)
chr3 (90-354)||(55499104-55499368)
chr3 (87-361)||(24933828-24934100)
chr3 (77-296)||(41455087-41455304)
chr3 (77-256)||(16801457-16801635)
chr3 (88-149)||(18929239-18929300)
chr3 (88-152)||(17240513-17240577)
chr3 (87-347)||(10389443-10389702)
chr3 (87-142)||(13302240-13302295)
chr3 (87-142)||(13323787-13323842)
chr3 (87-201)||(10414532-10414646)
chr3 (87-201)||(10421202-10421316)
chr3 (87-142)||(12033444-12033499)
chr3 (87-142)||(13312896-13312951)
chr3 (87-142)||(17131732-17131787)
chr3 (87-142)||(51301589-51301644)
[»] scaffold0026 (2 HSPs)
scaffold0026 (77-362)||(11840-12125)
scaffold0026 (87-362)||(111468-111741)
[»] scaffold1773 (1 HSPs)
scaffold1773 (80-362)||(960-1240)
[»] scaffold0006 (1 HSPs)
scaffold0006 (80-362)||(49961-50241)
[»] chr4 (12 HSPs)
chr4 (77-361)||(8045822-8046105)
chr4 (77-362)||(11847888-11848179)
chr4 (87-276)||(53483573-53483760)
chr4 (77-143)||(15408139-15408205)
chr4 (87-277)||(27906130-27906321)
chr4 (88-144)||(8834895-8834951)
chr4 (88-144)||(13888641-13888697)
chr4 (90-171)||(14486632-14486713)
chr4 (88-144)||(15245215-15245271)
chr4 (93-144)||(22724691-22724742)
chr4 (82-123)||(15747551-15747592)
chr4 (88-144)||(15308120-15308176)
[»] chr6 (23 HSPs)
chr6 (88-321)||(23057760-23057993)
chr6 (77-362)||(29614136-29614421)
chr6 (88-362)||(23838980-23839253)
chr6 (77-362)||(10986170-10986454)
chr6 (88-362)||(4477639-4477912)
chr6 (77-348)||(18800233-18800503)
chr6 (90-354)||(21565214-21565477)
chr6 (77-222)||(930085-930229)
chr6 (77-296)||(12168212-12168428)
chr6 (77-296)||(19287121-19287337)
chr6 (77-296)||(19785859-19786075)
chr6 (77-296)||(19878305-19878521)
chr6 (77-296)||(19884081-19884297)
chr6 (87-276)||(34639986-34640173)
chr6 (87-276)||(34646660-34646847)
chr6 (87-201)||(25469704-25469816)
chr6 (77-143)||(24512833-24512899)
chr6 (88-284)||(9187352-9187550)
chr6 (88-144)||(25397172-25397228)
chr6 (88-144)||(19471335-19471391)
chr6 (88-144)||(25348486-25348542)
chr6 (87-171)||(31252394-31252478)
chr6 (90-144)||(25598643-25598697)
[»] chr8 (15 HSPs)
chr8 (90-362)||(8727735-8728007)
chr8 (87-362)||(44477405-44477678)
chr8 (87-362)||(44492563-44492836)
chr8 (77-361)||(23866396-23866680)
chr8 (179-362)||(27940946-27941127)
chr8 (77-296)||(17054440-17054656)
chr8 (88-197)||(18614217-18614327)
chr8 (88-152)||(23482053-23482117)
chr8 (77-143)||(14056553-14056619)
chr8 (88-144)||(39364919-39364975)
chr8 (77-143)||(25111976-25112042)
chr8 (88-142)||(29643386-29643440)
chr8 (87-142)||(24320670-24320725)
chr8 (76-143)||(27940840-27940907)
chr8 (88-144)||(21931696-21931752)
[»] scaffold0924 (1 HSPs)
scaffold0924 (77-362)||(740-1025)
[»] chr2 (17 HSPs)
chr2 (88-362)||(19661454-19661726)
chr2 (88-362)||(6483500-6483772)
chr2 (88-362)||(6486967-6487239)
chr2 (77-354)||(26583617-26583892)
chr2 (90-354)||(23089057-23089320)
chr2 (90-354)||(23878798-23879060)
chr2 (88-348)||(23101463-23101722)
chr2 (87-201)||(5706023-5706137)
chr2 (88-152)||(23265133-23265197)
chr2 (88-152)||(23280201-23280265)
chr2 (88-149)||(21908353-21908414)
chr2 (88-144)||(24661576-24661632)
chr2 (87-142)||(10577-10632)
chr2 (77-268)||(23168288-23168483)
chr2 (77-268)||(23579545-23579740)
chr2 (87-142)||(25180929-25180984)
chr2 (78-159)||(26885166-26885246)
[»] scaffold0025 (1 HSPs)
scaffold0025 (90-362)||(14398-14670)
[»] scaffold0029 (2 HSPs)
scaffold0029 (77-296)||(111728-111948)
scaffold0029 (317-362)||(111682-111727)
[»] chr1 (12 HSPs)
chr1 (88-362)||(20437024-20437297)
chr1 (77-296)||(41111884-41112100)
chr1 (88-152)||(32651563-32651627)
chr1 (88-143)||(19663517-19663572)
chr1 (88-152)||(18712790-18712854)
chr1 (88-144)||(20805320-20805376)
chr1 (88-143)||(11158093-11158148)
chr1 (90-144)||(10811785-10811839)
chr1 (87-142)||(20851132-20851187)
chr1 (87-142)||(20857759-20857814)
chr1 (87-142)||(21706276-21706331)
chr1 (87-142)||(21710818-21710873)
[»] scaffold0553 (1 HSPs)
scaffold0553 (87-362)||(10195-10469)
[»] scaffold0544 (1 HSPs)
scaffold0544 (87-362)||(1525-1799)
[»] scaffold0117 (2 HSPs)
scaffold0117 (77-362)||(1887-2171)
scaffold0117 (77-362)||(8564-8848)
[»] scaffold0247 (1 HSPs)
scaffold0247 (77-354)||(11131-11407)
[»] scaffold0058 (1 HSPs)
scaffold0058 (77-361)||(75-356)
[»] scaffold0090 (1 HSPs)
scaffold0090 (76-362)||(17950-18236)
[»] scaffold0476 (1 HSPs)
scaffold0476 (90-354)||(3295-3559)
[»] scaffold0154 (1 HSPs)
scaffold0154 (77-284)||(30715-30923)
[»] scaffold0077 (1 HSPs)
scaffold0077 (90-348)||(3624-3881)
[»] scaffold0634 (1 HSPs)
scaffold0634 (247-362)||(3443-3558)
[»] scaffold0796 (2 HSPs)
scaffold0796 (82-278)||(1727-1920)
scaffold0796 (82-278)||(5750-5943)
[»] scaffold0456 (4 HSPs)
scaffold0456 (83-170)||(904-991)
scaffold0456 (83-170)||(8049-8136)
scaffold0456 (231-327)||(806-901)
scaffold0456 (231-327)||(7951-8046)
[»] scaffold0129 (1 HSPs)
scaffold0129 (81-199)||(45268-45386)
[»] scaffold0107 (1 HSPs)
scaffold0107 (77-143)||(40521-40587)
[»] scaffold0222 (1 HSPs)
scaffold0222 (88-152)||(16811-16875)
[»] scaffold0004 (1 HSPs)
scaffold0004 (88-152)||(116887-116951)
[»] scaffold0310 (1 HSPs)
scaffold0310 (77-143)||(17643-17710)
[»] scaffold0124 (1 HSPs)
scaffold0124 (88-143)||(34276-34331)
[»] scaffold0019 (1 HSPs)
scaffold0019 (77-143)||(135473-135539)
[»] scaffold0461 (1 HSPs)
scaffold0461 (88-152)||(8-72)
[»] scaffold0235 (1 HSPs)
scaffold0235 (77-141)||(22582-22646)
[»] scaffold0146 (1 HSPs)
scaffold0146 (88-152)||(13623-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (88-152)||(101928-101992)
[»] scaffold0815 (1 HSPs)
scaffold0815 (77-139)||(1453-1515)
[»] scaffold0261 (1 HSPs)
scaffold0261 (77-277)||(23559-23760)
[»] scaffold2054 (1 HSPs)
scaffold2054 (77-176)||(680-780)
[»] scaffold0609 (1 HSPs)
scaffold0609 (87-171)||(5857-5941)
[»] scaffold0317 (1 HSPs)
scaffold0317 (88-207)||(1321-1441)
[»] scaffold0138 (1 HSPs)
scaffold0138 (88-144)||(12296-12352)
[»] scaffold0790 (1 HSPs)
scaffold0790 (74-109)||(5487-5522)
[»] scaffold0139 (1 HSPs)
scaffold0139 (88-143)||(14997-15052)
[»] scaffold0001 (1 HSPs)
scaffold0001 (78-159)||(493019-493099)
[»] scaffold0096 (1 HSPs)
scaffold0096 (84-144)||(39503-39563)
[»] scaffold0034 (1 HSPs)
scaffold0034 (90-277)||(73149-73337)
[»] scaffold0348 (1 HSPs)
scaffold0348 (87-142)||(9336-9391)
[»] scaffold0127 (1 HSPs)
scaffold0127 (87-142)||(10239-10294)
[»] scaffold0023 (1 HSPs)
scaffold0023 (87-142)||(135438-135493)
[»] scaffold1318 (1 HSPs)
scaffold1318 (88-142)||(1913-1967)
[»] scaffold0453 (1 HSPs)
scaffold0453 (87-171)||(10550-10634)
[»] scaffold0335 (1 HSPs)
scaffold0335 (88-144)||(2628-2684)
[»] scaffold0003 (2 HSPs)
scaffold0003 (74-102)||(80293-80321)
scaffold0003 (74-102)||(100015-100043)


Alignment Details
Target: chr7 (Bit Score: 248; Significance: 1e-137; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 83 - 362
Target Start/End: Complemental strand, 18873420 - 18873141
Alignment:
Q  83 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 182  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18873420 aaaactaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 18873321  T
Q  183 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 282  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  18873320 ggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 18873221  T
Q  283 cataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  18873220 cataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgt 18873141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 88 - 362
Target Start/End: Complemental strand, 15168230 - 15167956
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168230 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 15168131  T
Q  188 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 287  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  15168130 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 15168031  T
Q  288 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15168030 attgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgt 15167956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 92 - 362
Target Start/End: Original strand, 10895795 - 10896065
Alignment:
Q  92 gtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttgat 190  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  10895795 gtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttgat 10895894  T
Q  191 gatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaatt 290  Q
    ||||||||||| ||||| |||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  10895895 gatgattctgaggggaa-tgggtattgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 10895993  T
Q  291 gattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10895994 gattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgt 10896065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 84 - 362
Target Start/End: Complemental strand, 14423043 - 14422766
Alignment:
Q  84 aaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttag 182  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14423043 aaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttag 14422944  T
Q  183 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 282  Q
    |||||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||| ||||||    
T  14422943 ggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgat 14422845  T
Q  283 cataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    |||||||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||| ||| ||||| |||||||    
T  14422844 cataaattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggagtgatctgtatttgttgt 14422766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 77 - 361
Target Start/End: Original strand, 12709833 - 12710117
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 176  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  12709833 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 12709931  T
Q  177 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattct-gttgtaatataatgttcagaatgaaaacttaatctatgttgttg 275  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||||  ||||||||||| ||||||||    
T  12709932 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct-tgttgttg 12710030  T
Q  276 ctgtgatcataaattgattgagaa-ttatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttg 361  Q
    |||||||| |||| |||||  ||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  12710031 ctgtgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtgattgttg 12710117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 77 - 361
Target Start/End: Original strand, 13122904 - 13123188
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 176  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  13122904 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 13123002  T
Q  177 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattct-gttgtaatataatgttcagaatgaaaacttaatctatgttgttg 275  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||||  ||||||||||| ||||||||    
T  13123003 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct-tgttgttg 13123101  T
Q  276 ctgtgatcataaattgattgagaa-ttatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttg 361  Q
    |||||||| |||| |||||  ||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  13123102 ctgtgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtgattgttg 13123188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 88 - 362
Target Start/End: Complemental strand, 16009631 - 16009359
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 187  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||    
T  16009631 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatggttttggaagataaattgtgggttaaggttt 16009532  T
Q  188 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 287  Q
    ||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  16009531 gatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 16009433  T
Q  288 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    | ||||||| ||||||||  |||||||||||||||||||  | |||||||||||||||||| ||||| |||||||    
T  16009432 actgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgt 16009359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 77 - 361
Target Start/End: Complemental strand, 13743774 - 13743492
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 176  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  13743774 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 13743676  T
Q  177 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 276  Q
    ||||||||||||||||||||| ||||| |||||||||||| |||||||||||| | ||||| |||  |||||||| |||| |||||||||||||| ||||    
T  13743675 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattttcttgtattatgctgttcagattgaagacttaatctatgttattgc 13743576  T
Q  277 tgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttg 361  Q
    ||||||||||||||| |||| |||||||   | |||||| |||||||||||   ||||| |||||||| |||  ||| |||||||    
T  13743575 tgtgatcataaattggttga-aattatgcttggttggataaattgatgaataattgtataatggtggagtgatatgtgattgttg 13743492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 77 - 296
Target Start/End: Original strand, 12590633 - 12590850
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 176  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  12590633 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaa 12590731  T
Q  177 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 276  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| ||||||||| ||||||| ||||||||||    
T  12590732 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagttttcttggaatttaatgttaagaatgaaagcttaatccatgttgttgc 12590829  T
Q  277 tgtgat-cataaattgattga 296  Q
    ||| || ||| ||||||||||    
T  12590830 tgtaatccattaattgattga 12590850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 77 - 296
Target Start/End: Complemental strand, 13007497 - 13007281
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 176  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  13007497 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 13007399  T
Q  177 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 276  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  13007398 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 13007302  T
Q  277 tgtgat-cataaattgattga 296  Q
    ||| || ||| ||||||||||    
T  13007301 tgtaatccatgaattgattga 13007281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 90 - 284
Target Start/End: Complemental strand, 16677348 - 16677152
Alignment:
Q  90 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagat-aaattgagggttagggttt 187  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  16677348 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggttt 16677249  T
Q  188 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatca 284  Q
    |||||||||| ||| | | |  | ||||| |||||||||| | ||||||||  | ||||||||||||||  | ||||||||  ||||||||||||||    
T  16677248 gatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgctgtgatca 16677152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 90 - 284
Target Start/End: Complemental strand, 17651584 - 17651388
Alignment:
Q  90 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagat-aaattgagggttagggttt 187  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  17651584 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggttt 17651485  T
Q  188 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatca 284  Q
    |||||||||| ||| | | |  | ||||| |||||||||| | ||||||||  | ||||||||||||||  | ||||||||  ||||||||||||||    
T  17651484 gatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgctgtgatca 17651388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 21230949 - 21231015
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 143  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  21230949 ttctgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 21231015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 143
Target Start/End: Original strand, 11382871 - 11382926
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 143  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  11382871 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 143
Target Start/End: Original strand, 11389348 - 11389403
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 143  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  11389348 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11389403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 20311039 - 20311107
Alignment:
Q  77 ttctgcaaaa--ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 143  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  20311039 ttctgcaaaaatctaaggtaagggtgagactatctctcaataatcataacgtataatttctgaaaattg 20311107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 88 - 207
Target Start/End: Complemental strand, 13679548 - 13679428
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtt 186  Q
    |||||||||||||||||||||| || || ||||| || |||||||| |||||||||| ||||||  || ||| | || ||| ||| ||||  ||||||||    
T  13679548 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaattaaattgttcttgatgataaaactgagaattagggtt 13679449  T
Q  187 tgatgatgattctgaagggaa 207  Q
    ||||| ||||| |||| ||||    
T  13679448 tgatgctgattttgaaaggaa 13679428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 142
Target Start/End: Complemental strand, 2971309 - 2971254
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 142  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  2971309 ctaaggtaagggtgggattatctttcaatagtcataatttataatttctgaaaatt 2971254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 142
Target Start/End: Original strand, 20906461 - 20906516
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 142  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  20906461 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20906516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 11311113 - 11311059
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 142  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||||| ||||||    
T  11311113 taaggtaagggtgagactatctctcaataataatagtgtagaatttctaaaaatt 11311059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 831628 - 831669
Alignment:
Q  82 caaaactaaggtaagggtgagactatctctcgataatcataa 123  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  831628 caaaactaaggtaagggtgagactaactctcaataattataa 831669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 1196808 - 1196849
Alignment:
Q  82 caaaactaaggtaagggtgagactatctctcgataatcataa 123  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  1196808 caaaactaaggtaagggtgagactaactctcaataattataa 1196849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 123
Target Start/End: Complemental strand, 34958619 - 34958578
Alignment:
Q  82 caaaactaaggtaagggtgagactatctctcgataatcataa 123  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  34958619 caaaactaaggtaagggtgagactaactctcaataattataa 34958578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 46626017 - 46625961
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 144  Q
    |||| |||||||||||||| ||||| || || ||||| ||||||||| |||||||||    
T  46626017 taagataagggtgagactaactctcaatgattataatatataatttcggaaaattga 46625961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 248; Significance: 1e-137; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 83 - 362
Target Start/End: Complemental strand, 22751201 - 22750922
Alignment:
Q  83 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 182  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22751201 aaaactaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 22751102  T
Q  183 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 282  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  22751101 ggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 22751002  T
Q  283 cataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22751001 cataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgt 22750922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 76 - 362
Target Start/End: Original strand, 38144525 - 38144809
Alignment:
Q  76 attctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattga 175  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  38144525 attctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattga 38144624  T
Q  176 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 275  Q
    ||||||||||||||||||||||||| |||| |||||||| | |||||||||||||| ||||||| ||||||| ||||||||||||||||||||  |||||    
T  38144625 gggttagggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 38144723  T
Q  276 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
     |||||||||||||||||||| ||||| ||  |||||||||||||||||||  | |||||||||||||| ||| ||||| |||||||    
T  38144724 ttgtgatcataaattgattga-aattacgattgattggatgaattgatgaagatttgtatgatggtggagtgatctgtatttgttgt 38144809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 88 - 362
Target Start/End: Original strand, 28370055 - 28370327
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 187  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  28370055 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 28370154  T
Q  188 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 287  Q
    |||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  28370155 gatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 28370253  T
Q  288 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    ||||||||| ||||||||  ||| |||||||||||||||  | |||||||||||||||||| ||||| |||||||    
T  28370254 attgattga-aattatgattgatgggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgt 28370327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 88 - 362
Target Start/End: Complemental strand, 19512441 - 19512168
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggtt 186  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19512441 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 19512342  T
Q  187 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 286  Q
    ||||||||||| || |||| |||||||| | |||||||||||||| ||||||  ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  19512341 tgatgatgattttg-aggggaatgggtattgatcatgttaattctattgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 19512243  T
Q  287 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||||||| ||||| |||||||    
T  19512242 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgt 19512168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 83 - 296
Target Start/End: Complemental strand, 23528690 - 23528479
Alignment:
Q  83 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 182  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||  |||||    
T  23528690 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 23528592  T
Q  183 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 282  Q
    ||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||||| ||    
T  23528591 ggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttcttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgtaat 23528494  T
Q  283 -cataaattgattga 296  Q
     ||| ||||||||||    
T  23528493 ccatgaattgattga 23528479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 18407944 - 18408008
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 152  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  18407944 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattg 18408008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 22438736 - 22438803
Alignment:
Q  77 ttctgcaaaa-ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 143  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  22438736 ttctgcaaaatctaaggtaagggtgagactatctctcaataatcataatgtataatttctgaaaattg 22438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 23111200 - 23111264
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 152  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23111200 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23111264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 142
Target Start/End: Complemental strand, 19236955 - 19236900
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 142  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  19236955 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 19236900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 202
Target Start/End: Complemental strand, 34830150 - 34830024
Alignment:
Q  76 attctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattg 174  Q
    |||||||||  |||||||||||||| || ||||| || |||||  |||| ||||||||||||||||  | ||||| | |||||| | |||||| ||||||    
T  34830150 attctgcaattctaaggtaagggtgggattatctttcaataatt-taatgtataatttctgaaaatcaatctaatagaatagttcttgaagataaaattg 34830052  T
Q  175 agggttagggtttgatgatgattctgaa 202  Q
    ||  ||||||| ||||| ||||| ||||    
T  34830051 agaattagggtatgatgctgattttgaa 34830024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 42961633 - 42961566
Alignment:
Q  76 attctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 143  Q
    ||||||||||||||||||||||||||| ||| |  || || || ||||| ||| ||||||||||||||    
T  42961633 attctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattg 42961566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 22461211 - 22461158
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa 140  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||    
T  22461211 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22461158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 22467835 - 22467782
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa 140  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||    
T  22467835 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22467782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 243; Significance: 1e-134; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 88 - 362
Target Start/End: Original strand, 14762758 - 14763032
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762758 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 14762857  T
Q  188 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 287  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  14762858 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 14762957  T
Q  288 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  14762958 attgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatggtggagtgatctgtaattgttgt 14763032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 90 - 362
Target Start/End: Original strand, 38310802 - 38311074
Alignment:
Q  90 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38310802 aggtaagggtgagactatctctcgataatcataatctataatttctgaatattgacctaattgcatagttttggaagataaattgagggttagggtttga 38310901  T
Q  190 tgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaat 289  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  38310902 tgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 38311001  T
Q  290 tgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    ||||||| ||||||||| |||||||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  38311002 tgattgaaaattatgagtgattggatgaatggatgaatttgtgtatgaaggtggaatgatctgtaattgttgt 38311074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 90 - 362
Target Start/End: Original strand, 20247791 - 20248055
Alignment:
Q  90 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 189  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247791 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 20247890  T
Q  190 tgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaat 289  Q
    ||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  20247891 tgatgattctgaagggaaatgggtaatgatcatgttaattttcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 20247990  T
Q  290 tgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    ||||||| ||||||||| |||||        |||||||||||||||||||||||||||| |||||||||||||    
T  20247991 tgattgaaaattatgagtgattg--------gatgaatttgtgtatgatggtggaatgatctgtaattgttgt 20248055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 90 - 354
Target Start/End: Complemental strand, 24193009 - 24192744
Alignment:
Q  90 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttg 188  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24193009 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 24192910  T
Q  189 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtg-atcataa 287  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||| |||||||    
T  24192909 atgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttcagaatgaaaacttaatctatgctgttgctgtgaatcataa 24192810  T
Q  288 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgta 354  Q
    | ||||||| || |||||  |||||||| ||||||||||| |  ||||||||||||||||| |||||    
T  24192809 actgattga-aaatatgattgattggataaattgatgaatattggtatgatggtggaatgatctgta 24192744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 88 - 362
Target Start/End: Complemental strand, 9534382 - 9534110
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 187  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9534382 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 9534283  T
Q  188 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 287  Q
    ||||||||||||| || | |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  |||||  ||||||||||    
T  9534282 gatgatgattctg-agtggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgtcgtgatcataa 9534184  T
Q  288 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    ||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||||||| ||||| |||||||    
T  9534183 attgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgt 9534110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 87 - 362
Target Start/End: Original strand, 23370505 - 23370779
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggt 185  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  23370505 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 23370604  T
Q  186 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 285  Q
    ||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||    
T  23370605 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcat 23370703  T
Q  286 aaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    ||||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||| ||| ||||| |||||||    
T  23370704 aaattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggagtgatctgtatttgttgt 23370779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 90 - 354
Target Start/End: Original strand, 55499104 - 55499368
Alignment:
Q  90 aggtaagggtgagactatctctcgataatc-ataatctataatttctg-aaaattgacctaattgcatagttttggaagataaa-ttgagggttagggtt 186  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| | ||||||||||||| ||| ||   ||| | |||||| |||||||||||||||    
T  55499104 aggtaagggtgagactatctctcattaatagataatatgtaatttcgggaaaattgacctaactgcttaaccttg-aggataaaattgagggttagggtt 55499202  T
Q  187 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 286  Q
    ||||||||||||||| ||||| |||||||| |||||||||||| ||||||||| | |||||| |||||||| ||||||||||   |||||||||||||||    
T  55499203 tgatgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatacagttgctgtgatcata 55499301  T
Q  287 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgta 354  Q
    |||||||||| || ||| |  |||||||||||||||| || || |||||||||||||||||| |||||    
T  55499302 aattgattga-aaatataattgattggatgaattgatcaagttttgtatgatggtggaatgatctgta 55499368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 87 - 361
Target Start/End: Original strand, 24933828 - 24934100
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 186  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||   ||||||||    
T  24933828 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggtt 24933926  T
Q  187 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat-cat 285  Q
    ||||||||||||||| ||  |||| ||||  || |||||| || | | | ||| ||||||| ||||||||| ||||||| ||||||||||||  || |||    
T  24933927 tgatgatgattctgatgg--aatgagtaaagatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgttgttgctgcaatccat 24934024  T
Q  286 aaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatga-gctgtaattgttg 361  Q
     |||||||||| | || |||   |||| |||||||||||||| | ||||||||||| ||||||  ||||||||||||    
T  24934025 taattgattga-atttttgatgtattgtatgaattgatgaatatttgtatgatggtagaatgattctgtaattgttg 24934100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 77 - 296
Target Start/End: Original strand, 41455087 - 41455304
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 176  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||   |||     
T  41455087 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataggatgaa 41455185  T
Q  177 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 276  Q
      |||||| |||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||  ||||||||| ||||||| || | |||||    
T  41455186 aattagggattgatgatgattctgatgg--aatgagtaaagatgatgttagttttcttgaaatttaatgtcaagaatgaaatcttaatccatatggttgc 41455283  T
Q  277 tgtgat-cataaattgattga 296  Q
    ||| || ||| ||||||||||    
T  41455284 tgtaatccatgaattgattga 41455304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 77 - 256
Target Start/End: Original strand, 16801457 - 16801635
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattga 175  Q
    |||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||| ||||| ||| ||| |||||| |||||||    
T  16801457 ttctgcaaaactaaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaattgacctgattgcttagcttttgaagataaaattga 16801555  T
Q  176 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaa 256  Q
     |||||||| |||||||||||| ||| | |||  | ||||| |||||||||| | || |||||| | ||||| ||||||||    
T  16801556 aggttaggg-ttgatgatgattttgaggagaatggtgtaatgatcatgttaaatatgctgtaatgtgatgtttagaatgaa 16801635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 18929300 - 18929239
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaa 149  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| ||||    
T  18929300 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 18929239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 17240513 - 17240577
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 152  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  17240513 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 17240577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 347
Target Start/End: Original strand, 10389443 - 10389702
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 186  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||| | | ||||||| ||||||||  |  ||||  |||   ||||||||    
T  10389443 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10389542  T
Q  187 tgatgatgattctgaagggaaatgggtaataatcatgtta-attctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat-ca 284  Q
    ||||||||||||||| ||  |||||||||  || ||||||  || | | | ||| ||| ||| ||||||||| ||||| | ||||||||||||  || ||    
T  10389543 tgatgatgattctgatgg--aatgggtaaagatgatgttagtttttctcggaatttaacgttaagaatgaaagcttaacccatgttgttgctgcaatcca 10389640  T
Q  285 taaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatg 347  Q
    | |||||||||| | || |||   |||| |||||||||||||| | |||||| |||| |||||    
T  10389641 ttaattgattga-atttttgatgaattgtatgaattgatgaatatttgtatgttggtagaatg 10389702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 142
Target Start/End: Original strand, 13302240 - 13302295
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 142  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  13302240 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13302295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 142
Target Start/End: Original strand, 13323787 - 13323842
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 142  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  13323787 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13323842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 10414532 - 10414646
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 186  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||| | | ||||||| ||||||||  |  ||||  |||   ||||||||    
T  10414532 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10414631  T
Q  187 tgatgatgattctga 201  Q
    |||||||||||||||    
T  10414632 tgatgatgattctga 10414646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 10421202 - 10421316
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 186  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||| | | ||||||| ||||||||  |  ||||  |||   ||||||||    
T  10421202 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10421301  T
Q  187 tgatgatgattctga 201  Q
    |||||||||||||||    
T  10421302 tgatgatgattctga 10421316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 142
Target Start/End: Original strand, 12033444 - 12033499
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 142  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  12033444 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 12033499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 142
Target Start/End: Original strand, 13312896 - 13312951
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 142  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||| ||||||||    
T  13312896 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttttgaaaatt 13312951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 142
Target Start/End: Complemental strand, 17131787 - 17131732
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 142  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  17131787 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 17131732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 142
Target Start/End: Complemental strand, 51301644 - 51301589
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 142  Q
    ||||||||||||||||| |||||  | ||||||||||| | |||||||||||||||    
T  51301644 ctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 51301589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 238; Significance: 1e-132; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 77 - 362
Target Start/End: Original strand, 11840 - 12125
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 176  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11840 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgag 11939  T
Q  177 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 276  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||    
T  11940 agttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatcttcagaatgaaaacttaatctttgttgttgc 12039  T
Q  277 tgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    ||||||||||| |||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12040 tgtgatcataagttgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgt 12125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 87 - 362
Target Start/End: Complemental strand, 111741 - 111468
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 186  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  111741 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 111642  T
Q  187 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 286  Q
    |||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  111641 tgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 111543  T
Q  287 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||||||| ||||| |||||||    
T  111542 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgt 111468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 80 - 362
Target Start/End: Complemental strand, 1240 - 960
Alignment:
Q  80 tgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggt 179  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||    
T  1240 tgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggt 1142  T
Q  180 tagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgt 279  Q
    ||||||||||||| |||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  1141 tagggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct-tgttgttgctgt 1043  T
Q  280 gatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1042 gatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgt 960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 80 - 362
Target Start/End: Complemental strand, 50241 - 49961
Alignment:
Q  80 tgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggt 179  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||    
T  50241 tgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggt 50143  T
Q  180 tagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgt 279  Q
    ||||||||||||| |||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  50142 tagggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct-tgttgttgctgt 50044  T
Q  280 gatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  50043 gatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgt 49961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 221; Significance: 1e-121; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 77 - 361
Target Start/End: Original strand, 8045822 - 8046105
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  8045822 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgag 8045920  T
Q  177 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 276  Q
    ||||||||||||| ||  |||||||||||||||||||||  || ||||||||||| |||||||||||||||||||||||||||||||||  |||||||||    
T  8045921 ggttagggtttgacgagaattctgaagggaaatgggtaaagataatgttaattctcttgtaatataatgttcagaatgaaaacttaatccttgttgttgc 8046020  T
Q  277 tgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttg 361  Q
    |||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8046021 tgtgatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttg 8046105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 77 - 362
Target Start/End: Complemental strand, 11848179 - 11847888
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa----- 171  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| | ||||||||||| || || ||         
T  11848179 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaatca 11848080  T
Q  172 -ttgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgt 270  Q
     ||||||||||||||||||||| |||||||||| | |||||||||| ||||||||||| || || ||||||||||||||||||||||||||||||| |||    
T  11848079 attgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatccttttataatataatgttcagaatgaaaacttaatctttgt 11847980  T
Q  271 tgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  11847979 tgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatgatggaatgatctgtaattgttgt 11847888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 87 - 276
Target Start/End: Complemental strand, 53483760 - 53483573
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaat-tgagggttagggt 185  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||| ||| |  ||| |||   |||||||    
T  53483760 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggt 53483662  T
Q  186 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 276  Q
    |||||||||||||||| ||  |||| ||||  || |||||| || | |   ||| ||| ||| ||||||||||||||||| ||||||||||    
T  53483661 ttgatgatgattctgatgg--aatgagtaaagatgatgttagttttctctgaatttaacgttaagaatgaaaacttaatccatgttgttgc 53483573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 15408205 - 15408139
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 143  Q
    ||||||| | |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  15408205 ttctgcagatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 15408139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 277
Target Start/End: Complemental strand, 27906321 - 27906130
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggt 185  Q
    ||||| |||||||| || ||||| || || |||||||| ||||||||||||||||| |  |||| | |||||| | |||||| ||||||||  |||||||    
T  27906321 ctaagataagggtgggattatctttcaatgatcataatgtataatttctgaaaattaatataatagaatagttcttgaagataaaattgagaattagggt 27906222  T
Q  186 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgct 277  Q
     ||||| ||||| |||| | ||| | |||| ||||||||| | | ||||||||| | |||||| | ||||   ||||||||||  |||||||    
T  27906221 gtgatgttgattttgaaagaaaaggtgtaagaatcatgtttaatgtgttgtaatttgatgttccgtatgatttcttaatctataatgttgct 27906130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 8834951 - 8834895
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 144  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  8834951 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 8834895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 13888697 - 13888641
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 144  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  13888697 taaggtaagggtgaggctaactctcaatgatcataatgtataatttctgaaaattga 13888641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 14486713 - 14486632
Alignment:
Q  90 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 171  Q
    |||||||||||||||||||  || || |||||||| ||||||||||||||||| | | ||||| || ||| | |||||||||    
T  14486713 aggtaagggtgagactatccttcaatgatcataatatataatttctgaaaattaatcgaattgaattgttcttgaagataaa 14486632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 15245271 - 15245215
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 144  Q
    ||||||||||||||| ||| ||||| || ||| |||| |||||||||||||||||||    
T  15245271 taaggtaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15245215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 22724691 - 22724742
Alignment:
Q  93 taagggtgagactatctctcgataatcataatctataatttctgaaaattga 144  Q
    |||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  22724691 taagggtgagactatctctcaataataatagtatagaatttctgaaaattga 22724742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 15747551 - 15747592
Alignment:
Q  82 caaaactaaggtaagggtgagactatctctcgataatcataa 123  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  15747551 caaaactaaggtaagggtgagactaactctcaataattataa 15747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 15308176 - 15308120
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 144  Q
    |||| |||||||||| ||| ||||| || ||| |||| |||||||||||||||||||    
T  15308176 taagttaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 206; Significance: 1e-112; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 88 - 321
Target Start/End: Complemental strand, 23057993 - 23057760
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23057993 taaggtaagggtgagactatctctcgataatcataatctataattcctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 23057894  T
Q  188 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 287  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  23057893 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 23057794  T
Q  288 attgattgagaattatgagcgattggatgaattg 321  Q
    ||||||||| ||||||||| ||||||||||||||    
T  23057793 attgattgaaaattatgagtgattggatgaattg 23057760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 77 - 362
Target Start/End: Original strand, 29614136 - 29614421
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaaga-taaattga 175  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||    
T  29614136 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctagttgcataattttggaaaaataaattga 29614235  T
Q  176 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 275  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||| |  |||||| |||||||||||||||||| ||||||||    
T  29614236 gggttagggtttgatgatgattatgaagggaaatgggtaatgatcatgttaattctcttgtattg-aatgtttagaatgaaaacttaatctttgttgttg 29614334  T
Q  276 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    |||||||||||| |||||||| | ||||||  ||||||||||||||||||||||||||||||||||||||| | |||||| ||||||    
T  29614335 ctgtgatcataacttgattgaaatttatgaatgattggatgaattgatgaatttgtgtatgatggtggaataatctgtaagtgttgt 29614421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 88 - 362
Target Start/End: Complemental strand, 23839253 - 23838980
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagt-tttggaagataaattgagggttagggtt 186  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23839253 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtgtttggaagataaattgagggttagggtt 23839154  T
Q  187 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 286  Q
    ||||||||||||| ||||| |||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||    
T  23839153 tgatgatgattct-aaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcata 23839055  T
Q  287 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||||||| ||||| |||||||    
T  23839054 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgt 23838980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 77 - 362
Target Start/End: Original strand, 10986170 - 10986454
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattga 175  Q
    ||||||||  ||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  10986170 ttctgcaattctaaggtaagggtgagactatctttcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaattga 10986269  T
Q  176 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 275  Q
    |||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||    
T  10986270 gggttagggtttgatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttg 10986368  T
Q  276 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
     |||||||||||||||||||| ||||| ||  |||||||||||||||||||  | |||||||||||||| ||| ||||| |||||||    
T  10986369 ttgtgatcataaattgattga-aattacgattgattggatgaattgatgaagatttgtatgatggtggagtgatctgtatttgttgt 10986454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 88 - 362
Target Start/End: Complemental strand, 4477912 - 4477639
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggtt 186  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  4477912 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtt 4477813  T
Q  187 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 286  Q
    |||||||||||||| |||| |||||||| | |||||| ||||||||||||||| ||||||| |||||||||||||||||||| |||||| ||||||||||    
T  4477812 tgatgatgattctg-aggggaatgggtattgatcatgctaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcata 4477714  T
Q  287 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    |||||||||| ||||||||  |||||||||| ||||| ||  | |||||||||||||| ||| ||||| |||||||    
T  4477713 aattgattga-aattatgattgattggatgatttgataaagatttgtatgatggtggagtgatctgtatttgttgt 4477639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 77 - 348
Target Start/End: Complemental strand, 18800503 - 18800233
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagata-aattga 175  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  18800503 ttctgcaaaactaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattga 18800404  T
Q  176 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 275  Q
    ||||||||||||||||||||||||| |||| |||| ||||| |||||||||||||||||||||| | ||||||| ||||||| |||||||||| ||||||    
T  18800403 gggttagggtttgatgatgattctggaggg-aatgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatctatattgttg 18800305  T
Q  276 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatga 348  Q
     |||||||| ||||||||||| || ||| |  ||||||||||||||||||| ||  |||||||||||||||||    
T  18800304 ttgtgatcacaaattgattga-aaatataattgattggatgaattgatgaagtttggtatgatggtggaatga 18800233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 90 - 354
Target Start/End: Original strand, 21565214 - 21565477
Alignment:
Q  90 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 187  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||| | |||||| ||||||||||||||||    
T  21565214 aggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttg-aggataaaattgagggttagggttt 21565312  T
Q  188 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 287  Q
    |||||||||||| ||||| |||||||||| |||||||||||| ||||||||| | | |||| |||||||| ||||||||||  |||||||||||||||||    
T  21565313 gatgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcataa 21565411  T
Q  288 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgta 354  Q
    ||||||||| || ||| |  ||||||||||||||||||| || |||||||||||||||||| |||||    
T  21565412 attgattga-aaatataattgattggatgaattgatgaagttctgtatgatggtggaatgatctgta 21565477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 930085 - 930229
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 176  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||| || ||||||||||    
T  930085 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgtatagttttgaaaaataaattgag 930184  T
Q  177 ggttagggtttgatgatgattctgaagggaaatgggtaataatcat 222  Q
    |||||||||||||||||| |||||||||| |||||||||| |||||    
T  930185 ggttagggtttgatgatgtttctgaaggg-aatgggtaatgatcat 930229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 77 - 296
Target Start/End: Complemental strand, 12168428 - 12168212
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 176  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  12168428 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 12168330  T
Q  177 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 276  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  12168329 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 12168233  T
Q  277 tgtgat-cataaattgattga 296  Q
    ||| || ||| ||||||||||    
T  12168232 tgtaatccatgaattgattga 12168212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 77 - 296
Target Start/End: Complemental strand, 19287337 - 19287121
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 176  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  19287337 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 19287239  T
Q  177 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 276  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19287238 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19287142  T
Q  277 tgtgat-cataaattgattga 296  Q
    ||| || ||| ||||||||||    
T  19287141 tgtaatccatgaattgattga 19287121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 77 - 296
Target Start/End: Original strand, 19785859 - 19786075
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 176  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| |||||||||||| ||||| |||     
T  19785859 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctagttgaatagttttggaaaataaaatgaa 19785957  T
Q  177 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 276  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19785958 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19786054  T
Q  277 tgtgat-cataaattgattga 296  Q
    ||| || ||| ||||||||||    
T  19786055 tgtaatccatgaattgattga 19786075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 77 - 296
Target Start/End: Complemental strand, 19878521 - 19878305
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 176  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  19878521 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 19878423  T
Q  177 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 276  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19878422 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19878326  T
Q  277 tgtgat-cataaattgattga 296  Q
    ||| || ||| ||||||||||    
T  19878325 tgtaatccatgaattgattga 19878305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 77 - 296
Target Start/End: Complemental strand, 19884297 - 19884081
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 176  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  19884297 ttctgcaaaactaaggttagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 19884199  T
Q  177 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 276  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19884198 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19884102  T
Q  277 tgtgat-cataaattgattga 296  Q
    ||| || ||| ||||||||||    
T  19884101 tgtaatccatgaattgattga 19884081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 87 - 276
Target Start/End: Original strand, 34639986 - 34640173
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 186  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||   ||   ||||||||    
T  34639986 ctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaatagttttggaaaataataagaaaattagggtt 34640085  T
Q  187 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 276  Q
    |||||||| |||||| ||  |||| ||||  || |||||| || | |   ||| ||| ||| ||||||||||||||||| ||||||||||    
T  34640086 tgatgatggttctgatgg--aatgagtaaagatgatgttagttttctctgaatttaacgttaagaatgaaaacttaatccatgttgttgc 34640173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 87 - 276
Target Start/End: Original strand, 34646660 - 34646847
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 186  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||| ||||   ||   ||||||||    
T  34646660 ctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaataattttggaaaataataagaaaattagggtt 34646759  T
Q  187 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 276  Q
    |||||||| |||||| ||  |||| ||||  || |||||| || | |   ||| ||| ||| ||||||||||||||||| ||||||||||    
T  34646760 tgatgatggttctgatgg--aatgagtaaagatgatgttagttttctctgaatttaacgttaagaatgaaaacttaatccatgttgttgc 34646847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 25469704 - 25469816
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 186  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||| || ||||||||| ||||  |||   ||||||||    
T  25469704 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaaataatatgaaaattagggtt 25469801  T
Q  187 tgatgatgattctga 201  Q
    ||||||| |||||||    
T  25469802 tgatgataattctga 25469816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 24512833 - 24512899
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 143  Q
    ||||||||| ||||||| |||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  24512833 ttctgcaaatctaaggtgagggtgagactatctctcaataatcatagtatataatttctgaaaattg 24512899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 284
Target Start/End: Complemental strand, 9187550 - 9187352
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagat--aaattgagggttaggg 184  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||| ||||| || ||||||| || ||| | ||| ||  |||||| |  ||||||    
T  9187550 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaaatagatctaattgaattgttcttgaatataaaaattgggaattaggg 9187451  T
Q  185 tttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatca 284  Q
     |||||| ||||| |||| ||||    |||| ||||||||| | | ||||||||| || ||||||||||||   ||||||||||  ||||| ||||||||    
T  9187450 -ttgatgctgattttgaaaggaatgatgtaagaatcatgtttaatgtgttgtaatttagtgttcagaatgatttcttaatctataatgttgttgtgatca 9187352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 25397228 - 25397172
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 144  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  25397228 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 25397172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 19471335 - 19471391
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 144  Q
    ||||||||||||||| ||| |||||||| |||||||| ||||||||||| |||||||    
T  19471335 taaggtaagggtgaggctacctctcgatgatcataatatataatttctggaaattga 19471391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 25348542 - 25348486
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 144  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  25348542 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 25348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 87 - 171
Target Start/End: Complemental strand, 31252478 - 31252394
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 171  Q
    ||||||||||||||||| ||||| |  || || ||||| ||||||||||||||||| | ||||||| |||||| | |||||||||    
T  31252478 ctaaggtaagggtgagattatcttttaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaa 31252394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 25598697 - 25598643
Alignment:
Q  90 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 144  Q
    ||||||||||||||||| ||||| || |||||||| |||| ||||||||||||||    
T  25598697 aggtaagggtgagactaactctcaatgatcataatatatattttctgaaaattga 25598643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 90 - 362
Target Start/End: Original strand, 8727735 - 8728007
Alignment:
Q  90 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttg 188  Q
    |||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8727735 aggtaagggtgagattatccctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 8727834  T
Q  189 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaa 288  Q
    | ||||||||||| ||| | |||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  8727835 acgatgattctgaggggta-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcataaa 8727933  T
Q  289 ttgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8727934 ttgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgt 8728007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 87 - 362
Target Start/End: Complemental strand, 44477678 - 44477405
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 186  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44477678 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 44477579  T
Q  187 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 286  Q
    ||||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  44477578 tgatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 44477480  T
Q  287 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||||||| ||||| |||||||    
T  44477479 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgt 44477405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 87 - 362
Target Start/End: Complemental strand, 44492836 - 44492563
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 186  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44492836 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 44492737  T
Q  187 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 286  Q
    ||||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  44492736 tgatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 44492638  T
Q  287 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||||||| ||||| |||||||    
T  44492637 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgt 44492563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 77 - 361
Target Start/End: Complemental strand, 23866680 - 23866396
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 176  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  23866680 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 23866582  T
Q  177 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattct-gttgtaatataatgttcagaatgaaaacttaatctatgttgttg 275  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||||  ||||||||||| ||||||||    
T  23866581 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct-tgttgttg 23866483  T
Q  276 ctgtgatcataaattgattgagaa-ttatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttg 361  Q
    || ||||| |||| |||||  ||| ||||||| ||||||||||||||||||||||||||||||||||||||| | |||| |||||||    
T  23866482 ctctgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaataatctgtgattgttg 23866396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 179 - 362
Target Start/End: Original strand, 27940946 - 27941127
Alignment:
Q  179 ttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctg 278  Q
    ||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||| |||||||||||||||||| |||||||||  ||||| |     
T  27940946 ttagggtttgatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaatttaatctatactgttgtta 27941044  T
Q  279 tgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    |||||||||||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||| ||| || || |||||||    
T  27941045 tgatcataaattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggagtgatctatatttgttgt 27941127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 77 - 296
Target Start/End: Complemental strand, 17054656 - 17054440
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 176  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||     
T  17054656 ttctgcaaaaccaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataagatgaa 17054558  T
Q  177 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 276  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  17054557 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 17054461  T
Q  277 tgtgat-cataaattgattga 296  Q
    ||| || ||| ||||||||||    
T  17054460 tgtaatccatgaattgattga 17054440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 88 - 197
Target Start/End: Complemental strand, 18614327 - 18614217
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtt 186  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| | ||||| || ||| | |||||| ||||||||  ||||||||    
T  18614327 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatccaattgaattgttcttgaagataaaattgagaattagggtt 18614228  T
Q  187 tgatgatgatt 197  Q
    | ||| |||||    
T  18614227 ttatgctgatt 18614217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 23482053 - 23482117
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 152  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23482053 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23482117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 14056553 - 14056619
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 143  Q
    ||||||||| |||||||||||||||||||||||||| ||||| ||| | | ||| ||||||||||||    
T  14056553 ttctgcaaatctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 14056619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 39364975 - 39364919
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 144  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  39364975 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 39364919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 25112042 - 25111976
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 143  Q
    |||| |||| |||||||||||||||||||||||||| ||||| ||| | | ||| ||||||||||||    
T  25112042 ttctacaaatctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 25111976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 29643386 - 29643440
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 142  Q
    |||||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  29643386 taaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 29643440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 142
Target Start/End: Original strand, 24320670 - 24320725
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 142  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  24320670 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 24320725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 27940840 - 27940907
Alignment:
Q  76 attctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 143  Q
    ||||||||||||||||||||||||||| ||| |  || || || ||||| ||| ||||||||||||||    
T  27940840 attctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattg 27940907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 21931752 - 21931696
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 144  Q
    ||||||||||||||| ||| ||||| || || ||||| ||||| |||||||||||||    
T  21931752 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 21931696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 77 - 362
Target Start/End: Original strand, 740 - 1025
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattga 175  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  740 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaaaataaattga 839  T
Q  176 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 275  Q
    ||||||||||||||||| |||| |||||||||||||||||| |||||| |||| || |||||||||||||||||| || |||||||||||| ||||||||    
T  840 gggttagggtttgatgaggattatgaagggaaatgggtaatgatcatgataatactcttgtaatataatgttcaggataaaaacttaatct-tgttgttg 938  T
Q  276 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
     |||||||||||| ||||||| | ||||||| |||||||||||||||||||||||||||||||||||||| ||  ||| ||||||||    
T  939 atgtgatcataaactgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaaagatttgtgattgttgt 1025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 88 - 362
Target Start/End: Original strand, 19661454 - 19661726
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 187  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19661454 taaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 19661553  T
Q  188 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 287  Q
    ||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||| |||||||||||    
T  19661554 gatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcataa 19661652  T
Q  288 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    ||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||| ||| ||||| |||||||    
T  19661653 attgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggagtgatctgtatttgttgt 19661726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 88 - 362
Target Start/End: Complemental strand, 6483772 - 6483500
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 187  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6483772 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6483673  T
Q  188 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 287  Q
    |||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  6483672 gatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 6483574  T
Q  288 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    ||||||||| ||||||||  ||| |||||||||||||||  | |||||||||||||||||| ||||| |||||||    
T  6483573 attgattga-aattatgattgatgggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgt 6483500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 88 - 362
Target Start/End: Complemental strand, 6487239 - 6486967
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 187  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6487239 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6487140  T
Q  188 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 287  Q
    |||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  6487139 gatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 6487041  T
Q  288 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    ||||||||| ||||||||  ||| |||||||||||||||  | |||||||||||||||||| ||||| |||||||    
T  6487040 attgattga-aattatgattgatgggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgt 6486967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 77 - 354
Target Start/End: Complemental strand, 26583892 - 26583617
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 176  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  26583892 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgag 26583794  T
Q  177 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 276  Q
    |||||||| |||||||||||||||| |||||| ||||||| |||||||||| | ||||||||  | ||||||||||||||  | ||||||||  ||||||    
T  26583793 ggttagggcttgatgatgattctgaggggaaa-gggtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgc 26583695  T
Q  277 tgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgta 354  Q
    |||||||| || |||| |   |||||  |  | |||||||||||| |||| || |||||||||||||||||| |||||    
T  26583694 tgtgatcacaatttgaattgtaattagaattggttggatgaattggtgaaattttgtatgatggtggaatgatctgta 26583617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 90 - 354
Target Start/End: Original strand, 23089057 - 23089320
Alignment:
Q  90 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 187  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||| | |||||| ||||||||||||||||    
T  23089057 aggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttg-aggataaaattgagggttagggttt 23089155  T
Q  188 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 287  Q
    |||||||||||| ||||| |||||||||| |||||||||||| ||||||||| | | |||| |||||||| ||||||||||  |||||||||||||||||    
T  23089156 gatgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcataa 23089254  T
Q  288 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgta 354  Q
    ||||||||| || ||| |  ||||||||||||||||||| || |||||||||||||||||| |||||    
T  23089255 attgattga-aaatataattgattggatgaattgatgaagttctgtatgatggtggaatgatctgta 23089320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 90 - 354
Target Start/End: Complemental strand, 23879060 - 23878798
Alignment:
Q  90 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtttg 188  Q
    |||||||||||||||||||||||  |||| || || |||||||||  ||||||||||||||||| ||   ||| | ||| |||||||||||||||||| |    
T  23879060 aggtaagggtgagactatctctcattaataattatatataatttcgaaaaattgacctaattgcttaaccttg-aggattaaattgagggttagggtt-g 23878963  T
Q  189 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaa 288  Q
     |||||||||||| |||||  ||||||| |||||||||||| ||||||||| | ||||||||||||||| ||||||||||  ||||| ||||||||||||    
T  23878962 ttgatgattctgaggggaatggggtaatgatcatgttaattatgttgtaatgtgatgttcagaatgaaatcttaatctatactgttgttgtgatcataaa 23878863  T
Q  289 ttgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgta 354  Q
    |||||||| || ||  |  ||||||||||||||||||| || |||||||||||||||||| |||||    
T  23878862 ttgattga-aaatagaattgattggatgaattgatgaagttttgtatgatggtggaatgatctgta 23878798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 88 - 348
Target Start/End: Original strand, 23101463 - 23101722
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggt 185  Q
    |||||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||  ||   ||| | |||||| ||||||||||||||    
T  23101463 taaggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgtttaaccttg-aggataaaattgagggttagggt 23101561  T
Q  186 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 285  Q
    |||||||||||||||| ||||| |||||||| |||||||||||| ||||||||| | | |||| |||||||| ||||||||||  ||||| |||||||||    
T  23101562 ttgatgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgttgtgatcat 23101660  T
Q  286 aaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatga 348  Q
    ||||||||||| || ||| |  ||||||||||||| ||||| || ||||||||||||||||||    
T  23101661 aaattgattga-aaatataattgattggatgaattcatgaagttctgtatgatggtggaatga 23101722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 5706023 - 5706137
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaat-tgagggttagggt 185  Q
    ||||||||||||||||||||||||||  |||||||||||||||||| |||||| |||||||||||| |||||||| ||| |  ||| |||   |||||||    
T  5706023 ctaaggtaagggtgagactatctctcattaatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggt 5706121  T
Q  186 ttgatgatgattctga 201  Q
    ||||||||||||||||    
T  5706122 ttgatgatgattctga 5706137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 23265197 - 23265133
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 152  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23265197 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23265133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 23280265 - 23280201
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 152  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23280265 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23280201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 21908414 - 21908353
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaa 149  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| ||||    
T  21908414 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 21908353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 24661632 - 24661576
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 144  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  24661632 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 24661576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 142
Target Start/End: Complemental strand, 10632 - 10577
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 142  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  10632 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 10577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 77 - 268
Target Start/End: Original strand, 23168288 - 23168483
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagat----aaa 171  Q
    ||||||||  |||||||||||||| || ||||| ||  | |||||||| ||||||||||| |||||| | ||||| | |||||||| ||||||    |||    
T  23168288 ttctgcaattctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaaattaatctaatagaatagtttt-gaagataaaaaaa 23168386  T
Q  172 ttgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctat 268  Q
    |||||  ||||||| ||||| ||||| |||| | ||| | |||| | ||||||| | | ||||||||| | |||||||| ||||   ||||||||||    
T  23168387 ttgagaattagggtatgatgctgattttgaaagaaaaggtgtaagagtcatgtttaatgtgttgtaatttgatgttcagtatgatttcttaatctat 23168483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 77 - 268
Target Start/End: Original strand, 23579545 - 23579740
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagat----aaa 171  Q
    ||||||||  |||||||||||||| || ||||| ||  | |||||||| ||||||||||| |||||| | ||||| | |||||||| ||||||    |||    
T  23579545 ttctgcaattctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaaattaatctaatagaatagtttt-gaagataaaaaaa 23579643  T
Q  172 ttgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctat 268  Q
    |||||  ||||||| ||||| ||||| |||| | ||| | |||| | ||||||| | | ||||||||| | |||||||| ||||   ||||||||||    
T  23579644 ttgagaattagggtatgatgctgattttgaaagaaaaggtgtaagagtcatgtttaatgtgttgtaatttgatgttcagtatgatttcttaatctat 23579740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 142
Target Start/End: Original strand, 25180929 - 25180984
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 142  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  25180929 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 25180984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 159
Target Start/End: Complemental strand, 26885246 - 26885166
Alignment:
Q  78 tctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtt 159  Q
    |||||||  |||||||||||||| || ||||| || |||||| |||| ||||||||||||||||| | ||||| | ||||||    
T  26885246 tctgcaattctaaggtaagggtgggattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagtt 26885166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 90 - 362
Target Start/End: Original strand, 14398 - 14670
Alignment:
Q  90 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttg 188  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14398 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 14497  T
Q  189 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaa 288  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||| |||||||||||||||||||| ||||||||||||||||||    
T  14498 atgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttccgaatgaaaacttaatctatgctgttgctgtgatcataaa 14597  T
Q  289 ttgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
     ||||||| || |||||  |||||||| ||||||||||| |  ||||||||||||||||| ||||| |||||||    
T  14598 ctgattga-aaatatgattgattggataaattgatgaatattggtatgatggtggaatgatctgtatttgttgt 14670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 193; Significance: 1e-105; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 77 - 296
Target Start/End: Complemental strand, 111948 - 111728
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcatagttttggaagataaattga 175  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  111948 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaaattgacctaattgcatagttttggaagataaattga 111849  T
Q  176 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 275  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||    
T  111848 gggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctg 111749  T
Q  276 ctgtgatcataaattgattga 296  Q
    |||||||||||||||||||||    
T  111748 ctgtgatcataaattgattga 111728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 317 - 362
Target Start/End: Complemental strand, 111727 - 111682
Alignment:
Q  317 aattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    |||||||||||||||||||||||||||||||| |||||||||||||    
T  111727 aattgatgaatttgtgtatgatggtggaatgatctgtaattgttgt 111682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 188; Significance: 1e-102; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 88 - 362
Target Start/End: Original strand, 20437024 - 20437297
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggtt 186  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20437024 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 20437123  T
Q  187 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 286  Q
    |||||||||||||| |||| |||||||| | |||||||||||| ||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||    
T  20437124 tgatgatgattctg-aggggaatgggtattgatcatgttaattatgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcata 20437222  T
Q  287 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||||||| ||||| |||||||    
T  20437223 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgt 20437297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 77 - 296
Target Start/End: Complemental strand, 41112100 - 41111884
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 176  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||| || ||||  |||     
T  41112100 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttgaaaaataagatgaa 41112002  T
Q  177 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 276  Q
     |||||||||||||||||||||||| ||  |||| ||||  |   ||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  41112001 agttagggtttgatgatgattctgatgg--aatgagtaaagacggtgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 41111905  T
Q  277 tgtgat-cataaattgattga 296  Q
    ||| || ||| ||||||||||    
T  41111904 tgtaatccatgaattgattga 41111884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 32651627 - 32651563
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 152  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  32651627 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 32651563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 143
Target Start/End: Original strand, 19663517 - 19663572
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 143  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  19663517 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 19663572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 18712854 - 18712790
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 152  Q
    ||||||| ||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  18712854 taaggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 18712790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 20805376 - 20805320
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 144  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  20805376 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 20805320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 11158148 - 11158093
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 143  Q
    ||||||||||||||||||| ||||| || ||| |||| ||||||||||||||||||    
T  11158148 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 11158093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 10811785 - 10811839
Alignment:
Q  90 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 144  Q
    ||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  10811785 aggtaagggtgagactatctctcaataataatagtgtagaatttctgaaaattga 10811839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 142
Target Start/End: Original strand, 20851132 - 20851187
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 142  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  20851132 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20851187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 142
Target Start/End: Original strand, 20857759 - 20857814
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 142  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  20857759 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20857814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 142
Target Start/End: Complemental strand, 21706331 - 21706276
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 142  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  21706331 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21706276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 142
Target Start/End: Complemental strand, 21710873 - 21710818
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 142  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  21710873 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21710818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 87 - 362
Target Start/End: Original strand, 10195 - 10469
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggt 185  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  10195 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 10294  T
Q  186 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 285  Q
    ||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||    
T  10295 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcat 10393  T
Q  286 aaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    ||||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||| ||| ||||| |||||||    
T  10394 aaattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggagtgatctgtatttgttgt 10469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 87 - 362
Target Start/End: Original strand, 1525 - 1799
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggt 185  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  1525 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 1624  T
Q  186 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 285  Q
    ||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||    
T  1625 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcat 1723  T
Q  286 aaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    ||||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||| ||| ||||| |||||||    
T  1724 aaattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggagtgatctgtatttgttgt 1799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 172; Significance: 2e-92; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 77 - 362
Target Start/End: Original strand, 1887 - 2171
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcatagttttggaagataaattga 175  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||| ||||    
T  1887 ttctgcaaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttga 1986  T
Q  176 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 275  Q
    |||||||||||||||||||||| ||| ||  |||||||||| || ||||||||||| ||||||| ||||||||| |||||||||||||||  ||||||||    
T  1987 gggttagggtttgatgatgattttgatgg--aatgggtaatgattatgttaattctcttgtaatttaatgttcataatgaaaacttaatccttgttgttg 2084  T
Q  276 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    |||||||||||| |||||||| | | ||||| ||||| ||||||||||||||||||||| ||||||||||| | |||||| ||||||    
T  2085 ctgtgatcataacttgattgaaattgatgagtgattgtatgaattgatgaatttgtgtacgatggtggaataatctgtaaatgttgt 2171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 77 - 362
Target Start/End: Original strand, 8564 - 8848
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcatagttttggaagataaattga 175  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||| ||||    
T  8564 ttctgcaaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttga 8663  T
Q  176 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 275  Q
    |||||||||||||||||||||| ||| ||  |||||||||| || ||||||||||| ||||||| ||||||||| |||||||||||||||  ||||||||    
T  8664 gggttagggtttgatgatgattatgatgg--aatgggtaatgattatgttaattctcttgtaatttaatgttcaaaatgaaaacttaatccttgttgttg 8761  T
Q  276 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    |||||||||||| |||||||| | | || || ||||| ||||||||||||||||||||| ||||||||||| | |||||| ||||||    
T  8762 ctgtgatcataacttgattgaaattgataagtgattgtatgaattgatgaatttgtgtacgatggtggaataatctgtaaatgttgt 8848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 77 - 354
Target Start/End: Complemental strand, 11407 - 11131
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagata-aattga 175  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  11407 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattga 11308  T
Q  176 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 275  Q
    ||||||||||||||||||||||||| |||| |||| ||||| |||||||||||||||||||||| | ||||||| ||||||| ||||||| ||  |||||    
T  11307 gggttagggtttgatgatgattctggaggg-aatgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatccatactgttg 11209  T
Q  276 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgta 354  Q
    ||||||||| ||||||||||| || ||| |  ||||||||||||||||||| || |||||||||||||| ||| |||||    
T  11208 ctgtgatcacaaattgattga-aaatataattgattggatgaattgatgaagttttgtatgatggtggattgatctgta 11131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 157; Significance: 2e-83; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 77 - 361
Target Start/End: Complemental strand, 356 - 75
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 176  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  356 ttctgcaaaactaaggtaagggtgagactatctctcaataaccataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgag 258  T
Q  177 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 276  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||||||||| | ||||| |||  |||||||| |||| |||||||||||||| |||     
T  257 ggttagggtttgatgatgattctg-aggggaatgggtaatgatcatgttaattttcttgtattatggtgttcagattgaagacttaatctatgttattga 159  T
Q  277 tgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttg 361  Q
    ||||||||||||||| |||| ||||||||  | |||||| |||||||||||   ||||| |||||||| ||| ||||| ||||||    
T  158 tgtgatcataaattggttga-aattatgattggttggataaattgatgaataattgtataatggtggagtgatctgtatttgttg 75  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 153; Significance: 5e-81; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 76 - 362
Target Start/End: Complemental strand, 18236 - 17950
Alignment:
Q  76 attctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattg 174  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||| ||| |||| ||||||||    
T  18236 attctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcttagctttaggaaaataaattg 18137  T
Q  175 agggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctg-ttgtaatataatgttcagaatgaaaacttaatctatgttgt 273  Q
    ||||||| ||||| ||||||||||| | ||||||| ||||||  |||||||||||||| ||||||| | |||| |||||||||||||||| |||||||||    
T  18136 agggttaaggtttaatgatgattctaacgggaaat-ggtaatggtcatgttaattctgtttgtaatgtgatgtccagaatgaaaacttaacctatgttgt 18038  T
Q  274 tgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 362  Q
    |||||||||||| |||||||||| ||||  ||  |||||||| ||||||||||| | ||||||||||||  |||| |||||||||||||    
T  18037 tgctgtgatcatgaattgattga-aatttggattgattggataaattgatgaatatttgtatgatggtgtgatgatctgtaattgttgt 17950  T

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Target: scaffold0476 (Bit Score: 116; Significance: 6e-59; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 90 - 354
Target Start/End: Original strand, 3295 - 3559
Alignment:
Q  90 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 187  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||||  |||||| ||||||||||||||||    
T  3295 aggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttggg-gataaaattgagggttagggttt 3393  T
Q  188 gatgatgattctgaagggaaatgggtaat-aatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 286  Q
    |||||||||||||| ||||| |||||||| ||||||||||||| ||||||||| | ||||||||||||||| ||||||||||  |||||||||||||| |    
T  3394 gatgatgattctgaggggaa-tgggtaatgaatcatgttaattttgttgtaatgtgatgttcagaatgaaatcttaatctatactgttgctgtgatcaca 3492  T
Q  287 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgta 354  Q
    |||||||||| || ||| |  ||||||||||||||||||| || |||||||||||||||||| |||||    
T  3493 aattgattga-aaatataattgattggatgaattgatgaagttttgtatgatggtggaatgatctgta 3559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 77 - 284
Target Start/End: Complemental strand, 30923 - 30715
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattga 175  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  30923 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaggtaaaattga 30824  T
Q  176 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 275  Q
    || ||||||||||||||||||| ||| |||||  | ||||  |||||||||| | ||||||||  | |||| |||||||||  | ||||||||  |||||    
T  30823 ggattagggtttgatgatgattttgaggggaatggtgtaacgatcatgttaaatatgttgtaaagtgatgtgcagaatgaattcctaatctataatgttg 30724  T
Q  276 ctgtgatca 284  Q
     ||||||||    
T  30723 atgtgatca 30715  T

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Target: scaffold0077 (Bit Score: 109; Significance: 9e-55; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 90 - 348
Target Start/End: Original strand, 3624 - 3881
Alignment:
Q  90 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 187  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||| | |||||| ||||||||||||||||    
T  3624 aggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttg-aggataaaattgagggttagggttt 3722  T
Q  188 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 287  Q
    |||||||||||||| ||| | |||||||| |||||||||||| ||||||||| | |||||| |||||||| ||||||||||  ||||| |||||||||||    
T  3723 gatgatgattctgaggggga-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatactgttgttgtgatcataa 3821  T
Q  288 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatga 348  Q
    ||||||||| || ||| |  ||||||||||||||||||| || ||||||||||||||||||    
T  3822 attgattga-aaatataattgattggatgaattgatgaagttttgtatgatggtggaatga 3881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 247 - 362
Target Start/End: Complemental strand, 3558 - 3443
Alignment:
Q  247 tcagaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaat 346  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||| | |||||||||||||||||||||||||||||||||||||||    
T  3558 tcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaatttatgggtgattggatgaattgatgaatttgtgtatgatggtggaat 3459  T
Q  347 gagctgtaattgttgt 362  Q
    || |||||||||||||    
T  3458 gatctgtaattgttgt 3443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 86; Significance: 5e-41; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 82 - 278
Target Start/End: Original strand, 1727 - 1920
Alignment:
Q  82 caaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggtta 181  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||  ||||    
T  1727 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagtta 1825  T
Q  182 gggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctg 278  Q
    |||||||||||||||||||| ||  |||| ||||  || |||||| || | | | ||| ||||||| ||||||||| ||||||| ||| ||||||||    
T  1826 gggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgctgttgctg 1920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 82 - 278
Target Start/End: Original strand, 5750 - 5943
Alignment:
Q  82 caaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggtta 181  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||  ||||    
T  5750 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagtta 5848  T
Q  182 gggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctg 278  Q
    |||||||||||||||||||| ||  |||| ||||  || |||||| || | | | ||| ||||||| ||||||||| ||||||| ||| ||||||||    
T  5849 gggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgctgttgctg 5943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 76; Significance: 4e-35; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 991 - 904
Alignment:
Q  83 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataa 170  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  991 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataa 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 8136 - 8049
Alignment:
Q  83 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataa 170  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  8136 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataa 8049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 231 - 327
Target Start/End: Complemental strand, 901 - 806
Alignment:
Q  231 tgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaat 327  Q
    ||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||    
T  901 tgttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcataaattgattg-gaattatgagggattggataaattgatgaat 806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 231 - 327
Target Start/End: Complemental strand, 8046 - 7951
Alignment:
Q  231 tgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaat 327  Q
    ||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||    
T  8046 tgttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcataaattgattg-gaattatgagggattggataaattgatgaat 7951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 81 - 199
Target Start/End: Original strand, 45268 - 45386
Alignment:
Q  81 gcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaat-tgagggt 179  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||| ||| |  ||| |||   |    
T  45268 gcaaatctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaat 45366  T
Q  180 tagggtttgatgatgattct 199  Q
    ||||||||||||||||||||    
T  45367 tagggtttgatgatgattct 45386  T

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Target: scaffold0107 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 40521 - 40587
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 143  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  40521 ttctgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 40587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 16875 - 16811
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 152  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  16875 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 16811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 116951 - 116887
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 152  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  116951 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 116887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 17710 - 17643
Alignment:
Q  77 ttctgcaaaa-ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 143  Q
    |||||||||| |||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||    
T  17710 ttctgcaaaatctaaggtaagggtgagactatctctcaataaccataatgtataatttctgaaaattg 17643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 143
Target Start/End: Original strand, 34276 - 34331
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 143  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  34276 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 34331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 135539 - 135473
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 143  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  135539 ttctgaaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 135473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 8 - 72
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 152  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  8 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 72  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 22582 - 22646
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaat 141  Q
    ||||||||| | |||||||||||||||||||||||| ||||||||| | ||||||||||||||||    
T  22582 ttctgcaaatccaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaat 22646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 13687 - 13623
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 152  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  13687 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 13623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 101928 - 101992
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 152  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||| ||||||||||| |||||||    
T  101928 taaggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattg 101992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 1515 - 1453
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa 139  Q
    |||||||||| ||||||||||||||||||| ||||| || ||| |||| ||||||||||||||    
T  1515 ttctgcaaaattaaggtaagggtgagactaactctcaatgatcttaatgtataatttctgaaa 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 277
Target Start/End: Original strand, 23559 - 23760
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaaga-taaattga 175  Q
    ||||||||  |||||||||||||| || ||||| |  || |||||||| ||||||||||||||||| | ||||  | |||||| | |||||  |||||||    
T  23559 ttctgcaattctaaggtaagggtgggattatctttgaatgatcataatgtataatttctgaaaattaatctaaaagaatagttcttgaagacaaaattga 23658  T
Q  176 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 275  Q
    |  ||||||| ||||| ||||| |||| | |||   |||| ||||||||| | | ||||||||| | |||||||| ||||   ||||||||||  |||||    
T  23659 gaattagggtgtgatgctgattttgaaagaaaagatgtaagaatcatgtttaatgtgttgtaatttgatgttcagtatgatttcttaatctataatgttg 23758  T
Q  276 ct 277  Q
    ||    
T  23759 ct 23760  T

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Target: scaffold2054 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 77 - 176
Target Start/End: Complemental strand, 780 - 680
Alignment:
Q  77 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagataaattga 175  Q
    |||||||||||||||||||||||| || ||||| || || ||| |||| ||||||||||| |||||| ||||||  | |||||| | ||| |||||||||    
T  780 ttctgcaaaactaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaaattaacctaaaagaatagttcttgaaaataaattga 681  T
Q  176 g 176  Q
    |    
T  680 g 680  T

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Target: scaffold0609 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 87 - 171
Target Start/End: Original strand, 5857 - 5941
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 171  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||||| | ||||||| |||||| | |||||||||    
T  5857 ctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaa 5941  T

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Target: scaffold0317 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 88 - 207
Target Start/End: Complemental strand, 1441 - 1321
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtt 186  Q
    |||||||||||||||||||||| || || ||||| || |||||||| |||||||||| ||||||  || ||| | || ||| ||| ||||  ||||||||    
T  1441 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaattaaattgttcttgatgataaaactgagaattagggtt 1342  T
Q  187 tgatgatgattctgaagggaa 207  Q
    ||||| ||||| |||| ||||    
T  1341 tgatgctgattttgaaaggaa 1321  T

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Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 12352 - 12296
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 144  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  12352 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 12296  T

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Target: scaffold0790 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 5522 - 5487
Alignment:
Q  74 ttattctgcaaaactaaggtaagggtgagactatct 109  Q
    ||||||||||||||||||||||||||||||||||||    
T  5522 ttattctgcaaaactaaggtaagggtgagactatct 5487  T

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Target: scaffold0139 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 143
Target Start/End: Original strand, 14997 - 15052
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 143  Q
    ||||||||||||||||||| ||||| || ||| |||| ||||||||||||||||||    
T  14997 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 15052  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 78 - 159
Target Start/End: Original strand, 493019 - 493099
Alignment:
Q  78 tctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtt 159  Q
    |||||||  ||||||||||||||||| ||||| || |||||| |||| ||||||||||||||||| | ||||| | ||||||    
T  493019 tctgcaattctaaggtaagggtgagattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagtt 493099  T

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Target: scaffold0096 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 39503 - 39563
Alignment:
Q  84 aaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 144  Q
    |||| |||||||||||||| ||| ||||| || |||||||| ||||||||| |||||||||    
T  39503 aaacaaaggtaagggtgaggctaactctcaatgatcataatatataatttcagaaaattga 39563  T

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Target: scaffold0034 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 277
Target Start/End: Complemental strand, 73337 - 73149
Alignment:
Q  90 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtttg 188  Q
    ||||||||||| || ||||| || || |||||||| |||||||| |||||||| | ||||| | |||| | | |||||| ||||||||  ||||||| ||    
T  73337 aggtaagggtgggattatctttcaatgatcataatgtataatttatgaaaattaatctaataggatagctcttgaagataaaattgagaattagggtgtg 73238  T
Q  189 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgct 277  Q
    ||| ||||| |||| | ||  | |||| ||||||||| | | ||||||||| | |||||| | ||||   ||||||||||  |||||||    
T  73237 atgttgattttgaaagaaacggtgtaagaatcatgtttaatgtgttgtaatttgatgttccgtatgatttcttaatctataatgttgct 73149  T

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Target: scaffold0348 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 142
Target Start/End: Complemental strand, 9391 - 9336
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 142  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  9391 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 9336  T

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Target: scaffold0127 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 142
Target Start/End: Complemental strand, 10294 - 10239
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 142  Q
    ||||||||||||||||| |||||  | ||||||||||| | |||||||||||||||    
T  10294 ctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 10239  T

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Target: scaffold0023 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 142
Target Start/End: Complemental strand, 135493 - 135438
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 142  Q
    |||||||||| |||||| ||||| || ||| ||||||| |||||||||||||||||    
T  135493 ctaaggtaagcgtgagattatctttcaatagtcataatatataatttctgaaaatt 135438  T

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Target: scaffold1318 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 1913 - 1967
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 142  Q
    ||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  1913 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 1967  T

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Target: scaffold0453 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 171
Target Start/End: Original strand, 10550 - 10634
Alignment:
Q  87 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 171  Q
    |||||||||| ||| || ||||| || || ||| |||| ||||||||||||||||| | ||||| | |||||| | |||||||||    
T  10550 ctaaggtaagtgtgggattatctttcaatgatcttaatgtataatttctgaaaattaatctaatagaatagttcttgaagataaa 10634  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 2628 - 2684
Alignment:
Q  88 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 144  Q
    ||||||||||||||| ||| ||||| || || ||||| ||||| |||||||||||||    
T  2628 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 2684  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 102
Target Start/End: Original strand, 80293 - 80321
Alignment:
Q  74 ttattctgcaaaactaaggtaagggtgag 102  Q
    |||||||||||||||||||||||||||||    
T  80293 ttattctgcaaaactaaggtaagggtgag 80321  T

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Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 102
Target Start/End: Original strand, 100015 - 100043
Alignment:
Q  74 ttattctgcaaaactaaggtaagggtgag 102  Q
    |||||||||||||||||||||||||||||    
T  100015 ttattctgcaaaactaaggtaagggtgag 100043  T

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